Bhi12G002190 (gene) Wax gourd (B227) v1

Overview


Name	Bhi12G002190
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	selenoprotein F-like
Location	chr12: 77617289 .. 77622065 (+)
RNA-Seq Expression	Bhi12G002190
Synteny	Bhi12G002190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCTTCAAATTTGAAGTTTAAAAAATTGGTCTTTCGAAGTGAGAGTTTTCTGATCGTCTGTAGACTTCGCTTCTTCACCCTCAATCGCCGGCGAACATAGAGATGCAGCTTCTCCCCGGGGTAAGGAATCCCGCTACGGCGGTGACGATGGCGGTAGCAGCAACGGTGGTCATTTTCATAGCGTCAATGCCGTTGGCTTGGTCAAAGGAGCAACTTAGCTCGAGGGAATGTGAGGATCTAGGTTTCACGGGCCTTGCTCTCTGTTCCGATTGTCACACTTTAGCTGAATATATCAAAGATCAAGGTGATGTGTTTAATTCGTTGTTATTTGTACACTAATTCTTGATTCGGTTTTGAATTTATATCTTTACTGCTGCATTTCTTCCGTTTTCGTGGCTATTTCTCGTGAATTAGCAGCATCGTAATGGATTTTGTTCGCTATTTTTCTTGATTCTCTCCGTTCTTTTGTACGGTGGATTGTGCTTCTTGTGATTGGTTTTGTTTACGTATCTTTTTTTTTTGCTTGATTTGGATTTTGGATTTCCGGATTACTTTGTTGTAGTCTGATGTGTAAAGTGCTGGTTATAATTTCGATATCTTCAATCAATTTCTTAGTATTGTGGATAAAGTTTGCTAATATTAGTTCTCATTTTGTTCAAAGATACGGTAAGTGGTGAGTTCAGTGACAGACTTAAGTTCCTACTTCTTTGATTGTGTGGGAATTTGTTTGGGAAGATAGTTCCTGAAATTCTGATATAATAATTTGTTTTGTATGTAAAAACCCATAAAAAACTGTTTCTATGGGAAGAAAAAAAAGTCCTCAACTTTTTGAAGCTGTGGATAATCTTGTTCCTCCAGTGATTTGTTGATTATGTTTTCAGAAATCATGTATCAAGTATTTCTGATAAGTGATTGTTAGTGCTATTCCTCTTGGCGACTTTTTTTTTTCTCGCAATGACCTTTATCCACAAGTGGAAATGGTTTCATATCTCCCCCACACCGATGATATATGCTTTTGATTGAATAAAACTCTATGTGGAAAGAAGGGAAACGCCCCTCTTTCATTGCTTGAAGATATTCTTTCTTGTGAATATTGATTTCAAGTGCACTTGTTATTACGAGTTATCTGATCACAATGCTCAAAGGAGTCTGCTTTTCAAGGCTGTCTCCAAAGGCCATGTTTGTTAAATGTGAAAATGCTTATACAGCGGTTAGAGAAATCATTTTCCACGCTTAGACTAATGCTGTTAATTGAACCTTACTCTAGTAAAGGCACTTTCTAAAATTATATTTGCTCCCCACCTCTTCTAGCAGTCACCTGTCTTTTCAAAATAGCACCCTAACATCACTTTTAAGGAAATACTAGGCTTGGCTGGGGGAGATCTTCCCGGGGGGTTCCATTACCTTCAACTGTTTATGCAACTGTTTTTGGAAACAAGAAATAGGTTGGAGATGTTGAGTTAAGATAACATATTGCCTTTAAGTATCGTATTTTAAGAATCCGTAGGTTTACAAATGACTTTTACCGAAACATTTCAAAAAATGTAATTCCAAATGAAGAATTCAGTCATTGTTGCACCGGCAATTCTGGCAACATTGGATTTGTGAAGGATTGATAATGACTTCAAATAGTTTTTATCCAAAAGAAGAAAAGAATTGATGGTATGTAAAATCTGCAACCGTTTTGTGTCAGCTTATGTAATAGTTTTGAAGTGCATTGTTTTTAATATTACACACTATCCTCATGCCCAGATTTGTACTGCAGAATTAGTGACGGACTGTTTGAAGTGTTGCACTGAGGATTCTGATGATGCCACGAGTAAGGTACACAAGATGTCATAAATGTGCTGATTTCTTCAAAGGGAATCAATGAAATCTTAGTTCTCCCCCAAAAATTCATTAGCTGACAGTTCCTTTTGTGATTAATGTATCACACTTCTAAAACTGAATGCTTGTACATCCCTGTGGTAGATTTGTCAATTTAAAACACATTAGTTCAGCAGATGTAATTATCACAACTACGGTCCAAAACAAGGTTTCCGTAAATAAGGGAAACTAACTCATCTTTAGAAAAAGGTGATACAAGGGATGTGCAATGCATTGACAATGCATATCACAACCCTGTTGAAAGTGGGGGATTAGAAATACTTGGCTCATTGTTGAGCTAGTGTAACCTACTAATTCACCTTATTTTGTAAATTACCATGGGTACACATCAATAGTATTTTTAATATCCTTTTATCAGTGTTTCAAACTTCTGGAGAGATTTTCCACATTCAATATGAGACGATTACTTGTTCCAAGAGACTAGTAGTTTCCCTTTTCCATTTAGCCGTATACCCCTCCATGGAGTTGCAGGGACAACTATTCTATGATTAAGGACATCCTGATGAACTCCCCTCTCGAGATGGAGTGTTGTAGCAAGCTTGCTCCTTTGGTATTTTGTGGGATTTGTAGCTCGAGTTGAATAGTAGGATCTTTAGAGGGGCTAAGAGGTCCATTACTTGGACTTCTTGTAACTATTAGTCTGGTCTTATTCCCTTTTTTTTTTCTTAATTGGTATCCATTTTGTAGGTTGTTAAGGACTCTTTTTGGGAGCTTATTTTTTGTATGCCCCAATATATTCTTTCATTGATCTTCATGAAAGCTTGGGTTCCAAAAAAAAAAAAAAAAAATTATCGTCCAAGAAACGTTCTTGAAAATTCCGCTATTGAGCTCACACCAAAGATTCCAGATAAAAGCTTGGTTGATGGCTGGATAAAGTCTTCTTAAAACGATAAGTATGTCCCACAAAAACCAAGGGCAATATGTCATAAATAGTTCCAAGGCGAAGTCTTATATACATCCAGAATTTAGAATCTCTCCAAGAGATTGAGTTTTGAGTTCCACCCTCACCCAAATTCAGTACTCTGTTGTTTGTTGTTGATTGTGTTTCATAACTATTTGCATTTGTGTCTTATCATTTCATTTCAACTAAAGATGAAAGCCGATTGACTAAGTTCCCTGACCAGTGTTTTTAAATGTCCAAGGTGCCTTAAGGCACAATGGCCTTCTGGAAGCCTAGGCGCACAAAAAAGCGCGGACTTTTTTTTGTGAGGCGCACTATATATAAAAATATTACATTAAAAAGAGAGAGTATAATTGAAGTGGAAATATGGAAAAAAGGGACCCAAAACACAAGAAATTTTGCATTTAGGTTTGGTAAACTTGATCCTTTTAGTTAATAAGAAGGAAAATCCTTAATTATTACTATTTTTAAAAATAATTGAAAAGCCCTAAGGTGCAGGGCTTTGATCCTTGGGGCTTCACAAAAGGCGCGCACCTAAGGCGTGCCTTATTTTGTGAGCCTCGCTTTTCCAAGGCGAGGCGCTAGACCTGCACCTTGGGCCTAGGCGTGCGCCGAGAGGGCTTTTTAAAACACTGTTCCTGCCTGCAGATAACTTATTCTGGTGCCGTGCTGGAAGTCTGCATGAGGAAGCTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATCAATTCCCTTCAGTTAAGGTTCAATATATCTTCAACTCTCCACCGAAGCTGATTTTGCTGGATGATGAGGGCCAACATAAAGAAAGCATCAGGTAACTTCTACTTTTTCTATTTACTTGTTATATAATAATGTATAGAAGAATGCTCGTATCCATAACTTATGTCAGAGTACATATAATTAATCTTAAGGATTGTTTAGGGCACTGAGTTGAGTTTTAAAGTCTAAAATTAATATGTTGGAGTTAGAAAGTTTGTGCTTGAGGTGTAAAGTTACGAAAATGGAATTTCTCGATAAATGTACAAAAGAGAGAAAAATGAGAAGATGAAGTTCTTCGATGATTGTGCAAACTTTAATTGTGAACACTATTGAAGTTGGTGGAGTTGAGTTATTTAGCCAAACACCCCCTTAGAGCAAAATCAAGTGAATCAAGTGAATGAAGAATATGTTTGAGGAGGTTAAGATGGTGTATATAGCGATATAGATTTTGATTTAGCTTAATAGGTTAAATTACCATTGTCCATTGATGATAGTCTCGATATAACAAATGTTTGATATTTTATATGTTAACTTTTGCAGGATTGATAATTGGAAACGTGAACATATTTTGCAGTTCCTGCAAGAGAAGGTTAAGCGATCTTCAGCGATTTAAAGGTTCTCACTTTTTTCCCCCCACCTGAATCCTGTAAAAAAAAAAAAAAAAAAAACGATGAATAATTGCAATGAAACTACATTCAGCCAGAAAACTTGAGGTGAGTGAACATTGATAATTGGAAACGTGAACATATTTTGCAGTTCCTGCAAGAGAAGGTTAAGCGATCTTCAGCGATTTAAAGGTTCTCACTTTTTTCCCCCCACCTGAATCCTGTAAAAAAAAAAAAAAAAAAAACTTGATGAATTTGCATGAAACTACATTCAGCCAGAAAACTTGAGGTGAGTGAACATTGATTTTGTCAATGTCAAGGAAAGTAGGAAACAGAACTGATTTTCCTTGTCTAAGTCTTCTACTCTAAAAATTTAATTCATCTTTCTTAGAACTCAAGGATACTATATAACAGATCCGGTTCAAGTAAGGTCATAATTTAATGTATCTTTCAACAACAATAAAATTCATCATTCGAAAATGCCTCCC

