BhiUN159G49 (gene) Wax gourd (B227) v1

Overview


Name	BhiUN159G49
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Methyltransferases isoform 1
Location	Contig159: 1410187 .. 1410532 (+)
RNA-Seq Expression	BhiUN159G49
Synteny	BhiUN159G49

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAATGGACAGAGAGCGGTGCCAATACACGTTTTAACTGTGGGGAAGAAGAGGTCTTGTGGCGTTCAGCTTCTCGTTGATGAGTATATTGAAAAGCTCAAAAACTACTGTCATGTTGAAGATGTTCAACTACGCTCAAATCCTAGGAATGTGCGGTATATGATTGTGTGGTTAATGTTAGTTTGTAAATTTTGTTTAATTACGTTCATATCTCTGATGAATAGTGCTAGTCTTAATTAAATACTTTCATTCTGCGTATTGGTACTTGAATTTTAGGGATCCGAGAACTCAGGTTAATGATGAAGACATGGCTGTCGTGAATCTTCTCAAGTCTAATGATTGG

mRNA sequence

ATGGACAATGGACAGAGAGCGGTGCCAATACACGTTTTAACTGTGGGGAAGAAGAGGTCTTGTGGCGTTCAGCTTCTCGTTGATGAGTATATTGAAAAGCTCAAAAACTACTGTCATGTTGAAGATGTTCAACTACGCTCAAATCCTAGGAATGTGCGGGATCCGAGAACTCAGGTTAATGATGAAGACATGGCTGTCGTGAATCTTCTCAAGTCTAATGATTGG

Coding sequence (CDS)

ATGGACAATGGACAGAGAGCGGTGCCAATACACGTTTTAACTGTGGGGAAGAAGAGGTCTTGTGGCGTTCAGCTTCTCGTTGATGAGTATATTGAAAAGCTCAAAAACTACTGTCATGTTGAAGATGTTCAACTACGCTCAAATCCTAGGAATGTGCGGGATCCGAGAACTCAGGTTAATGATGAAGACATGGCTGTCGTGAATCTTCTCAAGTCTAATGATTGG

Protein sequence

MDNGQRAVPIHVLTVGKKRSCGVQLLVDEYIEKLKNYCHVEDVQLRSNPRNVRDPRTQVNDEDMAVVNLLKSNDW

Homology

[Close]

BLAST of BhiUN159G49 vs. TAIR 10
Match: AT5G10620.1 (methyltransferases )

HSP 1 Score: 90.9 bits (224), Expect = 4.7e-19
Identity = 44/70 (62.86%), Postives = 55/70 (78.57%), Query Frame = 0


Query: 6   RAVPIHVLTVGKKRSCGVQLLVDEYIEKLKNYCHVEDVQLRSNPRNVRDPRTQVNDEDMA 65
           RA+PI V+TVGKKRS GV+LLVDEY  KLK YC  ED  +RSNPRN +D R QV DE++A
Sbjct: 37  RALPIRVITVGKKRSEGVRLLVDEYKIKLKPYCSFEDSLVRSNPRNAQDVRAQVEDEEVA 96

Query: 66  VVNLLKSNDW 76
           ++ L+ S+DW
Sbjct: 97  MMKLIGSDDW 106

[Close]

BLAST of BhiUN159G49 vs. ExPASy Swiss-Prot
Match: Q9LXB4 (Putative RNA methyltransferase At5g10620 OS=Arabidopsis thaliana OX=3702 GN=At5g10620 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 6.7e-18
Identity = 44/70 (62.86%), Postives = 55/70 (78.57%), Query Frame = 0


Query: 6   RAVPIHVLTVGKKRSCGVQLLVDEYIEKLKNYCHVEDVQLRSNPRNVRDPRTQVNDEDMA 65
           RA+PI V+TVGKKRS GV+LLVDEY  KLK YC  ED  +RSNPRN +D R QV DE++A
Sbjct: 37  RALPIRVITVGKKRSEGVRLLVDEYKIKLKPYCSFEDSLVRSNPRNAQDVRAQVEDEEVA 96

