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Bhi12G000613 (gene) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTTCCCACAAAGAGCAGCAGAGAGTTCTATTGCAATATGTTCATGTCACAAGGAAGCTAAAGTTGGAGGGGGCTATACTTGCCCTCGATGCAAAGCACGAGTTTGTGAGCTGCCCACAGAGTGTCGGATTTGTGGATTAACACTTATCTCCTCACCCCATTTGGCTAGGTCATATCACCATCTCTTTCCAATTATACCATTTGATGAAGTCTCTGATAAAGTACTTCATGATCCACGAAATCAACTTCCAAAAGTTTGTTTTGGCTGCCAAGAAAGCCTCATGAATCCTGGTAAGAACTCAAATAAACATGATATTTGGAAGCTTTCAAATGAAACTTCTTTTTATGGCATTTGTTGTCATCTAATAGTATAATGCACATGTCTAATTAGTCAGCATTTTGTGTCAGGATATCTTAATCCATTATCCTCTTTACTACTAGGAGTTTATTAATGCCCTGTATAATCTGACTCCTAAAGCAAAGAATGTTGCATAAAAGAAGACTTCCACATTTCCTGTTCGTGTTTTGGTAATTTTTCAGTACTAATTATGTCTAGCACTGTAGCACCAGTACTGCTGAAACAGTGTTATCGATGTGAATTGATTTTGCCTTCTCTGTGTTCGGTGACTTCCTTCTATTACATTGTTCATATAGGCAATAGGGAGCTACTTACACCTGTGACATGCACGTATGAATAAATATGGATGATTTTTGTCCCTATTGTAATTTACTGAACTGAACTTTTGACCCTACAATTACTATGTACTTATTCAAATGTACTTTTCATTTTAGGCACAGGTAACAGCCCAGGCATCCGTGTTTCTTGCCCAAAGTGCAAACAACACTTCTGTCTTGATTGTGATATTTATATCCACGAGAGCTTGCATAATTGTCCTGGCTGTGAGAGTTTCAGGCGTCCCAAATCGGCGACTTCTGATGAATGA ATGGGGTTCCCACAAAGAGCAGCAGAGAGTTCTATTGCAATATGTTCATGTCACAAGGAAGCTAAAGTTGGAGGGGGCTATACTTGCCCTCGATGCAAAGCACGAGTTTGTGAGCTGCCCACAGAGTGTCGGATTTGTGGATTAACACTTATCTCCTCACCCCATTTGGCTAGGTCATATCACCATCTCTTTCCAATTATACCATTTGATGAAGTCTCTGATAAAGTACTTCATGATCCACGAAATCAACTTCCAAAAGTTTGTTTTGGCTGCCAAGAAAGCCTCATGAATCCTGGCACAGGTAACAGCCCAGGCATCCGTGTTTCTTGCCCAAAGTGCAAACAACACTTCTGTCTTGATTGTGATATTTATATCCACGAGAGCTTGCATAATTGTCCTGGCTGTGAGAGTTTCAGGCGTCCCAAATCGGCGACTTCTGATGAATGA ATGGGGTTCCCACAAAGAGCAGCAGAGAGTTCTATTGCAATATGTTCATGTCACAAGGAAGCTAAAGTTGGAGGGGGCTATACTTGCCCTCGATGCAAAGCACGAGTTTGTGAGCTGCCCACAGAGTGTCGGATTTGTGGATTAACACTTATCTCCTCACCCCATTTGGCTAGGTCATATCACCATCTCTTTCCAATTATACCATTTGATGAAGTCTCTGATAAAGTACTTCATGATCCACGAAATCAACTTCCAAAAGTTTGTTTTGGCTGCCAAGAAAGCCTCATGAATCCTGGCACAGGTAACAGCCCAGGCATCCGTGTTTCTTGCCCAAAGTGCAAACAACACTTCTGTCTTGATTGTGATATTTATATCCACGAGAGCTTGCATAATTGTCCTGGCTGTGAGAGTTTCAGGCGTCCCAAATCGGCGACTTCTGATGAATGA MGFPQRAAESSIAICSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRNQLPKVCFGCQESLMNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRRPKSATSDE Homology
BLAST of Bhi12G000613 vs. TAIR 10
Match: AT1G05055.1 (general transcription factor II H2 ) HSP 1 Score: 239.2 bits (609), Expect = 2.1e-63 Identity = 108/146 (73.97%), Postives = 120/146 (82.19%), Query Frame = 0
BLAST of Bhi12G000613 vs. ExPASy Swiss-Prot
Match: Q9ZVN9 (General transcription factor IIH subunit 2 OS=Arabidopsis thaliana OX=3702 GN=GTF2H2 PE=1 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 3.0e-62 Identity = 108/146 (73.97%), Postives = 120/146 (82.19%), Query Frame = 0
BLAST of Bhi12G000613 vs. ExPASy Swiss-Prot
Match: Q86KZ2 (General transcription factor IIH subunit 2 OS=Dictyostelium discoideum OX=44689 GN=gtf2h2 PE=3 SV=2) HSP 1 Score: 150.2 bits (378), Expect = 1.8e-35 Identity = 69/137 (50.36%), Postives = 92/137 (67.15%), Query Frame = 0
BLAST of Bhi12G000613 vs. ExPASy Swiss-Prot
Match: O74995 (General transcription and DNA repair factor IIH subunit ssl1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ssl1 PE=1 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 3.8e-33 Identity = 66/142 (46.48%), Postives = 86/142 (60.56%), Query Frame = 0
BLAST of Bhi12G000613 vs. ExPASy Swiss-Prot
Match: Q04673 (General transcription and DNA repair factor IIH subunit SSL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SSL1 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 3.2e-32 Identity = 70/141 (49.65%), Postives = 79/141 (56.03%), Query Frame = 0
