Homology
BLAST of Bhi12G000832 vs. TAIR 10
Match:
AT1G14790.1 (RNA-dependent RNA polymerase 1 )
HSP 1 Score: 1256.1 bits (3249), Expect = 0.0e+00
Identity = 641/1102 (58.17%), Postives = 800/1102 (72.60%), Query Frame = 0
Query: 1 MGKTIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRISKPKDEKTRFTFVTVRFKSELAA 60
MGKTI+++GF V+ +EVK+FLE TG GTV +++ +PK R + V+F SE
Sbjct: 1 MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPR-VYAIVQFTSERHT 60
Query: 61 EYIVEKATAAEKKLWFGSSYLKAREVERASPARGGGEMERMEDVKGHLGSLISKDKMRVI 120
I+ TAA ++L++G SYLKA EVE+ + + + +K G +S K +
Sbjct: 61 RLII---TAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTL 120
Query: 121 WEGENWNVEFGIGVRKLSFYLS-YEVEYKMELAFENILGVEFRCPLNQPSKFFLIQLQGA 180
W ++ V FGIG+RKL F S Y+ +Y++EL++ENI ++ P + SKF +IQ+ GA
Sbjct: 121 WSAQDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGA 180
Query: 181 PRIFKKSRSSSSSRLNSNEFCF-----RWIRDVDFTPSSCIGQSFALCLELSPGHHLPPF 240
P+IF+K + +F +WIR DFT SSCIGQS A CLEL ++P F
Sbjct: 181 PKIFEKEDQPINLLFGIMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDF 240
Query: 241 FQNLVGYKETYA-PFILQTGSSFSSISN-LVPIITPPRGFDISYKTLFKINALVQHGYLP 300
+N Y E A F++++GSS+SS +N LVP++ PP GF + ++ LFK+N LVQ+ L
Sbjct: 241 RENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLS 300
Query: 301 GPTLDDEFFRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKHHYLSFYTSNQLPWKP 360
GP LD +F+RL++ ++ ++H LEK+F+L ECCYEP WL+ Y + + +LP P
Sbjct: 301 GPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSP 360
Query: 361 NISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEDLDKLHS 420
ISLDDGLVY++RVQ+TP++VYF GPE N+SNRV+R + I+NFLRVSFVDEDL+K+ S
Sbjct: 361 TISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRS 420
Query: 421 IDLAPRSSSAGNSERTRVYDRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWMFASREG 480
+DL+PRSS+ RT++YDRI SVLR+GIVIGDKKFEFLAFS+SQLRENS WMFA +
Sbjct: 421 MDLSPRSST---QRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDR 480
Query: 481 LSAADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEHEFEVIPDVEVERKKTKYC 540
++AA IR WMGDF IRNVAKYAARLGQSF SSR+TL V E EVIPDVE+ T+Y
Sbjct: 481 ITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYV 540
Query: 541 FSDGIGKISKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKY 600
FSDGIGKIS A KVA KCGL +PSAFQIRY GYKGVVA+DP KKLSLRKSM K+
Sbjct: 541 FSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKF 600
Query: 601 MSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSKAL 660
S +T+LDVL WSKYQPC++NRQ+I LLSTLG+ D VF KKQ+E +D+LD+IL P +A
Sbjct: 601 ESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAH 660
Query: 661 EVLELMSPGEMTGILKELLLF-YKPNEEPFLNMMLRTFRADKFLDLRTKSRIFVPKGRTM 720
E L LM+PGE T ILK L+L YKP+ EPFL+MML+ FRA K L+LRTK+RIF+ GR+M
Sbjct: 661 EALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSM 720
Query: 721 MGCLDETRTLEYGQVFVHCSIPGRSNESNFVIKGKVVVAKNPCLHPGDVRVLDAVDVKAL 780
MGCLDETRTLEYGQV V S P R F+I G VVVAKNPCLHPGDVRVL AV+V AL
Sbjct: 721 MGCLDETRTLEYGQVVVQYSDPMRPGR-RFIITGPVVVAKNPCLHPGDVRVLQAVNVPAL 780
Query: 781 HHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTMQLDH 840
+HMVDCVVFPQKG RPHPNECSGSDLDGD+YFVCWD EL + +PM Y P PT LDH
Sbjct: 781 NHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDYTPEPTQILDH 840
Query: 841 DVTIEEVQEYLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKLAKLFSIAVDFPKTG 900
DVTIEEV+EY ANY+VND LG IANAHT FADK P KA S CI+LAK FS AVDFPKTG
Sbjct: 841 DVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFPKTG 900
Query: 901 VPANLPRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSSDVNTLEIFTREVAINC 960
V A +P++L V EYPDFM+KP+KPTY S V+GKLF+ VK+ + + +++ FT +VA
Sbjct: 901 VAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVASKS 960
Query: 961 YDPDMEVDGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRND 1020
YD DMEVDGF++Y+ EAF K YDFKLGNLMDYYGIKTE E++SG I+RM+KSF KR D
Sbjct: 961 YDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTKRRD 1020
Query: 1021 LEQITFAMKSLRKEARAWFNEKGSKSTYDNSKGEEEEYAKASAWYHVTYHPDYWGRYNEG 1080
E I A+++LRKE + FN S+ EE E AKASAWYHVTYH YWG YNEG
Sbjct: 1021 AESIGRAVRALRKETLSLFNA---------SEEEENESAKASAWYHVTYHSSYWGLYNEG 1080
Query: 1081 MQRDHFLSFPWCVADKLIQIKR 1094
+ RDHFLSF WCV DKL++IK+
Sbjct: 1081 LNRDHFLSFAWCVYDKLVRIKK 1085
BLAST of Bhi12G000832 vs. TAIR 10
Match:
AT4G11130.1 (RNA-dependent RNA polymerase 2 )
HSP 1 Score: 740.0 bits (1909), Expect = 2.9e-213
Identity = 441/1152 (38.28%), Postives = 652/1152 (56.60%), Query Frame = 0
Query: 4 TIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRIS------KPKD-EKTRFTFVTVRFKS 63
T++I + DE+ FLE H G+ TV + I KP+D + +FT + V+ ++
Sbjct: 11 TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRA 70
Query: 64 ELAAEYIVEKATAAEKKLWFGSSYLKAREVERASPARGGGEMERMEDVKGHLGSLISKDK 123
+L +++ KL F + L+ E R +R++D+ +G S +K
Sbjct: 71 QL---------LSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEK 130
Query: 124 MRVI---WEGEN-WNVEFGIGVRKLSFYLSYEVE-YKMELAFENILGVEFRCPLNQPSKF 183
W+G W + R++ F++ + YK+E+ FE+I+ C S+
Sbjct: 131 RFCALEKWDGVRCWIL---TEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEI 190
Query: 184 --FLIQLQGAPRIFKKSRSSSSSRLNSN-------EFCFRWIRDVDFTPSSCIGQSFALC 243
FL++L+ P++FK+ +++ S+ +F F WIR DF+ S IG S C
Sbjct: 191 DAFLLKLKYGPKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFC 250
Query: 244 LELSPGHHLPPFFQNLVGYKETYAPFILQTGSSFSSISNLVPIITPP-RGFDISYKTLFK 303
LE+ G + F L Y+E G +F+S + +VP++ G + Y+ LF+
Sbjct: 251 LEVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQ 310
Query: 304 INALVQHGYLP-GPTLDDEFFRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKHHYL 363
+NALV + D E +++ V L+K+ CY+P ++K
Sbjct: 311 LNALVHAQKISLFAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVKTQMQ 370
Query: 364 SFYTSNQLPWKPNIS----LDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDN 423
S ++ P + + ++ R +TPSK+Y GPE +N VV+ F + + +
Sbjct: 371 S--VVKKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSD 430
Query: 424 FLRVSFVDEDLDKLHSIDLAPRSSSA--GNSERTRVYDRILSVLRNGIVIGDKKFEFLAF 483
F+RV+FV+ED KL + L+ S RT +Y+R+LS+L GI +G K+FEFLAF
Sbjct: 431 FMRVTFVEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAF 490
Query: 484 SASQLRENSFWMFASREGLSAADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEH 543
SASQLR NS WMFAS E + A DIREWMG FR+IR+++K AAR+GQ F +SR+TL V
Sbjct: 491 SASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQ 550
Query: 544 EFEVIPDVEVERKKTKYCFSDGIGKISKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVA 603
+ E IPD+EV YCFSDGIGKIS A++VA+KCGL SH PSAFQIRY GYKGV+A
Sbjct: 551 DVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIA 610
Query: 604 IDPTLKKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQ 663
+D + +KLSLR SMLK+ S + L+V W++ PCFLNR++I LLSTLGI+D +F Q
Sbjct: 611 VDRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQ 670
Query: 664 KEAIDQLDSILEDPSKALEVLELMSPGEMTGIL-KELLLFYKPNEEPFLNMMLRTFRADK 723
+ L ++LED AL VL+ +S +L K LL Y P+ EP+L+MMLR +
Sbjct: 671 AVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQ 730
Query: 724 FLDLRTKSRIFVPKGRTMMGCLDETRTLEYGQVFVHCSIP------------GRSNESNF 783
+L+++ RI VPKGR ++GC+DE LEYGQV+V ++ + +E
Sbjct: 731 LSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETS 790
Query: 784 VIKGKVVVAKNPCLHPGDVRVLDAVDVKALHH--MVDCVVFPQKGKRPHPNECSGSDLDG 843
V+ GKVVV KNPCLHPGD+RVLDA+ +DC++FPQKG+RPHPNECSG DLDG
Sbjct: 791 VVIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDG 850
Query: 844 DLYFVCWDPELTCIKPVKPMSYEPAPTMQLDHDVTIEEVQEYLANYMVNDGLGAIANAHT 903
D +FV WD ++ + PM Y + +DHDVT+EE+ ++ +YM++D LG I+ AH
Sbjct: 851 DQFFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHL 910
Query: 904 VFADKNPKKAMSTECIKLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYAS 963
V AD++P+KA S +C++LA L S AVDF KTG PA +P L+ E+PDF+++ KPTY S
Sbjct: 911 VHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYIS 970
Query: 964 NGVLGKLFQGVKDVSSDVNTLEIFTREVAINCYDPDMEVDGFDKYLSEAFDYKTRYDFKL 1023
V GKL++ VK + VA YD +E GF+ ++ A ++ Y KL
Sbjct: 971 ESVFGKLYRAVKSSLAQRKPEAESEDTVA---YDVTLEEAGFESFIETAKAHRDMYGEKL 1030
Query: 1024 GNLMDYYGIKTEPELVSGNI----LRMAKSFDKRNDL-EQITFAMKSLRKEARAWFNEKG 1083
+LM YYG E E+++G + + +A+ + D+ ++IT ++K L KEA WF +
Sbjct: 1031 TSLMIYYGAANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEK-- 1090
Query: 1084 SKSTYDNSKGEEEEYAKASAWYHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKRE 1107
+ + E+++ ASAWY+VTY+P N ++ FLSFPW V D L+ IK E
Sbjct: 1091 ------SCEDEQQKKKLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAE 1128
BLAST of Bhi12G000832 vs. TAIR 10
Match:
AT3G49500.1 (RNA-dependent RNA polymerase 6 )
HSP 1 Score: 577.4 bits (1487), Expect = 2.5e-164
Identity = 391/1069 (36.58%), Postives = 571/1069 (53.41%), Query Frame = 0
Query: 108 LGSLISKDKMRVIW--EGENWNVEFGIGVRKLSFYLS-------------YEVEYKMELA 167
+G+L+S+D V W EG ++ V+ K F S +YK+EL
Sbjct: 139 IGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLELL 198
Query: 168 FENILGVEFRCPLNQPSKFFLIQLQGAPRIFKKSRSSS------SSRLNSNEFCFRWIRD 227
+I V L+ ++QL +PR++ ++ L+ ++ WIR
Sbjct: 199 VRDIQTVRQYKTLH--GFVLILQLASSPRVWYRTADDDIYDTVPGDLLDDDD---PWIRT 258
Query: 228 VDFTPSSCIGQSFALCLELSPGHH------LPPFFQNLVGYKETYAPFILQTGSSFSS-I 287
DFT IG+ + + +SP + L F V + P ++ F +
Sbjct: 259 TDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVRWPPRIRNEPCFGEPV 318
Query: 288 SNLVPIITPPRGFDISYKTLFKINALVQHGYLPGPTLDDEFFRLVDSSRFRPDYVEHA-L 347
S+ I G IS++ +F +N+++ G L + FF L+ R +P V A L
Sbjct: 319 SDHFFCIHHKEG--ISFEIMFLVNSVLHRGVFNQFQLTERFFDLL---RNQPKDVNIASL 378
Query: 348 EKMFNLKECCYEPQKWLKHHYLSFYTSNQLPWKPNISLDDGLVYVHRVQITPSKVYFRGP 407
+ + K ++ K LK + +L S D + + R+ ITP++ Y P
Sbjct: 379 KHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSED--ISEIRRLVITPTRAYCLPP 438
Query: 408 EANLSNRVVRRFIDDIDNFLRVSFVDEDLDKLHS-------IDLAPRSSSAGNSERTRVY 467
E LSNRV+RR+ + FLRV+F+DE + ++S + +S+ S++T V+
Sbjct: 439 EVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVF 498
Query: 468 DRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSAADIREWMGDFREIRNV 527
R+ S+L +G + +K+ FLAFSA+QLR+ S W FA +DI+ WMG F++ +NV
Sbjct: 499 KRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKFKD-KNV 558
Query: 528 AKYAARLGQSFGSSRKTLCVEEHEFEV-IPDVEVERKKTKYCFSDGIGKISKTLAEKVAE 587
AK AAR+G F S+ T+ V HE + +PD+E + Y FSDGIG I+ LA++V E
Sbjct: 559 AKCAARMGLCFSSTYATVDVMPHEVDTEVPDIE----RNGYVFSDGIGTITPDLADEVME 618
Query: 588 KCGL-ISHTPSAFQIRYAGYKGVVAIDPTLKK--KLSLRKSMLKYMSLDTQLDVLLWSKY 647
K L + ++P A+QIRYAG+KGVVA P+ +L+LR SM K+ S T L++ W+++
Sbjct: 619 KLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSWTRF 678