Query: 66  VVNLLKSNDW 76
           ++ L+ S+DW
Sbjct: 97  MMKLIGSDDW 106

[Close]

BLAST of BhiUN159G49 vs. NCBI nr
Match: XP_038896820.1 (putative RNA methyltransferase At5g10620 isoform X1 [Benincasa hispida])

HSP 1 Score: 139.8 bits (351), Expect = 9.5e-30
Identity = 67/75 (89.33%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 1  MDNGQRAVPIHVLTVGKKRSCGVQLLVDEYIEKLKNYCHVEDVQLRSNPRNVRDPRTQVN 60
          MDNGQRAVPI VLTVGKKRS GVQLLVDEYIEKLKNYCH+EDV LRSNPRN RDPR QV+
Sbjct: 24 MDNGQRAVPIRVLTVGKKRSRGVQLLVDEYIEKLKNYCHIEDVLLRSNPRNARDPRAQVD 83

Query: 61 DEDMAVVNLLKSNDW 76
          DEDMAVVNLLKS+DW
Sbjct: 84 DEDMAVVNLLKSDDW 98

[Close]

BLAST of BhiUN159G49 vs. NCBI nr
Match: XP_038896822.1 (putative RNA methyltransferase At5g10620 isoform X3 [Benincasa hispida])

HSP 1 Score: 139.8 bits (351), Expect = 9.5e-30
Identity = 67/75 (89.33%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 1  MDNGQRAVPIHVLTVGKKRSCGVQLLVDEYIEKLKNYCHVEDVQLRSNPRNVRDPRTQVN 60
          MDNGQRAVPI VLTVGKKRS GVQLLVDEYIEKLKNYCH+EDV LRSNPRN RDPR QV+
Sbjct: 24 MDNGQRAVPIRVLTVGKKRSRGVQLLVDEYIEKLKNYCHIEDVLLRSNPRNARDPRAQVD 83

Query: 61 DEDMAVVNLLKSNDW 76
          DEDMAVVNLLKS+DW
Sbjct: 84 DEDMAVVNLLKSDDW 98

[Close]

BLAST of BhiUN159G49 vs. NCBI nr
Match: KAG7037551.1 (putative RNA methyltransferase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132.1 bits (331), Expect = 2.0e-27
Identity = 63/75 (84.00%), Postives = 69/75 (92.00%), Query Frame = 0


Query: 1  MDNGQRAVPIHVLTVGKKRSCGVQLLVDEYIEKLKNYCHVEDVQLRSNPRNVRDPRTQVN 60
          MDN QRAVPI VLTVGKKRS GVQLL+DEYI+KL NYC+VEDVQLRSNPRN RDPR QV+
Sbjct: 1  MDNEQRAVPIRVLTVGKKRSRGVQLLIDEYIDKLNNYCNVEDVQLRSNPRNARDPRAQVD 60

Query: 61 DEDMAVVNLLKSNDW 76
          DED+AVVNLLKS+DW
Sbjct: 61 DEDIAVVNLLKSDDW 75

[Close]

BLAST of BhiUN159G49 vs. NCBI nr
Match: XP_038896823.1 (putative RNA methyltransferase At5g10620 isoform X4 [Benincasa hispida])

HSP 1 Score: 130.6 bits (327), Expect = 5.8e-27
Identity = 63/71 (88.73%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 5  QRAVPIHVLTVGKKRSCGVQLLVDEYIEKLKNYCHVEDVQLRSNPRNVRDPRTQVNDEDM 64
          QRAVPI VLTVGKKRS GVQLLVDEYIEKLKNYCH+EDV LRSNPRN RDPR QV+DEDM
Sbjct: 11 QRAVPIRVLTVGKKRSRGVQLLVDEYIEKLKNYCHIEDVLLRSNPRNARDPRAQVDDEDM 70

