CSPI01G00580 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G00580
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 328704 .. 329258 (+)
RNA-Seq ExpressionCSPI01G00580
SyntenyCSPI01G00580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTTTGGTTCAATCTTAGGCGTTCAAAATGCGGACTTTGGCAAAGTGGAGGGTTGTGATGGTGGAGGTGTAATGGTCAACATAGATCGGCGTTCTTTTTACACGTACAGCACTCTAATGCTTATCCAAGATTTGTCGAATTGCAAATAAAGAAACCACTTTTTCTTCTTTCTTCTTATCCTAAGTTTACACTGCTGACCAGTGGCGGGCCATGCTAACGTGCGCCGGACCCGCATCTTGCTTACTGCTTTTGTCTTTACTTTCTTTTGTTGTTGATGTGGCGCCATCTCATGGGTTCTTCGCGTGCTGCCGTGGCGGCCACGAACTGAATCTGCTTCGTCTCTTATGCTTTTTGTGTATATTCAATTTGATAGAGTGGGCCGTTAGGTGCATGCGTGCAGGCTCAGTCCATTGCTAGAATTCACAAGCACTTCTGGCGTATTTCAGTTGGGAATTCTCCTAATAATATGCATTGTGGCTTTTAGTTTTTCTTAATTCAATCCTTAGGAGGTAGATGGGATGTTGGAAGAAGATCCAGCCATTAGTATATGA

mRNA sequence

ATGTCGTTTGGTTCAATCTTAGGCGTTCAAAATGCGGACTTTGGCAAAGTGGAGGGTTGTGATGGTGGAGGTGTAATGGTCAACATAGATCGGCTTTACACTGCTGACCAGTGGCGGGCCATGCTAACGTGCGCCGGACCCGCATCTTGCTTACTGCTTTTGTCTTTACTTTCTTTTGTTGTTGATGTGGCGCCATCTCATGGGTTCTTCGCGTGCTGCCGTGGCGGCCACGAACTGAATCTGCTTCGTCTCTTATGCTTTTTGTGTATATTCAATTTGATAGAGTGGGCCGTTAGGTGCATGCGTGCAGGCTCAGAGGTAGATGGGATGTTGGAAGAAGATCCAGCCATTAGTATATGA

Coding sequence (CDS)

ATGTCGTTTGGTTCAATCTTAGGCGTTCAAAATGCGGACTTTGGCAAAGTGGAGGGTTGTGATGGTGGAGGTGTAATGGTCAACATAGATCGGCTTTACACTGCTGACCAGTGGCGGGCCATGCTAACGTGCGCCGGACCCGCATCTTGCTTACTGCTTTTGTCTTTACTTTCTTTTGTTGTTGATGTGGCGCCATCTCATGGGTTCTTCGCGTGCTGCCGTGGCGGCCACGAACTGAATCTGCTTCGTCTCTTATGCTTTTTGTGTATATTCAATTTGATAGAGTGGGCCGTTAGGTGCATGCGTGCAGGCTCAGAGGTAGATGGGATGTTGGAAGAAGATCCAGCCATTAGTATATGA

Protein sequence

MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFVVDVAPSHGFFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI*
Homology
[Close]
BLAST of CSPI01G00580 vs. ExPASy TrEMBL
Match: A0A0A0LRT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002070 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.9e-62
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0 

Query: 1   MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV 60
           MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV
Sbjct: 1   MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV 60

Query: 61  VDVAPSHGFFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI 120
           VDVAPSHG FACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI
Sbjct: 61  VDVAPSHGLFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI 119

[Close]
BLAST of CSPI01G00580 vs. NCBI nr
Match: KGN63487.1 (hypothetical protein Csa_013608 [Cucumis sativus])

HSP 1 Score: 248.1 bits (632), Expect = 4.0e-62
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0 

Query: 1   MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV 60
           MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV
Sbjct: 1   MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV 60

Query: 61  VDVAPSHGFFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI 120
           VDVAPSHG FACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI
Sbjct: 61  VDVAPSHGLFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI 119

The following BLAST results are available for this feature:
BLAST of CSPI01G00580 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI01G00580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRT41.9e-6299.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002070 PE=4 SV=1[more]
BLAST of CSPI01G00580 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63487.14.0e-6299.16hypothetical protein Csa_013608 [Cucumis sativus][more]
BLAST of CSPI01G00580 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G00580.1CSPI01G00580.1mRNA