CSPI01G06470 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAAAATCAAAACAAAAGGCTTCTCATTTTATAACCATCCATCCATCTTTTTATTGAACTTTTTTTCTTCTTTTTTAACCTTTCAATCTCTCTCTCTCTCTCTCTTTCTCTTTCTCTCAATAATGGAGATGAATGAAGATTTGGGATTTGGTGAAAATCCATTTAATGGAAGCTGCTTGAAAAGGCATTGTTCTTCACATTTGATGATGGAAACAAATAGGACGATGATGAGAAGATCAGAAGGTGATAATAATGATCATGAAGATCATGAGTCAAATGGTTCTTGTGGTAATTTGATCCATAGAGAAATTGTGTTCCCATCTACTATGATCACTACTAGCCACACCCCTACCAACAACAACAATTCTAATGTCTTTTCCTCCCCCAATTCCGCCTCTTGTTATAGCAACGACAACGTTTTGGACGTCGTTGAAGTTCTCGACGTTCACCGTCATCATCATCTTACCGTAATGGCTGAGAGGAAGCTACGAAGAATGATATCAAATCGGGAATCCGCACGAAGGTCAAGGATGAGAAAGAAGAAACAAATCGAAGAGTTGCAGTACCAGGCAAGATTTTCAAATCTCTACATATATAATAATTGCAAAAACCAAATATTATAAACGTCTGTATAAGTTCGAGAGTTCAATTTTTCACCCCATGCACACTTCTCAGATGGTTATTTCGATAGCCATAATTCGTGTTTTATTGTGTAGTTGTTATGATTAAGATGTCATAAATATAGAGATATAGATTGAAATTTAATACGTGTCAGGTAGGACAGTTGGAGGTTTCGAATCGACAATTATCGGAGAAGTTGATACAAGTGGTGGAATGCAACCAACAAATCCTGCATGAGAATGCAGAGCTAAAACGAAAAGTATCATCACTTCAGATTATTCTAACTGATTTCTTGACGCCATTGAGAAACTGTGAAGATGCTTTTGGGAACTCCATTATTAAAAATAATCGAAGAGCAGCAGCTGAACCAAATTCTTCCTAGCTCTCTCTCTCTCTCTCTTATACAACTTTAATATACCATGAAGATGACGAAGAAGAAGAAGAGAAGATGAACAAATATCATAATATATATATGTGTGTATTTTTCATCATGATCATTAGCTTAGCTACTTTTCTAAATCCAAATTATCCCATCAGGA TCAAAATCAAAACAAAAGGCTTCTCATTTTATAACCATCCATCCATCTTTTTATTGAACTTTTTTTCTTCTTTTTTAACCTTTCAATCTCTCTCTCTCTCTCTCTTTCTCTTTCTCTCAATAATGGAGATGAATGAAGATTTGGGATTTGGTGAAAATCCATTTAATGGAAGCTGCTTGAAAAGGCATTGTTCTTCACATTTGATGATGGAAACAAATAGGACGATGATGAGAAGATCAGAAGGTGATAATAATGATCATGAAGATCATGAGTCAAATGGTTCTTGTGGTAATTTGATCCATAGAGAAATTGTGTTCCCATCTACTATGATCACTACTAGCCACACCCCTACCAACAACAACAATTCTAATGTCTTTTCCTCCCCCAATTCCGCCTCTTGTTATAGCAACGACAACGTTTTGGACGTCGTTGAAGTTCTCGACGTTCACCGTCATCATCATCTTACCGTAATGGCTGAGAGGAAGCTACGAAGAATGATATCAAATCGGGAATCCGCACGAAGGTCAAGGATGAGAAAGAAGAAACAAATCGAAGAGTTGCAGTACCAGGTAGGACAGTTGGAGGTTTCGAATCGACAATTATCGGAGAAGTTGATACAAGTGGTGGAATGCAACCAACAAATCCTGCATGAGAATGCAGAGCTAAAACGAAAAGTATCATCACTTCAGATTATTCTAACTGATTTCTTGACGCCATTGAGAAACTGTGAAGATGCTTTTGGGAACTCCATTATTAAAAATAATCGAAGAGCAGCAGCTGAACCAAATTCTTCCTAGCTCTCTCTCTCTCTCTCTTATACAACTTTAATATACCATGAAGATGACGAAGAAGAAGAAGAGAAGATGAACAAATATCATAATATATATATGTGTGTATTTTTCATCATGATCATTAGCTTAGCTACTTTTCTAAATCCAAATTATCCCATCAGGA ATGGAGATGAATGAAGATTTGGGATTTGGTGAAAATCCATTTAATGGAAGCTGCTTGAAAAGGCATTGTTCTTCACATTTGATGATGGAAACAAATAGGACGATGATGAGAAGATCAGAAGGTGATAATAATGATCATGAAGATCATGAGTCAAATGGTTCTTGTGGTAATTTGATCCATAGAGAAATTGTGTTCCCATCTACTATGATCACTACTAGCCACACCCCTACCAACAACAACAATTCTAATGTCTTTTCCTCCCCCAATTCCGCCTCTTGTTATAGCAACGACAACGTTTTGGACGTCGTTGAAGTTCTCGACGTTCACCGTCATCATCATCTTACCGTAATGGCTGAGAGGAAGCTACGAAGAATGATATCAAATCGGGAATCCGCACGAAGGTCAAGGATGAGAAAGAAGAAACAAATCGAAGAGTTGCAGTACCAGGTAGGACAGTTGGAGGTTTCGAATCGACAATTATCGGAGAAGTTGATACAAGTGGTGGAATGCAACCAACAAATCCTGCATGAGAATGCAGAGCTAAAACGAAAAGTATCATCACTTCAGATTATTCTAACTGATTTCTTGACGCCATTGAGAAACTGTGAAGATGCTTTTGGGAACTCCATTATTAAAAATAATCGAAGAGCAGCAGCTGAACCAAATTCTTCCTAG