Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAAGAGGGAAGCGTGGGTGAGGGACAACCAAAACATTAATTTGGATGTATATGTACATCAACATGGGCGGATCCCAATTACCATTTATGAGGATGTTGGAAAACCAGTAAGCGTCTTTGCTACAAAGTTTAGCAACACCATTGGAACCGCGACCCAGGACACAATTTCATTGCATTGTTCTAAGTGGAATGATTTATCTAGTGATGTCATTGCCACTATAAAGGCTCGTTTACGGGTAAGTTTTATGCTTTTATTGTATTGATCTCATATGTGTACTTACCATAACTTTTATTGAAAATGCAGACACATTTTATTGCGGATCTATCCTCGAATTTCGTCAATAAGTGCATAAATCGGCAAATACAAAACTTATTTAAAGAATATAGATCAGAACTGCATAAGAACTATTGTAGCTTTGAGAATCCTGTACTTGCTCATGAAAGCCCACCAGACAAGTTAACAAATAAAGAAGATTGGAAGATTCTTTGTGATCGATGGGAGACTCATGAATGGTAG
mRNA sequence
AACAAGAGGGAAGCGTGGGTGAGGGACAACCAAAACATTAATTTGGATGTATATGTACATCAACATGGGCGGATCCCAATTACCATTTATGAGGATGTTGGAAAACCAGTAAGCGTCTTTGCTACAAAGTTTAGCAACACCATTGGAACCGCGACCCAGGACACAATTTCATTGCATTGTTCTAAGTGGAATGATTTATCTAGTGATGTCATTGCCACTATAAAGGCTCGTTTACGGACACATTTTATTGCGGATCTATCCTCGAATTTCGTCAATAAGTGCATAAATCGGCAAATACAAAACTTATTTAAAGAATATAGATCAGAACTGCATAAGAACTATTGTAGCTTTGAGAATCCTGTACTTGCTCATGAAAGCCCACCAGACAAGTTAACAAATAAAGAAGATTGGAAGATTCTTTGTGATCGATGGGAGACTCATGAATGGTAG
Coding sequence (CDS)
AACAAGAGGGAAGCGTGGGTGAGGGACAACCAAAACATTAATTTGGATGTATATGTACATCAACATGGGCGGATCCCAATTACCATTTATGAGGATGTTGGAAAACCAGTAAGCGTCTTTGCTACAAAGTTTAGCAACACCATTGGAACCGCGACCCAGGACACAATTTCATTGCATTGTTCTAAGTGGAATGATTTATCTAGTGATGTCATTGCCACTATAAAGGCTCGTTTACGGACACATTTTATTGCGGATCTATCCTCGAATTTCGTCAATAAGTGCATAAATCGGCAAATACAAAACTTATTTAAAGAATATAGATCAGAACTGCATAAGAACTATTGTAGCTTTGAGAATCCTGTACTTGCTCATGAAAGCCCACCAGACAAGTTAACAAATAAAGAAGATTGGAAGATTCTTTGTGATCGATGGGAGACTCATGAATGGTAG
Protein sequence
NKREAWVRDNQNINLDVYVHQHGRIPITIYEDVGKPVSVFATKFSNTIGTATQDTISLHCSKWNDLSSDVIATIKARLRTHFIADLSSNFVNKCINRQIQNLFKEYRSELHKNYCSFENPVLAHESPPDKLTNKEDWKILCDRWETHEW
Homology
BLAST of Bhi12G000387 vs. NCBI nr
Match:
XP_038887409.1 (poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida])
HSP 1 Score: 139.4 bits (350), Expect = 2.5e-29
Identity = 65/140 (46.43%), Postives = 95/140 (67.86%), Query Frame = 0
Query: 10 NQNINLDVYVHQHGRIPITIYEDVGKPVSVFATKFSNTIGTATQDTISLHCSKWNDLSSD 69
++N+ LD +V+ HGRI I I E+VGKPV ATKFSN IGT ++TI L C W+D+S +
Sbjct: 574 SRNLELDRHVNIHGRIRIEIDEEVGKPVCANATKFSNAIGTIARNTIPLRCKDWSDVSKE 633
Query: 70 VIATIKARLRTHFIADLSSNFVNKCINRQIQNLFKEYRSELHKNYCSFENPVLAHESPPD 129
V + +L ++F D+ V K + +++QN FKEYRS+L+K+Y F++P A PP
Sbjct: 634 VRDLVVDQLLSYFDFDVGKKHVKKYVLQRVQNTFKEYRSDLYKHYRRFKDPKEARACPPK 693
Query: 130 KLTNKEDWKILCDRWETHEW 150
++T+ DW +LC+RWET EW
Sbjct: 694 RITDATDWNLLCNRWETPEW 713
BLAST of Bhi12G000387 vs. NCBI nr
Match:
KAA0032076.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 137.1 bits (344), Expect = 1.2e-28
