Bhi12G000918 (gene) Wax gourd (B227) v1

Overview


Name	Bhi12G000918
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Transcription factor bHLH49-like
Location	chr12: 31773932 .. 31774361 (-)
RNA-Seq Expression	Bhi12G000918
Synteny	Bhi12G000918

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCTGGATGAAGCTGGGTTTAGTGGTGGTCAAGATGAGCGATGCACGGTTGGAGGTACCATCACAGAACCATCTACAGAAGGACTTTGTTTCAAGAAAAGGAAAAGGGGTGAGCAGGTAAACTATTATAATGTCTTTTCTCTCTTGTGTGTGATACTCAGGTGAGATGGAGGTAATCTTTAATTTCTTAGACTTGAATATTTGAATTGGTTAGAATGTGGACTTGGACAAGTTAAAGAAGCTCCAACAAATCAATGAAGCTGCAAAGAATGGAGCATTCAATCAGCAGAAGGGAGACCAAAACCCAAGTTCTACTACTAACAAGCCTGCTGGAAAGCAAGGAAAACAAGATTCTCAACCATCAGATGCTCCCAAGAAGAATACATTCACGTTAGAGCTCGAAGAGGGAGGCGACAAACAGCCATAG

mRNA sequence

ATGATTCTGGATGAAGCTGGGTTTAGTGGTGGTCAAGATGAGCGATGCACGGTTGGAGGTACCATCACAGAACCATCTACAGAAGGACTTTGTTTCAAGAAAAGGAAAAGGGGTGAGCAGAATGTGGACTTGGACAAGTTAAAGAAGCTCCAACAAATCAATGAAGCTGCAAAGAATGGAGCATTCAATCAGCAGAAGGGAGACCAAAACCCAAGTTCTACTACTAACAAGCCTGCTGGAAAGCAAGGAAAACAAGATTCTCAACCATCAGATGCTCCCAAGAAGAATACATTCACGTTAGAGCTCGAAGAGGGAGGCGACAAACAGCCATAG

Coding sequence (CDS)

ATGATTCTGGATGAAGCTGGGTTTAGTGGTGGTCAAGATGAGCGATGCACGGTTGGAGGTACCATCACAGAACCATCTACAGAAGGACTTTGTTTCAAGAAAAGGAAAAGGGGTGAGCAGAATGTGGACTTGGACAAGTTAAAGAAGCTCCAACAAATCAATGAAGCTGCAAAGAATGGAGCATTCAATCAGCAGAAGGGAGACCAAAACCCAAGTTCTACTACTAACAAGCCTGCTGGAAAGCAAGGAAAACAAGATTCTCAACCATCAGATGCTCCCAAGAAGAATACATTCACGTTAGAGCTCGAAGAGGGAGGCGACAAACAGCCATAG

Protein sequence

MILDEAGFSGGQDERCTVGGTITEPSTEGLCFKKRKRGEQNVDLDKLKKLQQINEAAKNGAFNQQKGDQNPSSTTNKPAGKQGKQDSQPSDAPKKNTFTLELEEGGDKQP

Homology

[Close]

BLAST of Bhi12G000918 vs. NCBI nr
Match: XP_004149484.2 (transcription factor bHLH49 [Cucumis sativus] >XP_031740931.1 transcription factor bHLH49 [Cucumis sativus] >XP_031740932.1 transcription factor bHLH49 [Cucumis sativus] >XP_031740933.1 transcription factor bHLH49 [Cucumis sativus] >XP_031740934.1 transcription factor bHLH49 [Cucumis sativus] >KGN49799.1 hypothetical protein Csa_004654 [Cucumis sativus])

HSP 1 Score: 154.5 bits (389), Expect = 5.5e-34
Identity = 80/103 (77.67%), Postives = 89/103 (86.41%), Query Frame = 0


Query: 4   DEAGFSGGQDERCTVGGTITEPSTEGLCFKKRKRGEQNVDLDKLKKL-QQINEAAKNGAF 63
           DEAGFSGGQDE+CT+GGT+TEPSTEGLCFKKRKRGEQNV L ++K+  QQINE AKNGAF
Sbjct: 244 DEAGFSGGQDEQCTMGGTMTEPSTEGLCFKKRKRGEQNVGLGQVKEAPQQINETAKNGAF 303