Query: 648 QPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSKALEVLELMSPGEMTGIL 707
QP FLNRQ+I LLS LG+ D +F Q+ + +L+ IL+D A EVL +
Sbjct: 679 QPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGNTAA 738
Query: 708 KELLLFYKPNEEPFLNMMLRTFRADKFLDLRTKSRIFVPKGRTMMGCLDETRTLEYGQVF 767
L +KP EP L ML + R + LR KSRIFV GR +MGCLDE LE+GQ F
Sbjct: 739 IMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCF 798
Query: 768 VHCSIPGRSN-----ESNF--------VIKGKVVVAKNPCLHPGDVRVLDAVDVKALHHM 827
+ S P N S F V+KG V +AKNPCLHPGDVR+L+AVDV LHHM
Sbjct: 799 IQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQLHHM 858
Query: 828 VDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPEL--TCIKPVKPMSYEPAPTMQLDHD 887
DC++FPQKG RPH NE SGSDLDGDLYFV WD +L K M Y+ A L
Sbjct: 859 YDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRA 918
Query: 888 VTIEEVQEYLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKLAKLFSIAVDFPKTGV 947
V +++ ++ A + N+ LG I NAH V AD++ AM EC+ LA+L + AVDFPKTG
Sbjct: 919 VNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKTGK 978
Query: 948 PANLPRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDV-SSDVNTLEIFTREVAINC 1007
++P +L+ YPDFM K + TY SN +LG+L++ VK+V D + + +
Sbjct: 979 IVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEESTDPSAIP 1038
Query: 1008 YDPDMEVDGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRND 1067
YD +E+ GF+ + EA+ +K YD +L L+ Y ++ E E+V+G+I M K K+
Sbjct: 1039 YDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQG 1098
Query: 1068 --LEQITFAMKSLRKEARAWFNEKGSKSTYDNSKGEEEEY---AKASAWYHVTYHPDYWG 1108
E++ + SL+KE R F E + ++N EE+ KASAWYHVTYHP++
Sbjct: 1099 ELKERLKHSYNSLKKEFRKVFEE--TIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVK 1158
BLAST of Bhi12G000832 vs. TAIR 10
Match:
AT2G19930.1 (RNA-dependent RNA polymerase family protein )
HSP 1 Score: 137.1 bits (344), Expect = 8.6e-32
Identity = 212/880 (24.09%), Postives = 357/880 (40.57%), Query Frame = 0
Query: 329 YEPQKW--LKHHYLSFYTSNQLPWKPNISLDDGLVYVHRVQITPSKVY-------FRGPE 388
YE W L HY L W D G + ++ + P+ Y +GP
Sbjct: 174 YEAAVWDRLGRHYCPQKDRRMLQW------DSGKTHYYQCNVAPNGSYTFKVLSALQGPL 233
Query: 389 ANLSNRVVRRFIDDIDNFLRVSFVDEDLDKLHSIDLAPRSSSAGNSERTRVYDRILSVLR 448
+ + + + D DN L V F D +SSS + + Y + +
Sbjct: 234 LEHTGTHLHKVLGD-DNVLTVKFAD-----------VQKSSSTYSIDHYFTYK---GIAK 293
Query: 449 NGIVIGDKKFEFLAFSASQLRE-------------------NSFWMFASREGLSAADIRE 508
NGI+IG ++++F F E +F+ + L+ I E
Sbjct: 294 NGIMIGLRRYQFFVFKDGGKEEKKKDLSTKKVKCYFIRTDSTAFYDMQNPYILTGKSIYE 353
Query: 509 WMGDFREIR---NVAKYAARLGQSFGSSRKTLCVEEH--EFEVIPDV--------EVERK 568
F + +A Y AR S KTL V+ F+ I D+ +V K
Sbjct: 354 ARMHFMHVHRAPTLANYMARFSLIL-SKTKTLEVDMTGITFDQIDDIHCHDQDGKDVLDK 413
Query: 569 KTKYCF-SDGIGKISKTLA---------------EKVAEKCGLISHTPSAFQIRYAGY-- 628
K C SDG G IS+ LA E + E C F++ Y GY
Sbjct: 414 NKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMFYDGYAV 473
Query: 629 KGVVAIDPTL-KKKLSLRKSMLKY--------MSLDTQLDVLLWSK-YQPCFLNRQVINL 688
KG ++ L + + +R SM+K S L+V+ S + L++ ++ L
Sbjct: 474 KGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVAL 533
Query: 689 LSTLGIKDRVFVKKQKEAIDQLDSILEDPSKALEVLELMSPGEMTG-ILKELLLFYKPNE 748
LS GI + F+ +++ SI + AL ++ GEM +++L P +
Sbjct: 534 LSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNA--ALNYGEMDDQNAAQMILVGIPLD 593
Query: 749 EPFLNMMLRTFRADKFLDLRTKSRIFVPKGRTMMGCLDETRTLEYGQVFVHCSIPGRSNE 808
EP L L + DL+ ++ V + +MG +D T L+ +V V
Sbjct: 594 EPHLKNYLSILLKTEKNDLKA-GKLPVTESYYLMGTVDPTGALKEDEVCVIL-------- 653
Query: 809 SNFVIKGKVVVAKNPCLHPGDVRVLDAVDVKALHHMVD----CVVFPQKGKRPHPNECSG 868
+ I G+V+V +NP LH GD+ +L A VKAL V V FPQKG R +E +G
Sbjct: 654 ESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAG 713
Query: 869 SDLDGDLYFVCWDPE-LTCIKPVKPMSYEPAPTM----QLDHDVTIEEVQEYL------A 928
D DGD+YF+ +PE L KP +P P+ + ++ EE++E L A
Sbjct: 714 GDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLTA 773
Query: 929 NYMVNDGLGAIANAHTVFADK---------NPKKAMSTECIKLAKLFSIAVDFPKTGVPA 988
+ ++ +G A++ D+ K M + ++L ++ A+D PK G
Sbjct: 774 GFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKGDKV 833
Query: 989 NLPRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSSDVNTLEIFTREVA-INCYD 1048
LP L+ +P +M++ K + S +LG +F VK +++ + + E++ + C++
Sbjct: 834 YLPNKLKPDIFPHYMERDKK--FQSTSILGLIFDFVKSQTTEEPSP---SSEISKLPCFE 893
Query: 1049 PDMEVDGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRNDLE 1108
D+ +SE K R + Y +TE + A DK
Sbjct: 894 --------DEPVSEFHMQKCR--------LWYDNYRTE--------MTQAMKTDKDESAN 953
BLAST of Bhi12G000832 vs. TAIR 10
Match:
AT2G19910.1 (RNA-dependent RNA polymerase family protein )
HSP 1 Score: 118.2 bits (295), Expect = 4.1e-26
Identity = 159/660 (24.09%), Postives = 279/660 (42.27%), Query Frame = 0
Query: 521 DVEVERKKTKYCF-SDGIGKISKTLA---------------EKVAEK---------CGLI 580
D +V K K C SDG G IS+ LA + K CG
Sbjct: 389 DKDVLDKNGKPCIHSDGTGYISEDLARMCPVNIFKGKSMRSNNIQSKNLNFEGQGPCGQE 448
Query: 581 SHTPSAFQIRYAGY--KGVVAIDPTL-KKKLSLRKSMLKY--------MSLDTQLDVLLW 640
F+I Y GY KG + L + + +R SM+K +S L+V+
Sbjct: 449 PPLLIQFRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTT 508
Query: 641 SK-YQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSKALEVLELMSPGEM 700
S + L+R ++ LLS G+ + F+ + +++ +I A + +
Sbjct: 509 SNPPRKARLSRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYGDDQY 568
Query: 701 TGILKELLLFYKPNEEPF----LNMMLRTFRADKFLDLRTKSRIFVPKGRTMMGCLDETR 760
T +++L P +EP+ L+ +L+T R + R + + +MG +D T
Sbjct: 569 TA---DMILVGIPLDEPYLKDRLSYLLKTER-----NALKAGRFPIDESYYIMGTVDPTG 628
Query: 761 TLEYGQVFVHCSIPGRSNESNFVIKGKVVVAKNPCLHPGDVRVLDAVDVKALHHMVD--- 820
L+ ++ C I I G V+V +NP LH GD+ VL A VKAL V
Sbjct: 629 ELKENEI---CVILHSGQ-----ISGDVLVYRNPGLHFGDIHVLKATYVKALEDYVGNAK 688
Query: 821 -CVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPE-LTCIKPVKPMSYEPAPTM----QLD 880
V FPQKG R +E +G D DGD+YF+ +P+ L KP +P P+ +
Sbjct: 689 FAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSSSKPSKIYCGRKP 748
Query: 881 HDVTIEEVQEYL------ANYMVNDGLG-------AIANAHTVFADKNPKKAMSTE--CI 940
+++ EE++E L A + D +G I + D++ K+ + +
Sbjct: 749 SELSEEELEEELFKMFLKARFCKRDVIGMAADCWLGIMDPFLTLGDESAKEKYERKKNIL 808
Query: 941 KLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSS 1000
KL ++ A+D PK G +LP +L + +P +M++ K + S +LG +F D
Sbjct: 809 KLIDIYYDALDAPKKGAKVDLPPDLEIKNFPHYMERDPKRDFRSTSILGLIF----DTVD 868
Query: 1001 DVNTLEIFTREVAINCYDPDMEV--DGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPE 1060
N E E++ Y D V DK+ S +Y++
Sbjct: 869 SHNAEEPPPSEISKLWYFEDEPVPKSHMDKFTSWYENYRS-------------------- 928
Query: 1061 LVSGNILRMAKSFDKRNDLEQITFAMKSLRKEARAWFNEKGSKSTYDNSKGEEEEYAKAS 1109
M+++ + + +++ + +++ + ++ G + D++K EE Y +A
Sbjct: 929 -------EMSQAMMETDKVKRNQLTNEVIQRYKQDFYGAAGFE---DSNKSLEELYPQAL 988
BLAST of Bhi12G000832 vs. ExPASy Swiss-Prot
Match:
Q9LQV2 (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1)
HSP 1 Score: 1256.1 bits (3249), Expect = 0.0e+00
Identity = 641/1102 (58.17%), Postives = 800/1102 (72.60%), Query Frame = 0
Query: 1 MGKTIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRISKPKDEKTRFTFVTVRFKSELAA 60
MGKTI+++GF V+ +EVK+FLE TG GTV +++ +PK R + V+F SE
Sbjct: 1 MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPR-VYAIVQFTSERHT 60
Query: 61 EYIVEKATAAEKKLWFGSSYLKAREVERASPARGGGEMERMEDVKGHLGSLISKDKMRVI 120
I+ TAA ++L++G SYLKA EVE+ + + + +K G +S K +
Sbjct: 61 RLII---TAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTL 120
Query: 121 WEGENWNVEFGIGVRKLSFYLS-YEVEYKMELAFENILGVEFRCPLNQPSKFFLIQLQGA 180
W ++ V FGIG+RKL F S Y+ +Y++EL++ENI ++ P + SKF +IQ+ GA
Sbjct: 121 WSAQDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGA 180
Query: 181 PRIFKKSRSSSSSRLNSNEFCF-----RWIRDVDFTPSSCIGQSFALCLELSPGHHLPPF 240
P+IF+K + +F +WIR DFT SSCIGQS A CLEL ++P F
Sbjct: 181 PKIFEKEDQPINLLFGIMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDF 240
Query: 241 FQNLVGYKETYA-PFILQTGSSFSSISN-LVPIITPPRGFDISYKTLFKINALVQHGYLP 300
+N Y E A F++++GSS+SS +N LVP++ PP GF + ++ LFK+N LVQ+ L
Sbjct: 241 RENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLS 300
Query: 301 GPTLDDEFFRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKHHYLSFYTSNQLPWKP 360
GP LD +F+RL++ ++ ++H LEK+F+L ECCYEP WL+ Y + + +LP P
Sbjct: 301 GPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSP 360
Query: 361 NISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEDLDKLHS 420
ISLDDGLVY++RVQ+TP++VYF GPE N+SNRV+R + I+NFLRVSFVDEDL+K+ S
Sbjct: 361 TISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRS 420
Query: 421 IDLAPRSSSAGNSERTRVYDRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWMFASREG 480
+DL+PRSS+ RT++YDRI SVLR+GIVIGDKKFEFLAFS+SQLRENS WMFA +
Sbjct: 421 MDLSPRSST---QRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDR 480
Query: 481 LSAADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEHEFEVIPDVEVERKKTKYC 540
++AA IR WMGDF IRNVAKYAARLGQSF SSR+TL V E EVIPDVE+ T+Y
Sbjct: 481 ITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYV 540
Query: 541 FSDGIGKISKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKY 600
FSDGIGKIS A KVA KCGL +PSAFQIRY GYKGVVA+DP KKLSLRKSM K+
Sbjct: 541 FSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKF 600
Query: 601 MSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSKAL 660
S +T+LDVL WSKYQPC++NRQ+I LLSTLG+ D VF KKQ+E +D+LD+IL P +A
Sbjct: 601 ESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAH 660
Query: 661 EVLELMSPGEMTGILKELLLF-YKPNEEPFLNMMLRTFRADKFLDLRTKSRIFVPKGRTM 720
E L LM+PGE T ILK L+L YKP+ EPFL+MML+ FRA K L+LRTK+RIF+ GR+M
Sbjct: 661 EALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSM 720
Query: 721 MGCLDETRTLEYGQVFVHCSIPGRSNESNFVIKGKVVVAKNPCLHPGDVRVLDAVDVKAL 780
MGCLDETRTLEYGQV V S P R F+I G VVVAKNPCLHPGDVRVL AV+V AL
Sbjct: 721 MGCLDETRTLEYGQVVVQYSDPMRPGR-RFIITGPVVVAKNPCLHPGDVRVLQAVNVPAL 780
Query: 781 HHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTMQLDH 840
+HMVDCVVFPQKG RPHPNECSGSDLDGD+YFVCWD EL + +PM Y P PT LDH
Sbjct: 781 NHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDYTPEPTQILDH 840
Query: 841 DVTIEEVQEYLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKLAKLFSIAVDFPKTG 900
DVTIEEV+EY ANY+VND LG IANAHT FADK P KA S CI+LAK FS AVDFPKTG
Sbjct: 841 DVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFPKTG 900
Query: 901 VPANLPRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSSDVNTLEIFTREVAINC 960
V A +P++L V EYPDFM+KP+KPTY S V+GKLF+ VK+ + + +++ FT +VA
Sbjct: 901 VAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVASKS 960
Query: 961 YDPDMEVDGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRND 1020
