BhiUN189G16 (gene) Wax gourd (B227) v1
|
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGGCGTGACAGATTTCATTTATTCAGAGCTTTCTATGGGATTGCCGGTCTCTTTATTAGCTCCTATTTGTGGTGCACAATTTTGTGGAATGTAGGTAGCGGTTATGTCGATTTTGGGGCACTTTTTTTGAAGGTTATCAAACCATATATAATGAGAGAGAGTAAGTCTGCTCATCGTGTCTCAGCACTTAGAAAAGATGAAGAAGATTCGAAAAGAATTCTAAGCTGTGAGAGTCAAAGTGACCGGGAAGTCCGCTTCAGTCATTTGAGGTTCCGGGCGTAGATGGAAAGGCGTGACAGATTTCATTTATTCAGAGCTTTCTATGGGATTGCCGGTCTCTTTATTAGCTCCTATTTGTGGTGCACAATTTTGTGGAATGTAGGTAGCGGTTATGTCGATTTTGGGGCACTTTTTTTGAAGGTTATCAAACCATATATAATGAGAGAGAGTAAGTCTGCTCATCGTGTCTCAGCACTTAGAAAAGATGAAGAAGATTCGAAAAGAATTCTAAGCTGTGAGAGTCAAAGTGACCGGGAAGTCCGCTTCAGTCATTTGAGGTTCCGGGCGTAG ATGGAAAGGCGTGACAGATTTCATTTATTCAGAGCTTTCTATGGGATTGCCGGTCTCTTTATTAGCTCCTATTTGTGGTGCACAATTTTGTGGAATGTAGGTAGCGGTTATGTCGATTTTGGGGCACTTTTTTTGAAGGTTATCAAACCATATATAATGAGAGAGAGTAAGTCTGCTCATCGTGTCTCAGCACTTAGAAAAGATGAAGAAGATTCGAAAAGAATTCTAAGCTGTGAGAGTCAAAGTGACCGGGAAGTCCGCTTCAGTCATTTGAGGTTCCGGGCGTAG MERRDRFHLFRAFYGIAGLFISSYLWCTILWNVGSGYVDFGALFLKVIKPYIMRESKSAHRVSALRKDEEDSKRILSCESQSDREVRFSHLRFRA Homology
BLAST of BhiUN189G16 vs. TAIR 10
Match: ATCG00520.1 (unfolded protein binding ) HSP 1 Score: 57.4 bits (137), Expect = 7.3e-09 Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 0
BLAST of BhiUN189G16 vs. ExPASy Swiss-Prot
Match: P62719 (Photosystem I assembly protein Ycf4 OS=Aegilops crassa OX=4481 GN=ycf4 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.1e-08 Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of BhiUN189G16 vs. ExPASy Swiss-Prot
Match: Q6L602 (Photosystem I assembly protein Ycf4 OS=Aegilops speltoides OX=4573 GN=ycf4 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.1e-08 Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of BhiUN189G16 vs. ExPASy Swiss-Prot
Match: A1EA19 (Photosystem I assembly protein Ycf4 OS=Agrostis stolonifera OX=63632 GN=ycf4 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.1e-08 Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of BhiUN189G16 vs. ExPASy Swiss-Prot
Match: Q70XZ2 (Photosystem I assembly protein Ycf4 OS=Amborella trichopoda OX=13333 GN=ycf4 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.1e-08 Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of BhiUN189G16 vs. ExPASy Swiss-Prot
Match: Q2QD78 (Photosystem I assembly protein Ycf4 OS=Cucumis sativus OX=3659 GN=ycf4 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.1e-08 Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of BhiUN189G16 vs. NCBI nr
Match: AEJ10250.1 (photosystem I assembly protein ycf4 [Juncus effusus]) HSP 1 Score: 61.2 bits (147), Expect = 5.5e-06 Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0
BLAST of BhiUN189G16 vs. NCBI nr
Match: QSZ78324.1 (photosystem I assembly protein Ycf4 [Juncus effusus]) HSP 1 Score: 61.2 bits (147), Expect = 5.5e-06 Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0
BLAST of BhiUN189G16 vs. NCBI nr
Match: QUG56684.1 (photosystem I assembly factor II [Tetrastigma hemsleyanum]) HSP 1 Score: 60.8 bits (146), Expect = 7.1e-06 Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of BhiUN189G16 vs. NCBI nr
Match: YP_009231258.1 (photosystem I assembly protein Ycf4 [Tetrastigma hemsleyanum] >ALV89936.1 photosystem I assembly protein Ycf4 [Tetrastigma hemsleyanum]) HSP 1 Score: 60.8 bits (146), Expect = 7.1e-06 Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of BhiUN189G16 vs. NCBI nr
Match: YP_009261158.1 (photosystem I assembly protein ycf4 [Zeugites pittieri] >ANN37862.1 photosystem I assembly protein ycf4 [Zeugites pittieri]) HSP 1 Score: 60.5 bits (145), Expect = 9.3e-06 Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of BhiUN189G16 vs. ExPASy TrEMBL
Match: F8RT46 (Photosystem I assembly protein Ycf4 OS=Juncus effusus OX=13579 GN=ycf4 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.6e-06 Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0
BLAST of BhiUN189G16 vs. ExPASy TrEMBL
Match: A0A0U3U850 (Photosystem I assembly protein Ycf4 OS=Tetrastigma hemsleyanum OX=1006121 GN=ycf4 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 3.4e-06 Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of BhiUN189G16 vs. ExPASy TrEMBL
Match: A0A222YTL7 (Photosystem I assembly protein Ycf4 OS=Coelachne africana OX=1262102 GN=ycf4 PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 4.5e-06 Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of BhiUN189G16 vs. ExPASy TrEMBL
Match: A0A7H0DGV5 (Photosystem I assembly protein Ycf4 OS=Cuscuta approximata OX=184478 GN=ycf4 PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 4.5e-06 Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of BhiUN189G16 vs. ExPASy TrEMBL
Match: A0A193D8D0 (Photosystem I assembly protein Ycf4 OS=Zeugites pittieri OX=38726 GN=ycf4 PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 4.5e-06 Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|