BLAST of Bhi12G000613 vs. ExPASy Swiss-Prot
Match: Q6P1K8 (General transcription factor IIH subunit 2-like protein OS=Homo sapiens OX=9606 GN=GTF2H2C PE=1 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 3.9e-30 Identity = 63/146 (43.15%), Postives = 85/146 (58.22%), Query Frame = 0
BLAST of Bhi12G000613 vs. NCBI nr
Match: XP_038874496.1 (general transcription factor IIH subunit 2 isoform X1 [Benincasa hispida]) HSP 1 Score: 330.9 bits (847), Expect = 5.7e-87 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Bhi12G000613 vs. NCBI nr
Match: KAA0055121.1 (general transcription factor IIH subunit 2 [Cucumis melo var. makuwa] >TYK20738.1 general transcription factor IIH subunit 2 [Cucumis melo var. makuwa]) HSP 1 Score: 320.9 bits (821), Expect = 5.9e-84 Identity = 143/148 (96.62%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of Bhi12G000613 vs. NCBI nr
Match: XP_004143721.1 (general transcription factor IIH subunit 2 [Cucumis sativus] >XP_031741116.1 general transcription factor IIH subunit 2 [Cucumis sativus] >KGN50372.1 hypothetical protein Csa_000481 [Cucumis sativus]) HSP 1 Score: 320.5 bits (820), Expect = 7.8e-84 Identity = 143/148 (96.62%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of Bhi12G000613 vs. NCBI nr
Match: KAG7036868.1 (General transcription factor IIH subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 318.5 bits (815), Expect = 3.0e-83 Identity = 140/148 (94.59%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of Bhi12G000613 vs. NCBI nr
Match: XP_022949453.1 (general transcription factor IIH subunit 2 [Cucurbita moschata] >XP_023525764.1 general transcription factor IIH subunit 2 [Cucurbita pepo subsp. pepo] >KAG6607180.1 General transcription factor IIH subunit 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 318.5 bits (815), Expect = 3.0e-83 Identity = 140/148 (94.59%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of Bhi12G000613 vs. ExPASy TrEMBL
Match: A0A5A7UNG8 (General transcription factor IIH subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001400 PE=3 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 2.9e-84 Identity = 143/148 (96.62%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of Bhi12G000613 vs. ExPASy TrEMBL
Match: A0A0A0KPM4 (General transcription factor IIH subunit OS=Cucumis sativus OX=3659 GN=Csa_5G169080 PE=3 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 3.8e-84 Identity = 143/148 (96.62%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of Bhi12G000613 vs. ExPASy TrEMBL
Match: A0A6J1K980 (General transcription factor IIH subunit OS=Cucurbita maxima OX=3661 GN=LOC111493405 PE=3 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.4e-83 Identity = 140/148 (94.59%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of Bhi12G000613 vs. ExPASy TrEMBL
Match: A0A6J1GC53 (General transcription factor IIH subunit OS=Cucurbita moschata OX=3662 GN=LOC111452792 PE=3 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.4e-83 Identity = 140/148 (94.59%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of Bhi12G000613 vs. ExPASy TrEMBL
Match: A0A1S3CUH8 (General transcription factor IIH subunit OS=Cucumis melo OX=3656 GN=LOC103504674 PE=3 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 2.4e-83 Identity = 142/148 (95.95%), Postives = 143/148 (96.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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