YD DMEVDGF++Y+ EAF K YDFKLGNLMDYYGIKTE E++SG I+RM+KSF KR D
Sbjct: 961 YDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTKRRD 1020
Query: 1021 LEQITFAMKSLRKEARAWFNEKGSKSTYDNSKGEEEEYAKASAWYHVTYHPDYWGRYNEG 1080
E I A+++LRKE + FN S+ EE E AKASAWYHVTYH YWG YNEG
Sbjct: 1021 AESIGRAVRALRKETLSLFNA---------SEEEENESAKASAWYHVTYHSSYWGLYNEG 1080
Query: 1081 MQRDHFLSFPWCVADKLIQIKR 1094
+ RDHFLSF WCV DKL++IK+
Sbjct: 1081 LNRDHFLSFAWCVYDKLVRIKK 1085
BLAST of Bhi12G000832 vs. ExPASy Swiss-Prot
Match:
Q0DXS3 (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2)
HSP 1 Score: 923.3 bits (2385), Expect = 2.6e-267
Identity = 456/740 (61.62%), Postives = 570/740 (77.03%), Query Frame = 0
Query: 371 SKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEDLDKLHSIDLAPRSSSAGNSERTRV 430
S VYF GPE N+SNRVVR F DI+NFLR+SFVDED +KL + DL+PRS+S ++ RT +
Sbjct: 7 STVYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDANRTAL 66
Query: 431 YDRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSAADIREWMGDFREIRN 490
Y R+LSVL +GI IG K FEFLAFS+SQLR+NS WMFASR+GL+A+DIR WMGDFR IRN
Sbjct: 67 YKRVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRN 126
Query: 491 VAKYAARLGQSFGSSRKTLCVEEHEFEVIPDVEVERKKTKYCFSDGIGKISKTLAEKVAE 550
VAKYAARLGQSF SS +TL V+++E E I D+ + T++ FSDGIGKIS A +VA
Sbjct: 127 VAKYAARLGQSFSSSTETLKVQKYEVEEISDI---KNGTQHVFSDGIGKISSAFANEVAM 186
Query: 551 KCGLISHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYMSLDTQLDVLLWSKYQPC 610
KC L PSAFQIRY GYKGVVA+DPT + KLSLRKSMLK+ S + +DVL +SKYQP
Sbjct: 187 KCNLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPG 246
Query: 611 FLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSKALEVLELMSPGEMTGILKEL 670
FLNRQ+I LLSTLG++D VF +KQ+EA++QL+ ++ DP A+E +ELM GE+T +KEL
Sbjct: 247 FLNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKEL 306
Query: 671 LLF-YKPNEEPFLNMMLRTFRADKFLDLRTKSRIFVPKGRTMMGCLDETRTLEYGQVFVH 730
LL Y+P++EP+L+M+L+TFRA K L+L+TKSRI +PKGR MMGCLDETRTL+YGQVF+
Sbjct: 307 LLCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIR 366
Query: 731 CSIPGRSNESNFVIKGKVVVAKNPCLHPGDVRVLDAVDVKALHHMVDCVVFPQKGKRPHP 790
+ G ++ F + GKVV+AKNPCLHPGD+R+L AVDV LHHM +CVVFPQ+G RPHP
Sbjct: 367 AT-SGVNDNDRFTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHHMFNCVVFPQQGPRPHP 426
Query: 791 NECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTMQLDHDVTIEEVQEYLANYMVND 850
NECSGSDLDGD+YFV WDP L + V PM Y PAPT LDHDVTIEEV+EY NY+VN+
Sbjct: 427 NECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEVEEYFTNYIVNE 486
Query: 851 GLGAIANAHTVFADKNPKKAMSTECIKLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFM 910
LG IANAH VFADK KA S+ CI+LAKLFSIAVDFPKTGVPA +P L V EYPDFM
Sbjct: 487 SLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPELHVKEYPDFM 546
Query: 911 DKPNKPTYASNGVLGKLFQGVKDVSSDVNTLEIFTREVAINCYDPDMEVDGFDKYLSEAF 970
+K +K TY S GV+GKL++ +K + + + FTREVA YD DM VDG++ Y++EA
Sbjct: 547 EKLDKVTYESKGVIGKLYREIKKHTPHI---KHFTREVARRSYDTDMIVDGYEDYITEAM 606
Query: 971 DYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRNDLEQITFAMKSLRKEARAW 1030
K YDFKLGNLMD+YGIK+E E++SG IL+MAK+F K++D + I A++SLRKEAR+
Sbjct: 607 ALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLAVRSLRKEARSR 666
Query: 1031 FNEKGSKSTYDNSKGEEEEYAKASAWYHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLI 1090
F+E S DN G + AKASAWYHVTYHP++WG YNEG +R HF+SFPWC+ +KL+
Sbjct: 667 FSE---MSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEGYERPHFISFPWCIYEKLL 726
Query: 1091 QIKREKTLLMSSSPMSSLIH 1110
+IK+ + + P +H
Sbjct: 727 RIKQRRKFVRKMQPELFSLH 736
BLAST of Bhi12G000832 vs. ExPASy Swiss-Prot
Match:
O82504 (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1)
HSP 1 Score: 740.0 bits (1909), Expect = 4.1e-212
Identity = 441/1152 (38.28%), Postives = 652/1152 (56.60%), Query Frame = 0
Query: 4 TIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRIS------KPKD-EKTRFTFVTVRFKS 63
T++I + DE+ FLE H G+ TV + I KP+D + +FT + V+ ++
Sbjct: 11 TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRA 70
Query: 64 ELAAEYIVEKATAAEKKLWFGSSYLKAREVERASPARGGGEMERMEDVKGHLGSLISKDK 123
+L +++ KL F + L+ E R +R++D+ +G S +K
Sbjct: 71 QL---------LSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEK 130
Query: 124 MRVI---WEGEN-WNVEFGIGVRKLSFYLSYEVE-YKMELAFENILGVEFRCPLNQPSKF 183
W+G W + R++ F++ + YK+E+ FE+I+ C S+
Sbjct: 131 RFCALEKWDGVRCWIL---TEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEI 190
Query: 184 --FLIQLQGAPRIFKKSRSSSSSRLNSN-------EFCFRWIRDVDFTPSSCIGQSFALC 243
FL++L+ P++FK+ +++ S+ +F F WIR DF+ S IG S C
Sbjct: 191 DAFLLKLKYGPKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFC 250
Query: 244 LELSPGHHLPPFFQNLVGYKETYAPFILQTGSSFSSISNLVPIITPP-RGFDISYKTLFK 303
LE+ G + F L Y+E G +F+S + +VP++ G + Y+ LF+
Sbjct: 251 LEVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQ 310
Query: 304 INALVQHGYLP-GPTLDDEFFRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKHHYL 363
+NALV + D E +++ V L+K+ CY+P ++K
Sbjct: 311 LNALVHAQKISLFAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVKTQMQ 370
Query: 364 SFYTSNQLPWKPNIS----LDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDN 423
S ++ P + + ++ R +TPSK+Y GPE +N VV+ F + + +
Sbjct: 371 S--VVKKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSD 430
Query: 424 FLRVSFVDEDLDKLHSIDLAPRSSSA--GNSERTRVYDRILSVLRNGIVIGDKKFEFLAF 483
F+RV+FV+ED KL + L+ S RT +Y+R+LS+L GI +G K+FEFLAF
Sbjct: 431 FMRVTFVEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAF 490
Query: 484 SASQLRENSFWMFASREGLSAADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEH 543
SASQLR NS WMFAS E + A DIREWMG FR+IR+++K AAR+GQ F +SR+TL V
Sbjct: 491 SASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQ 550
Query: 544 EFEVIPDVEVERKKTKYCFSDGIGKISKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVA 603
+ E IPD+EV YCFSDGIGKIS A++VA+KCGL SH PSAFQIRY GYKGV+A
Sbjct: 551 DVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIA 610
Query: 604 IDPTLKKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQ 663
+D + +KLSLR SMLK+ S + L+V W++ PCFLNR++I LLSTLGI+D +F Q
Sbjct: 611 VDRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQ 670
Query: 664 KEAIDQLDSILEDPSKALEVLELMSPGEMTGIL-KELLLFYKPNEEPFLNMMLRTFRADK 723
+ L ++LED AL VL+ +S +L K LL Y P+ EP+L+MMLR +
Sbjct: 671 AVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQ 730
Query: 724 FLDLRTKSRIFVPKGRTMMGCLDETRTLEYGQVFVHCSIP------------GRSNESNF 783
+L+++ RI VPKGR ++GC+DE LEYGQV+V ++ + +E
Sbjct: 731 LSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETS 790
Query: 784 VIKGKVVVAKNPCLHPGDVRVLDAVDVKALHH--MVDCVVFPQKGKRPHPNECSGSDLDG 843
V+ GKVVV KNPCLHPGD+RVLDA+ +DC++FPQKG+RPHPNECSG DLDG
Sbjct: 791 VVIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDG 850
Query: 844 DLYFVCWDPELTCIKPVKPMSYEPAPTMQLDHDVTIEEVQEYLANYMVNDGLGAIANAHT 903
D +FV WD ++ + PM Y + +DHDVT+EE+ ++ +YM++D LG I+ AH
Sbjct: 851 DQFFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHL 910
Query: 904 VFADKNPKKAMSTECIKLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYAS 963
V AD++P+KA S +C++LA L S AVDF KTG PA +P L+ E+PDF+++ KPTY S
Sbjct: 911 VHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYIS 970
Query: 964 NGVLGKLFQGVKDVSSDVNTLEIFTREVAINCYDPDMEVDGFDKYLSEAFDYKTRYDFKL 1023
V GKL++ VK + VA YD +E GF+ ++ A ++ Y KL
Sbjct: 971 ESVFGKLYRAVKSSLAQRKPEAESEDTVA---YDVTLEEAGFESFIETAKAHRDMYGEKL 1030
Query: 1024 GNLMDYYGIKTEPELVSGNI----LRMAKSFDKRNDL-EQITFAMKSLRKEARAWFNEKG 1083
+LM YYG E E+++G + + +A+ + D+ ++IT ++K L KEA WF +
Sbjct: 1031 TSLMIYYGAANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEK-- 1090
Query: 1084 SKSTYDNSKGEEEEYAKASAWYHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKRE 1107
+ + E+++ ASAWY+VTY+P N ++ FLSFPW V D L+ IK E
Sbjct: 1091 ------SCEDEQQKKKLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAE 1128
BLAST of Bhi12G000832 vs. ExPASy Swiss-Prot
Match:
Q7XM31 (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1)
HSP 1 Score: 730.7 bits (1885), Expect = 2.5e-209
Identity = 422/1013 (41.66%), Postives = 598/1013 (59.03%), Query Frame = 0
Query: 121 WEGENWNVEFGIGVRKLSFYLSYEVE-YKMELAFENILGVEFRCPLNQPSKFFLIQLQGA 180
W+G E G R++ YL ++ + YK+E+ FE++ C L+ L+QL A
Sbjct: 130 WDGV--RAEVIPGKRRVDLYLEHDSQRYKLEVLFEDMKDC-LGCTLDGMGA-ILLQLNYA 189
Query: 181 PRIFKK-SRSSSSSRLNSNEF--C-----FRWIRDVDFTPSSCIGQSFALCLELSPGHHL 240
PRI S + +SR + F C F W+R +DFTP+ G+ L L+L +
Sbjct: 190 PRIHTAISGPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSFGRCSTLVLKLGKSALV 249
Query: 241 PPFFQNLVGYKETYAPFILQTGSSFSSISNLVPIITPPRGFDISYKTLFKINALVQHGYL 300
++L + + + + SN+VP++ PR + + Y+ LF++N+L+ G +
Sbjct: 250 SDILKSL-PFSGNLGELTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKI 309
Query: 301 PGPTLDDEFFRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKHHYLSFYTSNQLPWK 360
++ + F+ + D EKM L+ CY P ++++ S S+ +
Sbjct: 310 VAKHVNADLFKAL--QELPVDVSRRIFEKMHKLESTCYGPLQFIQQEAYSMKRSHNV-LL 369
Query: 361 PNISLDDG---LVYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEDLD 420
N +G L+ +RV ITPSK++ GPE ++N VV+ +F+RV+FVDED
Sbjct: 370 SNEGEGEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWS 429
Query: 421 KLHSIDLAPRSSSAGNSE--RTRVYDRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWM 480
KL S ++ R S+ +T +Y RILS+L+ G IG K FEFLAFSASQLR NS WM
Sbjct: 430 KLSSNAISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWM 489
Query: 481 FASREGLSAADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEHEFEVIPDVEVER 540
FAS L+A IR WMG F IR+V+K AAR+GQ F SSR+T V + EVIPD+E+
Sbjct: 490 FASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEVIPDIEITT 549
Query: 541 KKTKYCFSDGIGKISKTLAEKVAEKCGL-ISHTPSAFQIRYAGYKGVVAIDPTLKKKLSL 600
+KY FSDGIGKIS A++VA GL ++ PSAFQIRY GYKGV+AIDP LSL
Sbjct: 550 DGSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSSIDLSL 609
Query: 601 RKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSIL 660
R SM K+ S L++ WSK QPC++NR++I+LLSTLGI+D +FV Q++ + + + +L
Sbjct: 610 RPSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEML 669
Query: 661 EDPSKALEVLELMSPGEMTGILKELLLFYKPNEEPFLNMMLRTFRADKFLDLRTKSRIFV 720
+ AL VL + E +K LL Y+P+ EP+L+M+L+ + ++ D+RT+ +I V
Sbjct: 670 TNKEVALSVLGKLGGSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIHV 729
Query: 721 PKGRTMMGCLDETRTLEYGQVFVHCSIPGR----SNESNF--------VIKGKVVVAKNP 780
PKGR ++GCLDET LEYGQV++ + + SN+S F + GKV + KNP
Sbjct: 730 PKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVVGKVAITKNP 789
Query: 781 CLHPGDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCI 840
CLHPGD+RVL+A+ L MVDC+VFPQ+G+RPHPNECSG DLDGDLYF+ WD +L