mRNA sequence

ATTTCTTCAAATTTGAAGTTTAAAAAATTGGTCTTTCGAAGTGAGAGTTTTCTGATCGTCTGTAGACTTCGCTTCTTCACCCTCAATCGCCGGCGAACATAGAGATGCAGCTTCTCCCCGGGGTAAGGAATCCCGCTACGGCGGTGACGATGGCGGTAGCAGCAACGGTGGTCATTTTCATAGCGTCAATGCCGTTGGCTTGGTCAAAGGAGCAACTTAGCTCGAGGGAATGTGAGGATCTAGGTTTCACGGGCCTTGCTCTCTGTTCCGATTGTCACACTTTAGCTGAATATATCAAAGATCAAGAATTAGTGACGGACTGTTTGAAGTGTTGCACTGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCCGTGCTGGAAGTCTGCATGAGGAAGCTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATCAATTCCCTTCAGTTAAGGTTCAATATATCTTCAACTCTCCACCGAAGCTGATTTTGCTGGATGATGAGGGCCAACATAAAGAAAGCATCAGTTCCTGCAAGAGAAGGTTAAGCGATCTTCAGCGATTTAAAGGTTCTCACTTTTTTCCCCCCACCTGAATCCTGTAAAAAAAAAAAAAAAAAAAACTTGATGAATTTGCATGAAACTACATTCAGCCAGAAAACTTGAGGTGAGTGAACATTGATTTTGTCAATGTCAAGGAAAGTAGGAAACAGAACTGATTTTCCTTGTCTAAGTCTTCTACTCTAAAAATTTAATTCATCTTTCTTAGAACTCAAGGATACTATATAACAGATCCGGTTCAAGTAAGGTCATAATTTAATGTATCTTTCAACAACAATAAAATTCATCATTCGAAAATGCCTCCC

