Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCAAGTTCACAGCAAATATCCCTAGATATGAATGAACTTTATTCCTTCATCACAGCAATTAATGAAAGAAATCCTGGAATCAACAGTTTTACTTGGGAAGCATCAGATTGCTTACCAATTTGCATCACAATGCAGAGGCCTCCACCGGCCAACAGCTCTCAGACTCAAAATAATCTTGGAAAGACAACTCTTGGCCTTACTTTCCAGGCAGTTTTGGCCTTGTTCATTAGCACACCCAGTTCATCACCTCCACAATTGACACGTCTCTTTGGGGCTGCAGTCTTGCTTAGCTTTGCAGTTTCATTTGCTGGACTTTTCCTTCAAAATGCATTCCCGAGAATCGCACTTTTGTTAGGAAAGATTGGTGCTTTTATCGCTGCAATTGGTGTGTGCATCATAACAAGTCTTCTTCTGATCCATCAGAACTTTGCTTGGATCTCTTGGCTGGCATGTGGCTTCTTCTTGATGGCTTTTATTCTATCATTTAGAGGGCAGTGGCATCAGAACATTGGTTCTTTAGCTTGTTCTGTAAGACAGACTCTGTAA
mRNA sequence
ATGGAATCAAGTTCACAGCAAATATCCCTAGATATGAATGAACTTTATTCCTTCATCACAGCAATTAATGAAAGAAATCCTGGAATCAACAGTTTTACTTGGGAAGCATCAGATTGCTTACCAATTTGCATCACAATGCAGAGGCCTCCACCGGCCAACAGCTCTCAGACTCAAAATAATCTTGGAAAGACAACTCTTGGCCTTACTTTCCAGGCAGTTTTGGCCTTGTTCATTAGCACACCCAGTTCATCACCTCCACAATTGACACGTCTCTTTGGGGCTGCAGTCTTGCTTAGCTTTGCAGTTTCATTTGCTGGACTTTTCCTTCAAAATGCATTCCCGAGAATCGCACTTTTGTTAGGAAAGATTGGTGCTTTTATCGCTGCAATTGGTGTGTGCATCATAACAAGTCTTCTTCTGATCCATCAGAACTTTGCTTGGATCTCTTGGCTGGCATGTGGCTTCTTCTTGATGGCTTTTATTCTATCATTTAGAGGGCAGTGGCATCAGAACATTGGTTCTTTAGCTTGTTCTGTAAGACAGACTCTGTAA
Coding sequence (CDS)
ATGGAATCAAGTTCACAGCAAATATCCCTAGATATGAATGAACTTTATTCCTTCATCACAGCAATTAATGAAAGAAATCCTGGAATCAACAGTTTTACTTGGGAAGCATCAGATTGCTTACCAATTTGCATCACAATGCAGAGGCCTCCACCGGCCAACAGCTCTCAGACTCAAAATAATCTTGGAAAGACAACTCTTGGCCTTACTTTCCAGGCAGTTTTGGCCTTGTTCATTAGCACACCCAGTTCATCACCTCCACAATTGACACGTCTCTTTGGGGCTGCAGTCTTGCTTAGCTTTGCAGTTTCATTTGCTGGACTTTTCCTTCAAAATGCATTCCCGAGAATCGCACTTTTGTTAGGAAAGATTGGTGCTTTTATCGCTGCAATTGGTGTGTGCATCATAACAAGTCTTCTTCTGATCCATCAGAACTTTGCTTGGATCTCTTGGCTGGCATGTGGCTTCTTCTTGATGGCTTTTATTCTATCATTTAGAGGGCAGTGGCATCAGAACATTGGTTCTTTAGCTTGTTCTGTAAGACAGACTCTGTAA
Protein sequence
MESSSQQISLDMNELYSFITAINERNPGINSFTWEASDCLPICITMQRPPPANSSQTQNNLGKTTLGLTFQAVLALFISTPSSSPPQLTRLFGAAVLLSFAVSFAGLFLQNAFPRIALLLGKIGAFIAAIGVCIITSLLLIHQNFAWISWLACGFFLMAFILSFRGQWHQNIGSLACSVRQTL
Homology
BLAST of Bhi12G000922 vs. NCBI nr
Match:
KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])
HSP 1 Score: 228.8 bits (582), Expect = 3.8e-56
Identity = 123/155 (79.35%), Postives = 133/155 (85.81%), Query Frame = 0
Query: 12 MNELYSFITAINERNPGINSFTWEASDCLPICITMQRPPPANSSQTQNNLGKTTLGLTFQ 71
MNELYSFITAINERNP INS LPICITMQRP PANSS+T+NN+GKT LGLTFQ
Sbjct: 1 MNELYSFITAINERNPEINS--------LPICITMQRPSPANSSKTENNVGKTILGLTFQ 60
Query: 72 AVLALFISTPSSSPPQLTRLFGAAVLLSFAVSFAGLFLQNAFPRIALLLGKIGAFIAAIG 131
AVLALFI++P+SSPP LT LF AAVL+SFAVSFAG+FLQN FPRIALL KIGA IAAIG
Sbjct: 61 AVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAAIG 120
Query: 132 VCIITSLLLIHQNFAWISWLACGFFLMAFILSFRG 167
VCI+ S LLIHQNFAWISWLA GF LMAF+LSFRG
Sbjct: 121 VCIVAS-LLIHQNFAWISWLASGFSLMAFVLSFRG 146
BLAST of Bhi12G000922 vs. NCBI nr
Match:
KGN49803.1 (hypothetical protein Csa_004681 [Cucumis sativus])
HSP 1 Score: 227.3 bits (578), Expect = 1.1e-55
Identity = 124/166 (74.70%), Postives = 137/166 (82.53%), Query Frame = 0
Query: 1 MESSSQQISLDMNELYSFITAINERNPGINSFTWEASDCLPICITMQRPPPANSSQTQNN 60
MESSSQQIS+DMN LYS IT+INERNP IN LPICI MQ PANSS+T+NN
Sbjct: 1 MESSSQQISIDMNHLYSLITSINERNPEING--------LPICIIMQTASPANSSKTENN 60
Query: 61 LGKTTLGLTFQAVLALFISTPSSSPPQLTRLFGAAVLLSFAVSFAGLFLQNAFPRIALLL 120
+G T LGLTFQAVLALFI++ +SSPP LT LFGAAVL+SFAVSF G+FLQ+ FPRIALL
Sbjct: 61 VGTTILGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLF 120
Query: 121 GKIGAFIAAIGVCIITSLLLIHQNFAWISWLACGFFLMAFILSFRG 167
KIGA IAAIGVCI+ S LLIHQNFAWISWLACGF LMAF+LSFRG
Sbjct: 121 EKIGALIAAIGVCILAS-LLIHQNFAWISWLACGFSLMAFLLSFRG 157
BLAST of Bhi12G000922 vs. NCBI nr
Match:
KAG6579137.1 (hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 167.5 bits (423), Expect = 1.0e-37
Identity = 97/166 (58.43%), Postives = 114/166 (68.67%), Query Frame = 0
Query: 1 MESSSQQISLDMNELYSFITAINERNPGINSFTWEASDCLPICITMQR-PPPANSSQTQN 60
M S+ Q +S+DMN+ ASD LP M R PPP +SSQT+N
Sbjct: 1 MGSTPQHVSIDMNQFCPI---------------QGASDGLPPTTAMPRPPPPPDSSQTRN 60
Query: 61 NLGKTTLGLTFQAVLALFISTPSSSPPQLTRLFGAAVLLSFAVSFAGLFLQNAFPRIALL 120
NLGK GLTFQAVLALFIS P+S PP L +F AA+L+SFA+S A LFLQ A+PRIAL
Sbjct: 61 NLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALFLQIAYPRIALS 120
Query: 121 LGKIGAFIAAIGVCIITSLLLIHQNFAWISWLACGFFLMAFILSFR 166
GKIGA +AAIG C ITS+LL HQ+F+WI WLACGF LMAFILSF+
Sbjct: 121 SGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK 151
BLAST of Bhi12G000922 vs. NCBI nr
Match:
KAA0050244.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98162.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])
HSP 1 Score: 165.2 bits (417), Expect = 5.2e-37
Identity = 94/166 (56.63%), Postives = 110/166 (66.27%), Query Frame = 0
Query: 2 ESSSQQISLDMNELYSFITAINERNPGINSFTW--EASDCLPICITMQRPPPANSSQTQN 61
E+ +ISLDMNELYSFITA+ RNPGI+S TW ASDCLPI I MQRP P NS Q
Sbjct: 3 ETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQ--- 62
Query: 62 NLGKTTLGLTFQAVLALFISTPSSSPPQLTRLFGAAVLLSFAVSFAGLFLQNAFPRIALL 121
G T + FQA+L LF++ P SPP L+ L G +L +F SF G+ LQ FP+IA L
Sbjct: 63 -FGNTFVSSNFQAILGLFLNLP-PSPPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHL 122
Query: 122 LGKIGAFIAAIGVCIITSLLLIHQNFAWISWLACGFFLMAFILSFR 166
L GA +AAIGVCI+ S LL H N WI WLACG L AFI SF+
Sbjct: 123 LQMFGALLAAIGVCIMGSPLL-HPNLTWIRWLACGLILPAFITSFK 162
BLAST of Bhi12G000922 vs. NCBI nr
Match:
XP_022146444.1 (uncharacterized protein LOC111015658 [Momordica charantia])
HSP 1 Score: 162.5 bits (410), Expect = 3.3e-36
Identity = 92/127 (72.44%), Postives = 99/127 (77.95%), Query Frame = 0
