Bhi12G000467 (gene) Wax gourd (B227) v1

Overview


Name	Bhi12G000467
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Paired amphipathic helix protein Sin3-like 2-like
Location	chr12: 16719526 .. 16719831 (-)
RNA-Seq Expression	Bhi12G000467
Synteny	Bhi12G000467

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAGAAGGAAGTTCTCAGAATTTAACCCCCAAGGATTCGCTATCATATCTCAAGAGAGTGAGGGAAACATTTCAAAACGAAAGAGAAAAGTATGAACGTTTCCTGCGATTAATTCAAGATTTCAAGGCCCAAAGAATTGATACTGCGGAACTCTTTGCAACAGTAATGGACTTGTTTCAAGACCACCCACATCTTATTTTGGGCTTCAACATTTTCTTGCCCAAAAACTGTGAGATCATTCTTGCACCCCAGGACCAGGAGGATGATCAAGATCAAGATCCACCTCCACAAAACAAATAA

mRNA sequence

ATGGCGGAAGAAGGAAGTTCTCAGAATTTAACCCCCAAGGATTCGCTATCATATCTCAAGAGAGTGAGGGAAACATTTCAAAACGAAAGAGAAAAGTATGAACGTTTCCTGCGATTAATTCAAGATTTCAAGGCCCAAAGAATTGATACTGCGGAACTCTTTGCAACAGTAATGGACTTGTTTCAAGACCACCCACATCTTATTTTGGGCTTCAACATTTTCTTGCCCAAAAACTGTGAGATCATTCTTGCACCCCAGGACCAGGAGGATGATCAAGATCAAGATCCACCTCCACAAAACAAATAA

Coding sequence (CDS)

ATGGCGGAAGAAGGAAGTTCTCAGAATTTAACCCCCAAGGATTCGCTATCATATCTCAAGAGAGTGAGGGAAACATTTCAAAACGAAAGAGAAAAGTATGAACGTTTCCTGCGATTAATTCAAGATTTCAAGGCCCAAAGAATTGATACTGCGGAACTCTTTGCAACAGTAATGGACTTGTTTCAAGACCACCCACATCTTATTTTGGGCTTCAACATTTTCTTGCCCAAAAACTGTGAGATCATTCTTGCACCCCAGGACCAGGAGGATGATCAAGATCAAGATCCACCTCCACAAAACAAATAA

Protein sequence

MAEEGSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDLFQDHPHLILGFNIFLPKNCEIILAPQDQEDDQDQDPPPQNK

Homology

[Close]

BLAST of Bhi12G000467 vs. TAIR 10
Match: AT1G24190.1 (SIN3-like 3 )

HSP 1 Score: 94.7 bits (234), Expect = 4.4e-20
Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 1  MAEEGSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDL 60
          M   GS+Q LT  D+L+YLK V++ FQ++R KY+ FL ++++FK+QR+DTA +   V +L
Sbjct: 1  MVGGGSAQKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKEL 60

Query: 61 FQDHPHLILGFNIFLPKNCEIILAPQD 88
          F+ H  LILGFN FLPK  EI L P+D
Sbjct: 61 FKGHQELILGFNTFLPKGFEITLQPED 87

[Close]

BLAST of Bhi12G000467 vs. TAIR 10
Match: AT1G24190.2 (SIN3-like 3 )

HSP 1 Score: 94.7 bits (234), Expect = 4.4e-20
Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 1  MAEEGSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDL 60
          M   GS+Q LT  D+L+YLK V++ FQ++R KY+ FL ++++FK+QR+DTA +   V +L
Sbjct: 1  MVGGGSAQKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKEL 60

Query: 61 FQDHPHLILGFNIFLPKNCEIILAPQD 88
          F+ H  LILGFN FLPK  EI L P+D
Sbjct: 61 FKGHQELILGFNTFLPKGFEITLQPED 87

[Close]

BLAST of Bhi12G000467 vs. TAIR 10
Match: AT3G01320.1 (SIN3-like 1 )

HSP 1 Score: 94.7 bits (234), Expect = 4.4e-20
Identity = 49/89 (55.06%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 3   EEGS----SQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVM 62
           EEG     SQ LT  D+LSYL+ V+E FQ++REKY+RFL +++DFKAQR DT  + A V 
Sbjct: 42  EEGGSRRVSQKLTTNDALSYLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGVIARVK 101

Query: 63  DLFQDHPHLILGFNIFLPKNCEIILAPQD 88
           +LF+ H +LI GFN FLPK  EI L  +D
Sbjct: 102 ELFKGHNNLIYGFNTFLPKGYEITLIEED 130