Identity = 67/149 (44.97%), Postives = 97/149 (65.10%), Query Frame = 0
Query: 2 KREAWVRD-NQNINLDVYVHQHGRIPITIYEDVGKPVSVFATKFSNTIGTATQDTISLHC 61
KRE VR +NI LD +V +HG++ I I E+ GKPV+ FA K + IGTA ++TI L C
Sbjct: 182 KRERGVRGYGRNIELDKFVKKHGKVKIEINEEEGKPVTTFAPKIALGIGTAVRNTILLSC 241
Query: 62 SKWNDLSSDVIATIKARLRTHFIADLSSNFVNKCINRQIQNLFKEYRSELHKNYCSFENP 121
W + DV + R THF D ++ V K ++ ++QN+F+E+R+ LHK YC F++
Sbjct: 242 ENWKAIPMDVKELMIDRSETHFEFDPTTMIVRKYLDEKMQNIFREFRAGLHKYYCKFDDF 301
Query: 122 VLAHESPPDKLTNKEDWKILCDRWETHEW 150
+ A +PPDK+T+ EDW ++CDRWET W
Sbjct: 302 IEARANPPDKITH-EDWNMMCDRWETDAW 329
BLAST of Bhi12G000387 vs. NCBI nr
Match:
TYK00374.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 134.0 bits (336), Expect = 1.0e-27
Identity = 71/147 (48.30%), Postives = 89/147 (60.54%), Query Frame = 0
Query: 2 KREAWVRDNQNINLDVYVHQHGRIPITIYEDVGKPVSVFATKFSNTIGTATQDTISLHCS 61
K++ W ++NIN+D+YV +H +I ITI+E VGK V VFATKFSN IGTAT+DTIS+HCS
Sbjct: 35 KKKCWHWHSRNINVDMYVQRHEKILITIHEKVGKLVGVFATKFSNAIGTATRDTISVHCS 94
Query: 62 KWNDLSSDVIATIKARLRTHFIADLSSNFVNKCINRQIQNLFKEYRSELHKNYCSFENPV 121
KW D+SSDVI TIKARL+ +F+ +SS F+N
Sbjct: 95 KWKDVSSDVIVTIKARLQPYFVVCMSSMFIN----------------------------- 144
Query: 122 LAHESPPDKLTNKEDWKILCDRWETHE 149
KL NKEDW+ LCD WET E
Sbjct: 155 --------KLLNKEDWEALCDCWETPE 144
BLAST of Bhi12G000387 vs. NCBI nr
Match:
KAA0025491.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 134.0 bits (336), Expect = 1.0e-27
Identity = 71/147 (48.30%), Postives = 89/147 (60.54%), Query Frame = 0
Query: 2 KREAWVRDNQNINLDVYVHQHGRIPITIYEDVGKPVSVFATKFSNTIGTATQDTISLHCS 61
K++ W ++NIN+D+YV +H +I ITI+E VGK V VFATKFSN IGTAT+DTIS+HCS
Sbjct: 34 KKKCWHWHSRNINVDMYVQRHEKILITIHEKVGKLVGVFATKFSNAIGTATRDTISVHCS 93
Query: 62 KWNDLSSDVIATIKARLRTHFIADLSSNFVNKCINRQIQNLFKEYRSELHKNYCSFENPV 121
KW D+SSDVI TIKARL+ +F+ +SS F+N
Sbjct: 94 KWKDVSSDVIVTIKARLQPYFVVCMSSMFIN----------------------------- 143
Query: 122 LAHESPPDKLTNKEDWKILCDRWETHE 149
KL NKEDW+ LCD WET E
Sbjct: 154 --------KLLNKEDWEALCDCWETPE 143
BLAST of Bhi12G000387 vs. NCBI nr
Match:
KAA0040145.1 (transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa])
HSP 1 Score: 133.3 bits (334), Expect = 1.8e-27
Identity = 66/149 (44.30%), Postives = 95/149 (63.76%), Query Frame = 0
Query: 2 KREAWVRD-NQNINLDVYVHQHGRIPITIYEDVGKPVSVFATKFSNTIGTATQDTISLHC 61
KR VR +NI LD +V +HG+I I I E+ GKPV+ FA K + IGTA ++TI L C
Sbjct: 671 KRGRGVRGYGRNIELDKFVEKHGKIKIEINEEEGKPVTTFAPKIALGIGTALRNTIPLSC 730
Query: 62 SKWNDLSSDVIATIKARLRTHFIADLSSNFVNKCINRQIQNLFKEYRSELHKNYCSFENP 121
W + V + RL THF D ++ V K + ++QN+F+E+R++LHK YC F++
Sbjct: 731 ENWKAVPMGVRELVIDRLETHFEFDPTNMVVRKYLEEKMQNIFREFRADLHKYYCQFDDS 790
Query: 122 VLAHESPPDKLTNKEDWKILCDRWETHEW 150
V A +PP+++T EDW ++CDRWET W
Sbjct: 791 VEARANPPNRIT-YEDWNMMCDRWETDAW 818
BLAST of Bhi12G000387 vs. ExPASy TrEMBL
Match:
A0A5A7SPZ3 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00450 PE=4 SV=1)
HSP 1 Score: 137.1 bits (344), Expect = 5.9e-29
Identity = 67/149 (44.97%), Postives = 97/149 (65.10%), Query Frame = 0
Query: 2 KREAWVRD-NQNINLDVYVHQHGRIPITIYEDVGKPVSVFATKFSNTIGTATQDTISLHC 61
KRE VR +NI LD +V +HG++ I I E+ GKPV+ FA K + IGTA ++TI L C
Sbjct: 182 KRERGVRGYGRNIELDKFVKKHGKVKIEINEEEGKPVTTFAPKIALGIGTAVRNTILLSC 241
Query: 62 SKWNDLSSDVIATIKARLRTHFIADLSSNFVNKCINRQIQNLFKEYRSELHKNYCSFENP 121
W + DV + R THF D ++ V K ++ ++QN+F+E+R+ LHK YC F++
Sbjct: 242 ENWKAIPMDVKELMIDRSETHFEFDPTTMIVRKYLDEKMQNIFREFRAGLHKYYCKFDDF 301
Query: 122 VLAHESPPDKLTNKEDWKILCDRWETHEW 150
+ A +PPDK+T+ EDW ++CDRWET W
Sbjct: 302 IEARANPPDKITH-EDWNMMCDRWETDAW 329
BLAST of Bhi12G000387 vs. ExPASy TrEMBL
Match:
A0A5A7SMM8 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00980 PE=4 SV=1)
HSP 1 Score: 134.0 bits (336), Expect = 5.0e-28
Identity = 71/147 (48.30%), Postives = 89/147 (60.54%), Query Frame = 0
Query: 2 KREAWVRDNQNINLDVYVHQHGRIPITIYEDVGKPVSVFATKFSNTIGTATQDTISLHCS 61
K++ W ++NIN+D+YV +H +I ITI+E VGK V VFATKFSN IGTAT+DTIS+HCS
Sbjct: 34 KKKCWHWHSRNINVDMYVQRHEKILITIHEKVGKLVGVFATKFSNAIGTATRDTISVHCS 93
Query: 62 KWNDLSSDVIATIKARLRTHFIADLSSNFVNKCINRQIQNLFKEYRSELHKNYCSFENPV 121
KW D+SSDVI TIKARL+ +F+ +SS F+N
Sbjct: 94 KWKDVSSDVIVTIKARLQPYFVVCMSSMFIN----------------------------- 143
Query: 122 LAHESPPDKLTNKEDWKILCDRWETHE 149
KL NKEDW+ LCD WET E
Sbjct: 154 --------KLLNKEDWEALCDCWETPE 143
BLAST of Bhi12G000387 vs. ExPASy TrEMBL
Match:
A0A5D3BM75 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00400 PE=4 SV=1)
HSP 1 Score: 134.0 bits (336), Expect = 5.0e-28
Identity = 71/147 (48.30%), Postives = 89/147 (60.54%), Query Frame = 0
Query: 2 KREAWVRDNQNINLDVYVHQHGRIPITIYEDVGKPVSVFATKFSNTIGTATQDTISLHCS 61
K++ W ++NIN+D+YV +H +I ITI+E VGK V VFATKFSN IGTAT+DTIS+HCS
Sbjct: 35 KKKCWHWHSRNINVDMYVQRHEKILITIHEKVGKLVGVFATKFSNAIGTATRDTISVHCS 94
Query: 62 KWNDLSSDVIATIKARLRTHFIADLSSNFVNKCINRQIQNLFKEYRSELHKNYCSFENPV 121
KW D+SSDVI TIKARL+ +F+ +SS F+N
Sbjct: 95 KWKDVSSDVIVTIKARLQPYFVVCMSSMFIN----------------------------- 144
Query: 122 LAHESPPDKLTNKEDWKILCDRWETHE 149
KL NKEDW+ LCD WET E
Sbjct: 155 --------KLLNKEDWEALCDCWETPE 144
