Bhi12G000037 (gene) Wax gourd (B227) v1

Overview


Name	Bhi12G000037
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr12: 1375606 .. 1377262 (-)
RNA-Seq Expression	Bhi12G000037
Synteny	Bhi12G000037

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATACGAAAACATGAGTTCCATTGAATTTCTTGTTTTCAAGCTTCAGATTACCTACCAGATAGACGAGATTTTGGTTATTTACCCTTCCAAAAAAACAAACTAACCAGTTGCATCAAAATACACCCTTGCTCATTTATAAGTCTCATTCATCTAATGCAATTCACTCAATTCCTTTCTTTCAGAACTGGAGAGAGAGAGAGAAAATGCGGCCAACTCCTTTAGACGCCGACGACACCGTCGCCTTCCAACCGCCGCCATCGCCTCCGTGCCACGACCTCCGCGCCTGTACTTGGAGGCCGTACTCCAATTCCAGAGACTTCGAAGCCAACGCCGCCGTCGTCGTCATCATCCTCCTCTGTGGCCTCATCTGCGCTCTTGCTCTCAACACCGCGATCCGCTGCTTCCTCCGCCGTCGCGGCAGTGCCGATGATGATCCGAGTGACAGCCGGCAGGAGGAACTTCAGGACGAGACGAAGCCGACGCTAGTGGACAAATTGAAGATGGCTCCGGCGCTGGTGTTCTCGGCGGAGACCAAGCCGAAGCTCGCCGGTGCTGAGGCAGAGTGTACGATTTGCTTGACAGAGTTCTTGGAAGGGGAAGAGATTCGAGTGTTGGCGATTTGTAAGCACGGATTTCATGTTCAGTGTATTCAAACGTGGTTAATTTTGCATTCTTCTTGTCCGACTTGCCGCCGTAGCTACCTCCCTCCCTCGCCGCCGTCCTCTGTGAGCGGCGGCGACGGCGACGGCAATCCCTGAGATTAGATTAGAAATACCGGAATTCCTTGCGATAGCCGCCGTCGTAGCTGTTTGATAACAGCTCGAATTGAGCATTTGTTTTTCTTTTTTTTTTTTTAATTACAATTTACAATTACCTCTTCCTCTATCATTTTTTCCCCTTCTCTTGAATTTTTTCGATCAACTAAAAAACCAATTGCATTAACGGAGTTTGTAAATTCGTTAATGCAATATTCGGGTTGAGAAATGACGTTTTAAGTTGGTAATTTATCTCTATTTAATCTCTAATTTTCTTTAAAAAAATGTAAATAAATTATACCTTGTTTTTATTTTTAGAAATACACATGTGCAAATACGGTAGATGAGATTCAAAGCTTCTTCTTTTTCCTTTTCCAATGGGAAGGAAATTCGATGTATTGGGTTTGTTTTGGCAAGAGGTATAATTTTGATGCAAGTTCCAAAATTTTCGATTCCCACTAGAAATTGAAATGCTTTACCCACTAAATGAGCTCTTTTCAACTTAAAAAAAATATATATATGTGTGTGCGTGTGTGAAAAATCTAACTGATATTTATCCATCATTTGAAAATATTTTTATAATTTTATTTAATGATAAAAAATTGACGAAATTGAATTGAACCGTCAGTGTTTTACTATTTAAAAACAATTACCGTAGCATTTTATATGTCAACTTATTTTCTCATGTCTCTGTCAACAAAATTTTATATTTTATAGTATATCACATTCACTACCACAAAGCACAAGGATAAAGTTTAAGAAGTGGTTCTGAATTTTCATGTTTGCTTATGTCCATAAATTTCTCTATCTTTTGATTTTGTGTATAATAGGTTACTTGTTTAATTGATCTATCTAATATTTTAATAGTTGCACCAAATAAATAGAAAATTTTAAGATTGAG

