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Bhi12G000052 (gene) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTCTCTTGCTGGAGCAGGATCACATGCTAGTTTTACTTCAGTTCTCAATACAGTCGTCAAGCAGTTATCAGACCATGACGAAACTCAAGAGGATGCAAATTCTTCCGCATCCGTAAATAATGTAGTCAAAGATGATGAAGATGATTATGACCCCTTCGCCGATTACGACATCAATGACCCATTTTTAGGCAAAAATGATGGAGATAGTATGTTCCTAAAGTGGATTAACCACCCACCGACCACAACGGTTAGCTGA ATGAGTTCTCTTGCTGGAGCAGGATCACATGCTAGTTTTACTTCAGTTCTCAATACAGTCGTCAAGCAGTTATCAGACCATGACGAAACTCAAGAGGATGCAAATTCTTCCGCATCCGTAAATAATGTAGTCAAAGATGATGAAGATGATTATGACCCCTTCGCCGATTACGACATCAATGACCCATTTTTAGGCAAAAATGATGGAGATAGTATGTTCCTAAAGTGGATTAACCACCCACCGACCACAACGGTTAGCTGA ATGAGTTCTCTTGCTGGAGCAGGATCACATGCTAGTTTTACTTCAGTTCTCAATACAGTCGTCAAGCAGTTATCAGACCATGACGAAACTCAAGAGGATGCAAATTCTTCCGCATCCGTAAATAATGTAGTCAAAGATGATGAAGATGATTATGACCCCTTCGCCGATTACGACATCAATGACCCATTTTTAGGCAAAAATGATGGAGATAGTATGTTCCTAAAGTGGATTAACCACCCACCGACCACAACGGTTAGCTGA MSSLAGAGSHASFTSVLNTVVKQLSDHDETQEDANSSASVNNVVKDDEDDYDPFADYDINDPFLGKNDGDSMFLKWINHPPTTTVS Homology
BLAST of Bhi12G000052 vs. NCBI nr
Match: KAA0060292.1 (hypothetical protein E6C27_scaffold22G00670 [Cucumis melo var. makuwa] >TYK22042.1 hypothetical protein E5676_scaffold318G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 73.6 bits (179), Expect = 9.6e-10 Identity = 39/65 (60.00%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of Bhi12G000052 vs. NCBI nr
Match: KAA0056777.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa] >KAA0059218.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYJ97600.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK21092.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]) HSP 1 Score: 55.1 bits (131), Expect = 3.5e-04 Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 0
BLAST of Bhi12G000052 vs. NCBI nr
Match: KAA0068172.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa]) HSP 1 Score: 54.7 bits (130), Expect = 4.6e-04 Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 0
BLAST of Bhi12G000052 vs. NCBI nr
Match: KAA0032923.1 (polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 54.3 bits (129), Expect = 6.0e-04 Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of Bhi12G000052 vs. NCBI nr
Match: TYK28077.1 (polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 53.9 bits (128), Expect = 7.9e-04 Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of Bhi12G000052 vs. ExPASy TrEMBL
Match: A0A5A7UWR6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00160 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.7e-10 Identity = 39/65 (60.00%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of Bhi12G000052 vs. ExPASy TrEMBL
Match: A0A5A7UVN1 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00580 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.7e-04 Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 0
BLAST of Bhi12G000052 vs. ExPASy TrEMBL
Match: A0A5A7VIK9 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001410 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.2e-04 Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 0
BLAST of Bhi12G000052 vs. ExPASy TrEMBL
Match: A0A5A7SR64 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001720 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.9e-04 Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of Bhi12G000052 vs. ExPASy TrEMBL
Match: A0A5A7VF67 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G004240 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.8e-04 Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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