Query: 64  NQQKGDQNPSSTTNKPAGKQGKQDSQPSDAPKKNTFTLELEEG 106
           NQQKG QNPSSTT+KPAGKQGKQDSQPSDAPK+    +    G
Sbjct: 304 NQQKGGQNPSSTTSKPAGKQGKQDSQPSDAPKEEYIHVRARRG 346

[Close]

BLAST of Bhi12G000918 vs. NCBI nr
Match: KAA0050247.1 (transcription factor bHLH49-like [Cucumis melo var. makuwa] >TYJ98159.1 transcription factor bHLH49-like [Cucumis melo var. makuwa])

HSP 1 Score: 152.5 bits (384), Expect = 2.1e-33
Identity = 80/103 (77.67%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 4   DEAGFSGGQDERCTVGGTITEPSTEGLCFKKRKRGEQNVDLDKLKKL-QQINEAAKNGAF 63
           DEAGFSGGQDE+CT+GGTITEPSTEGLCFKKRKRGEQNV L ++K+  QQINE AKNGAF
Sbjct: 244 DEAGFSGGQDEQCTMGGTITEPSTEGLCFKKRKRGEQNVGLGRVKEASQQINETAKNGAF 303

Query: 64  NQQKGDQNPSSTTNKPAGKQGKQDSQPSDAPKKNTFTLELEEG 106
            QQKG QNPSSTT+KPAGKQGKQDSQPSDAPK+    +    G
Sbjct: 304 IQQKGGQNPSSTTSKPAGKQGKQDSQPSDAPKEEYIHVRARRG 346

[Close]

BLAST of Bhi12G000918 vs. NCBI nr
Match: XP_008466092.1 (PREDICTED: transcription factor bHLH49-like [Cucumis melo] >XP_008466100.1 PREDICTED: transcription factor bHLH49-like [Cucumis melo] >XP_016898796.1 PREDICTED: transcription factor bHLH49-like [Cucumis melo])

HSP 1 Score: 152.5 bits (384), Expect = 2.1e-33
Identity = 80/103 (77.67%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 4   DEAGFSGGQDERCTVGGTITEPSTEGLCFKKRKRGEQNVDLDKLKKL-QQINEAAKNGAF 63
           DEAGFSGGQDE+CT+GGTITEPSTEGLCFKKRKRGEQNV L ++K+  QQINE AKNGAF
Sbjct: 244 DEAGFSGGQDEQCTMGGTITEPSTEGLCFKKRKRGEQNVGLGRVKEASQQINETAKNGAF 303

Query: 64  NQQKGDQNPSSTTNKPAGKQGKQDSQPSDAPKKNTFTLELEEG 106
            QQKG QNPSSTT+KPAGKQGKQDSQPSDAPK+    +    G
Sbjct: 304 IQQKGGQNPSSTTSKPAGKQGKQDSQPSDAPKEEYIHVRARRG 346

[Close]

BLAST of Bhi12G000918 vs. NCBI nr
Match: KAG7032624.1 (Transcription factor bHLH49 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 136.0 bits (341), Expect = 2.0e-28
Identity = 72/105 (68.57%), Postives = 85/105 (80.95%), Query Frame = 0


Query: 4   DEAGFSGGQDERCTVGGTITEPSTEGLCFKKRKRGEQNVDLDKLKKL-QQINEAAKNGAF 63
           DEAGFSGGQDE+CT+GGTI EPS EGLCFKKRKRG++N++L ++K+  +QINE AKNGA 
Sbjct: 224 DEAGFSGGQDEQCTLGGTIAEPSREGLCFKKRKRGDRNMELAQVKEAPKQINETAKNGAL 283

Query: 64  NQQKG--DQNPSSTTNKPAGKQGKQDSQPSDAPKKNTFTLELEEG 106
            +Q G  DQNPS TTNKPAGKQGKQDSQPSDAPK+    +    G
Sbjct: 284 TRQNGDRDQNPSFTTNKPAGKQGKQDSQPSDAPKEEYIHVRARRG 328

[Close]