MEMNEDLGFGENPFNGSCLKRHCSSHLMMETNRTMMRRSEGDNNDHEDHESNGSCGNLIHREIVFPSTMITTSHTPTNNNNSNVFSSPNSASCYSNDNVLDVVEVLDVHRHHHLTVMAERKLRRMISNRESARRSRMRKKKQIEELQYQVGQLEVSNRQLSEKLIQVVECNQQILHENAELKRKVSSLQIILTDFLTPLRNCEDAFGNSIIKNNRRAAAEPNSS* Homology
BLAST of CSPI01G06470 vs. ExPASy Swiss-Prot
Match: Q9FMC2 (Basic leucine zipper 43 OS=Arabidopsis thaliana OX=3702 GN=BZIP43 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08 Identity = 50/133 (37.59%), Postives = 75/133 (56.39%), Query Frame = 0
BLAST of CSPI01G06470 vs. ExPASy Swiss-Prot
Match: Q9LQ65 (Basic leucine zipper 4 OS=Arabidopsis thaliana OX=3702 GN=BZIP4 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.4e-07 Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of CSPI01G06470 vs. ExPASy Swiss-Prot
Match: Q9CA46 (Basic leucine zipper 8 OS=Arabidopsis thaliana OX=3702 GN=BZIP8 PE=1 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 7.1e-07 Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of CSPI01G06470 vs. ExPASy Swiss-Prot
Match: Q9SI15 (bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.3e-05 Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 0
BLAST of CSPI01G06470 vs. ExPASy Swiss-Prot
Match: Q9LZP8 (bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 3.9e-05 Identity = 36/98 (36.73%), Postives = 59/98 (60.20%), Query Frame = 0
BLAST of CSPI01G06470 vs. ExPASy TrEMBL
Match: A0A1S3C064 (light-inducible protein CPRF3-like OS=Cucumis melo OX=3656 GN=LOC103495089 PE=4 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 2.2e-107 Identity = 218/227 (96.04%), Postives = 219/227 (96.48%), Query Frame = 0
BLAST of CSPI01G06470 vs. ExPASy TrEMBL
Match: A0A0A0LTK4 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G040010 PE=4 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 1.1e-74 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of CSPI01G06470 vs. ExPASy TrEMBL
Match: A0A5D3BIS8 (Light-inducible protein CPRF3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001670 PE=4 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 5.9e-65 Identity = 143/152 (94.08%), Postives = 144/152 (94.74%), Query Frame = 0
BLAST of CSPI01G06470 vs. ExPASy TrEMBL
Match: A0A6J1KFN2 (basic leucine zipper 43-like OS=Cucurbita maxima OX=3661 GN=LOC111495369 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 9.2e-58 Identity = 144/214 (67.29%), Postives = 156/214 (72.90%), Query Frame = 0
