CSPI01G12320 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G12320
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Protein yippee-like
Location	Chr1: 7779163 .. 7781835 (-)
RNA-Seq Expression	CSPI01G12320
Synteny	CSPI01G12320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAACGGAAACGGCTACTGGCAATTGGCATCTCAAAAAACTGACCACGCATGAGAAAGGCTTCAAGTTCGTTATTTTGATTATGATTATCTCTTTGACCCAGAGGAGGGGAATGATTTTTGTTTCTGTGAGAGCTTAGTTTAGTTTCTCAATTTGGGATTTCTAGGGTTTTAATGGGTAGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCCTACAGATGCCGCTTCTGTAACAACAATGTTGCTCTTGCCGATGACGTCCTCTCTCGAGTACTTTCATCTCTTCTCCTCTTCCCCTTCTTTATTTCCCCTCCCAATTCTCCCATACATCCTACAATTTTCTTTCTTCAATTTCCACCCGCAACTCCACTTTATTTGCTCCTTTCGAATTATTGCTTTCGATTGATTTGTCTTGTATTAGCGTCTGGGTTGCTGGTTTAATTCATATTTCGTTCGTATTTTATTCCAATTTTGCTGTTTGGGCCGTGTGTTGTTAATTGGAATCTCAAAGCCTATGTTGGTTGCATGCTTAATTTGTCTGTTGTAACTACTTGGCGTTAAACTAATGCTACTAAGTCTCAAGTGCTAAATTGGAATTATAGTTCCCACGATATTACGATTGATTTCGTATTATATCTTTCAGATTGTTAGCGGATGGTTGATCTTAACGCTGCTGTATATTGTCATAATGTTGTATTTGTAGCTCTCTTTTTTGGCATAATTCTATCGACTCACTTGCCCATTTTGATGAACTTTTATGGTTCTGTTTTTCTCCCAGACTTTCAATTGCAGCCAAGGGAGGGCGTATCTTTTCAGCAATGTGTGAGTTGCCCTGTTCTGATTTTTATTTTATTTTCATGTGCAGCTTTAACGTCTACTTTTTAAATGTCTTGTGGTAGTTCGGGCTTTTACCATCTCTTTTTAAGCAGGCTTCATAATTAAAAAATTACAGTAATTGTTAGTTATCCTCAATATTTTCATTTCTCCTCTTTTCTTGTGCCTTTCCGATACAATAATCGAATTCAATGACCTTACTTTGATCTGTTTCTGACCACAAGTCTACAATTTAACATATATTGAAATACTTTTACCTTTTGCCAGAGTGAATATAACATCTGGACCCAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACATTGTGGAAGATATCTTTTGTTGCATTTGCGGACAAATTCTTGGATGGAAATATGTAAATTTTCTCCACTCATTATCTTTGCAAAGTGATTTGGTTTCCACCATCTTTAATAGAACTGATGACTGTTCAGTAGTTGGAATCATCACGAACTGGCTCAATTGTTAAAGGAGGGAGTTATAACTCATTTAATTTTGGGGTTGTGTTATCAACTCTCTATCCCATGCATGTGTCAACTTTCAAAATTATAAGATTAAGACAATACACTGGAACTAGTTCTGGTGAGCAGAAGTTGGTAGATGGGGAAGGGAGGGAGGGAGAAATCTCTTGGAAGGAGCCGGCACATGCATAGCTCAGCTTTTAATATAATTTGTAGCATAAGAGAAGGAGTGCCTTCACTCAACTTCTACATTCCTAATTATGAATAATGAAAAGCATGACAGACAAACTACTGAATTCATGCTTAGTGCATATGTAATATTCATTTCTGAGGAGGACATATAGAAAACAATAATATACGTAATAAAAATATCACAAATGGCTGTAAATGCAATAAGGAAGGCAAGGTACAACACTCATGTCTGCGTGGCTGGTTGGTTGGTTGGCTGTCTGCTGGGCCTATCTCAACTTGAGCAGCTAAATAGGCAGGTTCAGATTTAAGCAGAAGTTAATATGCTGTTTGAAAGAAAAAAATCTATCTTTCAATTGTTAGCCACTACCAGACAGGGTTAGTTGAAAGCTTCTCCAATATATGCATGGGTATGAATGTGATAATACATTTCATCTGCGTGAATTCTGAAATAACATTAAACTAGAGTTGAAGTTGAAAATGGTGTAATTTATTATGGTTTGTATCTGAAAACATTTGTGGGTTTTTGTTTTACTGAATGAATTTTCTGTTGACTTATTGACTGGAGTATTAGTTTGGTAGATTGATGTTGCTGCATTTCAATAGGTAACTACACACGACAAATATCAAAAGTACAAGGAGGGGAAATTTGTTCTTGAGAGGTACACAGACATTTTCCTCATCTTTTCAAATACCACAAAGTTTTCTGTAAATATATAATTTGTCCTCAGTTTGTTTATACCTCTAACAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAACGGAGATGCTCATCCTGGTTCAAGCGATATGGAAAATCCTTAGTGAGTTTCTGCCATATTCTCTCAGAATGAGGAAATTGAAGCGTGCATGTCAAAGTGTTGTATGTAGAAACAATTATAGAGGCTGTAGAACTACTATTGAAATTCATGACCATAATCTATAATATCATAAGCTTATTCTAGAATGGTGTCTTGAATGCTCTATTCTCTCTCCCCTCCTACAATCCCTCTTCATACAGTACTAAGAACATCCCTGTAGATAGCTGATGGAACCAACAAAGATAATTTTGTTTCTAGTTTATTAAAAATGTATGTTTCACAATCCCATTTGTAAAAAACAGTATATGAACTCATTCTTATATACCAAACAACAAATTTTACTCT