Coding sequence (CDS)

ATGCAGCTTCTCCCCGGGGTAAGGAATCCCGCTACGGCGGTGACGATGGCGGTAGCAGCAACGGTGGTCATTTTCATAGCGTCAATGCCGTTGGCTTGGTCAAAGGAGCAACTTAGCTCGAGGGAATGTGAGGATCTAGGTTTCACGGGCCTTGCTCTCTGTTCCGATTGTCACACTTTAGCTGAATATATCAAAGATCAAGAATTAGTGACGGACTGTTTGAAGTGTTGCACTGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCCGTGCTGGAAGTCTGCATGAGGAAGCTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATCAATTCCCTTCAGTTAAGGTTCAATATATCTTCAACTCTCCACCGAAGCTGATTTTGCTGGATGATGAGGGCCAACATAAAGAAAGCATCAGTTCCTGCAAGAGAAGGTTAAGCGATCTTCAGCGATTTAAAGGTTCTCACTTTTTTCCCCCCACCTGA

Protein sequence

MQLLPGVRNPATAVTMAVAATVVIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESISSCKRRLSDLQRFKGSHFFPPT

Homology

[Close]

BLAST of Bhi12G002190 vs. TAIR 10
Match: AT1G05720.1 (selenoprotein family protein )

HSP 1 Score: 212.2 bits (539), Expect = 3.2e-55
Identity = 97/132 (73.48%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 16  MAVAATVVIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLK 75
           M V + ++I I +  ++ +KEQLS++ECEDLGF+GLALCSDCH+L+EY+KDQELV+DCLK
Sbjct: 9   MVVLSAMMILILASTIS-AKEQLSTKECEDLGFSGLALCSDCHSLSEYVKDQELVSDCLK 68

Query: 76  CCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLI 135
           CC +DS+D+ SK+TYSGA+LEVCMRKLVFYPEIVGFIEEEK++FPSVKVQYIFNSPPKLI
Sbjct: 69  CCADDSEDSMSKVTYSGAILEVCMRKLVFYPEIVGFIEEEKEKFPSVKVQYIFNSPPKLI 128

Query: 136 LLDDEGQHKESI 148
           +LD++G+HKESI
Sbjct: 129 MLDEDGEHKESI 139

[Close]

BLAST of Bhi12G002190 vs. ExPASy Swiss-Prot
Match: A8YXY3 (Selenoprotein F OS=Bos taurus OX=9913 GN=SELENOF PE=2 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 4.8e-16
Identity = 45/125 (36.00%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 37  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCTEDSDDATSKITYSGAVLE 96
           + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LE
Sbjct: 32  EFSSESCRELGFSSNLLCSSCDLLGQF-NLLQLDPDCRGCCQEEAQFETKKL-YAGAILE 91

Query: 97  VCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLILLDDEGQHKESISSCKRRLS 156
           VC  KL  +P++  F+  +K + F  ++++Y+  S P L LLDD G   E +S  K    
Sbjct: 92  VCGXKLGRFPQVQAFVRSDKPKLFKGLQIKYVRGSDPVLKLLDDSGNIAEELSILKWNTD 151

Query: 157 DLQRF 161
            ++ F
Sbjct: 152 SVEEF 154

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BLAST of Bhi12G002190 vs. ExPASy Swiss-Prot
Match: O60613 (Selenoprotein F OS=Homo sapiens OX=9606 GN=SELENOF PE=1 SV=4)