BLAST of CSPI01G06470 vs. ExPASy TrEMBL
Match: A0A6J1E709 (basic leucine zipper 43-like OS=Cucurbita moschata OX=3662 GN=LOC111431302 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 1.2e-57 Identity = 145/214 (67.76%), Postives = 156/214 (72.90%), Query Frame = 0
BLAST of CSPI01G06470 vs. NCBI nr
Match: XP_004137610.2 (transcriptional activator TAF-1 [Cucumis sativus] >KAE8652530.1 hypothetical protein Csa_014039 [Cucumis sativus]) HSP 1 Score: 434.9 bits (1117), Expect = 4.3e-118 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of CSPI01G06470 vs. NCBI nr
Match: XP_008454802.1 (PREDICTED: light-inducible protein CPRF3-like [Cucumis melo]) HSP 1 Score: 398.3 bits (1022), Expect = 4.5e-107 Identity = 218/227 (96.04%), Postives = 219/227 (96.48%), Query Frame = 0
BLAST of CSPI01G06470 vs. NCBI nr
Match: XP_038895383.1 (uncharacterized protein LOC120083621 [Benincasa hispida]) HSP 1 Score: 338.6 bits (867), Expect = 4.2e-89 Identity = 195/224 (87.05%), Postives = 199/224 (88.84%), Query Frame = 0
BLAST of CSPI01G06470 vs. NCBI nr
Match: TYJ98964.1 (light-inducible protein CPRF3-like [Cucumis melo var. makuwa]) HSP 1 Score: 257.3 bits (656), Expect = 1.2e-64 Identity = 143/152 (94.08%), Postives = 144/152 (94.74%), Query Frame = 0
BLAST of CSPI01G06470 vs. NCBI nr
Match: XP_023001142.1 (basic leucine zipper 43-like [Cucurbita maxima]) HSP 1 Score: 233.4 bits (594), Expect = 1.9e-57 Identity = 144/214 (67.29%), Postives = 156/214 (72.90%), Query Frame = 0
BLAST of CSPI01G06470 vs. TAIR 10
Match: AT5G60830.1 (basic leucine-zipper 70 ) HSP 1 Score: 97.4 bits (241), Expect = 1.5e-20 Identity = 63/125 (50.40%), Postives = 82/125 (65.60%), Query Frame = 0
BLAST of CSPI01G06470 vs. TAIR 10
Match: AT3G30530.1 (basic leucine-zipper 42 ) HSP 1 Score: 72.8 bits (177), Expect = 4.0e-13 Identity = 52/137 (37.96%), Postives = 80/137 (58.39%), Query Frame = 0
BLAST of CSPI01G06470 vs. TAIR 10
Match: AT1G13600.1 (basic leucine-zipper 58 ) HSP 1 Score: 72.0 bits (175), Expect = 6.8e-13 Identity = 55/143 (38.46%), Postives = 81/143 (56.64%), Query Frame = 0
BLAST of CSPI01G06470 vs. TAIR 10
Match: AT2G04038.1 (basic leucine-zipper 48 ) HSP 1 Score: 68.2 bits (165), Expect = 9.8e-12 Identity = 49/122 (40.16%), Postives = 71/122 (58.20%), Query Frame = 0
BLAST of CSPI01G06470 vs. TAIR 10
Match: AT5G15830.1 (basic leucine-zipper 3 ) HSP 1 Score: 67.4 bits (163), Expect = 1.7e-11 Identity = 52/124 (41.94%), Postives = 71/124 (57.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|