mRNA sequence

TATACGAAAACATGAGTTCCATTGAATTTCTTGTTTTCAAGCTTCAGATTACCTACCAGATAGACGAGATTTTGGTTATTTACCCTTCCAAAAAAACAAACTAACCAGTTGCATCAAAATACACCCTTGCTCATTTATAAGTCTCATTCATCTAATGCAATTCACTCAATTCCTTTCTTTCAGAACTGGAGAGAGAGAGAGAAAATGCGGCCAACTCCTTTAGACGCCGACGACACCGTCGCCTTCCAACCGCCGCCATCGCCTCCGTGCCACGACCTCCGCGCCTGTACTTGGAGGCCGTACTCCAATTCCAGAGACTTCGAAGCCAACGCCGCCGTCGTCGTCATCATCCTCCTCTGTGGCCTCATCTGCGCTCTTGCTCTCAACACCGCGATCCGCTGCTTCCTCCGCCGTCGCGGCAGTGCCGATGATGATCCGAGTGACAGCCGGCAGGAGGAACTTCAGGACGAGACGAAGCCGACGCTAGTGGACAAATTGAAGATGGCTCCGGCGCTGGTGTTCTCGGCGGAGACCAAGCCGAAGCTCGCCGGTGCTGAGGCAGAGTGTACGATTTGCTTGACAGAGTTCTTGGAAGGGGAAGAGATTCGAGTGTTGGCGATTTGTAAGCACGGATTTCATGTTCAGTGTATTCAAACGTGGTTAATTTTGCATTCTTCTTGTCCGACTTGCCGCCGTAGCTACCTCCCTCCCTCGCCGCCGTCCTCTGTGAGCGGCGGCGACGGCGACGGCAATCCCTGAGATTAGATTAGAAATACCGGAATTCCTTGCGATAGCCGCCGTCGTAGCTGTTTGATAACAGCTCGAATTGAGCATTTGTTTTTCTTTTTTTTTTTTTAATTACAATTTACAATTACCTCTTCCTCTATCATTTTTTCCCCTTCTCTTGAATTTTTTCGATCAACTAAAAAACCAATTGCATTAACGGAGTTTGTAAATTCGTTAATGCAATATTCGGGTTGAGAAATGACGTTTTAAGTTGGTAATTTATCTCTATTTAATCTCTAATTTTCTTTAAAAAAATGTAAATAAATTATACCTTGTTTTTATTTTTAGAAATACACATGTGCAAATACGGTAGATGAGATTCAAAGCTTCTTCTTTTTCCTTTTCCAATGGGAAGGAAATTCGATGTATTGGGTTTGTTTTGGCAAGAGGTATAATTTTGATGCAAGTTCCAAAATTTTCGATTCCCACTAGAAATTGAAATGCTTTACCCACTAAATGAGCTCTTTTCAACTTAAAAAAAATATATATATGTGTGTGCGTGTGTGAAAAATCTAACTGATATTTATCCATCATTTGAAAATATTTTTATAATTTTATTTAATGATAAAAAATTGACGAAATTGAATTGAACCGTCAGTGTTTTACTATTTAAAAACAATTACCGTAGCATTTTATATGTCAACTTATTTTCTCATGTCTCTGTCAACAAAATTTTATATTTTATAGTATATCACATTCACTACCACAAAGCACAAGGATAAAGTTTAAGAAGTGGTTCTGAATTTTCATGTTTGCTTATGTCCATAAATTTCTCTATCTTTTGATTTTGTGTATAATAGGTTACTTGTTTAATTGATCTATCTAATATTTTAATAGTTGCACCAAATAAATAGAAAATTTTAAGATTGAG

Coding sequence (CDS)