Query: 1 MESSSQQISLDMNELYSFITAINERNPGINSFTW-----EASDCLPICITMQRPPPANSS 60
M S+ QQ S+DMN L SFITAINERN GI+SFTW SDCLPICI MQRPPPA SS
Sbjct: 1 MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSS 60
Query: 61 QTQNNLGKTTLGLTFQAVLALFISTPSSSPPQLTRLFGAAVLLSFAVSFAGLFLQNAFPR 120
Q +LGKT LGLTFQAVLALFIS PSS P T LFGAAVL+SFAVSFAGLFLQ A+PR
Sbjct: 61 Q---SLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPR 120
Query: 121 IALLLGK 123
+ALL K
Sbjct: 121 MALLFEK 124
BLAST of Bhi12G000922 vs. ExPASy TrEMBL
Match:
A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1)
HSP 1 Score: 228.8 bits (582), Expect = 1.8e-56
Identity = 123/155 (79.35%), Postives = 133/155 (85.81%), Query Frame = 0
Query: 12 MNELYSFITAINERNPGINSFTWEASDCLPICITMQRPPPANSSQTQNNLGKTTLGLTFQ 71
MNELYSFITAINERNP INS LPICITMQRP PANSS+T+NN+GKT LGLTFQ
Sbjct: 1 MNELYSFITAINERNPEINS--------LPICITMQRPSPANSSKTENNVGKTILGLTFQ 60
Query: 72 AVLALFISTPSSSPPQLTRLFGAAVLLSFAVSFAGLFLQNAFPRIALLLGKIGAFIAAIG 131
AVLALFI++P+SSPP LT LF AAVL+SFAVSFAG+FLQN FPRIALL KIGA IAAIG
Sbjct: 61 AVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAAIG 120
Query: 132 VCIITSLLLIHQNFAWISWLACGFFLMAFILSFRG 167
VCI+ S LLIHQNFAWISWLA GF LMAF+LSFRG
Sbjct: 121 VCIVAS-LLIHQNFAWISWLASGFSLMAFVLSFRG 146
BLAST of Bhi12G000922 vs. ExPASy TrEMBL
Match:
A0A0A0KJN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1)
HSP 1 Score: 227.3 bits (578), Expect = 5.4e-56
Identity = 124/166 (74.70%), Postives = 137/166 (82.53%), Query Frame = 0
Query: 1 MESSSQQISLDMNELYSFITAINERNPGINSFTWEASDCLPICITMQRPPPANSSQTQNN 60
MESSSQQIS+DMN LYS IT+INERNP IN LPICI MQ PANSS+T+NN
Sbjct: 1 MESSSQQISIDMNHLYSLITSINERNPEING--------LPICIIMQTASPANSSKTENN 60
Query: 61 LGKTTLGLTFQAVLALFISTPSSSPPQLTRLFGAAVLLSFAVSFAGLFLQNAFPRIALLL 120
+G T LGLTFQAVLALFI++ +SSPP LT LFGAAVL+SFAVSF G+FLQ+ FPRIALL
Sbjct: 61 VGTTILGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLF 120
Query: 121 GKIGAFIAAIGVCIITSLLLIHQNFAWISWLACGFFLMAFILSFRG 167
KIGA IAAIGVCI+ S LLIHQNFAWISWLACGF LMAF+LSFRG
Sbjct: 121 EKIGALIAAIGVCILAS-LLIHQNFAWISWLACGFSLMAFLLSFRG 157
BLAST of Bhi12G000922 vs. ExPASy TrEMBL
Match:
A0A5D3BEH8 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00440 PE=4 SV=1)
HSP 1 Score: 165.2 bits (417), Expect = 2.5e-37
Identity = 94/166 (56.63%), Postives = 110/166 (66.27%), Query Frame = 0
Query: 2 ESSSQQISLDMNELYSFITAINERNPGINSFTW--EASDCLPICITMQRPPPANSSQTQN 61
E+ +ISLDMNELYSFITA+ RNPGI+S TW ASDCLPI I MQRP P NS Q
Sbjct: 3 ETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQ--- 62
Query: 62 NLGKTTLGLTFQAVLALFISTPSSSPPQLTRLFGAAVLLSFAVSFAGLFLQNAFPRIALL 121
G T + FQA+L LF++ P SPP L+ L G +L +F SF G+ LQ FP+IA L