Sbjct: 790 CLHPGDIRVLEAIYDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIPE 849
Query: 841 KPVKPMSYEPAPTMQLDHDVTIEEVQEYLANYMVNDGLGAIANAHTVFADKNPKKAMSTE 900
K PM Y +DH VT+EE+Q++ +YM+ND LGAI+ AH + AD++P KA S E
Sbjct: 850 KVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPE 909
Query: 901 CIKLAKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQ---GV 960
C++LA L S+AVDF KTG PA +PR LR EYPDFM++ KP Y SNGVLGKL++ G
Sbjct: 910 CLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSAMGH 969
Query: 961 KDVSSDVNTLEIFTREVAINCYDPDMEVDGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKT 1020
+ S D L + + + YDPD+EV G D++L A +Y Y+ KL LM+YY +
Sbjct: 970 MEKSGDSGALSSSSAQPS-PTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAEL 1029
Query: 1021 EPELVSGNILRMAKSFDKRND------LEQITFAMKSLRKEARAWFNEKGSKSTYDNSKG 1080
E E+++GNI R + KR++ ++I A+ +L +EAR W +S+
Sbjct: 1030 EDEILTGNI-RNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLL---------SSRK 1089
Query: 1081 EEEEYAKASAWYHVTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKREKTL 1098
EE+ ASAWY VTYHPD + F SFPW D L+ IK L
Sbjct: 1090 EEDASRMASAWYRVTYHPD-------RRRGKRFWSFPWIACDNLLAIKASSQL 1116
BLAST of Bhi12G000832 vs. ExPASy Swiss-Prot
Match:
Q9SG02 (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1)
HSP 1 Score: 577.4 bits (1487), Expect = 3.5e-163
Identity = 391/1069 (36.58%), Postives = 571/1069 (53.41%), Query Frame = 0
Query: 108 LGSLISKDKMRVIW--EGENWNVEFGIGVRKLSFYLS-------------YEVEYKMELA 167
+G+L+S+D V W EG ++ V+ K F S +YK+EL
Sbjct: 139 IGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLELL 198
Query: 168 FENILGVEFRCPLNQPSKFFLIQLQGAPRIFKKSRSSS------SSRLNSNEFCFRWIRD 227
+I V L+ ++QL +PR++ ++ L+ ++ WIR
Sbjct: 199 VRDIQTVRQYKTLH--GFVLILQLASSPRVWYRTADDDIYDTVPGDLLDDDD---PWIRT 258
Query: 228 VDFTPSSCIGQSFALCLELSPGHH------LPPFFQNLVGYKETYAPFILQTGSSFSS-I 287
DFT IG+ + + +SP + L F V + P ++ F +
Sbjct: 259 TDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVRWPPRIRNEPCFGEPV 318
Query: 288 SNLVPIITPPRGFDISYKTLFKINALVQHGYLPGPTLDDEFFRLVDSSRFRPDYVEHA-L 347
S+ I G IS++ +F +N+++ G L + FF L+ R +P V A L
Sbjct: 319 SDHFFCIHHKEG--ISFEIMFLVNSVLHRGVFNQFQLTERFFDLL---RNQPKDVNIASL 378
Query: 348 EKMFNLKECCYEPQKWLKHHYLSFYTSNQLPWKPNISLDDGLVYVHRVQITPSKVYFRGP 407
+ + K ++ K LK + +L S D + + R+ ITP++ Y P
Sbjct: 379 KHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSED--ISEIRRLVITPTRAYCLPP 438
Query: 408 EANLSNRVVRRFIDDIDNFLRVSFVDEDLDKLHS-------IDLAPRSSSAGNSERTRVY 467
E LSNRV+RR+ + FLRV+F+DE + ++S + +S+ S++T V+
Sbjct: 439 EVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVF 498
Query: 468 DRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSAADIREWMGDFREIRNV 527
R+ S+L +G + +K+ FLAFSA+QLR+ S W FA +DI+ WMG F++ +NV
Sbjct: 499 KRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKFKD-KNV 558
Query: 528 AKYAARLGQSFGSSRKTLCVEEHEFEV-IPDVEVERKKTKYCFSDGIGKISKTLAEKVAE 587
AK AAR+G F S+ T+ V HE + +PD+E + Y FSDGIG I+ LA++V E
Sbjct: 559 AKCAARMGLCFSSTYATVDVMPHEVDTEVPDIE----RNGYVFSDGIGTITPDLADEVME 618
Query: 588 KCGL-ISHTPSAFQIRYAGYKGVVAIDPTLKK--KLSLRKSMLKYMSLDTQLDVLLWSKY 647
K L + ++P A+QIRYAG+KGVVA P+ +L+LR SM K+ S T L++ W+++
Sbjct: 619 KLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSWTRF 678
Query: 648 QPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSKALEVLELMSPGEMTGIL 707
QP FLNRQ+I LLS LG+ D +F Q+ + +L+ IL+D A EVL +
Sbjct: 679 QPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGNTAA 738
Query: 708 KELLLFYKPNEEPFLNMMLRTFRADKFLDLRTKSRIFVPKGRTMMGCLDETRTLEYGQVF 767
L +KP EP L ML + R + LR KSRIFV GR +MGCLDE LE+GQ F
Sbjct: 739 IMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCF 798
Query: 768 VHCSIPGRSN-----ESNF--------VIKGKVVVAKNPCLHPGDVRVLDAVDVKALHHM 827
+ S P N S F V+KG V +AKNPCLHPGDVR+L+AVDV LHHM
Sbjct: 799 IQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQLHHM 858
Query: 828 VDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPEL--TCIKPVKPMSYEPAPTMQLDHD 887
DC++FPQKG RPH NE SGSDLDGDLYFV WD +L K M Y+ A L
Sbjct: 859 YDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRA 918
Query: 888 VTIEEVQEYLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKLAKLFSIAVDFPKTGV 947
V +++ ++ A + N+ LG I NAH V AD++ AM EC+ LA+L + AVDFPKTG
Sbjct: 919 VNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKTGK 978
Query: 948 PANLPRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDV-SSDVNTLEIFTREVAINC 1007
++P +L+ YPDFM K + TY SN +LG+L++ VK+V D + + +
Sbjct: 979 IVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEESTDPSAIP 1038
Query: 1008 YDPDMEVDGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRND 1067
YD +E+ GF+ + EA+ +K YD +L L+ Y ++ E E+V+G+I M K K+
Sbjct: 1039 YDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQG 1098
Query: 1068 --LEQITFAMKSLRKEARAWFNEKGSKSTYDNSKGEEEEY---AKASAWYHVTYHPDYWG 1108
E++ + SL+KE R F E + ++N EE+ KASAWYHVTYHP++
Sbjct: 1099 ELKERLKHSYNSLKKEFRKVFEE--TIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVK 1158
BLAST of Bhi12G000832 vs. NCBI nr
Match:
XP_038875555.1 (probable RNA-dependent RNA polymerase 1 [Benincasa hispida])
HSP 1 Score: 2274.6 bits (5893), Expect = 0.0e+00
Identity = 1117/1117 (100.00%), Postives = 1117/1117 (100.00%), Query Frame = 0
Query: 1 MGKTIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRISKPKDEKTRFTFVTVRFKSELAA 60
MGKTIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRISKPKDEKTRFTFVTVRFKSELAA
Sbjct: 1 MGKTIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRISKPKDEKTRFTFVTVRFKSELAA 60
Query: 61 EYIVEKATAAEKKLWFGSSYLKAREVERASPARGGGEMERMEDVKGHLGSLISKDKMRVI 120
EYIVEKATAAEKKLWFGSSYLKAREVERASPARGGGEMERMEDVKGHLGSLISKDKMRVI
Sbjct: 61 EYIVEKATAAEKKLWFGSSYLKAREVERASPARGGGEMERMEDVKGHLGSLISKDKMRVI 120
Query: 121 WEGENWNVEFGIGVRKLSFYLSYEVEYKMELAFENILGVEFRCPLNQPSKFFLIQLQGAP 180
WEGENWNVEFGIGVRKLSFYLSYEVEYKMELAFENILGVEFRCPLNQPSKFFLIQLQGAP
Sbjct: 121 WEGENWNVEFGIGVRKLSFYLSYEVEYKMELAFENILGVEFRCPLNQPSKFFLIQLQGAP 180
Query: 181 RIFKKSRSSSSSRLNSNEFCFRWIRDVDFTPSSCIGQSFALCLELSPGHHLPPFFQNLVG 240
RIFKKSRSSSSSRLNSNEFCFRWIRDVDFTPSSCIGQSFALCLELSPGHHLPPFFQNLVG
Sbjct: 181 RIFKKSRSSSSSRLNSNEFCFRWIRDVDFTPSSCIGQSFALCLELSPGHHLPPFFQNLVG 240
Query: 241 YKETYAPFILQTGSSFSSISNLVPIITPPRGFDISYKTLFKINALVQHGYLPGPTLDDEF 300
YKETYAPFILQTGSSFSSISNLVPIITPPRGFDISYKTLFKINALVQHGYLPGPTLDDEF
Sbjct: 241 YKETYAPFILQTGSSFSSISNLVPIITPPRGFDISYKTLFKINALVQHGYLPGPTLDDEF 300
Query: 301 FRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKHHYLSFYTSNQLPWKPNISLDDGL 360
FRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKHHYLSFYTSNQLPWKPNISLDDGL
Sbjct: 301 FRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKHHYLSFYTSNQLPWKPNISLDDGL 360
Query: 361 VYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEDLDKLHSIDLAPRSS 420
VYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEDLDKLHSIDLAPRSS
Sbjct: 361 VYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEDLDKLHSIDLAPRSS 420
Query: 421 SAGNSERTRVYDRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSAADIRE 480
SAGNSERTRVYDRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSAADIRE
Sbjct: 421 SAGNSERTRVYDRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSAADIRE 480
Query: 481 WMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEHEFEVIPDVEVERKKTKYCFSDGIGKI 540
WMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEHEFEVIPDVEVERKKTKYCFSDGIGKI
Sbjct: 481 WMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEHEFEVIPDVEVERKKTKYCFSDGIGKI 540
Query: 541 SKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYMSLDTQLD 600
SKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYMSLDTQLD
Sbjct: 541 SKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYMSLDTQLD 600
Query: 601 VLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSKALEVLELMSP 660
VLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSKALEVLELMSP
Sbjct: 601 VLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSKALEVLELMSP 660
Query: 661 GEMTGILKELLLFYKPNEEPFLNMMLRTFRADKFLDLRTKSRIFVPKGRTMMGCLDETRT 720
GEMTGILKELLLFYKPNEEPFLNMMLRTFRADKFLDLRTKSRIFVPKGRTMMGCLDETRT
Sbjct: 661 GEMTGILKELLLFYKPNEEPFLNMMLRTFRADKFLDLRTKSRIFVPKGRTMMGCLDETRT 720
Query: 721 LEYGQVFVHCSIPGRSNESNFVIKGKVVVAKNPCLHPGDVRVLDAVDVKALHHMVDCVVF 780
LEYGQVFVHCSIPGRSNESNFVIKGKVVVAKNPCLHPGDVRVLDAVDVKALHHMVDCVVF
Sbjct: 721 LEYGQVFVHCSIPGRSNESNFVIKGKVVVAKNPCLHPGDVRVLDAVDVKALHHMVDCVVF 780
Query: 781 PQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTMQLDHDVTIEEVQE 840
PQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTMQLDHDVTIEEVQE
Sbjct: 781 PQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTMQLDHDVTIEEVQE 840
Query: 841 YLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKLAKLFSIAVDFPKTGVPANLPRNL 900
YLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKLAKLFSIAVDFPKTGVPANLPRNL
Sbjct: 841 YLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKLAKLFSIAVDFPKTGVPANLPRNL 900
Query: 901 RVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSSDVNTLEIFTREVAINCYDPDMEVDG 960
RVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSSDVNTLEIFTREVAINCYDPDMEVDG
Sbjct: 901 RVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSSDVNTLEIFTREVAINCYDPDMEVDG 960
Query: 961 FDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRNDLEQITFAMK 1020
FDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRNDLEQITFAMK
Sbjct: 961 FDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRNDLEQITFAMK 1020
Query: 1021 SLRKEARAWFNEKGSKSTYDNSKGEEEEYAKASAWYHVTYHPDYWGRYNEGMQRDHFLSF 1080
SLRKEARAWFNEKGSKSTYDNSKGEEEEYAKASAWYHVTYHPDYWGRYNEGMQRDHFLSF
Sbjct: 1021 SLRKEARAWFNEKGSKSTYDNSKGEEEEYAKASAWYHVTYHPDYWGRYNEGMQRDHFLSF 1080
Query: 1081 PWCVADKLIQIKREKTLLMSSSPMSSLIHKFGSLSLY 1118
PWCVADKLIQIKREKTLLMSSSPMSSLIHKFGSLSLY
Sbjct: 1081 PWCVADKLIQIKREKTLLMSSSPMSSLIHKFGSLSLY 1117
BLAST of Bhi12G000832 vs. NCBI nr
Match:
ADN33705.1 (RNA-dependent RNA polymerase [Cucumis melo subsp. melo])
HSP 1 Score: 1957.6 bits (5070), Expect = 0.0e+00
Identity = 970/1140 (85.09%), Postives = 1028/1140 (90.18%), Query Frame = 0
Query: 1 MGKTIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRISKPKDEKTRFTFVTVRFKSELAA 60
M KTIEIYGF P+VTVDEVKEFLENHTGDGTV TVRISKPKD+KTRFT VTVRFKS+LAA
Sbjct: 1 MEKTIEIYGFGPKVTVDEVKEFLENHTGDGTVSTVRISKPKDDKTRFTSVTVRFKSKLAA 60
Query: 61 EYIVEKATAAEKKLWFGSSYLKAREVERASPARGGGEMERMEDVKGHLGSLISKDKMRVI 120
EYIV KAT EKKLWF SSYLKAREVE+ + + GG EMERMEDVKG LGS+ISKDKMRVI
Sbjct: 61 EYIVAKATTEEKKLWFESSYLKAREVEKKATS-GGPEMERMEDVKGQLGSMISKDKMRVI 120
Query: 121 WEGENWNVEFGIGVRKLSFYLSYEV-EYKMELAFENILGVEFRCPLNQPSKFFLIQLQG- 180
WEGE WNVEFG GVRKL FYLSYEV +YKMEL FENIL VEFRCPLNQPSKFFLIQ+