[Close]

BLAST of Bhi12G000467 vs. TAIR 10
Match: AT3G01320.2 (SIN3-like 1 )

HSP 1 Score: 94.7 bits (234), Expect = 4.4e-20
Identity = 49/89 (55.06%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 3   EEGS----SQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVM 62
           EEG     SQ LT  D+LSYL+ V+E FQ++REKY+RFL +++DFKAQR DT  + A V 
Sbjct: 42  EEGGSRRVSQKLTTNDALSYLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGVIARVK 101

Query: 63  DLFQDHPHLILGFNIFLPKNCEIILAPQD 88
           +LF+ H +LI GFN FLPK  EI L  +D
Sbjct: 102 ELFKGHNNLIYGFNTFLPKGYEITLIEED 130

[Close]

BLAST of Bhi12G000467 vs. TAIR 10
Match: AT1G70060.1 (SIN3-like 4 )

HSP 1 Score: 90.1 bits (222), Expect = 1.1e-18
Identity = 45/96 (46.88%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 1  MAEEGSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDL 60
          M    S+Q LT  D+L+YLK V++ FQ++R+KY+ FL +++DFKAQR+DT  +   V +L
Sbjct: 1  MVGGSSAQKLTTNDALAYLKAVKDKFQDKRDKYDEFLEVMKDFKAQRVDTTGVILRVKEL 60

Query: 61 FQDHPHLILGFNIFLPKNCEIILAPQDQEDDQDQDP 97
          F+ +  LILGFN FLPK  EI L P+D +    + P
Sbjct: 61 FKGNRELILGFNTFLPKGFEITLRPEDDQPAAPKKP 96

[Close]

BLAST of Bhi12G000467 vs. ExPASy Swiss-Prot
Match: Q9SRH9 (Paired amphipathic helix protein Sin3-like 1 OS=Arabidopsis thaliana OX=3702 GN=SNL1 PE=1 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 6.2e-19
Identity = 49/89 (55.06%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 3   EEGS----SQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVM 62
           EEG     SQ LT  D+LSYL+ V+E FQ++REKY+RFL +++DFKAQR DT  + A V 
Sbjct: 42  EEGGSRRVSQKLTTNDALSYLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGVIARVK 101

Query: 63  DLFQDHPHLILGFNIFLPKNCEIILAPQD 88
           +LF+ H +LI GFN FLPK  EI L  +D
Sbjct: 102 ELFKGHNNLIYGFNTFLPKGYEITLIEED 130

[Close]

BLAST of Bhi12G000467 vs. ExPASy Swiss-Prot
Match: O48686 (Paired amphipathic helix protein Sin3-like 3 OS=Arabidopsis thaliana OX=3702 GN=SNL3 PE=1 SV=3)

HSP 1 Score: 94.7 bits (234), Expect = 6.2e-19
Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 1  MAEEGSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDL 60
          M   GS+Q LT  D+L+YLK V++ FQ++R KY+ FL ++++FK+QR+DTA +   V +L
Sbjct: 1  MVGGGSAQKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKEL 60

Query: 61 FQDHPHLILGFNIFLPKNCEIILAPQD 88
          F+ H  LILGFN FLPK  EI L P+D
Sbjct: 61 FKGHQELILGFNTFLPKGFEITLQPED 87

[Close]

BLAST of Bhi12G000467 vs. ExPASy Swiss-Prot
Match: O04539 (Paired amphipathic helix protein Sin3-like 4 OS=Arabidopsis thaliana OX=3702 GN=SNL4 PE=3 SV=3)

HSP 1 Score: 90.1 bits (222), Expect = 1.5e-17
Identity = 45/96 (46.88%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 1  MAEEGSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDL 60
          M    S+Q LT  D+L+YLK V++ FQ++R+KY+ FL +++DFKAQR+DT  +   V +L
Sbjct: 1  MVGGSSAQKLTTNDALAYLKAVKDKFQDKRDKYDEFLEVMKDFKAQRVDTTGVILRVKEL 60

Query: 61 FQDHPHLILGFNIFLPKNCEIILAPQDQEDDQDQDP 97
          F+ +  LILGFN FLPK  EI L P+D +    + P
Sbjct: 61 FKGNRELILGFNTFLPKGFEITLRPEDDQPAAPKKP 96

[Close]

BLAST of Bhi12G000467 vs. ExPASy Swiss-Prot
Match: Q9XIE1 (Paired amphipathic helix protein Sin3-like 5 OS=Arabidopsis thaliana OX=3702 GN=SNL5 PE=3 SV=3)