HSP 1 Score: 85.1 bits (209), Expect = 8.2e-16
Identity = 45/125 (36.00%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 37  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCTEDSDDATSKITYSGAVLE 96
           + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LE
Sbjct: 35  EFSSEACRELGFSSNLLCSSCDLLGQF-NLLQLDPDCRGCCQEEAQFETKKL-YAGAILE 94

Query: 97  VCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLILLDDEGQHKESISSCKRRLS 156
           VC  KL  +P++  F+  +K + F  ++++Y+  S P L LLDD G   E +S  K    
Sbjct: 95  VCGXKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTD 154

Query: 157 DLQRF 161
            ++ F
Sbjct: 155 SVEEF 157

[Close]

BLAST of Bhi12G002190 vs. ExPASy Swiss-Prot
Match: Q802F3 (Selenoprotein F OS=Danio rerio OX=7955 GN=selenof PE=2 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 1.4e-15
Identity = 45/125 (36.00%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 37  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCTEDSDDATSKITYSGAVLE 96
           +LSS  C +LGF+   LCS C  L ++  +Q L   C +CC E++     K+ Y GA+LE
Sbjct: 23  ELSSEACRELGFSSNLLCSSCELLGQFSLNQ-LDLPCRQCCQEEAQLENRKL-YPGAILE 82

Query: 97  VCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLILLDDEGQHKESISSCKRRLS 156
           VC  KL  +P++  F+  +K + F  ++++Y+  S P L LLDD G   E +S  K    
Sbjct: 83  VCGXKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTD 142

Query: 157 DLQRF 161
            ++ F
Sbjct: 143 SVEEF 145

[Close]

BLAST of Bhi12G002190 vs. ExPASy Swiss-Prot
Match: A1Z623 (Selenoprotein F OS=Sus scrofa OX=9823 GN=SELENOF PE=2 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-15
Identity = 45/125 (36.00%), Postives = 69/125 (55.20%), Query Frame = 0


Query: 37  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCTEDSDDATSKITYSGAVLE 96
           + SS  C +LGF+   LC  C  L ++   Q L  DC  CC E++   T K+ Y+GA+LE
Sbjct: 32  EFSSESCRELGFSSNLLCGSCDLLGQFDLLQ-LDPDCRGCCQEEAQFETKKL-YAGAILE 91

Query: 97  VCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLILLDDEGQHKESISSCKRRLS 156
           VC  KL  +P++  F+  +K + F  ++++Y+  S P L LLDD G   E +S  K    
Sbjct: 92  VCGXKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTD 151

Query: 157 DLQRF 161
            ++ F
Sbjct: 152 SVEEF 154

[Close]

BLAST of Bhi12G002190 vs. ExPASy Swiss-Prot
Match: Q923V8 (Selenoprotein F OS=Rattus norvegicus OX=10116 GN=Selenof PE=1 SV=3)

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-14
Identity = 44/125 (35.20%), Postives = 68/125 (54.40%), Query Frame = 0


Query: 37  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCTEDSDDATSKITYSGAVLE 96
           + SS  C +LGF+   LCS C  L ++     L   C  CC E++   T K+ Y+GA+LE
Sbjct: 32  EFSSEACRELGFSSNLLCSSCDLLGQF-NLLPLDPVCRGCCQEEAQFETKKL-YAGAILE 91

Query: 97  VCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLILLDDEGQHKESISSCKRRLS 156
           VC  KL  +P++  F+  +K + F  ++++Y+  S P L LLDD G   E +S  K    
Sbjct: 92  VCGXKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTD 151

Query: 157 DLQRF 161
            ++ F
Sbjct: 152 SVEEF 154

[Close]

BLAST of Bhi12G002190 vs. NCBI nr
Match: XP_038875398.1 (selenoprotein F [Benincasa hispida])

HSP 1 Score: 296.6 bits (758), Expect = 1.4e-76
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MQLLPGVRNPATAVTMAVAATVVIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQLLPGVRNPATAVTMAVAATVVIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQLLPGVRNPATAVTMAVAATVVIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQELVTDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120
           AEYIKDQELVTDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP
Sbjct: 61  AEYIKDQELVTDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120