Sbjct: 63 -FGNTFVSSNFQAILGLFLNLP-PSPPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHL 122
Query: 122 LGKIGAFIAAIGVCIITSLLLIHQNFAWISWLACGFFLMAFILSFR 166
L GA +AAIGVCI+ S LL H N WI WLACG L AFI SF+
Sbjct: 123 LQMFGALLAAIGVCIMGSPLL-HPNLTWIRWLACGLILPAFITSFK 162
BLAST of Bhi12G000922 vs. ExPASy TrEMBL
Match:
A0A6J1CY58 (uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015658 PE=4 SV=1)
HSP 1 Score: 162.5 bits (410), Expect = 1.6e-36
Identity = 92/127 (72.44%), Postives = 99/127 (77.95%), Query Frame = 0
Query: 1 MESSSQQISLDMNELYSFITAINERNPGINSFTW-----EASDCLPICITMQRPPPANSS 60
M S+ QQ S+DMN L SFITAINERN GI+SFTW SDCLPICI MQRPPPA SS
Sbjct: 1 MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSS 60
Query: 61 QTQNNLGKTTLGLTFQAVLALFISTPSSSPPQLTRLFGAAVLLSFAVSFAGLFLQNAFPR 120
Q +LGKT LGLTFQAVLALFIS PSS P T LFGAAVL+SFAVSFAGLFLQ A+PR
Sbjct: 61 Q---SLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPR 120
Query: 121 IALLLGK 123
+ALL K
Sbjct: 121 MALLFEK 124
BLAST of Bhi12G000922 vs. ExPASy TrEMBL
Match:
A0A0A0KJP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1)
HSP 1 Score: 161.4 bits (407), Expect = 3.6e-36
Identity = 91/166 (54.82%), Postives = 113/166 (68.07%), Query Frame = 0
Query: 1 MESSSQQISLDMNELYSFITAINERNPGINSFTWEASDCLPICITMQRPPPANSSQTQNN 60
M S+S Q SLDM+ SFI I++RN G+ S+CLP+ I MQ+ P A + +Q
Sbjct: 1 MASTSHQTSLDMSAFSSFIRTISQRNYGLGC-CCTPSNCLPVFIRMQQSPQATADSSQ-K 60
Query: 61 LGKTTLGLTFQAVLALFISTPSSSPPQ-LTRLFGAAVLLSFAVSFAGLFLQNAFPRIALL 120
LGK L L+FQAVLALFIS+P +SPP L F AAV +SFAVSFA LFL N+FPR A L
Sbjct: 61 LGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHL 120
Query: 121 LGKIGAFIAAIGVCIITSLLLIHQNFAWISWLACGFFLMAFILSFR 166
K+GA +A GVC I S LL+HQNFAWI W+AC F ++ F LSF+
Sbjct: 121 FEKVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAA0050246.1 | 3.8e-56 | 79.35 | putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... | [more] |
| KGN49803.1 | 1.1e-55 | 74.70 | hypothetical protein Csa_004681 [Cucumis sativus] | [more] |
| KAG6579137.1 | 1.0e-37 | 58.43 | hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAA0050244.1 | 5.2e-37 | 56.63 | putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... | [more] |
| XP_022146444.1 | 3.3e-36 | 72.44 | uncharacterized protein LOC111015658 [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7U7U1 | 1.8e-56 | 79.35 | Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A0A0KJN8 | 5.4e-56 | 74.70 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1 | [more] |
| A0A5D3BEH8 | 2.5e-37 | 56.63 | Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A6J1CY58 | 1.6e-36 | 72.44 | uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015... | [more] |
| A0A0A0KJP2 | 3.6e-36 | 54.82 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1 | [more] |