ATGCGGCCAACTCCTTTAGACGCCGACGACACCGTCGCCTTCCAACCGCCGCCATCGCCTCCGTGCCACGACCTCCGCGCCTGTACTTGGAGGCCGTACTCCAATTCCAGAGACTTCGAAGCCAACGCCGCCGTCGTCGTCATCATCCTCCTCTGTGGCCTCATCTGCGCTCTTGCTCTCAACACCGCGATCCGCTGCTTCCTCCGCCGTCGCGGCAGTGCCGATGATGATCCGAGTGACAGCCGGCAGGAGGAACTTCAGGACGAGACGAAGCCGACGCTAGTGGACAAATTGAAGATGGCTCCGGCGCTGGTGTTCTCGGCGGAGACCAAGCCGAAGCTCGCCGGTGCTGAGGCAGAGTGTACGATTTGCTTGACAGAGTTCTTGGAAGGGGAAGAGATTCGAGTGTTGGCGATTTGTAAGCACGGATTTCATGTTCAGTGTATTCAAACGTGGTTAATTTTGCATTCTTCTTGTCCGACTTGCCGCCGTAGCTACCTCCCTCCCTCGCCGCCGTCCTCTGTGAGCGGCGGCGACGGCGACGGCAATCCCTGA

Protein sequence

MRPTPLDADDTVAFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALALNTAIRCFLRRRGSADDDPSDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEAECTICLTEFLEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPPSSVSGGDGDGNP

Homology

[Close]

BLAST of Bhi12G000037 vs. TAIR 10
Match: AT5G47610.1 (RING/U-box superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-32
Identity = 74/147 (50.34%), Postives = 95/147 (64.63%), Query Frame = 0


Query: 19  SPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALALNTAIRCFLRRRGSADDDP 78
           +P C+    C W+PYSNS DF ANA+V++I+++  LICAL+L  AIRCFLR     +DD 
Sbjct: 17  TPTCNS-HTCRWKPYSNSTDFTANASVLLILVISALICALSLYAAIRCFLRPTLETEDD- 76

Query: 79  SDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEAECTICLTEFLEGEEIRVLA 138
                 E    + PT        P LV+S++   +LAGAEAEC ICL+EF +GE I+VL 
Sbjct: 77  -HKPDPEAAASSTPT-------TPTLVYSSDL--ELAGAEAECAICLSEFEQGESIQVLE 136

Query: 139 ICKHGFHVQCIQTWLILHSSCPTCRRS 166
            C+HGFHV+CI  WL   SSCPTCR S
Sbjct: 137 KCQHGFHVKCIHKWLSTRSSCPTCRTS 151

[Close]

BLAST of Bhi12G000037 vs. TAIR 10
Match: AT4G17245.1 (RING/U-box superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-28
Identity = 76/159 (47.80%), Postives = 92/159 (57.86%), Query Frame = 0


Query: 15  QPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALALNTAIRCFLRRRGSA 74
           QP  +  C    +C W+PYS+S DF ANA +++IIL C  IC L+L+ AIRC LR     
Sbjct: 10  QPELTSTCTS-HSCGWKPYSHSNDFAANAFLLLIILFCSFICVLSLHAAIRCCLRPVLQH 69

Query: 75  DDDPSDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEAECTICLTEFLEGEEI 134
              P D   E    +  PTLV     +P L         LAG EAEC ICL+EF +G+ +
Sbjct: 70  VPKP-DPDLEATHPDAPPTLV----YSPGL--------NLAGNEAECIICLSEFQDGDTL 129

Query: 135 RVLAICKHGFHVQCIQTWL-ILHSSCPTCRRSYLPPSPP 173
           RVL  CKHGFHV CIQ WL   HSSCPTCR +    SPP
Sbjct: 130 RVLERCKHGFHVYCIQKWLSSSHSSCPTCRTNIF-SSPP 153

[Close]

BLAST of Bhi12G000037 vs. TAIR 10
Match: AT5G05280.1 (RING/U-box superfamily protein )

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-25
Identity = 62/144 (43.06%), Postives = 85/144 (59.03%), Query Frame = 0


Query: 35  NSRDFEANAAVVVIILLCGLICALALNTAIRCFLR--RRGSADDDPSDSRQEELQDETKP 94
           N    + +  +++  LLC LICAL +N+ +RC LR  RR + ++DP D+     +   K 
Sbjct: 33  NIASMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTNANVAKGIKKR 92

Query: 95  TLVDKLKMAPALVFSAETKPKLAGAEAECTICLTEFLEGEEIRVLAICKHGFHVQCIQTW 154
                LK+ P   +S E K K      EC ICL +F+EGE +RVL  C HGFHV+CI TW
Sbjct: 93  A----LKVIPVDSYSPELKMK----ATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTW 152