mRNA sequence

AGAAAACGGAAACGGCTACTGGCAATTGGCATCTCAAAAAACTGACCACGCATGAGAAAGGCTTCAAGTTCGTTATTTTGATTATGATTATCTCTTTGACCCAGAGGAGGGGAATGATTTTTGTTTCTGTGAGAGCTTAGTTTAGTTTCTCAATTTGGGATTTCTAGGGTTTTAATGGGTAGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCCTACAGATGCCGCTTCTGTAACAACAATGTTGCTCTTGCCGATGACGTCCTCTCTCGAACTTTCAATTGCAGCCAAGGGAGGGCGTATCTTTTCAGCAATGTAGTGAATATAACATCTGGACCCAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACATTGTGGAAGATATCTTTTGTTGCATTTGCGGACAAATTCTTGGATGGAAATATGTAACTACACACGACAAATATCAAAAGTACAAGGAGGGGAAATTTGTTCTTGAGAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAACGGAGATGCTCATCCTGGTTCAAGCGATATGGAAAATCCTTAGTGAGTTTCTGCCATATTCTCTCAGAATGAGGAAATTGAAGCGTGCATGTCAAAGTGTTGTATGTAGAAACAATTATAGAGGCTGTAGAACTACTATTGAAATTCATGACCATAATCTATAATATCATAAGCTTATTCTAGAATGGTGTCTTGAATGCTCTATTCTCTCTCCCCTCCTACAATCCCTCTTCATACAGTACTAAGAACATCCCTGTAGATAGCTGATGGAACCAACAAAGATAATTTTGTTTCTAGTTTATTAAAAATGTATGTTTCACAATCCCATTTGTAAAAAACAGTATATGAACTCATTCTTATATACCAAACAACAAATTTTACTCT

Coding sequence (CDS)

ATGGGTAGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCCTACAGATGCCGCTTCTGTAACAACAATGTTGCTCTTGCCGATGACGTCCTCTCTCGAACTTTCAATTGCAGCCAAGGGAGGGCGTATCTTTTCAGCAATGTAGTGAATATAACATCTGGACCCAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACATTGTGGAAGATATCTTTTGTTGCATTTGCGGACAAATTCTTGGATGGAAATATGTAACTACACACGACAAATATCAAAAGTACAAGGAGGGGAAATTTGTTCTTGAGAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAACGGAGATGCTCATCCTGGTTCAAGCGATATGGAAAATCCTTAG

Protein sequence

MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLMLSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPGSSDMENP*

Homology

[Close]

BLAST of CSPI01G12320 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.5e-43
Identity = 81/128 (63.28%), Postives = 101/128 (78.91%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+F VELEGRSYRCRFC  ++AL DD++SR+F+C +G+AYLF+  VNI+ GP EERLM
Sbjct: 1   MGRIFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEE--MMEDLNGDAH 120
           LSGMH V DIFCC CGQ +GWKY + H+K QKYKEGKFVLER RIV+E  +  ++  D H
Sbjct: 61  LSGMHTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIVDEIDLSTEVYIDTH 120

Query: 121 PGSSDMEN 127
             +SD E+
Sbjct: 121 GSTSDTED 128

[Close]

BLAST of CSPI01G12320 vs. ExPASy Swiss-Prot
Match: Q9SR97 (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 6.6e-34
Identity = 57/106 (53.77%), Postives = 83/106 (78.30%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+F+++LEG  Y C++C  + A+ +D++S++F+C  GRAYLF NVVN+T G KE R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIV 107
           ++G H V DIFC  CG ++GWKY   +DK QKYKEGKF+LER++++
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVL 106

[Close]

BLAST of CSPI01G12320 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 8.7e-34
Identity = 60/105 (57.14%), Postives = 84/105 (80.00%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+F++ LEG+ Y C+ C  ++AL+++++S++F+C  G+AYLFS VVN+TSG  E R+M
Sbjct: 1   MGRLFVLTLEGKIYSCKHCGTHLALSENIVSKSFHCKHGKAYLFSKVVNVTSGEIENRMM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRI 106
           ++GMH V DIFC  CG I+GWKY T H+K QKYKEGK VLER++I
Sbjct: 61  MTGMHTVADIFCVCCGSIVGWKYETAHEKSQKYKEGKSVLERFKI 105

[Close]

BLAST of CSPI01G12320 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-32
Identity = 60/105 (57.14%), Postives = 80/105 (76.19%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+FLV LEG+SY C+ C  N+AL DDV+S++F    G+AYLFS VVN+ +G KE+R+M
Sbjct: 1   MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRI 106
           ++GMH V DI+C  CG  +GWKY    +K QKYKEGK VLER+++
Sbjct: 61  MTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKV 105

[Close]

BLAST of CSPI01G12320 vs. ExPASy Swiss-Prot
Match: Q9LY56 (Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.2e-31
Identity = 57/105 (54.29%), Postives = 79/105 (75.24%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGRVF+V+LEG  Y C+ C  +++   D++S++F C  GRAYLF+NVVN++ G KE+R+M
Sbjct: 1   MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRI 106
           ++G+H V DIFC  CG  +GWKY   H+K QKYKEGK VLE ++I
Sbjct: 61  ITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKYKEGKSVLELYKI 105

[Close]

BLAST of CSPI01G12320 vs. ExPASy TrEMBL
Match: A0A0A0LRZ0 (Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_1G075050 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 7.8e-70
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM
Sbjct: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG
Sbjct: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120

Query: 121 SSDMENP 128
           SSDMENP
Sbjct: 121 SSDMENP 127

[Close]

BLAST of CSPI01G12320 vs. ExPASy TrEMBL
Match: A0A1S3B6L5 (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103486583 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.0e-69
Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+FLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM
Sbjct: 1   MGRIFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG
Sbjct: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120

Query: 121 SSDMENP 128
           SSDMENP
Sbjct: 121 SSDMENP 127

[Close]

BLAST of CSPI01G12320 vs. ExPASy TrEMBL
Match: A0A6J1KNK6 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111495802 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.1e-68
Identity = 125/127 (98.43%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM
Sbjct: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           LSGMH VEDIFCC CGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG
Sbjct: 61  LSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120

Query: 121 SSDMENP 128
           SSDMENP
Sbjct: 121 SSDMENP 127

[Close]

BLAST of CSPI01G12320 vs. ExPASy TrEMBL
Match: A0A6J1EGK2 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111434136 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.1e-68
Identity = 125/127 (98.43%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM
Sbjct: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           LSGMH VEDIFCC CGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG
Sbjct: 61  LSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120

Query: 121 SSDMENP 128
           SSDMENP
Sbjct: 121 SSDMENP 127

[Close]

BLAST of CSPI01G12320 vs. ExPASy TrEMBL
Match: A0A6J1CHK2 (Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111010960 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 6.2e-67
Identity = 121/127 (95.28%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNC QGRAYLFSNVVN+T+GPKEERLM
Sbjct: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           LSGMH VEDIFCC CGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLN DAHPG
Sbjct: 61  LSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNADAHPG 120

Query: 121 SSDMENP 128
           SSDMENP
Sbjct: 121 SSDMENP 127

[Close]