Query: 65 AVVNLLKSNDW 76
          AVVNLLKS+DW
Sbjct: 71 AVVNLLKSDDW 81

[Close]

BLAST of BhiUN159G49 vs. NCBI nr
Match: XP_038896821.1 (putative RNA methyltransferase At5g10620 isoform X2 [Benincasa hispida])

HSP 1 Score: 128.6 bits (322), Expect = 2.2e-26
Identity = 62/70 (88.57%), Postives = 65/70 (92.86%), Query Frame = 0


Query: 6  RAVPIHVLTVGKKRSCGVQLLVDEYIEKLKNYCHVEDVQLRSNPRNVRDPRTQVNDEDMA 65
          RAVPI VLTVGKKRS GVQLLVDEYIEKLKNYCH+EDV LRSNPRN RDPR QV+DEDMA
Sbjct: 26 RAVPIRVLTVGKKRSRGVQLLVDEYIEKLKNYCHIEDVLLRSNPRNARDPRAQVDDEDMA 85

Query: 66 VVNLLKSNDW 76
          VVNLLKS+DW
Sbjct: 86 VVNLLKSDDW 95

[Close]

BLAST of BhiUN159G49 vs. ExPASy TrEMBL
Match: A0A1S3CQZ8 (putative RNA methyltransferase At5g10620 OS=Cucumis melo OX=3656 GN=LOC103503770 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.4e-26
Identity = 60/70 (85.71%), Postives = 66/70 (94.29%), Query Frame = 0


Query: 6  RAVPIHVLTVGKKRSCGVQLLVDEYIEKLKNYCHVEDVQLRSNPRNVRDPRTQVNDEDMA 65
          RAVPI VLTVGKKRS GVQLLVDEYI+KLKNYCHVEDVQLRSNPRN RDP+ Q++DED+A
Sbjct: 26 RAVPIRVLTVGKKRSRGVQLLVDEYIDKLKNYCHVEDVQLRSNPRNARDPKAQIDDEDVA 85

Query: 66 VVNLLKSNDW 76
          VVNLLKS+DW
Sbjct: 86 VVNLLKSDDW 95

[Close]

BLAST of BhiUN159G49 vs. ExPASy TrEMBL
Match: A0A5D3E740 (Putative RNA methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006890 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.4e-26
Identity = 60/70 (85.71%), Postives = 66/70 (94.29%), Query Frame = 0


Query: 6  RAVPIHVLTVGKKRSCGVQLLVDEYIEKLKNYCHVEDVQLRSNPRNVRDPRTQVNDEDMA 65
          RAVPI VLTVGKKRS GVQLLVDEYI+KLKNYCHVEDVQLRSNPRN RDP+ Q++DED+A
Sbjct: 30 RAVPIRVLTVGKKRSRGVQLLVDEYIDKLKNYCHVEDVQLRSNPRNARDPKAQIDDEDVA 89

Query: 66 VVNLLKSNDW 76
          VVNLLKS+DW
Sbjct: 90 VVNLLKSDDW 99

[Close]

BLAST of BhiUN159G49 vs. ExPASy TrEMBL
Match: A0A0A0LGS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881670 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.9e-26
Identity = 60/70 (85.71%), Postives = 65/70 (92.86%), Query Frame = 0


Query: 6  RAVPIHVLTVGKKRSCGVQLLVDEYIEKLKNYCHVEDVQLRSNPRNVRDPRTQVNDEDMA 65
          RAVPI VLTVGKKRS GVQLLVDEYI+KLKNYCHVEDVQLRSNPRN RDP+ QV+DED+A
Sbjct: 26 RAVPIRVLTVGKKRSRGVQLLVDEYIDKLKNYCHVEDVQLRSNPRNARDPKAQVDDEDVA 85

Query: 66 VVNLLKSNDW 76
          VVNLLK +DW
Sbjct: 86 VVNLLKPDDW 95

[Close]