Sbjct: 121 WEGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQVSSF 180
Query: 181 --------------------APRIFKKSRSSSSSRLNSNEF-CFRWIRDVDFTPSSCIGQ 240
APRIF+K+ SSSSS L SNE FRWIRDVDFTPSSCIGQ
Sbjct: 181 FLSFFSFFLSFLSLLKLQCRAPRIFRKTPSSSSSPLYSNESNSFRWIRDVDFTPSSCIGQ 240
Query: 241 SFALCLELSPGHHLPPFFQNLVGYKETYAPFILQTGSSFSSISNLVPIITPPRGFDISYK 300
SF LCL+ SP HHLPPFFQ LVGYK TY PFIL+ GSSF S SNLVPIITPP+ FDISYK
Sbjct: 241 SFTLCLQFSPSHHLPPFFQTLVGYKVTYDPFILRKGSSFVSNSNLVPIITPPQAFDISYK 300
Query: 301 TLFKINALVQHGYLPGPTLDDEFFRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKH 360
LFKINAL+Q GYL GPTLDDEFFRLVDSSRF PDY+EHALEK+FNLKECCY+PQKWLK
Sbjct: 301 ILFKINALLQRGYLSGPTLDDEFFRLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKD 360
Query: 361 HYLSFYTSNQLPWKPNISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDNF 420
YLS+Y SNQLPWKPN+SLDDGLVYVHRVQITP KVYF GPEANLSNRVVRRFIDDIDNF
Sbjct: 361 QYLSYYVSNQLPWKPNVSLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIDDIDNF 420
Query: 421 LRVSFVDEDLDKLHSIDLAPRSSSAGNSERTRVYDRILSVLRNGIVIGDKKFEFLAFSAS 480
LRVSFVDE+LDKLHSIDLAPRSSS N+ RTRVYDR++SVL+NGIVIGDKKFEFLAFSAS
Sbjct: 421 LRVSFVDEELDKLHSIDLAPRSSSPENNTRTRVYDRVVSVLKNGIVIGDKKFEFLAFSAS 480
Query: 481 QLRENSFWMFASREGLSAADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEHEFE 540
QLRENSFWMFASR+GLSAADIREWMGDFR+IRNVAKYAARLGQSFGSSRKTLCV+EHE E
Sbjct: 481 QLRENSFWMFASRKGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVKEHEIE 540
Query: 541 VIPDVEVERKKTKYCFSDGIGKISKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDP 600
VIPDVEVERK YCFSDGIGKISKTLA+KVA+KCGL HTPSAFQIRYAGYKGVVAIDP
Sbjct: 541 VIPDVEVERKNIMYCFSDGIGKISKTLAKKVAKKCGLTGHTPSAFQIRYAGYKGVVAIDP 600
Query: 601 TLKKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEA 660
T +KKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGI D VFVKKQKEA
Sbjct: 601 TSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 660
Query: 661 IDQLDSILEDPSKALEVLELMSPGEMTGILKELLLFYKPNEEPFLNMMLRTFRADKFLDL 720
IDQLDSILEDPS+ALEVLELMSPGEMT ILKELL FY PNEEPFLNMML TFRA+K LDL
Sbjct: 661 IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLWTFRANKLLDL 720
Query: 721 RTKSRIFVPKGRTMMGCLDETRTLEYGQVFVHCSIPGRSNESNFVIKGKVVVAKNPCLHP 780
+TKSRIFVP+GRTMMGCLDETRTLEYGQVFVHCS+PGRS+E NFV+KGKVVVAKNPCLHP
Sbjct: 721 KTKSRIFVPRGRTMMGCLDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHP 780
Query: 781 GDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVK 840
GDVR+LDA+DVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWD ELTCIK VK
Sbjct: 781 GDVRLLDAIDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVK 840
Query: 841 PMSYEPAPTMQLDHDVTIEEVQEYLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKL 900
PMSYEPAP++QLDHDVTIEEVQ+Y ANYMVNDGLGAIANAHTVFADKN KKAMS ECIKL
Sbjct: 841 PMSYEPAPSIQLDHDVTIEEVQKYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECIKL 900
Query: 901 AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSSDV 960
AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKP+KPTY SNGVLGKLF+GVKDVSSDV
Sbjct: 901 AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDV 960
Query: 961 NTLEIFTREVAINCYDPDMEVDGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSG 1020
NT EIFT+EVA CYDPDMEVDGF+KYL EAFDYKT+YDFKLGNLMDYYGIKTEPELVSG
Sbjct: 961 NTFEIFTKEVATKCYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 1020
Query: 1021 NILRMAKSFDKRNDLEQITFAMKSLRKEARAWFNEKGSKSTYDNSKGEEEEYAKASAWYH 1080
NIL+MAKSFDKRNDLEQI FAMKSLRKE R+WFNE SK TY++ E++EYA+ASAWY
Sbjct: 1021 NILKMAKSFDKRNDLEQIAFAMKSLRKEVRSWFNENESKYTYEDI--EDDEYARASAWYC 1080
Query: 1081 VTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKREKTLLMSSSPMSSLIHKFGSLSLY 1118
VTYHPDYWGRYNEG QRDHFLSFPWCVADKLIQIKREK L +SSPMSSL + F +SLY
Sbjct: 1081 VTYHPDYWGRYNEGTQRDHFLSFPWCVADKLIQIKREKMSLRNSSPMSSLQYNFDGMSLY 1137
BLAST of Bhi12G000832 vs. NCBI nr
Match:
ALM88235.1 (RNA-dependent RNA polymerase 1c [Cucumis sativus])
HSP 1 Score: 1955.3 bits (5064), Expect = 0.0e+00
Identity = 964/1114 (86.54%), Postives = 1018/1114 (91.38%), Query Frame = 0
Query: 1 MGKTIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRISKPKDEKTRFTFVTVRFKSELAA 60
MGKTIEIYGFRP+VT DEVKEFLENHTGDGTV TVRISKPKDEK RFT VTV FKS+LAA
Sbjct: 1 MGKTIEIYGFRPQVTADEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVLFKSKLAA 60
Query: 61 EYIVEKATAAEKKLWFGSSYLKAREVER---ASPARGGGEMERMEDVKGHLGSLISKDKM 120
EYIV K+T E+KLWF SSYLKARE+E+ A+ +G EMERMEDVKGHLGS+IS KM
Sbjct: 61 EYIVAKSTTEERKLWFESSYLKARELEKAVVANETKGVLEMERMEDVKGHLGSMISNGKM 120
Query: 121 RVIWEGENWNVEFGIGVRKLSFYLSYEV-EYKMELAFENILGVEFRCPLNQPSKFFLIQL 180
RVIWEGE W+VEFG G RKL FYLSYEV EYKMEL FENIL VEFRCPLN+PSKFFLIQL
Sbjct: 121 RVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENILSVEFRCPLNEPSKFFLIQL 180
Query: 181 QGAPRIFKKSRSSSSSRLNSNE-FCFRWIRDVDFTPSSCIGQSFALCLELSPGHHLPPFF 240
QGAPRIF+K+ SSSSS L SN+ FRWIRDVDFTPSSCIGQSF +CL+LSP HHLPPFF
Sbjct: 181 QGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCIGQSFTICLQLSPSHHLPPFF 240
Query: 241 QNLVGYKETYAPFILQTGSSFSSISNLVPIITPPRGFDISYKTLFKINALVQHGYLPGPT 300
Q LVGYK TYAPFIL GSS S SNLVPIITPP+ FDISYK LFKINAL+QHGYL GPT
Sbjct: 241 QTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDISYKILFKINALLQHGYLSGPT 300
Query: 301 LDDEFFRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKHHYLSFYTSNQLPWKPNIS 360
LDDEFFRLVDSSRF DY+EHALEK+FNLKECCY+PQKWLK YLS+YTSNQLPWK NIS
Sbjct: 301 LDDEFFRLVDSSRFHSDYIEHALEKLFNLKECCYKPQKWLKDQYLSYYTSNQLPWKSNIS 360
Query: 361 LDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEDLDKLHSIDL 420
LDDGLVYVHRVQITP KVYF GPEANLSNRVVRRFI DIDNFLRVSFVDE+LDKLHSIDL
Sbjct: 361 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 420
Query: 421 APRSSSAGNSERTRVYDRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSA 480
APRSSS NS+RTRVYDR++S+L+NGIVIG+KKFEFLAFSASQLRENSFWMFASREGLSA
Sbjct: 421 APRSSSPENSQRTRVYDRVISILKNGIVIGNKKFEFLAFSASQLRENSFWMFASREGLSA 480
Query: 481 ADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEHEFEVIPDVEVERKKTKYCFSD 540
ADIREWMGDF IRNVAKYAARLGQSFGSSRKTLCVEEHE EVIPDVEVERK YCFSD
Sbjct: 481 ADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNIMYCFSD 540
Query: 541 GIGKISKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYMSL 600
GIGKISKTLA+KVAEKCGL SHTPSAFQIRYAGYKGVVAIDPT +KKLSLRKSMLKYMSL
Sbjct: 541 GIGKISKTLAKKVAEKCGLTSHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMSL 600
Query: 601 DTQLDVLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSKALEVL 660
DTQLDVLLWSKYQPCFLNRQVINLLSTLGI+D VFVKKQKEAIDQLDSILEDPS+ALEVL
Sbjct: 601 DTQLDVLLWSKYQPCFLNRQVINLLSTLGIRDDVFVKKQKEAIDQLDSILEDPSRALEVL 660
Query: 661 ELMSPGEMTGILKELLLFYKPNEEPFLNMMLRTFRADKFLDLRTKSRIFVPKGRTMMGCL 720
ELMSPGEMT ILKELL FY PN+EPFLNMMLRTFRADK LDLRTKSRIFVPKGRTMMGCL
Sbjct: 661 ELMSPGEMTSILKELLSFYMPNQEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGCL 720
Query: 721 DETRTLEYGQVFVHCSIPGRSNESNFVIKGKVVVAKNPCLHPGDVRVLDAVDVKALHHMV 780
DET+TLEYGQVFVHCSIPGRS+E NFV+KGKVVVAKNPCLHPGDVR+LDA+DVKALHHMV
Sbjct: 721 DETQTLEYGQVFVHCSIPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHMV 780
Query: 781 DCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTMQLDHDVTI 840
DCVVFPQKGKRPHPNECSGSDLDGDLYFVCWD ELTCIK VKPMSY+PAPT+QLDHDVTI
Sbjct: 781 DCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDTELTCIKQVKPMSYKPAPTIQLDHDVTI 840
Query: 841 EEVQEYLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKLAKLFSIAVDFPKTGVPAN 900
EEVQEY ANYMVNDGLGAIANAHTVFADKN KKAMS ECIKLAKLFSIAVDFPKTGVPAN
Sbjct: 841 EEVQEYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECIKLAKLFSIAVDFPKTGVPAN 900
Query: 901 LPRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSSDVNTLEIFTREVAINCYDPD 960
LPRNLRVHEYPDFMDKPNK TY SNGVLGKLF+GVKDVSSDV+ EIFTREVA CYDPD
Sbjct: 901 LPRNLRVHEYPDFMDKPNKATYVSNGVLGKLFRGVKDVSSDVSAFEIFTREVATKCYDPD 960
Query: 961 MEVDGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRNDLEQI 1020
MEVDGF+KYL EAFDYKT+YDFKLGNLMDYYGIKTEPELVSGNIL+MAKSFDKR DLEQI
Sbjct: 961 MEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRKDLEQI 1020
Query: 1021 TFAMKSLRKEARAWFNEKGSKSTYDNSKGEEEEYAKASAWYHVTYHPDYWGRYNEGMQRD 1080
FAMKSLRKE R WFNE SKSTYD+ ++EYA+ASAWY VTYHPDYWG YNEG +RD
Sbjct: 1021 AFAMKSLRKEVRFWFNENESKSTYDDI---QDEYARASAWYCVTYHPDYWGCYNEGTKRD 1080
Query: 1081 HFLSFPWCVADKLIQIKREKTLLMSSSPMSSLIH 1110
HFLSFPWCVADKLIQIKREK + +SSP SSL+H
Sbjct: 1081 HFLSFPWCVADKLIQIKREKMSMRNSSPKSSLLH 1111
BLAST of Bhi12G000832 vs. NCBI nr
Match:
XP_031740912.1 (probable RNA-dependent RNA polymerase 1 [Cucumis sativus] >KGN52010.2 hypothetical protein Csa_008596 [Cucumis sativus])
HSP 1 Score: 1955.3 bits (5064), Expect = 0.0e+00
Identity = 965/1114 (86.62%), Postives = 1018/1114 (91.38%), Query Frame = 0
Query: 1 MGKTIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRISKPKDEKTRFTFVTVRFKSELAA 60
MGKTIEIYGFRP+VT DEVKEFLENHTGDGTV TVRISKPKDEK RFT VTV FKS+LAA
Sbjct: 1 MGKTIEIYGFRPQVTADEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVLFKSKLAA 60
Query: 61 EYIVEKATAAEKKLWFGSSYLKAREVERASPA---RGGGEMERMEDVKGHLGSLISKDKM 120
EYIV K+T E+KLWF SSYLKARE+E+A A +G EMERMEDVKGHLGS+IS KM
Sbjct: 61 EYIVAKSTTEERKLWFESSYLKARELEKAVVAKETKGVLEMERMEDVKGHLGSMISNGKM 120
Query: 121 RVIWEGENWNVEFGIGVRKLSFYLSYEV-EYKMELAFENILGVEFRCPLNQPSKFFLIQL 180
RVIWEGE W+VEFG G RKL FYLSYEV EYKMEL FENIL VEFRCPLN+PSKFFLIQL
Sbjct: 121 RVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENILSVEFRCPLNEPSKFFLIQL 180
Query: 181 QGAPRIFKKSRSSSSSRLNSNE-FCFRWIRDVDFTPSSCIGQSFALCLELSPGHHLPPFF 240
QGAPRIF+K+ SSSSS L SN+ FRWIRDVDFTPSSCIGQSF +CL+LSP HHLPPFF
Sbjct: 181 QGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCIGQSFTICLQLSPSHHLPPFF 240
Query: 241 QNLVGYKETYAPFILQTGSSFSSISNLVPIITPPRGFDISYKTLFKINALVQHGYLPGPT 300
Q LVGYK TYAPFIL GSS S SNLVPIITPP+ FDISYK LFKINAL+QHGYL GPT
Sbjct: 241 QTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDISYKILFKINALLQHGYLSGPT 300
Query: 301 LDDEFFRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKHHYLSFYTSNQLPWKPNIS 360
LDDEFFRLVDSSRF DY+EHALEK+FNLKECCY+PQKWLK YLS+YTSNQLPWK NIS
Sbjct: 301 LDDEFFRLVDSSRFHSDYIEHALEKLFNLKECCYKPQKWLKDQYLSYYTSNQLPWKSNIS 360
Query: 361 LDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEDLDKLHSIDL 420
LDDGLVYVHRVQITP KVYF GPEANLSNRVVRRFI DIDNFLRVSFVDE+LDKLHSIDL
Sbjct: 361 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 420
Query: 421 APRSSSAGNSERTRVYDRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSA 480
APRSSS NS+RTRVYDR++S+L+NGIVIG+KKFEFLAFSASQLRENSFWMFASREGLSA
Sbjct: 421 APRSSSPENSQRTRVYDRVISILKNGIVIGNKKFEFLAFSASQLRENSFWMFASREGLSA 480
Query: 481 ADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEHEFEVIPDVEVERKKTKYCFSD 540
ADIREWMGDF IRNVAKYAARLGQSFGSSRKTLCVEEHE EVIPDVEVERK YCFSD
Sbjct: 481 ADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNIMYCFSD 540
Query: 541 GIGKISKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYMSL 600
GIGKISKTLA+KVAEKCGL SHTPSAFQIRYAGYKGVVAIDPT +KKLSLRKSMLKYMSL
Sbjct: 541 GIGKISKTLAKKVAEKCGLTSHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMSL 600
Query: 601 DTQLDVLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSKALEVL 660
DTQLDVLLWSKYQPCFLNRQVINLLSTLGI+D VFVKKQKEAIDQLDSILEDPS+ALEVL
Sbjct: 601 DTQLDVLLWSKYQPCFLNRQVINLLSTLGIRDDVFVKKQKEAIDQLDSILEDPSRALEVL 660
Query: 661 ELMSPGEMTGILKELLLFYKPNEEPFLNMMLRTFRADKFLDLRTKSRIFVPKGRTMMGCL 720
ELMSPGEMT ILKELL FY PN+EPFLNMMLRTFRADK LDLRTKSRIFVPKGRTMMGCL
Sbjct: 661 ELMSPGEMTSILKELLSFYMPNQEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGCL 720
Query: 721 DETRTLEYGQVFVHCSIPGRSNESNFVIKGKVVVAKNPCLHPGDVRVLDAVDVKALHHMV 780
DET+TLEYGQVFVHCSIPGRS+E NFV+KGKVVVAKNPCLHPGDVR+LDA+DVKALHHMV
Sbjct: 721 DETQTLEYGQVFVHCSIPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHMV 780
Query: 781 DCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTMQLDHDVTI 840
DCVVFPQKGKRPHPNECSGSDLDGDLYFVCWD ELTCIK VKPMSY+PAPT+QLDHDVTI
Sbjct: 781 DCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDTELTCIKQVKPMSYKPAPTIQLDHDVTI 840
Query: 841 EEVQEYLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKLAKLFSIAVDFPKTGVPAN 900
EEVQEY ANYMVNDGLGAIANAHTVFADKN KKAMS ECIKLAKLFSIAVDFPKTGVPAN
Sbjct: 841 EEVQEYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECIKLAKLFSIAVDFPKTGVPAN 900
Query: 901 LPRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSSDVNTLEIFTREVAINCYDPD 960
LPRNLRVHEYPDFMDKPNK TY SNGVLGKLF+GVKDVSSDV+ EIFTREVA CYDPD
Sbjct: 901 LPRNLRVHEYPDFMDKPNKATYVSNGVLGKLFRGVKDVSSDVSAFEIFTREVATKCYDPD 960
Query: 961 MEVDGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRNDLEQI 1020
MEVDGF+KYL EAFDYKT+YDFKLGNLMDYYGIKTEPELVSGNIL+MAKSFDKR DLEQI
Sbjct: 961 MEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRKDLEQI 1020
Query: 1021 TFAMKSLRKEARAWFNEKGSKSTYDNSKGEEEEYAKASAWYHVTYHPDYWGRYNEGMQRD 1080
FAMKSLRKE R WFNE SKSTYD+ ++EYA+ASAWY VTYHPDYWG YNEG +RD
Sbjct: 1021 AFAMKSLRKEVRFWFNENESKSTYDDI---QDEYARASAWYCVTYHPDYWGCYNEGTKRD 1080
Query: 1081 HFLSFPWCVADKLIQIKREKTLLMSSSPMSSLIH 1110
HFLSFPWCVADKLIQIKREK + +SSP SSL+H
Sbjct: 1081 HFLSFPWCVADKLIQIKREKMSMRNSSPKSSLLH 1111
BLAST of Bhi12G000832 vs. NCBI nr
Match:
XP_031741021.1 (probable RNA-dependent RNA polymerase 1 [Cucumis sativus])
HSP 1 Score: 1952.2 bits (5056), Expect = 0.0e+00
Identity = 962/1116 (86.20%), Postives = 1019/1116 (91.31%), Query Frame = 0
Query: 1 MGKTIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRISKPKDEKTRFTFVTVRFKSELAA 60
MGKTIEIYGFRP+VT DEVKEFLENHTGDGTV TVRISKPKDEK RFT VTV FKS+LAA
Sbjct: 1 MGKTIEIYGFRPQVTADEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVLFKSKLAA 60
Query: 61 EYIVEKATAAEKKLWFGSSYLKAREVER---ASPARGGGEMERMEDVKGHLGSLISKDKM 120
EYIV K+T E+KLWF SSYLKARE+E+ A+ +G EMERMEDVKGHLGS+IS KM
Sbjct: 61 EYIVAKSTTEERKLWFESSYLKARELEKAVVANETKGVLEMERMEDVKGHLGSMISNGKM 120
Query: 121 RVIWEGENWNVEFGIGVRKLSFYLSYEV-EYKMELAFENILGVEFRCPLNQPSKFFLIQL 180
RVIWEGE W+VEFG G RKL FYLSYEV EYKMEL FENIL VEFRCPLN+PSKFFLIQL
Sbjct: 121 RVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENILSVEFRCPLNEPSKFFLIQL 180
Query: 181 QGAPRIFKKSRSSSSSRLNSNE-FCFRWIRDVDFTPSSCIGQSFALCLELSPGHHLPPFF 240
QGAPRIF+K+ SSSSS L SN+ FRWIRDVDFTPSSCIGQSF +CL+LSP HHLPPFF
Sbjct: 181 QGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCIGQSFTICLQLSPSHHLPPFF 240
Query: 241 QNLVGYKETYAPFILQTGSSFSSISNLVPIITPPRGFDISYKTLFKINALVQHGYLPGPT 300
Q LVGYK TYAPFIL GSS S SNLVPIITPP+ FDISYK LFKINAL+QHGYL GPT
Sbjct: 241 QTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDISYKILFKINALLQHGYLSGPT 300
Query: 301 LDDEFFRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKHHYLSFYTSNQLPWKPNIS 360
LDDEFFRLVDSSRF DY++HALEK+FNLKECCY+PQKWLK YLS+YTSNQLPWK NIS
Sbjct: 301 LDDEFFRLVDSSRFHSDYIDHALEKLFNLKECCYKPQKWLKDQYLSYYTSNQLPWKSNIS 360
Query: 361 LDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEDLDKLHSIDL 420
LDDGLVYVHRVQITP KVYF GPEANLSNRVVRRFI DIDNFLRVSFVDE+LDKLHSIDL
Sbjct: 361 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 420
Query: 421 APRSSSAGNSERTRVYDRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSA 480
APRSSS NS+RTRVYDR++SVL+NGIVIG+KKFEFLAFSASQLRENSFWMFASREGLSA
Sbjct: 421 APRSSSHENSQRTRVYDRVVSVLKNGIVIGNKKFEFLAFSASQLRENSFWMFASREGLSA 480
Query: 481 ADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEHEFEVIPDVEVERKKTKYCFSD 540
ADIREWMGDF IRNVAKYAARLGQSFGSSRKTLCVEEHE EVIPDVEVERK YCFSD
Sbjct: 481 ADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNIIYCFSD 540
Query: 541 GIGKISKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYMSL 600
GIGKISKTLA+KVAEKCGLI+HTPSAFQIRYAGYKGVVAIDPT KKKLSLR SMLKYMSL
Sbjct: 541 GIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDPTSKKKLSLRNSMLKYMSL 600
Query: 601 DTQLDVLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSKALEVL 660
DTQLDVL WSKYQPCFLNRQVINLLSTLGI D VFVKKQKEAIDQLDSILEDPS+ALEVL
Sbjct: 601 DTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEAIDQLDSILEDPSRALEVL 660
Query: 661 ELMSPGEMTGILKELLLFYKPNEEPFLNMMLRTFRADKFLDLRTKSRIFVPKGRTMMGCL 720
ELMSPGEMT ILKELL FY PNEEPFLNMMLRTFRA+K LDL+TKSRIFVP+GRTM+GCL
Sbjct: 661 ELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPEGRTMIGCL 720
Query: 721 DETRTLEYGQVFVHCSIPGRSNESNFVIKGKVVVAKNPCLHPGDVRVLDAVDVKALHHMV 780
DETRTLEYGQVFVHCS+P RS+E NFV+KGK+VVAKNPCLHPGDVRVLDAVDVKALHHMV
Sbjct: 721 DETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHPGDVRVLDAVDVKALHHMV 780
Query: 781 DCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTMQLDHDVTI 840
DCVVFPQKGKRPHPNECSGSDLDGDLYF CWD ELTCIK VKPM+YEPAPT+QL+HDVTI
Sbjct: 781 DCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVKPMNYEPAPTIQLNHDVTI 840
Query: 841 EEVQEYLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKLAKLFSIAVDFPKTGVPAN 900
EE+QEY ANYMVNDG+GAIANAHTVFADKN KKAMS ECIKLAKLFSIAVDFPKTGVPAN
Sbjct: 841 EEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKLAKLFSIAVDFPKTGVPAN 900
Query: 901 LPRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSSDVNTLEIFTREVAINCYDPD 960
LPRNLRVHEYPDFMDKPNKPTY SNGVLGKLF+GVKDVSSDVNT EIFTREVA YDPD
Sbjct: 901 LPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDVNTFEIFTREVATKYYDPD 960
Query: 961 MEVDGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRNDLEQI 1020
MEVDGF+KYL EAFDYKT+YDFKLGNLMDYYGIKTEPELVSGN+L+MAKSFDKRNDLEQI
Sbjct: 961 MEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNVLKMAKSFDKRNDLEQI 1020
Query: 1021 TFAMKSLRKEARAWFNEKGSKSTYDNSKGEEEEYAKASAWYHVTYHPDYWGRYNEGMQRD 1080
TFAMKSLRKE R+WFNE SK TYD+ E+EYAKASAWY+VTYHPDYWG YNEGMQRD
Sbjct: 1021 TFAMKSLRKEVRSWFNENESKFTYDDI---EDEYAKASAWYYVTYHPDYWGCYNEGMQRD 1080
Query: 1081 HFLSFPWCVADKLIQIKREKTLLMSSSPMSSLIHKF 1112
HFLSFPWCVADKLIQIKR+K L +S P+SSL H F
Sbjct: 1081 HFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNF 1113
BLAST of Bhi12G000832 vs. ExPASy TrEMBL
Match:
E5GB63 (RNA-dependent RNA polymerase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)
HSP 1 Score: 1957.6 bits (5070), Expect = 0.0e+00
Identity = 970/1140 (85.09%), Postives = 1028/1140 (90.18%), Query Frame = 0
Query: 1 MGKTIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRISKPKDEKTRFTFVTVRFKSELAA 60
M KTIEIYGF P+VTVDEVKEFLENHTGDGTV TVRISKPKD+KTRFT VTVRFKS+LAA
Sbjct: 1 MEKTIEIYGFGPKVTVDEVKEFLENHTGDGTVSTVRISKPKDDKTRFTSVTVRFKSKLAA 60
Query: 61 EYIVEKATAAEKKLWFGSSYLKAREVERASPARGGGEMERMEDVKGHLGSLISKDKMRVI 120
EYIV KAT EKKLWF SSYLKAREVE+ + + GG EMERMEDVKG LGS+ISKDKMRVI
Sbjct: 61 EYIVAKATTEEKKLWFESSYLKAREVEKKATS-GGPEMERMEDVKGQLGSMISKDKMRVI 120
Query: 121 WEGENWNVEFGIGVRKLSFYLSYEV-EYKMELAFENILGVEFRCPLNQPSKFFLIQLQG- 180
WEGE WNVEFG GVRKL FYLSYEV +YKMEL FENIL VEFRCPLNQPSKFFLIQ+
Sbjct: 121 WEGEKWNVEFGNGVRKLWFYLSYEVDDYKMELCFENILSVEFRCPLNQPSKFFLIQVSSF 180
Query: 181 --------------------APRIFKKSRSSSSSRLNSNEF-CFRWIRDVDFTPSSCIGQ 240
APRIF+K+ SSSSS L SNE FRWIRDVDFTPSSCIGQ
Sbjct: 181 FLSFFSFFLSFLSLLKLQCRAPRIFRKTPSSSSSPLYSNESNSFRWIRDVDFTPSSCIGQ 240
Query: 241 SFALCLELSPGHHLPPFFQNLVGYKETYAPFILQTGSSFSSISNLVPIITPPRGFDISYK 300
SF LCL+ SP HHLPPFFQ LVGYK TY PFIL+ GSSF S SNLVPIITPP+ FDISYK
Sbjct: 241 SFTLCLQFSPSHHLPPFFQTLVGYKVTYDPFILRKGSSFVSNSNLVPIITPPQAFDISYK 300
Query: 301 TLFKINALVQHGYLPGPTLDDEFFRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKH 360
LFKINAL+Q GYL GPTLDDEFFRLVDSSRF PDY+EHALEK+FNLKECCY+PQKWLK
Sbjct: 301 ILFKINALLQRGYLSGPTLDDEFFRLVDSSRFHPDYIEHALEKLFNLKECCYKPQKWLKD 360
Query: 361 HYLSFYTSNQLPWKPNISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDNF 420
YLS+Y SNQLPWKPN+SLDDGLVYVHRVQITP KVYF GPEANLSNRVVRRFIDDIDNF
Sbjct: 361 QYLSYYVSNQLPWKPNVSLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIDDIDNF 420
Query: 421 LRVSFVDEDLDKLHSIDLAPRSSSAGNSERTRVYDRILSVLRNGIVIGDKKFEFLAFSAS 480
LRVSFVDE+LDKLHSIDLAPRSSS N+ RTRVYDR++SVL+NGIVIGDKKFEFLAFSAS
Sbjct: 421 LRVSFVDEELDKLHSIDLAPRSSSPENNTRTRVYDRVVSVLKNGIVIGDKKFEFLAFSAS 480
Query: 481 QLRENSFWMFASREGLSAADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEHEFE 540
QLRENSFWMFASR+GLSAADIREWMGDFR+IRNVAKYAARLGQSFGSSRKTLCV+EHE E
Sbjct: 481 QLRENSFWMFASRKGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVKEHEIE 540
Query: 541 VIPDVEVERKKTKYCFSDGIGKISKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDP 600
VIPDVEVERK YCFSDGIGKISKTLA+KVA+KCGL HTPSAFQIRYAGYKGVVAIDP
Sbjct: 541 VIPDVEVERKNIMYCFSDGIGKISKTLAKKVAKKCGLTGHTPSAFQIRYAGYKGVVAIDP 600
Query: 601 TLKKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEA 660
T +KKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGI D VFVKKQKEA
Sbjct: 601 TSEKKLSLRKSMLKYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEA 660
Query: 661 IDQLDSILEDPSKALEVLELMSPGEMTGILKELLLFYKPNEEPFLNMMLRTFRADKFLDL 720
IDQLDSILEDPS+ALEVLELMSPGEMT ILKELL FY PNEEPFLNMML TFRA+K LDL
Sbjct: 661 IDQLDSILEDPSRALEVLELMSPGEMTSILKELLSFYMPNEEPFLNMMLWTFRANKLLDL 720
Query: 721 RTKSRIFVPKGRTMMGCLDETRTLEYGQVFVHCSIPGRSNESNFVIKGKVVVAKNPCLHP 780
+TKSRIFVP+GRTMMGCLDETRTLEYGQVFVHCS+PGRS+E NFV+KGKVVVAKNPCLHP
Sbjct: 721 KTKSRIFVPRGRTMMGCLDETRTLEYGQVFVHCSVPGRSSEGNFVVKGKVVVAKNPCLHP 780
Query: 781 GDVRVLDAVDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVK 840
GDVR+LDA+DVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWD ELTCIK VK
Sbjct: 781 GDVRLLDAIDVKALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDSELTCIKQVK 840
Query: 841 PMSYEPAPTMQLDHDVTIEEVQEYLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKL 900
PMSYEPAP++QLDHDVTIEEVQ+Y ANYMVNDGLGAIANAHTVFADKN KKAMS ECIKL
Sbjct: 841 PMSYEPAPSIQLDHDVTIEEVQKYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECIKL 900
Query: 901 AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSSDV 960
AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKP+KPTY SNGVLGKLF+GVKDVSSDV
Sbjct: 901 AKLFSIAVDFPKTGVPANLPRNLRVHEYPDFMDKPDKPTYVSNGVLGKLFRGVKDVSSDV 960
Query: 961 NTLEIFTREVAINCYDPDMEVDGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSG 1020
NT EIFT+EVA CYDPDMEVDGF+KYL EAFDYKT+YDFKLGNLMDYYGIKTEPELVSG
Sbjct: 961 NTFEIFTKEVATKCYDPDMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSG 1020
Query: 1021 NILRMAKSFDKRNDLEQITFAMKSLRKEARAWFNEKGSKSTYDNSKGEEEEYAKASAWYH 1080
NIL+MAKSFDKRNDLEQI FAMKSLRKE R+WFNE SK TY++ E++EYA+ASAWY
Sbjct: 1021 NILKMAKSFDKRNDLEQIAFAMKSLRKEVRSWFNENESKYTYEDI--EDDEYARASAWYC 1080
Query: 1081 VTYHPDYWGRYNEGMQRDHFLSFPWCVADKLIQIKREKTLLMSSSPMSSLIHKFGSLSLY 1118
VTYHPDYWGRYNEG QRDHFLSFPWCVADKLIQIKREK L +SSPMSSL + F +SLY
Sbjct: 1081 VTYHPDYWGRYNEGTQRDHFLSFPWCVADKLIQIKREKMSLRNSSPMSSLQYNFDGMSLY 1137
BLAST of Bhi12G000832 vs. ExPASy TrEMBL
Match:
A0A0S1YCZ4 (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=RDR1c PE=2 SV=1)
HSP 1 Score: 1955.3 bits (5064), Expect = 0.0e+00
Identity = 964/1114 (86.54%), Postives = 1018/1114 (91.38%), Query Frame = 0
Query: 1 MGKTIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRISKPKDEKTRFTFVTVRFKSELAA 60
MGKTIEIYGFRP+VT DEVKEFLENHTGDGTV TVRISKPKDEK RFT VTV FKS+LAA
Sbjct: 1 MGKTIEIYGFRPQVTADEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVLFKSKLAA 60
Query: 61 EYIVEKATAAEKKLWFGSSYLKAREVER---ASPARGGGEMERMEDVKGHLGSLISKDKM 120
EYIV K+T E+KLWF SSYLKARE+E+ A+ +G EMERMEDVKGHLGS+IS KM
Sbjct: 61 EYIVAKSTTEERKLWFESSYLKARELEKAVVANETKGVLEMERMEDVKGHLGSMISNGKM 120
Query: 121 RVIWEGENWNVEFGIGVRKLSFYLSYEV-EYKMELAFENILGVEFRCPLNQPSKFFLIQL 180
RVIWEGE W+VEFG G RKL FYLSYEV EYKMEL FENIL VEFRCPLN+PSKFFLIQL
Sbjct: 121 RVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENILSVEFRCPLNEPSKFFLIQL 180
Query: 181 QGAPRIFKKSRSSSSSRLNSNE-FCFRWIRDVDFTPSSCIGQSFALCLELSPGHHLPPFF 240
QGAPRIF+K+ SSSSS L SN+ FRWIRDVDFTPSSCIGQSF +CL+LSP HHLPPFF
Sbjct: 181 QGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCIGQSFTICLQLSPSHHLPPFF 240
Query: 241 QNLVGYKETYAPFILQTGSSFSSISNLVPIITPPRGFDISYKTLFKINALVQHGYLPGPT 300
Q LVGYK TYAPFIL GSS S SNLVPIITPP+ FDISYK LFKINAL+QHGYL GPT
Sbjct: 241 QTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDISYKILFKINALLQHGYLSGPT 300
Query: 301 LDDEFFRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKHHYLSFYTSNQLPWKPNIS 360
LDDEFFRLVDSSRF DY+EHALEK+FNLKECCY+PQKWLK YLS+YTSNQLPWK NIS
Sbjct: 301 LDDEFFRLVDSSRFHSDYIEHALEKLFNLKECCYKPQKWLKDQYLSYYTSNQLPWKSNIS 360
Query: 361 LDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEDLDKLHSIDL 420
LDDGLVYVHRVQITP KVYF GPEANLSNRVVRRFI DIDNFLRVSFVDE+LDKLHSIDL
Sbjct: 361 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 420
Query: 421 APRSSSAGNSERTRVYDRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSA 480
APRSSS NS+RTRVYDR++S+L+NGIVIG+KKFEFLAFSASQLRENSFWMFASREGLSA
Sbjct: 421 APRSSSPENSQRTRVYDRVISILKNGIVIGNKKFEFLAFSASQLRENSFWMFASREGLSA 480
Query: 481 ADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEHEFEVIPDVEVERKKTKYCFSD 540
ADIREWMGDF IRNVAKYAARLGQSFGSSRKTLCVEEHE EVIPDVEVERK YCFSD
Sbjct: 481 ADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNIMYCFSD 540
Query: 541 GIGKISKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYMSL 600
GIGKISKTLA+KVAEKCGL SHTPSAFQIRYAGYKGVVAIDPT +KKLSLRKSMLKYMSL
Sbjct: 541 GIGKISKTLAKKVAEKCGLTSHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMSL 600
Query: 601 DTQLDVLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSKALEVL 660
DTQLDVLLWSKYQPCFLNRQVINLLSTLGI+D VFVKKQKEAIDQLDSILEDPS+ALEVL
Sbjct: 601 DTQLDVLLWSKYQPCFLNRQVINLLSTLGIRDDVFVKKQKEAIDQLDSILEDPSRALEVL 660
Query: 661 ELMSPGEMTGILKELLLFYKPNEEPFLNMMLRTFRADKFLDLRTKSRIFVPKGRTMMGCL 720
ELMSPGEMT ILKELL FY PN+EPFLNMMLRTFRADK LDLRTKSRIFVPKGRTMMGCL
Sbjct: 661 ELMSPGEMTSILKELLSFYMPNQEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGCL 720
Query: 721 DETRTLEYGQVFVHCSIPGRSNESNFVIKGKVVVAKNPCLHPGDVRVLDAVDVKALHHMV 780
DET+TLEYGQVFVHCSIPGRS+E NFV+KGKVVVAKNPCLHPGDVR+LDA+DVKALHHMV
Sbjct: 721 DETQTLEYGQVFVHCSIPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHMV 780
Query: 781 DCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTMQLDHDVTI 840
DCVVFPQKGKRPHPNECSGSDLDGDLYFVCWD ELTCIK VKPMSY+PAPT+QLDHDVTI
Sbjct: 781 DCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDTELTCIKQVKPMSYKPAPTIQLDHDVTI 840
Query: 841 EEVQEYLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKLAKLFSIAVDFPKTGVPAN 900
EEVQEY ANYMVNDGLGAIANAHTVFADKN KKAMS ECIKLAKLFSIAVDFPKTGVPAN
Sbjct: 841 EEVQEYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECIKLAKLFSIAVDFPKTGVPAN 900
Query: 901 LPRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSSDVNTLEIFTREVAINCYDPD 960
LPRNLRVHEYPDFMDKPNK TY SNGVLGKLF+GVKDVSSDV+ EIFTREVA CYDPD
Sbjct: 901 LPRNLRVHEYPDFMDKPNKATYVSNGVLGKLFRGVKDVSSDVSAFEIFTREVATKCYDPD 960
Query: 961 MEVDGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRNDLEQI 1020
MEVDGF+KYL EAFDYKT+YDFKLGNLMDYYGIKTEPELVSGNIL+MAKSFDKR DLEQI
Sbjct: 961 MEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRKDLEQI 1020
Query: 1021 TFAMKSLRKEARAWFNEKGSKSTYDNSKGEEEEYAKASAWYHVTYHPDYWGRYNEGMQRD 1080
FAMKSLRKE R WFNE SKSTYD+ ++EYA+ASAWY VTYHPDYWG YNEG +RD
Sbjct: 1021 AFAMKSLRKEVRFWFNENESKSTYDDI---QDEYARASAWYCVTYHPDYWGCYNEGTKRD 1080
Query: 1081 HFLSFPWCVADKLIQIKREKTLLMSSSPMSSLIH 1110
HFLSFPWCVADKLIQIKREK + +SSP SSL+H
Sbjct: 1081 HFLSFPWCVADKLIQIKREKMSMRNSSPKSSLLH 1111
BLAST of Bhi12G000832 vs. ExPASy TrEMBL
Match:
A0A0A0KRH3 (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G564290 PE=3 SV=1)
HSP 1 Score: 1952.9 bits (5058), Expect = 0.0e+00
Identity = 963/1116 (86.29%), Postives = 1019/1116 (91.31%), Query Frame = 0
Query: 1 MGKTIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRISKPKDEKTRFTFVTVRFKSELAA 60
MGKTIEIYGFRP+VT DEVKEFLENHTGDGTV TVRISKPKDEK RFT VTV FKS+LAA
Sbjct: 1 MGKTIEIYGFRPQVTADEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVLFKSKLAA 60
Query: 61 EYIVEKATAAEKKLWFGSSYLKAREVERASPA---RGGGEMERMEDVKGHLGSLISKDKM 120
EYIV K+T E+KLWF SSYLKARE+E+A A +G EMERMEDVKGHLGS+IS KM
Sbjct: 61 EYIVAKSTTEERKLWFESSYLKARELEKAVVAKETKGVLEMERMEDVKGHLGSMISNGKM 120
Query: 121 RVIWEGENWNVEFGIGVRKLSFYLSYEV-EYKMELAFENILGVEFRCPLNQPSKFFLIQL 180
RVIWEGE W+VEFG G RKL FYLSYEV EYKMEL FENIL VEFRCPLN+PSKFFLIQL
Sbjct: 121 RVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENILSVEFRCPLNEPSKFFLIQL 180
Query: 181 QGAPRIFKKSRSSSSSRLNSNE-FCFRWIRDVDFTPSSCIGQSFALCLELSPGHHLPPFF 240
QGAPRIF+K+ SSSSS L SN+ FRWIRDVDFTPSSCIGQSF +CL+LSP HHLPPFF
Sbjct: 181 QGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCIGQSFTICLQLSPSHHLPPFF 240
Query: 241 QNLVGYKETYAPFILQTGSSFSSISNLVPIITPPRGFDISYKTLFKINALVQHGYLPGPT 300
Q LVGYK TYAPFIL GSS S SNLVPIITPP+ FDISYK LFKINAL+QHGYL GPT
Sbjct: 241 QTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDISYKILFKINALLQHGYLSGPT 300
Query: 301 LDDEFFRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKHHYLSFYTSNQLPWKPNIS 360
LDDEFFRLVDSSRF DY++HALEK+FNLKECCY+PQKWLK YLS+YTSNQLPWK NIS
Sbjct: 301 LDDEFFRLVDSSRFHSDYIDHALEKLFNLKECCYKPQKWLKDQYLSYYTSNQLPWKSNIS 360
Query: 361 LDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEDLDKLHSIDL 420
LDDGLVYVHRVQITP KVYF GPEANLSNRVVRRFI DIDNFLRVSFVDE+LDKLHSIDL
Sbjct: 361 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 420
Query: 421 APRSSSAGNSERTRVYDRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSA 480
APRSSS NS+RTRVYDR++SVL+NGIVIG+KKFEFLAFSASQLRENSFWMFASREGLSA
Sbjct: 421 APRSSSHENSQRTRVYDRVVSVLKNGIVIGNKKFEFLAFSASQLRENSFWMFASREGLSA 480
Query: 481 ADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEHEFEVIPDVEVERKKTKYCFSD 540
ADIREWMGDF IRNVAKYAARLGQSFGSSRKTLCVEEHE EVIPDVEVERK YCFSD
Sbjct: 481 ADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNIMYCFSD 540
Query: 541 GIGKISKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYMSL 600
GIGKISKTLA+KVAEKCGLI+HTPSAFQIRYAGYKGVVAIDPT KKKLSLR SMLKYMSL
Sbjct: 541 GIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDPTSKKKLSLRNSMLKYMSL 600
Query: 601 DTQLDVLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSKALEVL 660
DTQLDVL WSKYQPCFLNRQVINLLSTLGI D VFVKKQKEAIDQLDSILEDPS+ALEVL
Sbjct: 601 DTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEAIDQLDSILEDPSRALEVL 660
Query: 661 ELMSPGEMTGILKELLLFYKPNEEPFLNMMLRTFRADKFLDLRTKSRIFVPKGRTMMGCL 720
ELMSPGEMT ILKELL FY PNEEPFLNMMLRTFRA+K LDL+TKSRIFVP+GRTM+GCL
Sbjct: 661 ELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPEGRTMIGCL 720
Query: 721 DETRTLEYGQVFVHCSIPGRSNESNFVIKGKVVVAKNPCLHPGDVRVLDAVDVKALHHMV 780
DETRTLEYGQVFVHCS+P RS+E NFV+KGK+VVAKNPCLHPGDVRVLDAVDVKALHHMV
Sbjct: 721 DETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHPGDVRVLDAVDVKALHHMV 780
Query: 781 DCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTMQLDHDVTI 840
DCVVFPQKGKRPHPNECSGSDLDGDLYF CWD ELTCIK VKPM+YEPAPT+QL+HDVTI
Sbjct: 781 DCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVKPMNYEPAPTIQLNHDVTI 840
Query: 841 EEVQEYLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKLAKLFSIAVDFPKTGVPAN 900
EE+QEY ANYMVNDG+GAIANAHTVFADKN KKAMS ECIKLAKLFSIAVDFPKTGVPAN
Sbjct: 841 EEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKLAKLFSIAVDFPKTGVPAN 900
Query: 901 LPRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSSDVNTLEIFTREVAINCYDPD 960
LPRNLRVHEYPDFMDKPNKPTY SNGVLGKLF+GVKDVSSDVNT EIFTREVA YDPD
Sbjct: 901 LPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDVNTFEIFTREVATKYYDPD 960
Query: 961 MEVDGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRNDLEQI 1020
MEVDGF+KYL EAFDYKT+YDFKLGNLMDYYGIKTEPELVSGN+L+MAKSFDKRNDLEQI
Sbjct: 961 MEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNVLKMAKSFDKRNDLEQI 1020
Query: 1021 TFAMKSLRKEARAWFNEKGSKSTYDNSKGEEEEYAKASAWYHVTYHPDYWGRYNEGMQRD 1080
TFAMKSLRKE R+WFNE SK TYD+ E+EYAKASAWY+VTYHPDYWG YNEGMQRD
Sbjct: 1021 TFAMKSLRKEVRSWFNENESKFTYDDI---EDEYAKASAWYYVTYHPDYWGCYNEGMQRD 1080
Query: 1081 HFLSFPWCVADKLIQIKREKTLLMSSSPMSSLIHKF 1112
HFLSFPWCVADKLIQIKR+K L +S P+SSL H F
Sbjct: 1081 HFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNF 1113
BLAST of Bhi12G000832 vs. ExPASy TrEMBL
Match:
A0A1D8RK46 (RNA-dependent RNA polymerase (Fragment) OS=Cucumis sativus OX=3659 GN=RDR1c2 PE=2 SV=1)
HSP 1 Score: 1951.0 bits (5053), Expect = 0.0e+00
Identity = 961/1116 (86.11%), Postives = 1019/1116 (91.31%), Query Frame = 0
Query: 1 MGKTIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRISKPKDEKTRFTFVTVRFKSELAA 60
MGKTIEIYGFRP+VT DEVKEFLENHTGDGTV TVRISKPKDEK RFT VTV FKS+LAA
Sbjct: 1 MGKTIEIYGFRPQVTADEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVLFKSKLAA 60
Query: 61 EYIVEKATAAEKKLWFGSSYLKAREVER---ASPARGGGEMERMEDVKGHLGSLISKDKM 120
EYIV K+T E+KLWF SSYLKARE+E+ A+ +G EMERMEDVKGHLGS+IS KM
Sbjct: 61 EYIVAKSTTEERKLWFESSYLKARELEKAVVANETKGVLEMERMEDVKGHLGSMISNGKM 120
Query: 121 RVIWEGENWNVEFGIGVRKLSFYLSYEV-EYKMELAFENILGVEFRCPLNQPSKFFLIQL 180
RVIWEGE W+VEFG G RKL FYLSYEV EYKMEL FENIL VEFRCPLN+PSKFFLIQL
Sbjct: 121 RVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENILSVEFRCPLNEPSKFFLIQL 180
Query: 181 QGAPRIFKKSRSSSSSRLNSNE-FCFRWIRDVDFTPSSCIGQSFALCLELSPGHHLPPFF 240
QGAPRIF+K+ SSSSS L SN+ FRWIRDVDFTPSSCIGQSF +CL+LSP HHLPPFF
Sbjct: 181 QGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCIGQSFTICLQLSPSHHLPPFF 240
Query: 241 QNLVGYKETYAPFILQTGSSFSSISNLVPIITPPRGFDISYKTLFKINALVQHGYLPGPT 300
Q LVGYK TYAPFIL GSS S SNLVPIITPP+ FDISYK LFKINAL+QHGYL GPT
Sbjct: 241 QTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDISYKILFKINALLQHGYLSGPT 300
Query: 301 LDDEFFRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKHHYLSFYTSNQLPWKPNIS 360
LDDEFFRLVDSSRF DY++HALEK+FNLKECCY+PQKWLK YLS+YTSNQLPWK NIS
Sbjct: 301 LDDEFFRLVDSSRFHSDYIDHALEKLFNLKECCYKPQKWLKDQYLSYYTSNQLPWKSNIS 360
Query: 361 LDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEDLDKLHSIDL 420
LDDGLVYVHRVQITP KVYF GPEANLSNRVVRRFI DIDNFLRVSFVDE+LDKLHSIDL
Sbjct: 361 LDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSIDL 420
Query: 421 APRSSSAGNSERTRVYDRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSA 480
APRSSS NS+RTRVYDR++SVL+NGIVIG+KKFEFLAFSASQL+ENSFWMFASREGLSA
Sbjct: 421 APRSSSHENSQRTRVYDRVVSVLKNGIVIGNKKFEFLAFSASQLKENSFWMFASREGLSA 480
Query: 481 ADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEHEFEVIPDVEVERKKTKYCFSD 540
ADIREWMGDF IRNVAKYAARLGQSFGSSRKTLCVEEHE EVIPDVEVERK YCFSD
Sbjct: 481 ADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNIIYCFSD 540
Query: 541 GIGKISKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYMSL 600
GIGKISKTLA+KVAEKCGLI+HTPSAFQIRYAGYKGVVAIDPT KKKLSLR SMLKYMSL
Sbjct: 541 GIGKISKTLAKKVAEKCGLINHTPSAFQIRYAGYKGVVAIDPTSKKKLSLRNSMLKYMSL 600
Query: 601 DTQLDVLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSKALEVL 660
DTQLDVL WSKYQPCFLNRQVINLLSTLGI D VFVKKQKEAIDQLDSILEDPS+ALEVL
Sbjct: 601 DTQLDVLSWSKYQPCFLNRQVINLLSTLGIGDDVFVKKQKEAIDQLDSILEDPSRALEVL 660
Query: 661 ELMSPGEMTGILKELLLFYKPNEEPFLNMMLRTFRADKFLDLRTKSRIFVPKGRTMMGCL 720
ELMSPGEMT ILKELL FY PNEEPFLNMMLRTFRA+K LDL+TKSRIFVP+GRTM+GCL
Sbjct: 661 ELMSPGEMTSILKELLSFYMPNEEPFLNMMLRTFRANKLLDLKTKSRIFVPEGRTMIGCL 720
Query: 721 DETRTLEYGQVFVHCSIPGRSNESNFVIKGKVVVAKNPCLHPGDVRVLDAVDVKALHHMV 780
DETRTLEYGQVFVHCS+P RS+E NFV+KGK+VVAKNPCLHPGDVRVLDAVDVKALHHMV
Sbjct: 721 DETRTLEYGQVFVHCSVPRRSSEGNFVVKGKIVVAKNPCLHPGDVRVLDAVDVKALHHMV 780
Query: 781 DCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTMQLDHDVTI 840
DCVVFPQKGKRPHPNECSGSDLDGDLYF CWD ELTCIK VKPM+YEPAPT+QL+HDVTI
Sbjct: 781 DCVVFPQKGKRPHPNECSGSDLDGDLYFACWDLELTCIKQVKPMNYEPAPTIQLNHDVTI 840
Query: 841 EEVQEYLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKLAKLFSIAVDFPKTGVPAN 900
EE+QEY ANYMVNDG+GAIANAHTVFADKN KKAMS ECIKLAKLFSIAVDFPKTGVPAN
Sbjct: 841 EEIQEYFANYMVNDGIGAIANAHTVFADKNSKKAMSVECIKLAKLFSIAVDFPKTGVPAN 900
Query: 901 LPRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSSDVNTLEIFTREVAINCYDPD 960
LPRNLRVHEYPDFMDKPNKPTY SNGVLGKLF+GVKDVSSDVNT EIFTREVA YDPD
Sbjct: 901 LPRNLRVHEYPDFMDKPNKPTYVSNGVLGKLFRGVKDVSSDVNTFEIFTREVATKYYDPD 960
Query: 961 MEVDGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRNDLEQI 1020
MEVDGF+KYL EAFDYKT+YDFKLGNLMDYYGIKTEPELVSGN+L+MAKSFDKRNDLEQI
Sbjct: 961 MEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNVLKMAKSFDKRNDLEQI 1020
Query: 1021 TFAMKSLRKEARAWFNEKGSKSTYDNSKGEEEEYAKASAWYHVTYHPDYWGRYNEGMQRD 1080
TFAMKSLRKE R+WFNE SK TYD+ E+EYAKASAWY+VTYHPDYWG YNEGMQRD
Sbjct: 1021 TFAMKSLRKEVRSWFNENESKFTYDDI---EDEYAKASAWYYVTYHPDYWGCYNEGMQRD 1080
Query: 1081 HFLSFPWCVADKLIQIKREKTLLMSSSPMSSLIHKF 1112
HFLSFPWCVADKLIQIKR+K L +S P+SSL H F
Sbjct: 1081 HFLSFPWCVADKLIQIKRDKMTLKNSYPVSSLFHNF 1113
BLAST of Bhi12G000832 vs. ExPASy TrEMBL
Match:
A0A6J1FF44 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111444909 PE=3 SV=1)
HSP 1 Score: 1911.3 bits (4950), Expect = 0.0e+00
Identity = 943/1108 (85.11%), Postives = 1010/1108 (91.16%), Query Frame = 0
Query: 1 MGKTIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRISKPKDEKTRFTFVTVRFKSELAA 60
MGKTIEIYGF +VT DEVKEF+ENHTGDGTVLTVRISK DEK RFTF TV+F S+L
Sbjct: 7 MGKTIEIYGFPTQVTADEVKEFIENHTGDGTVLTVRISKLNDEKARFTFATVQFTSKLGG 66
Query: 61 EYIVEKATAAEKKLWFGSSYLKAREVER--ASPARGGGEMERMEDVKGHLGSLISKDKMR 120
EY+V +A AAEK+LWFGSSYLKAR+VER + AR GE+ERME+V GSL+SK++M+
Sbjct: 67 EYVVAQA-AAEKRLWFGSSYLKARKVEREIKTAARVHGELERMENVNVQWGSLVSKEEMK 126
Query: 121 VIWEGENWNVEFGIGVRKLSFYLSYE-VEYKMELAFENILGVEFRCPLNQPSKFFLIQLQ 180
VIW+G W+VE+GIGVRKL FYLSYE VEYKMEL FENILGV+ RC +++ SK FLIQLQ
Sbjct: 127 VIWKGGKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILGVQLRCSVDRGSKLFLIQLQ 186
Query: 181 GAPRIFKKSRSSSSSRLNSNEFC-FRWIRDVDFTPSSCIGQSFALCLELSPGHHLPPFFQ 240
GAPRIFKK+ SSSSRL+S E FRWIRDVDFTPSSCIGQSFALCLELS G LP FFQ
Sbjct: 187 GAPRIFKKAPLSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGDQLPSFFQ 246
Query: 241 NLVGYKETYAPFILQTGSSFSSISNLVPIITPPRGFDISYKTLFKINALVQHGYLPGPTL 300
LVGYKE+YAPFILQTGSS SSISNLVPIITPP+GFDI YK LFKINAL+QHGYLPGP L
Sbjct: 247 TLVGYKESYAPFILQTGSSLSSISNLVPIITPPQGFDIPYKILFKINALLQHGYLPGPAL 306
Query: 301 DDEFFRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKHHYLSFYTSNQLPWKPNISL 360
D+EFFRLVDSSRFRPDYVE+AL+K+F+ KECCYEPQKWLK YLSFY+S QLPWKPNISL
Sbjct: 307 DNEFFRLVDSSRFRPDYVEYALDKLFHFKECCYEPQKWLKQQYLSFYSSKQLPWKPNISL 366
Query: 361 DDGLVYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEDLDKLHSIDLA 420
DDGLVYVHRVQITP+KVYFRGPEANLSNRVVR FIDD+DNFLRVSFVDE+LDKLHSIDL+
Sbjct: 367 DDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDKLHSIDLS 426
Query: 421 PRSSSAGNSERTRVYDRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWMFASREGLSAA 480
PR +SA N RTRVYDR+LSVLRNGIVIGDKKFEFLAFSASQLRENS WMFASR+GLSAA
Sbjct: 427 PR-TSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASRKGLSAA 486
Query: 481 DIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEHEFEVIPDVEVERKKTKYCFSDG 540
DIREWMGD R+IRNVAKYAARLGQSFGSSR+TLCVE+HE EVI DVEVE K YCFSDG
Sbjct: 487 DIREWMGDLRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKITYCFSDG 546
Query: 541 IGKISKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSMLKYMSLD 600
IGKIS TLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPT KKLSLRKSMLKY SLD
Sbjct: 547 IGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSMLKYTSLD 606
Query: 601 TQLDVLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSKALEVLE 660
TQ+DVL WSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPS+ALEVLE
Sbjct: 607 TQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSRALEVLE 666
Query: 661 LMSPGEMTGILKELLLFYKPNEEPFLNMMLRTFRADKFLDLRTKSRIFVPKGRTMMGCLD 720
LMSPGEMT ILKELLL YKPNEEPFLNMMLRTFRA K LDLRTKSRIFVPKGRTMMGCLD
Sbjct: 667 LMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRTMMGCLD 726
Query: 721 ETRTLEYGQVFVHCSIPGRSNESNFVIKGKVVVAKNPCLHPGDVRVLDAVDVKALHHMVD 780
ETRTLEYGQVFVHCS+PGRS+ESNFV+KGKVVVAKNPCLHPGDVR+LDAVDVKALHHMVD
Sbjct: 727 ETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKALHHMVD 786
Query: 781 CVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTMQLDHDVTIE 840
CVVFPQKGKRPHPNECSGSDLDGDLYFV WDPELT IKPVKPMSYEPAPTMQLDHDVTIE
Sbjct: 787 CVVFPQKGKRPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMQLDHDVTIE 846
Query: 841 EVQEYLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKLAKLFSIAVDFPKTGVPANL 900
EVQ YL YMVNDGLG IANAHTVFADK PKKAM+ ECIKLAKLFSIAVDFPKTGVPAN
Sbjct: 847 EVQGYLVKYMVNDGLGGIANAHTVFADKKPKKAMAAECIKLAKLFSIAVDFPKTGVPANF 906
Query: 901 PRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSSDVNTLEIFTREVAINCYDPDM 960
P NLRV EYPDFM+KP+KPTY SNGVLGKLF+GVKDVSSDVNT+EIF+REVA CYDPDM
Sbjct: 907 PHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATKCYDPDM 966
Query: 961 EVDGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRNDLEQIT 1020
EVDGF+ YLSEAF++K RYDFKLGNLMDYYGIKTEPEL+SGNILRMAKSFDKRND+EQI+
Sbjct: 967 EVDGFEDYLSEAFEFKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRNDMEQIS 1026
Query: 1021 FAMKSLRKEARAWFNEKGSKSTYDNSKGEEEEYAKASAWYHVTYHPDYWGRYNEGMQRDH 1080
AMKSLRKEAR+WFNEKGSKS YD + EEYAKASAWY VTYHPDYWGRYNEGMQRDH
Sbjct: 1027 LAMKSLRKEARSWFNEKGSKSAYDEDDNKNEEYAKASAWYRVTYHPDYWGRYNEGMQRDH 1086
Query: 1081 FLSFPWCVADKLIQIKREKTLLMSSSPM 1105
FLSFPWCV+DKLIQIKREKT L++ SP+
Sbjct: 1087 FLSFPWCVSDKLIQIKREKTCLVNFSPV 1112
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LQV2 | 0.0e+00 | 58.17 | RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1 | [more] |
Q0DXS3 | 2.6e-267 | 61.62 | Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947... | [more] |
O82504 | 4.1e-212 | 38.28 | RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1 | [more] |
Q7XM31 | 2.5e-209 | 41.66 | Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947... | [more] |
Q9SG02 | 3.5e-163 | 36.58 | RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_038875555.1 | 0.0e+00 | 100.00 | probable RNA-dependent RNA polymerase 1 [Benincasa hispida] | [more] |
ADN33705.1 | 0.0e+00 | 85.09 | RNA-dependent RNA polymerase [Cucumis melo subsp. melo] | [more] |
ALM88235.1 | 0.0e+00 | 86.54 | RNA-dependent RNA polymerase 1c [Cucumis sativus] | [more] |
XP_031740912.1 | 0.0e+00 | 86.62 | probable RNA-dependent RNA polymerase 1 [Cucumis sativus] >KGN52010.2 hypothetic... | [more] |
XP_031741021.1 | 0.0e+00 | 86.20 | probable RNA-dependent RNA polymerase 1 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
E5GB63 | 0.0e+00 | 85.09 | RNA-dependent RNA polymerase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1 | [more] |
A0A0S1YCZ4 | 0.0e+00 | 86.54 | RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=RDR1c PE=2 SV=1 | [more] |
A0A0A0KRH3 | 0.0e+00 | 86.29 | RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G564290 PE=3 SV=... | [more] |
A0A1D8RK46 | 0.0e+00 | 86.11 | RNA-dependent RNA polymerase (Fragment) OS=Cucumis sativus OX=3659 GN=RDR1c2 PE=... | [more] |
A0A6J1FF44 | 0.0e+00 | 85.11 | RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111444909 PE=3 ... | [more] |