BLAST of Bhi12G000387 vs. ExPASy TrEMBL
Match:
A0A5A7TFG0 (Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold768G00210 PE=4 SV=1)
HSP 1 Score: 133.3 bits (334), Expect = 8.6e-28
Identity = 66/149 (44.30%), Postives = 95/149 (63.76%), Query Frame = 0
Query: 2 KREAWVRD-NQNINLDVYVHQHGRIPITIYEDVGKPVSVFATKFSNTIGTATQDTISLHC 61
KR VR +NI LD +V +HG+I I I E+ GKPV+ FA K + IGTA ++TI L C
Sbjct: 671 KRGRGVRGYGRNIELDKFVEKHGKIKIEINEEEGKPVTTFAPKIALGIGTALRNTIPLSC 730
Query: 62 SKWNDLSSDVIATIKARLRTHFIADLSSNFVNKCINRQIQNLFKEYRSELHKNYCSFENP 121
W + V + RL THF D ++ V K + ++QN+F+E+R++LHK YC F++
Sbjct: 731 ENWKAVPMGVRELVIDRLETHFEFDPTNMVVRKYLEEKMQNIFREFRADLHKYYCQFDDS 790
Query: 122 VLAHESPPDKLTNKEDWKILCDRWETHEW 150
V A +PP+++T EDW ++CDRWET W
Sbjct: 791 VEARANPPNRIT-YEDWNMMCDRWETDAW 818
BLAST of Bhi12G000387 vs. ExPASy TrEMBL
Match:
A0A5D3CNU5 (Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00230 PE=4 SV=1)
HSP 1 Score: 129.8 bits (325), Expect = 9.5e-27
Identity = 60/139 (43.17%), Postives = 90/139 (64.75%), Query Frame = 0
Query: 11 QNINLDVYVHQHGRIPITIYEDVGKPVSVFATKFSNTIGTATQDTISLHCSKWNDLSSDV 70
+NI LD +V +HG++ I I E+ GKPV+ FA K + IGTA ++TI L C W + DV
Sbjct: 254 RNIELDKFVKKHGKVKIEINEEEGKPVTTFAPKIALGIGTAVRNTILLSCENWKAVPMDV 313
Query: 71 IATIKARLRTHFIADLSSNFVNKCINRQIQNLFKEYRSELHKNYCSFENPVLAHESPPDK 130
+ R THF D ++ V K + ++QN+F+++R+ LHK YC F++ + A +PPD+
Sbjct: 314 KELVIDRSETHFEFDPTTMIVRKYLEEKMQNIFRKFRAGLHKYYCKFDDFIEARANPPDR 373
Query: 131 LTNKEDWKILCDRWETHEW 150
+T EDW ++CDRWET W
Sbjct: 374 IT-YEDWNMMCDRWETDAW 391
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_038887409.1 | 2.5e-29 | 46.43 | poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida] | [more] |
KAA0032076.1 | 1.2e-28 | 44.97 | transposase [Cucumis melo var. makuwa] | [more] |
TYK00374.1 | 1.0e-27 | 48.30 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] | [more] |
KAA0025491.1 | 1.0e-27 | 48.30 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] | [more] |
KAA0040145.1 | 1.8e-27 | 44.30 | transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7SPZ3 | 5.9e-29 | 44.97 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00450 PE... | [more] |
A0A5A7SMM8 | 5.0e-28 | 48.30 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
A0A5D3BM75 | 5.0e-28 | 48.30 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
A0A5A7TFG0 | 8.6e-28 | 44.30 | Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuw... | [more] |
A0A5D3CNU5 | 9.5e-27 | 43.17 | Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuw... | [more] |