Query: 121 SVKVQYIFNSPPKLILLDDEGQHKESI 148
           SVKVQYIFNSPPKLILLDDEGQHKESI
Sbjct: 121 SVKVQYIFNSPPKLILLDDEGQHKESI 147

[Close]

BLAST of Bhi12G002190 vs. NCBI nr
Match: XP_008460012.1 (PREDICTED: 15 kDa selenoprotein [Cucumis melo])

HSP 1 Score: 277.3 bits (708), Expect = 8.6e-71
Identity = 135/147 (91.84%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 1   MQLLPGVRNPATAVTMAVAATVVIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQLLPGV NPATAVT+ +AA  +IFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQELVTDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120
           AEYIKDQELV DCLKCC EDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEE+KDQFP
Sbjct: 61  AEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEDKDQFP 120

Query: 121 SVKVQYIFNSPPKLILLDDEGQHKESI 148
           SVKVQY FNSPPKLILLDDEGQHKESI
Sbjct: 121 SVKVQYTFNSPPKLILLDDEGQHKESI 147

[Close]

BLAST of Bhi12G002190 vs. NCBI nr
Match: KAG6575383.1 (Selenoprotein F, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 274.2 bits (700), Expect = 7.3e-70
Identity = 136/147 (92.52%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MQLLPGVRNPATAVTMAVAATVVIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQLL GV+NPAT VTM   AT +IFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQLLTGVKNPATMVTM---ATAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQELVTDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120
           AEYIKDQELVTDCLKCCTEDSDDATSKITYSGA+LEVCMRKLVFYPEIVGFIEEEKDQFP
Sbjct: 61  AEYIKDQELVTDCLKCCTEDSDDATSKITYSGAMLEVCMRKLVFYPEIVGFIEEEKDQFP 120

Query: 121 SVKVQYIFNSPPKLILLDDEGQHKESI 148
           SV VQY FNSPPKLILLDDEGQHKESI
Sbjct: 121 SVNVQYTFNSPPKLILLDDEGQHKESI 144

[Close]

BLAST of Bhi12G002190 vs. NCBI nr
Match: XP_022954272.1 (selenoprotein F-like [Cucurbita moschata] >XP_023549321.1 selenoprotein F-like [Cucurbita pepo subsp. pepo] >KAG7013922.1 Selenoprotein F [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 274.2 bits (700), Expect = 7.3e-70
Identity = 136/147 (92.52%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MQLLPGVRNPATAVTMAVAATVVIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQLL GV+NPAT VTM   AT +IFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQLLTGVKNPATMVTM---ATAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQELVTDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120
           AEYIKDQELVTDCLKCCTEDSDDATSKITYSGA+LEVCMRKLVFYPEIVGFIEEEKDQFP
Sbjct: 61  AEYIKDQELVTDCLKCCTEDSDDATSKITYSGAMLEVCMRKLVFYPEIVGFIEEEKDQFP 120

Query: 121 SVKVQYIFNSPPKLILLDDEGQHKESI 148
           SV VQY FNSPPKLILLDDEGQHKESI
Sbjct: 121 SVNVQYTFNSPPKLILLDDEGQHKESI 144

[Close]

BLAST of Bhi12G002190 vs. NCBI nr
Match: KAA0039920.1 (15 kDa selenoprotein [Cucumis melo var. makuwa] >TYK24580.1 15 kDa selenoprotein [Cucumis melo var. makuwa])

HSP 1 Score: 272.3 bits (695), Expect = 2.8e-69
Identity = 137/158 (86.71%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MQLLPGVRNPATAVTMAVAATVVIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQLLPGV NPATAVT+A+AAT +IFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQ-----------ELVTDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIV 120
           AEYIKDQ           ELV DCLKCC EDSDDATSKITYSGAVLEVCMRKLVFYPEIV
Sbjct: 61  AEYIKDQGDAFNSVIRSAELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIV 120