BLAST of BhiUN159G49 vs. ExPASy TrEMBL
Match: A0A6J1E0Z2 (putative RNA methyltransferase At5g10620 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026123 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.9e-26
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 0


Query: 6   RAVPIHVLTVGKKRSCGVQLLVDEYIEKLKNYCHVEDVQLRSNPRNVRDPRTQVNDEDMA 65
           RAVPI VLTVGKKRS GVQL+VDEYIEKLK+YC+VEDVQLRSNPRN RDPR QV+DEDMA
Sbjct: 32  RAVPIRVLTVGKKRSRGVQLVVDEYIEKLKHYCNVEDVQLRSNPRNARDPRAQVDDEDMA 91

Query: 66  VVNLLKSNDW 76
           VVNLLKS+DW
Sbjct: 92  VVNLLKSDDW 101

[Close]

BLAST of BhiUN159G49 vs. ExPASy TrEMBL
Match: A0A6J1BPR4 (putative RNA methyltransferase At5g10620 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026123 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.9e-26
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 0


Query: 6  RAVPIHVLTVGKKRSCGVQLLVDEYIEKLKNYCHVEDVQLRSNPRNVRDPRTQVNDEDMA 65
          RAVPI VLTVGKKRS GVQL+VDEYIEKLK+YC+VEDVQLRSNPRN RDPR QV+DEDMA
Sbjct: 30 RAVPIRVLTVGKKRSRGVQLVVDEYIEKLKHYCNVEDVQLRSNPRNARDPRAQVDDEDMA 89

Query: 66 VVNLLKSNDW 76
          VVNLLKS+DW
Sbjct: 90 VVNLLKSDDW 99

The following BLAST results are available for this feature:

BLAST of BhiUN159G49 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10620.1	4.7e-19	62.86	methyltransferases	[more]

BLAST of BhiUN159G49 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXB4	6.7e-18	62.86	Putative RNA methyltransferase At5g10620 OS=Arabidopsis thaliana OX=3702 GN=At5g...	[more]

BLAST of BhiUN159G49 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896820.1	9.5e-30	89.33	putative RNA methyltransferase At5g10620 isoform X1 [Benincasa hispida]	[more]
XP_038896822.1	9.5e-30	89.33	putative RNA methyltransferase At5g10620 isoform X3 [Benincasa hispida]	[more]
KAG7037551.1	2.0e-27	84.00	putative RNA methyltransferase [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038896823.1	5.8e-27	88.73	putative RNA methyltransferase At5g10620 isoform X4 [Benincasa hispida]	[more]
XP_038896821.1	2.2e-26	88.57	putative RNA methyltransferase At5g10620 isoform X2 [Benincasa hispida]	[more]

BLAST of BhiUN159G49 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CQZ8	2.4e-26	85.71	putative RNA methyltransferase At5g10620 OS=Cucumis melo OX=3656 GN=LOC103503770...	[more]
A0A5D3E740	2.4e-26	85.71	Putative RNA methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0LGS0	6.9e-26	85.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881670 PE=3 SV=1	[more]
A0A6J1E0Z2	6.9e-26	87.14	putative RNA methyltransferase At5g10620 isoform X1 OS=Momordica charantia OX=36...	[more]
A0A6J1BPR4	6.9e-26	87.14	putative RNA methyltransferase At5g10620 isoform X2 OS=Momordica charantia OX=36...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003742	RNA methyltransferase RlmH	PFAM	PF02590	SPOUT_MTase	coord: 10..74 e-value: 2.8E-6 score: 27.4
IPR003742	RNA methyltransferase RlmH	PANTHER	PTHR33603	METHYLTRANSFERASE	coord: 5..75
IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	GENE3D	3.40.1280.10		coord: 7..75 e-value: 5.4E-6 score: 27.9
IPR029028	Alpha/beta knot methyltransferases	SUPERFAMILY	75217	alpha/beta knot	coord: 9..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
BhiUN159M49	BhiUN159M49	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0006364	rRNA processing
molecular_function	GO:0008168	methyltransferase activity