BLAST of CSPI01G12320 vs. NCBI nr
Match: XP_004146613.1 (protein yippee-like At5g53940 isoform X1 [Cucumis sativus] >KGN64700.1 hypothetical protein Csa_013910 [Cucumis sativus])

HSP 1 Score: 272.7 bits (696), Expect = 1.6e-69
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM
Sbjct: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG
Sbjct: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120

Query: 121 SSDMENP 128
           SSDMENP
Sbjct: 121 SSDMENP 127

[Close]

BLAST of CSPI01G12320 vs. NCBI nr
Match: XP_008442812.1 (PREDICTED: protein yippee-like At5g53940 [Cucumis melo])

HSP 1 Score: 272.3 bits (695), Expect = 2.1e-69
Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+FLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM
Sbjct: 1   MGRIFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG
Sbjct: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120

Query: 121 SSDMENP 128
           SSDMENP
Sbjct: 121 SSDMENP 127

[Close]

BLAST of CSPI01G12320 vs. NCBI nr
Match: XP_022927222.1 (protein yippee-like At5g53940 [Cucurbita moschata] >XP_023001759.1 protein yippee-like At5g53940 [Cucurbita maxima] >XP_023519081.1 protein yippee-like At5g53940 [Cucurbita pepo subsp. pepo] >KAG7019603.1 Protein yippee-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268.9 bits (686), Expect = 2.3e-68
Identity = 125/127 (98.43%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM
Sbjct: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           LSGMH VEDIFCC CGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG
Sbjct: 61  LSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120

Query: 121 SSDMENP 128
           SSDMENP
Sbjct: 121 SSDMENP 127

[Close]

BLAST of CSPI01G12320 vs. NCBI nr
Match: XP_022140248.1 (protein yippee-like At5g53940 [Momordica charantia])

HSP 1 Score: 263.1 bits (671), Expect = 1.3e-66
Identity = 121/127 (95.28%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNC QGRAYLFSNVVN+T+GPKEERLM
Sbjct: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           LSGMH VEDIFCC CGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLN DAHPG
Sbjct: 61  LSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNADAHPG 120

Query: 121 SSDMENP 128
           SSDMENP
Sbjct: 121 SSDMENP 127

[Close]

BLAST of CSPI01G12320 vs. NCBI nr
Match: XP_038893524.1 (protein yippee-like At5g53940 [Benincasa hispida])

HSP 1 Score: 259.2 bits (661), Expect = 1.8e-65
Identity = 120/127 (94.49%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQG+AYLFSNVVNITSGPKEERLM
Sbjct: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGKAYLFSNVVNITSGPKEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPG 120
           LSGMH VEDIFCC CGQILGWKYVTTHDKYQ+YKEGKFVLERW IVEEMMEDLNGDAH G
Sbjct: 61  LSGMHTVEDIFCCCCGQILGWKYVTTHDKYQRYKEGKFVLERWTIVEEMMEDLNGDAHTG 120

Query: 121 SSDMENP 128
            SDMENP
Sbjct: 121 PSDMENP 127

[Close]

BLAST of CSPI01G12320 vs. TAIR 10
Match: AT5G53940.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 175.6 bits (444), Expect = 2.5e-44
Identity = 81/128 (63.28%), Postives = 101/128 (78.91%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+F VELEGRSYRCRFC  ++AL DD++SR+F+C +G+AYLF+  VNI+ GP EERLM
Sbjct: 1   MGRIFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEE--MMEDLNGDAH 120
           LSGMH V DIFCC CGQ +GWKY + H+K QKYKEGKFVLER RIV+E  +  ++  D H
Sbjct: 61  LSGMHTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIVDEIDLSTEVYIDTH 120

Query: 121 PGSSDMEN 127
             +SD E+
Sbjct: 121 GSTSDTED 128

[Close]

BLAST of CSPI01G12320 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 144.8 bits (364), Expect = 4.7e-35
Identity = 57/106 (53.77%), Postives = 83/106 (78.30%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+F+++LEG  Y C++C  + A+ +D++S++F+C  GRAYLF NVVN+T G KE R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIV 107
           ++G H V DIFC  CG ++GWKY   +DK QKYKEGKF+LER++++
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVL 106

[Close]