Query: 121 GFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESI 148
           GFIEE+KDQFPSVKVQY FNSPPKLILLDDEGQHKESI
Sbjct: 121 GFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESI 158

[Close]

BLAST of Bhi12G002190 vs. ExPASy TrEMBL
Match: A0A1S3CC00 (15 kDa selenoprotein OS=Cucumis melo OX=3656 GN=LOC103498956 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.2e-71
Identity = 135/147 (91.84%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 1   MQLLPGVRNPATAVTMAVAATVVIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQLLPGV NPATAVT+ +AA  +IFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQELVTDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120
           AEYIKDQELV DCLKCC EDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEE+KDQFP
Sbjct: 61  AEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEDKDQFP 120

Query: 121 SVKVQYIFNSPPKLILLDDEGQHKESI 148
           SVKVQY FNSPPKLILLDDEGQHKESI
Sbjct: 121 SVKVQYTFNSPPKLILLDDEGQHKESI 147

[Close]

BLAST of Bhi12G002190 vs. ExPASy TrEMBL
Match: A0A6J1GQK6 (selenoprotein F-like OS=Cucurbita moschata OX=3662 GN=LOC111456577 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.5e-70
Identity = 136/147 (92.52%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MQLLPGVRNPATAVTMAVAATVVIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQLL GV+NPAT VTM   AT +IFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQLLTGVKNPATMVTM---ATAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQELVTDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120
           AEYIKDQELVTDCLKCCTEDSDDATSKITYSGA+LEVCMRKLVFYPEIVGFIEEEKDQFP
Sbjct: 61  AEYIKDQELVTDCLKCCTEDSDDATSKITYSGAMLEVCMRKLVFYPEIVGFIEEEKDQFP 120

Query: 121 SVKVQYIFNSPPKLILLDDEGQHKESI 148
           SV VQY FNSPPKLILLDDEGQHKESI
Sbjct: 121 SVNVQYTFNSPPKLILLDDEGQHKESI 144

[Close]

BLAST of Bhi12G002190 vs. ExPASy TrEMBL
Match: A0A5A7T9G4 (15 kDa selenoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001250 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-69
Identity = 137/158 (86.71%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MQLLPGVRNPATAVTMAVAATVVIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQLLPGV NPATAVT+A+AAT +IFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQ-----------ELVTDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIV 120
           AEYIKDQ           ELV DCLKCC EDSDDATSKITYSGAVLEVCMRKLVFYPEIV
Sbjct: 61  AEYIKDQGDAFNSVIRSAELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIV 120

Query: 121 GFIEEEKDQFPSVKVQYIFNSPPKLILLDDEGQHKESI 148
           GFIEE+KDQFPSVKVQY FNSPPKLILLDDEGQHKESI
Sbjct: 121 GFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESI 158

[Close]

BLAST of Bhi12G002190 vs. ExPASy TrEMBL
Match: A0A6J1JXH9 (selenoprotein F-like OS=Cucurbita maxima OX=3661 GN=LOC111488731 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.9e-69
Identity = 135/147 (91.84%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MQLLPGVRNPATAVTMAVAATVVIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQLL GV+NPAT VTM   AT +IFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQLLTGVKNPATMVTM---ATAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQELVTDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120
           AEYIKDQELVTDCLKCCTEDSDDATSKITYSGA+LEVCMRKLVFYPEIVGFIEEEK QFP
Sbjct: 61  AEYIKDQELVTDCLKCCTEDSDDATSKITYSGAMLEVCMRKLVFYPEIVGFIEEEKYQFP 120

Query: 121 SVKVQYIFNSPPKLILLDDEGQHKESI 148
           SV VQY FNSPPKLILLDDEGQHKESI
Sbjct: 121 SVNVQYTFNSPPKLILLDDEGQHKESI 144

[Close]