BLAST of Bhi12G000918 vs. NCBI nr
Match: KAG6601928.1 (Transcription factor basic helix-loop-helix 49, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 136.0 bits (341), Expect = 2.0e-28
Identity = 72/105 (68.57%), Postives = 85/105 (80.95%), Query Frame = 0


Query: 4   DEAGFSGGQDERCTVGGTITEPSTEGLCFKKRKRGEQNVDLDKLKKL-QQINEAAKNGAF 63
           DEAGFSGGQDE+CT+GGTI EPS EGLCFKKRKRG++N++L ++K+  +QINE AKNGA 
Sbjct: 224 DEAGFSGGQDEQCTLGGTIAEPSREGLCFKKRKRGDRNMELAQVKEAPKQINETAKNGAL 283

Query: 64  NQQKG--DQNPSSTTNKPAGKQGKQDSQPSDAPKKNTFTLELEEG 106
            +Q G  DQNPS TTNKPAGKQGKQDSQPSDAPK+    +    G
Sbjct: 284 TRQNGDRDQNPSFTTNKPAGKQGKQDSQPSDAPKEEYIHVRARRG 328

[Close]

BLAST of Bhi12G000918 vs. ExPASy TrEMBL
Match: A0A0A0KLP9 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G135350 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.7e-34
Identity = 80/103 (77.67%), Postives = 89/103 (86.41%), Query Frame = 0


Query: 4   DEAGFSGGQDERCTVGGTITEPSTEGLCFKKRKRGEQNVDLDKLKKL-QQINEAAKNGAF 63
           DEAGFSGGQDE+CT+GGT+TEPSTEGLCFKKRKRGEQNV L ++K+  QQINE AKNGAF
Sbjct: 244 DEAGFSGGQDEQCTMGGTMTEPSTEGLCFKKRKRGEQNVGLGQVKEAPQQINETAKNGAF 303

Query: 64  NQQKGDQNPSSTTNKPAGKQGKQDSQPSDAPKKNTFTLELEEG 106
           NQQKG QNPSSTT+KPAGKQGKQDSQPSDAPK+    +    G
Sbjct: 304 NQQKGGQNPSSTTSKPAGKQGKQDSQPSDAPKEEYIHVRARRG 346

[Close]

BLAST of Bhi12G000918 vs. ExPASy TrEMBL
Match: A0A1S3CQG6 (transcription factor bHLH49-like OS=Cucumis melo OX=3656 GN=LOC103503616 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.0e-33
Identity = 80/103 (77.67%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 4   DEAGFSGGQDERCTVGGTITEPSTEGLCFKKRKRGEQNVDLDKLKKL-QQINEAAKNGAF 63
           DEAGFSGGQDE+CT+GGTITEPSTEGLCFKKRKRGEQNV L ++K+  QQINE AKNGAF
Sbjct: 244 DEAGFSGGQDEQCTMGGTITEPSTEGLCFKKRKRGEQNVGLGRVKEASQQINETAKNGAF 303

Query: 64  NQQKGDQNPSSTTNKPAGKQGKQDSQPSDAPKKNTFTLELEEG 106
            QQKG QNPSSTT+KPAGKQGKQDSQPSDAPK+    +    G
Sbjct: 304 IQQKGGQNPSSTTSKPAGKQGKQDSQPSDAPKEEYIHVRARRG 346

[Close]

BLAST of Bhi12G000918 vs. ExPASy TrEMBL
Match: A0A5D3BGJ0 (Transcription factor bHLH49-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00400 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.0e-33
Identity = 80/103 (77.67%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 4   DEAGFSGGQDERCTVGGTITEPSTEGLCFKKRKRGEQNVDLDKLKKL-QQINEAAKNGAF 63
           DEAGFSGGQDE+CT+GGTITEPSTEGLCFKKRKRGEQNV L ++K+  QQINE AKNGAF
Sbjct: 244 DEAGFSGGQDEQCTMGGTITEPSTEGLCFKKRKRGEQNVGLGRVKEASQQINETAKNGAF 303