BLAST of CSPI01G12320 vs. TAIR 10
Match: AT3G08990.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 144.8 bits (364), Expect = 4.7e-35
Identity = 57/106 (53.77%), Postives = 83/106 (78.30%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+F+++LEG  Y C++C  + A+ +D++S++F+C  GRAYLF NVVN+T G KE R+M
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIV 107
           ++G H V DIFC  CG ++GWKY   +DK QKYKEGKF+LER++++
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVL 106

[Close]

BLAST of CSPI01G12320 vs. TAIR 10
Match: AT3G11230.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 139.8 bits (351), Expect = 1.5e-33
Identity = 60/105 (57.14%), Postives = 80/105 (76.19%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+FLV LEG+SY C+ C  N+AL DDV+S++F    G+AYLFS VVN+ +G KE+R+M
Sbjct: 1   MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 60

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRI 106
           ++GMH V DI+C  CG  +GWKY    +K QKYKEGK VLER+++
Sbjct: 61  MTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKV 105

[Close]

BLAST of CSPI01G12320 vs. TAIR 10
Match: AT3G11230.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 139.8 bits (351), Expect = 1.5e-33
Identity = 60/105 (57.14%), Postives = 80/105 (76.19%), Query Frame = 0


Query: 1   MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLM 60
           MGR+FLV LEG+SY C+ C  N+AL DDV+S++F    G+AYLFS VVN+ +G KE+R+M
Sbjct: 34  MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 93

Query: 61  LSGMHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRI 106
           ++GMH V DI+C  CG  +GWKY    +K QKYKEGK VLER+++
Sbjct: 94  MTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKV 138

The following BLAST results are available for this feature:

BLAST of CSPI01G12320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN32	3.5e-43	63.28	Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 ...	[more]
Q9SR97	6.6e-34	53.77	Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 ...	[more]
P59234	8.7e-34	57.14	Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9C777	2.1e-32	57.14	Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 ...	[more]
Q9LY56	5.2e-31	54.29	Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 ...	[more]

BLAST of CSPI01G12320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRZ0	7.8e-70	100.00	Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_1G075050 PE=3 SV=1	[more]
A0A1S3B6L5	1.0e-69	99.21	Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103486583 PE=3 SV=1	[more]
A0A6J1KNK6	1.1e-68	98.43	Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111495802 PE=3 SV=1	[more]
A0A6J1EGK2	1.1e-68	98.43	Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111434136 PE=3 SV=1	[more]
A0A6J1CHK2	6.2e-67	95.28	Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111010960 PE=3 SV=1	[more]

BLAST of CSPI01G12320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146613.1	1.6e-69	100.00	protein yippee-like At5g53940 isoform X1 [Cucumis sativus] >KGN64700.1 hypotheti...	[more]
XP_008442812.1	2.1e-69	99.21	PREDICTED: protein yippee-like At5g53940 [Cucumis melo]	[more]
XP_022927222.1	2.3e-68	98.43	protein yippee-like At5g53940 [Cucurbita moschata] >XP_023001759.1 protein yippe...	[more]
XP_022140248.1	1.3e-66	95.28	protein yippee-like At5g53940 [Momordica charantia]	[more]
XP_038893524.1	1.8e-65	94.49	protein yippee-like At5g53940 [Benincasa hispida]	[more]

BLAST of CSPI01G12320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53940.1	2.5e-44	63.28	Yippee family putative zinc-binding protein	[more]
AT3G08990.1	4.7e-35	53.77	Yippee family putative zinc-binding protein	[more]
AT3G08990.2	4.7e-35	53.77	Yippee family putative zinc-binding protein	[more]
AT3G11230.1	1.5e-33	57.14	Yippee family putative zinc-binding protein	[more]
AT3G11230.2	1.5e-33	57.14	Yippee family putative zinc-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004910	Yippee/Mis18/Cereblon	PFAM	PF03226	Yippee-Mis18	coord: 14..105 e-value: 1.0E-12 score: 48.1
IPR039058	Yippee family	PANTHER	PTHR13848	PROTEIN YIPPEE-LIKE CG15309-RELATED	coord: 1..118
None	No IPR available	PANTHER	PTHR13848:SF74	PROTEIN YIPPEE-LIKE	coord: 1..118
IPR034751	Yippee domain	PROSITE	PS51792	YIPPEE	coord: 12..109 score: 45.081284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G12320.1	CSPI01G12320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000151	ubiquitin ligase complex
molecular_function	GO:0046872	metal ion binding