BLAST of Bhi12G002190 vs. ExPASy TrEMBL
Match: A0A0A0KA30 (Sep15_SelM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087180 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 6.7e-69
Identity = 131/147 (89.12%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MQLLPGVRNPATAVTMAVAATVVIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTL 60
           MQLLPGV N A AVT+A+ AT +IFI+SMPL WSKEQLSSRECEDLGFTGLALCSDCHTL
Sbjct: 1   MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTL 60

Query: 61  AEYIKDQELVTDCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQFP 120
           AEYIKDQELV+DCLKCC EDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIE++KDQFP
Sbjct: 61  AEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEDDKDQFP 120

Query: 121 SVKVQYIFNSPPKLILLDDEGQHKESI 148
           SVKVQY FNSPPKLILLDD+GQHKESI
Sbjct: 121 SVKVQYTFNSPPKLILLDDKGQHKESI 147

The following BLAST results are available for this feature:

BLAST of Bhi12G002190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05720.1	3.2e-55	73.48	selenoprotein family protein	[more]

BLAST of Bhi12G002190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8YXY3	4.8e-16	36.00	Selenoprotein F OS=Bos taurus OX=9913 GN=SELENOF PE=2 SV=2	[more]
O60613	8.2e-16	36.00	Selenoprotein F OS=Homo sapiens OX=9606 GN=SELENOF PE=1 SV=4	[more]
Q802F3	1.4e-15	36.00	Selenoprotein F OS=Danio rerio OX=7955 GN=selenof PE=2 SV=2	[more]
A1Z623	1.8e-15	36.00	Selenoprotein F OS=Sus scrofa OX=9823 GN=SELENOF PE=2 SV=2	[more]
Q923V8	2.0e-14	35.20	Selenoprotein F OS=Rattus norvegicus OX=10116 GN=Selenof PE=1 SV=3	[more]

BLAST of Bhi12G002190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875398.1	1.4e-76	100.00	selenoprotein F [Benincasa hispida]	[more]
XP_008460012.1	8.6e-71	91.84	PREDICTED: 15 kDa selenoprotein [Cucumis melo]	[more]
KAG6575383.1	7.3e-70	92.52	Selenoprotein F, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022954272.1	7.3e-70	92.52	selenoprotein F-like [Cucurbita moschata] >XP_023549321.1 selenoprotein F-like [...	[more]
KAA0039920.1	2.8e-69	86.71	15 kDa selenoprotein [Cucumis melo var. makuwa] >TYK24580.1 15 kDa selenoprotein...	[more]

BLAST of Bhi12G002190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CC00	4.2e-71	91.84	15 kDa selenoprotein OS=Cucumis melo OX=3656 GN=LOC103498956 PE=3 SV=1	[more]
A0A6J1GQK6	3.5e-70	92.52	selenoprotein F-like OS=Cucurbita moschata OX=3662 GN=LOC111456577 PE=3 SV=1	[more]
A0A5A7T9G4	1.3e-69	86.71	15 kDa selenoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266...	[more]
A0A6J1JXH9	3.9e-69	91.84	selenoprotein F-like OS=Cucurbita maxima OX=3661 GN=LOC111488731 PE=3 SV=1	[more]
A0A0A0KA30	6.7e-69	89.12	Sep15_SelM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087180 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014912	Selenoprotein F/M domain	PFAM	PF08806	Sep15_SelM	coord: 93..148 e-value: 3.1E-19 score: 68.9
IPR038219	Selenoprotein F/M, thioredoxin-like domain superfamily	GENE3D	3.40.30.50		coord: 92..160 e-value: 4.3E-18 score: 67.4
IPR039992	Selenoprotein F/M	PANTHER	PTHR13077	SELENOPROTEIN F	coord: 20..148
None	No IPR available	PANTHER	PTHR13077:SF8	BNAANNG25340D PROTEIN	coord: 20..148
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 76..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M002190	Bhi12M002190	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005788	endoplasmic reticulum lumen
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016491	oxidoreductase activity