Query: 64  NQQKGDQNPSSTTNKPAGKQGKQDSQPSDAPKKNTFTLELEEG 106
            QQKG QNPSSTT+KPAGKQGKQDSQPSDAPK+    +    G
Sbjct: 304 IQQKGGQNPSSTTSKPAGKQGKQDSQPSDAPKEEYIHVRARRG 346

[Close]

BLAST of Bhi12G000918 vs. ExPASy TrEMBL
Match: A0A6J1JSJ9 (transcription factor bHLH49-like OS=Cucurbita maxima OX=3661 GN=LOC111487458 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 8.3e-28
Identity = 70/105 (66.67%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 4   DEAGFSGGQDERCTVGGTITEPSTEGLCFKKRKRGEQNVDLDKLKKL-QQINEAAKNGAF 63
           DE GFSGGQDE+CT+GGTI EPS EGLCFKKRKRG++N++L ++K+  +QINE AKNGA 
Sbjct: 227 DETGFSGGQDEQCTLGGTIAEPSREGLCFKKRKRGDRNMELAQVKEAPKQINETAKNGAL 286

Query: 64  NQQKG--DQNPSSTTNKPAGKQGKQDSQPSDAPKKNTFTLELEEG 106
            +Q G  DQNPS TTNKPAGKQGKQDSQPSD PK+    +    G
Sbjct: 287 TRQNGDKDQNPSFTTNKPAGKQGKQDSQPSDVPKEEYIHVRARRG 331

[Close]

BLAST of Bhi12G000918 vs. ExPASy TrEMBL
Match: A0A6J1E6U0 (transcription factor bHLH49-like OS=Cucurbita moschata OX=3662 GN=LOC111430469 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.4e-27
Identity = 70/105 (66.67%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 4   DEAGFSGGQDERCTVGGTITEPSTEGLCFKKRKRGEQNVDLDKLKKL-QQINEAAKNGAF 63
           DE GFSGGQDE+CT+GGTI EPS EGLCFKKRKRG++N++L ++K+  +QINE AKNGA 
Sbjct: 227 DETGFSGGQDEQCTLGGTIAEPSREGLCFKKRKRGDRNMELAQVKEASKQINETAKNGAL 286

Query: 64  NQQKG--DQNPSSTTNKPAGKQGKQDSQPSDAPKKNTFTLELEEG 106
             Q G  DQNPS TTNK AGKQGKQDSQPSDAPK+    +    G
Sbjct: 287 TWQNGDKDQNPSFTTNKAAGKQGKQDSQPSDAPKEEYIHVRARRG 331

The following BLAST results are available for this feature:

BLAST of Bhi12G000918 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12G000918 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12G000918 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149484.2	5.5e-34	77.67	transcription factor bHLH49 [Cucumis sativus] >XP_031740931.1 transcription fact...	[more]
KAA0050247.1	2.1e-33	77.67	transcription factor bHLH49-like [Cucumis melo var. makuwa] >TYJ98159.1 transcri...	[more]
XP_008466092.1	2.1e-33	77.67	PREDICTED: transcription factor bHLH49-like [Cucumis melo] >XP_008466100.1 PREDI...	[more]
KAG7032624.1	2.0e-28	68.57	Transcription factor bHLH49 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6601928.1	2.0e-28	68.57	Transcription factor basic helix-loop-helix 49, partial [Cucurbita argyrosperma ...	[more]

BLAST of Bhi12G000918 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLP9	2.7e-34	77.67	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G135350 PE=4 S...	[more]
A0A1S3CQG6	1.0e-33	77.67	transcription factor bHLH49-like OS=Cucumis melo OX=3656 GN=LOC103503616 PE=4 SV...	[more]
A0A5D3BGJ0	1.0e-33	77.67	Transcription factor bHLH49-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1JSJ9	8.3e-28	66.67	transcription factor bHLH49-like OS=Cucurbita maxima OX=3661 GN=LOC111487458 PE=...	[more]
A0A6J1E6U0	5.4e-27	66.67	transcription factor bHLH49-like OS=Cucurbita moschata OX=3662 GN=LOC111430469 P...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..95
None	No IPR available	PANTHER	PTHR12565:SF403	TRANSCRIPTION FACTOR BHLH49	coord: 4..95
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 4..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M000918	Bhi12M000918	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity