Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGAAAAGATTCGAACACGTGGCAGGCTTAGAGCCGTGAGATCATCGAAGAGAGAACCAAGCAATAAGCTGGTCAGGGAGACGGAAGCGATGGCGGCGCGTGAGTGGAACGCGCTGGTCCTAGAAGAAAAGAGGAGTGCGGCAGAGAGGGCAGTTGAAGTTGAGATGGTGAAGCCAGCCCGTCAAGGCAGTCCTTTGTGGAAGAGGTGCGGCAGGGAGGCGGCGGACAGGGTGGCCGGCGGAGAGAGGGGAGAGGCAGACGACGCAATGGAGGCAGAAGTGGGCGTTGTCGAGGGAGAGAAGCGGTGGGAGAGGAGGCGATTAAGATGA AGGTGATGGGGGAGAGGGGAAATATCAGGGAGAGGAGACGGTCGTCGGCGGCGGGAGAATGCGGCGGAGAGGAAGGCGGAGCGGAGGAGGGAGAGGAAATTGGCGAGGAGAGAGAGGAAGAACGAGAGGGAGAGAGTGGTTAGGAGAAATCGTTGAGTTGGGTTTGTAAACCCATGTTTTTTGTTTTTTGAAAATGGTAAAGTGTTGTTGAGAAATTTGAGAGAAAGAGAGGATATAGAACGAGTTGGGG mRNA sequence
ATGAATGAAAAGATTCGAACACGTGGCAGGCTTAGAGCCGTGAGATCATCGAAGAGAGAACCAAGCAATAAGCTGGTCAGGGAGACGGAAGCGATGGCGGCGCGTGAGTGGAACGCGCTGGTCCTAGAAGAAAAGAGGAGTGCGGCAGAGAGGGCAGTTGAAGTTGAGATGGTGAAGCCAGCCCGTCAAGGCAGTCCTTTGTGGAAGAGGTGCGGCAGGGAGGCGGCGGACAGGGTGGCCGGCGGAGAGAGGGGAGAGGCAGACGACGCAATGGAGGCAGAAGTGGGCGTTGTCGAGGGAGAGAAGCGGTGGGAGAGGAGGCGATTAAGATGAAGGTGATGGGGGAGAGGGGAAATATCAGGGAGAGGAGACGGTCGTCGGCGGCGGGAGAATGCGGCGGAGAGGAAGGCGGAGCGGAGGAGGGAGAGGAAATTGGCGAGGAGAGAGAGGAAGAACGAGAGGGAGAGAGTGGTTAGGAGAAATCGTTGAGTTGGGTTTGTAAACCCATGTTTTTTGTTTTTTGAAAATGGTAAAGTGTTGTTGAGAAATTTGAGAGAAAGAGAGGATATAGAACGAGTTGGGG Coding sequence (CDS)
ATGAATGAAAAGATTCGAACACGTGGCAGGCTTAGAGCCGTGAGATCATCGAAGAGAGAACCAAGCAATAAGCTGGTCAGGGAGACGGAAGCGATGGCGGCGCGTGAGTGGAACGCGCTGGTCCTAGAAGAAAAGAGGAGTGCGGCAGAGAGGGCAGTTGAAGTTGAGATGGTGAAGCCAGCCCGTCAAGGCAGTCCTTTGTGGAAGAGGTGCGGCAGGGAGGCGGCGGACAGGGTGGCCGGCGGAGAGAGGGGAGAGGCAGACGACGCAATGGAGGCAGAAGTGGGCGTTGTCGAGGGAGAGAAGCGGTGGGAGAGGAGGCGATTAAGATGA Protein sequence
MNEKIRTRGRLRAVRSSKREPSNKLVRETEAMAAREWNALVLEEKRSAAERAVEVEMVKPARQGSPLWKRCGREAADRVAGGERGEADDAMEAEVGVVEGEKRWERRRLR
Homology
BLAST of Bhi12G000746 vs. NCBI nr
Match:
KGN51526.1 (hypothetical protein Csa_008164 [Cucumis sativus])
HSP 1 Score: 64.7 bits (156), Expect = 5.7e-07
Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 0
Query: 25 LVRETEAMAAREWNALVLEEKRSAAERAVEVEMVKPARQGSPLWKRCGREAADRVAGGER 84 +VRE EA+ ARE +ALVL+E+R AAERAVEVEMVKPA + + + E AD V G ER Sbjct: 1 MVREAEAV-ARERDALVLKERR-AAERAVEVEMVKPAVEAVFMEEVAAGETADEVTGAER 60 Query: 85 GEADDAMEAEVGVV 99 GE DDA+ VGVV Sbjct: 61 GETDDAIGGGVGVV 72
BLAST of Bhi12G000746 vs. ExPASy TrEMBL
Match:
A0A0A0KUZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576680 PE=4 SV=1)
HSP 1 Score: 64.7 bits (156), Expect = 2.8e-07
Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 0
Query: 25 LVRETEAMAAREWNALVLEEKRSAAERAVEVEMVKPARQGSPLWKRCGREAADRVAGGER 84 +VRE EA+ ARE +ALVL+E+R AAERAVEVEMVKPA + + + E AD V G ER Sbjct: 1 MVREAEAV-ARERDALVLKERR-AAERAVEVEMVKPAVEAVFMEEVAAGETADEVTGAER 60 Query: 85 GEADDAMEAEVGVV 99 GE DDA+ VGVV Sbjct: 61 GETDDAIGGGVGVV 72
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
KGN51526.1 5.7e-07 59.46 hypothetical protein Csa_008164 [Cucumis sativus] [more]
Match Name E-value Identity Description
A0A0A0KUZ6 2.8e-07 59.46 Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576680 PE=4 SV=1 [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
A T G A A T G A A A A G A T T C G A A C A C G T G G C A G G C T T A G A G C C G T G A G A T C A T C G A A G A G A G A A C C A A G C A A T A A G C T G G T C A G G G A G A C G G A A G C G A T G G C G G C G C G T G A G T G G A A C G C G C T G G T C C T A G A A G A A A A G A G G A G T G C G G C A G A G A G G G C A G T T G A A G T T G A G A T G G T G A A G C C A G C C C G T C A A G G C A G T C C T T T G T G G A A G A G G T G C G G C A G G G A G G C G G C G G A C A G G G T G G C C G G C G G A G A G A G G G G A G A G G C A G A C G A C G C A A T G G A G G C A G A A G T G G G C G T T G T C G A G G G A G A G A A G C G G T G G G A G A G G A G G C G A T T A A G A T G A A G G T G A T G G G G G A G A G G G G A A A T A T C A G G G A G A G G A G A C G G T C G T C G G C G G C G G G A G A A T G C G G C G G A G A G G A A G G C G G A G C G G A G G A G G G A G A G G A A A T T G G C G A G G A G A G A G A G G A A G A A C G A G A G G G A G A G A G T G G T T A G G A G A A A T C G T T G A G T T G G G T T T G T A A A C C C A T G T T T T T T G T T T T T T G A A A A T G G T A A A G T G T T G T T G A G A A A T T T G A G A G A A A G A G A G G A T A T A G A A C G A G T T G G G G 50 100 150 200 250 300 350 400 450 500 550 Score = Sequence mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..25
Relationships
The following mRNA feature(s) are a part of this gene: