Bhi12G000453 (gene) Wax gourd (B227) v1

Overview


Name	Bhi12G000453
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr12: 16084453 .. 16084610 (+)
RNA-Seq Expression	Bhi12G000453
Synteny	Bhi12G000453

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAAGGACAAGGTTTGTGGAATTGCCTTCGTCCATGTTCCAACGACTATAAGAGTTTGTCATGTTATGTGGATTGCGGTGCACAGAATAAAGGAACTGGATCTTGTATTCCTAAACGACCTGGTTCTGATGAATATGTTTGTTGTTGTACTGGTTGA

mRNA sequence

GTGAAGGACAAGGTTTGTGGAATTGCCTTCGTCCATGTTCCAACGACTATAAGAGTTTGTCATGTTATGTGGATTGCGGTGCACAGAATAAAGGAACTGGATCTTGTATTCCTAAACGACCTGGTTCTGATGAATATGTTTGTTGTTGTACTGGTTGA

Coding sequence (CDS)

GTGAAGGACAAGGTTTGTGGAATTGCCTTCGTCCATGTTCCAACGACTATAAGAGTTTGTCATGTTATGTGGATTGCGGTGCACAGAATAAAGGAACTGGATCTTGTATTCCTAAACGACCTGGTTCTGATGAATATGTTTGTTGTTGTACTGGTTGA

Protein sequence

EGQGLWNCLRPCSNDYKSLSCYVDCGAQNKGTGSCIPKRPGSDEYVCCCTG

Homology

[Close]

BLAST of Bhi12G000453 vs. NCBI nr
Match: KAA0043464.1 (hypothetical protein E6C27_scaffold1167G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 110.5 bits (275), Expect = 4.2e-21
Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 1  EGQGLWNCLRPCSNDYKSLSCYVDCGAQNKGTGSCIPKRPGSDEYVCCCTG 52
          EGQGLWNC+RPCS  YKSLSCYVDCGA NKGTG+CIPKRP SDEYVCCCTG
Sbjct: 25 EGQGLWNCIRPCSETYKSLSCYVDCGALNKGTGACIPKRPVSDEYVCCCTG 75

[Close]

BLAST of Bhi12G000453 vs. NCBI nr
Match: KAG6605731.1 (hypothetical protein SDJN03_03048, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 67.0 bits (162), Expect = 5.3e-08
Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 1  EGQGLWNCLRPCSNDYKSLSCYVDCGAQNKGTGSCIPKRPGS--DEYVCCC 50
          E QGLW+C+RPC+ D  +  C +DC  +++GTGSCIPKR G+   E +CCC
Sbjct: 25 EVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCCC 75

[Close]

BLAST of Bhi12G000453 vs. NCBI nr
Match: KAG7035638.1 (hypothetical protein SDJN02_02436, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 67.0 bits (162), Expect = 5.3e-08
Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 1  EGQGLWNCLRPCSNDYKSLSCYVDCGAQNKGTGSCIPKRPGS--DEYVCCC 50
          E QGLW+C+RPC+ D  +  C +DC  +++GTGSCIPKR G+   E +CCC
Sbjct: 37 EVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCIPKRDGTGGGELLCCC 87

[Close]

BLAST of Bhi12G000453 vs. NCBI nr
Match: KGN54497.1 (hypothetical protein Csa_012842 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-06
Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 1  EGQGLWNCLRPCSNDYKSLSCYVDCGAQNKGTGSCIPKRPG-SDEYVCCC 50
          EG  LWNC+ PCSN+   + C   C  Q++G G C+PK PG SD  VCCC
Sbjct: 25 EGDDLWNCVIPCSNNNGDILCNTACIEQDEGAGFCVPKLPGISDMKVCCC 74

[Close]

BLAST of Bhi12G000453 vs. ExPASy TrEMBL
Match: A0A5A7TJH1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00010 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.0e-21
Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 1  EGQGLWNCLRPCSNDYKSLSCYVDCGAQNKGTGSCIPKRPGSDEYVCCCTG 52
          EGQGLWNC+RPCS  YKSLSCYVDCGA NKGTG+CIPKRP SDEYVCCCTG
Sbjct: 25 EGQGLWNCIRPCSETYKSLSCYVDCGALNKGTGACIPKRPVSDEYVCCCTG 75

[Close]

BLAST of Bhi12G000453 vs. ExPASy TrEMBL
Match: A0A0A0L1R8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.4e-07
Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 1  EGQGLWNCLRPCSNDYKSLSCYVDCGAQNKGTGSCIPKRPG-SDEYVCCC 50
          EG  LWNC+ PCSN+   + C   C  Q++G G C+PK PG SD  VCCC
Sbjct: 25 EGDDLWNCVIPCSNNNGDILCNTACIEQDEGAGFCVPKLPGISDMKVCCC 74

The following BLAST results are available for this feature:

BLAST of Bhi12G000453 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12G000453 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi12G000453 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043464.1	4.2e-21	88.24	hypothetical protein E6C27_scaffold1167G00010 [Cucumis melo var. makuwa]	[more]
KAG6605731.1	5.3e-08	52.94	hypothetical protein SDJN03_03048, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7035638.1	5.3e-08	52.94	hypothetical protein SDJN02_02436, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KGN54497.1	1.3e-06	52.00	hypothetical protein Csa_012842 [Cucumis sativus]	[more]

BLAST of Bhi12G000453 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TJH1	2.0e-21	88.24	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0L1R8	6.4e-07	52.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M000453	Bhi12M000453	mRNA