HSP 1 Score: 89.0 bits (219), Expect = 3.4e-17
Identity = 44/91 (48.35%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 5   GSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDLFQDH 64
           G++  LT  D+L+YLK V++ FQ+ +EKYE FL +++DFKAQR+DT  + A V DLF+ +
Sbjct: 36  GTTGGLTTVDALTYLKAVKDMFQDNKEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGY 95

Query: 65  PHLILGFNIFLPKNCEIILAPQDQEDDQDQD 96
             L+LGFN FLPK  +I L P+D++  +  D
Sbjct: 96  DDLLLGFNTFLPKGYKITLQPEDEKPKKPVD 126

[Close]

BLAST of Bhi12G000467 vs. ExPASy Swiss-Prot
Match: Q9LFQ3 (Paired amphipathic helix protein Sin3-like 2 OS=Arabidopsis thaliana OX=3702 GN=SNL2 PE=1 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 2.2e-16
Identity = 40/78 (51.28%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 6   SSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDLFQDHP 65
           ++Q LT  D+L+YLK V+E FQ++R+KY+ FL +++DFKAQ+ DT+ + + V +LF+ H 
Sbjct: 44  NTQKLTTDDALTYLKEVKEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGHN 103

Query: 66  HLILGFNIFLPKNCEIIL 84
           +LI GFN FLPK  EI L
Sbjct: 104 NLIFGFNTFLPKGFEITL 121

[Close]

BLAST of Bhi12G000467 vs. NCBI nr
Match: CAA2958731.1 (paired amphipathic helix Sin3-like 2 isoform X1 [Olea europaea subsp. europaea])

HSP 1 Score: 104.4 bits (259), Expect = 6.0e-19
Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 5   GSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDLFQDH 64
           GS+Q LT  D+LSYLK V++ FQ+EREKY+RFL +++DFK QRIDTA + A V +LF+ H
Sbjct: 78  GSTQKLTTNDALSYLKEVKDMFQDEREKYDRFLDVMKDFKGQRIDTAGVIARVKELFKGH 137

Query: 65  PHLILGFNIFLPKNCEIILAPQDQ 89
           P+LILGFN FLPK  EI L  +++
Sbjct: 138 PNLILGFNTFLPKGYEITLTDEEE 161

[Close]

BLAST of Bhi12G000467 vs. NCBI nr
Match: CAA2958732.1 (paired amphipathic helix Sin3-like 2 isoform X1 [Olea europaea subsp. europaea])

HSP 1 Score: 104.4 bits (259), Expect = 6.0e-19
Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 5   GSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDLFQDH 64
           GS+Q LT  D+LSYLK V++ FQ+EREKY+RFL +++DFK QRIDTA + A V +LF+ H
Sbjct: 64  GSTQKLTTNDALSYLKEVKDMFQDEREKYDRFLDVMKDFKGQRIDTAGVIARVKELFKGH 123

Query: 65  PHLILGFNIFLPKNCEIILAPQDQ 89
           P+LILGFN FLPK  EI L  +++
Sbjct: 124 PNLILGFNTFLPKGYEITLTDEEE 147

[Close]

BLAST of Bhi12G000467 vs. NCBI nr
Match: CAA2958734.1 (paired amphipathic helix Sin3-like 2 isoform X2 [Olea europaea subsp. europaea])

HSP 1 Score: 104.4 bits (259), Expect = 6.0e-19
Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 5   GSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDLFQDH 64
           GS+Q LT  D+LSYLK V++ FQ+EREKY+RFL +++DFK QRIDTA + A V +LF+ H
Sbjct: 64  GSTQKLTTNDALSYLKEVKDMFQDEREKYDRFLDVMKDFKGQRIDTAGVIARVKELFKGH 123

Query: 65  PHLILGFNIFLPKNCEIILAPQDQ 89
           P+LILGFN FLPK  EI L  +++
Sbjct: 124 PNLILGFNTFLPKGYEITLTDEEE 147

[Close]

BLAST of Bhi12G000467 vs. NCBI nr
Match: CAA2958733.1 (paired amphipathic helix Sin3-like 2 isoform X1 [Olea europaea subsp. europaea])

HSP 1 Score: 104.4 bits (259), Expect = 6.0e-19
Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 5   GSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDLFQDH 64
           GS+Q LT  D+LSYLK V++ FQ+EREKY+RFL +++DFK QRIDTA + A V +LF+ H
Sbjct: 64  GSTQKLTTNDALSYLKEVKDMFQDEREKYDRFLDVMKDFKGQRIDTAGVIARVKELFKGH 123

Query: 65  PHLILGFNIFLPKNCEIILAPQDQ 89
           P+LILGFN FLPK  EI L  +++
Sbjct: 124 PNLILGFNTFLPKGYEITLTDEEE 147

[Close]

BLAST of Bhi12G000467 vs. NCBI nr
Match: XP_022151192.1 (paired amphipathic helix protein Sin3-like 4 isoform X2 [Momordica charantia])

HSP 1 Score: 104.0 bits (258), Expect = 7.8e-19
Identity = 58/101 (57.43%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 1   MAEEGSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDL 60
           MA  GS+Q LT  D+L YLKRV++ FQ++REKYE FL +++DFKAQRIDTA + A V DL
Sbjct: 31  MAGGGSAQKLTTNDALVYLKRVKDIFQDKREKYEDFLEVMKDFKAQRIDTAGVIARVKDL 90

Query: 61  FQDHPHLILGFNIFLPKNCEIILAPQDQEDDQDQDPPPQNK 102
           F+ H  LILGFN FLPK  EI L  +D       D PPQ K
Sbjct: 91  FKGHRDLILGFNTFLPKGYEITLPLED-------DQPPQKK 124

[Close]

BLAST of Bhi12G000467 vs. ExPASy TrEMBL
Match: A0A6J1DDV1 (paired amphipathic helix protein Sin3-like 4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019172 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.8e-19
Identity = 58/101 (57.43%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 1   MAEEGSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDL 60
           MA  GS+Q LT  D+L YLKRV++ FQ++REKYE FL +++DFKAQRIDTA + A V DL
Sbjct: 31  MAGGGSAQKLTTNDALVYLKRVKDIFQDKREKYEDFLEVMKDFKAQRIDTAGVIARVKDL 90

Query: 61  FQDHPHLILGFNIFLPKNCEIILAPQDQEDDQDQDPPPQNK 102
           F+ H  LILGFN FLPK  EI L  +D       D PPQ K
Sbjct: 91  FKGHRDLILGFNTFLPKGYEITLPLED-------DQPPQKK 124

[Close]

BLAST of Bhi12G000467 vs. ExPASy TrEMBL
Match: A0A6J1DCT7 (paired amphipathic helix protein Sin3-like 4 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019172 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.8e-19
Identity = 58/101 (57.43%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 1   MAEEGSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDL 60
           MA  GS+Q LT  D+L YLKRV++ FQ++REKYE FL +++DFKAQRIDTA + A V DL
Sbjct: 31  MAGGGSAQKLTTNDALVYLKRVKDIFQDKREKYEDFLEVMKDFKAQRIDTAGVIARVKDL 90

Query: 61  FQDHPHLILGFNIFLPKNCEIILAPQDQEDDQDQDPPPQNK 102
           F+ H  LILGFN FLPK  EI L  +D       D PPQ K
Sbjct: 91  FKGHRDLILGFNTFLPKGYEITLPLED-------DQPPQKK 124

[Close]

BLAST of Bhi12G000467 vs. ExPASy TrEMBL
Match: A0A6J1DBI6 (paired amphipathic helix protein Sin3-like 4 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111019172 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.8e-19
Identity = 58/101 (57.43%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 1   MAEEGSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDL 60
           MA  GS+Q LT  D+L YLKRV++ FQ++REKYE FL +++DFKAQRIDTA + A V DL
Sbjct: 1   MAGGGSAQKLTTNDALVYLKRVKDIFQDKREKYEDFLEVMKDFKAQRIDTAGVIARVKDL 60

Query: 61  FQDHPHLILGFNIFLPKNCEIILAPQDQEDDQDQDPPPQNK 102
           F+ H  LILGFN FLPK  EI L  +D       D PPQ K
Sbjct: 61  FKGHRDLILGFNTFLPKGYEITLPLED-------DQPPQKK 94

[Close]

BLAST of Bhi12G000467 vs. ExPASy TrEMBL
Match: A0A6I9UIE8 (paired amphipathic helix protein Sin3-like 2 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105177188 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.8e-19
Identity = 52/93 (55.91%), Postives = 72/93 (77.42%), Query Frame = 0


Query: 5   GSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDLFQDH 64
           GS+Q LT  D+LSYLK+V++ FQ++REKY+RFL +++DFKAQR+DTA + A V +LF+ H
Sbjct: 73  GSTQKLTTNDALSYLKQVKDMFQDQREKYDRFLDVMKDFKAQRVDTAGVIARVKELFKGH 132

Query: 65  PHLILGFNIFLPKNCEIILAPQDQEDDQDQDPP 98
           P+LILGFN FLPK  EI L+      D+++ PP
Sbjct: 133 PNLILGFNTFLPKGYEITLS------DEEEAPP 159

[Close]

BLAST of Bhi12G000467 vs. ExPASy TrEMBL
Match: A0A6I9UUD7 (paired amphipathic helix protein Sin3-like 2 isoform X2 OS=Sesamum indicum OX=4182 GN=LOC105177188 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.8e-19
Identity = 52/93 (55.91%), Postives = 72/93 (77.42%), Query Frame = 0


Query: 5   GSSQNLTPKDSLSYLKRVRETFQNEREKYERFLRLIQDFKAQRIDTAELFATVMDLFQDH 64
           GS+Q LT  D+LSYLK+V++ FQ++REKY+RFL +++DFKAQR+DTA + A V +LF+ H
Sbjct: 73  GSTQKLTTNDALSYLKQVKDMFQDQREKYDRFLDVMKDFKAQRVDTAGVIARVKELFKGH 132

Query: 65  PHLILGFNIFLPKNCEIILAPQDQEDDQDQDPP 98
           P+LILGFN FLPK  EI L+      D+++ PP
Sbjct: 133 PNLILGFNTFLPKGYEITLS------DEEEAPP 159

The following BLAST results are available for this feature:

BLAST of Bhi12G000467 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24190.1	4.4e-20	51.72	SIN3-like 3	[more]
AT1G24190.2	4.4e-20	51.72	SIN3-like 3	[more]
AT3G01320.1	4.4e-20	55.06	SIN3-like 1	[more]
AT3G01320.2	4.4e-20	55.06	SIN3-like 1	[more]
AT1G70060.1	1.1e-18	46.88	SIN3-like 4	[more]

BLAST of Bhi12G000467 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRH9	6.2e-19	55.06	Paired amphipathic helix protein Sin3-like 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O48686	6.2e-19	51.72	Paired amphipathic helix protein Sin3-like 3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O04539	1.5e-17	46.88	Paired amphipathic helix protein Sin3-like 4 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9XIE1	3.4e-17	48.35	Paired amphipathic helix protein Sin3-like 5 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9LFQ3	2.2e-16	51.28	Paired amphipathic helix protein Sin3-like 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of Bhi12G000467 vs. NCBI nr


Match Name	E-value	Identity	Description
CAA2958731.1	6.0e-19	59.52	paired amphipathic helix Sin3-like 2 isoform X1 [Olea europaea subsp. europaea]	[more]
CAA2958732.1	6.0e-19	59.52	paired amphipathic helix Sin3-like 2 isoform X1 [Olea europaea subsp. europaea]	[more]
CAA2958734.1	6.0e-19	59.52	paired amphipathic helix Sin3-like 2 isoform X2 [Olea europaea subsp. europaea]	[more]
CAA2958733.1	6.0e-19	59.52	paired amphipathic helix Sin3-like 2 isoform X1 [Olea europaea subsp. europaea]	[more]
XP_022151192.1	7.8e-19	57.43	paired amphipathic helix protein Sin3-like 4 isoform X2 [Momordica charantia]	[more]

BLAST of Bhi12G000467 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDV1	3.8e-19	57.43	paired amphipathic helix protein Sin3-like 4 isoform X1 OS=Momordica charantia O...	[more]
A0A6J1DCT7	3.8e-19	57.43	paired amphipathic helix protein Sin3-like 4 isoform X2 OS=Momordica charantia O...	[more]
A0A6J1DBI6	3.8e-19	57.43	paired amphipathic helix protein Sin3-like 4 isoform X3 OS=Momordica charantia O...	[more]
A0A6I9UIE8	3.8e-19	55.91	paired amphipathic helix protein Sin3-like 2 isoform X1 OS=Sesamum indicum OX=41...	[more]
A0A6I9UUD7	3.8e-19	55.91	paired amphipathic helix protein Sin3-like 2 isoform X2 OS=Sesamum indicum OX=41...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003822	Paired amphipathic helix	PFAM	PF02671	PAH	coord: 31..75 e-value: 9.9E-15 score: 54.4
IPR003822	Paired amphipathic helix	PROSITE	PS51477	PAH	coord: 6..78 score: 16.539137
IPR036600	Paired amphipathic helix superfamily	GENE3D	1.20.1160.11	Paired amphipathic helix	coord: 14..76 e-value: 5.6E-21 score: 76.7
IPR036600	Paired amphipathic helix superfamily	SUPERFAMILY	47762	PAH2 domain	coord: 7..77
IPR039774	Transcriptional regulatory protein Sin3-like	PANTHER	PTHR12346	SIN3B-RELATED	coord: 5..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M000467	Bhi12M000467	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003714	transcription corepressor activity