Query: 155 LILHSSCPTCRRSYLPPSPPSSVS 177
           L+ HSSCPTCR+S L    P++ S
Sbjct: 153 LLSHSSCPTCRQSLLEHQTPANGS 168

[Close]

BLAST of Bhi12G000037 vs. TAIR 10
Match: AT1G49230.1 (RING/U-box superfamily protein )

HSP 1 Score: 106.3 bits (264), Expect = 2.7e-23
Identity = 54/132 (40.91%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 32  PYSNSRDFEANAAVVVIILLCGLICALALNTAIRCFLRRRGSADDDPSDSRQEELQDETK 91
           PY    +F+AN  +V+ +LLC L+C+L LN+ IRC LR    ++  PS++  +       
Sbjct: 45  PYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALR---CSNLVPSEAGGDNYPVRLT 104

Query: 92  PTLVDKLKMAPALVFSAETKPKLAGAEAECTICLTEFLEGEEIRVLAICKHGFHVQCIQT 151
            T V +  +      S  T+  L G + EC ICL+EF+  E +++L  C HGFHV+CI  
Sbjct: 105 NTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDK 164

Query: 152 WLILHSSCPTCR 164
           WL  HSSCPTCR
Sbjct: 165 WLSSHSSCPTCR 173

[Close]

BLAST of Bhi12G000037 vs. TAIR 10
Match: AT3G10910.1 (RING/U-box superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 3.5e-23
Identity = 67/154 (43.51%), Postives = 90/154 (58.44%), Query Frame = 0


Query: 35  NSRDFEANAAVVVIILLCGLICALALNTAIRCFLR--RRGSADDDPSD--SRQEELQDET 94
           N   F+ N  +++  LLC LICAL+LN+A+RC LR  RR ++DD  S+  +    L    
Sbjct: 25  NDTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLA 84

Query: 95  KPTLVDK--LKMAPALVFSAETKPKLAGAEAECTICLTEFLEGEEIRVLAICKHGFHVQC 154
             T + K  LK  P  ++ +      A    EC ICL +F +GE++RVL  C HGFHV+C
Sbjct: 85  AATGLKKQALKQIPVGLYGSGIIDMKA---TECLICLGDFEDGEKVRVLPKCNHGFHVRC 144

Query: 155 IQTWLILHSSCPTCRRSYLPPSP-PSSVSGGDGD 182
           I TWL+  SSCPTCR+S L   P P +VS  D D
Sbjct: 145 IDTWLLSRSSCPTCRQSLLLEQPSPMAVSRRDED 175

[Close]

BLAST of Bhi12G000037 vs. ExPASy Swiss-Prot
Match: Q9FGJ6 (RING-H2 finger protein ATL79 OS=Arabidopsis thaliana OX=3702 GN=ATL79 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-31
Identity = 74/147 (50.34%), Postives = 95/147 (64.63%), Query Frame = 0


Query: 19  SPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALALNTAIRCFLRRRGSADDDP 78
           +P C+    C W+PYSNS DF ANA+V++I+++  LICAL+L  AIRCFLR     +DD 
Sbjct: 17  TPTCNS-HTCRWKPYSNSTDFTANASVLLILVISALICALSLYAAIRCFLRPTLETEDD- 76

Query: 79  SDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEAECTICLTEFLEGEEIRVLA 138
                 E    + PT        P LV+S++   +LAGAEAEC ICL+EF +GE I+VL 
Sbjct: 77  -HKPDPEAAASSTPT-------TPTLVYSSDL--ELAGAEAECAICLSEFEQGESIQVLE 136

Query: 139 ICKHGFHVQCIQTWLILHSSCPTCRRS 166
            C+HGFHV+CI  WL   SSCPTCR S
Sbjct: 137 KCQHGFHVKCIHKWLSTRSSCPTCRTS 151

[Close]

BLAST of Bhi12G000037 vs. ExPASy Swiss-Prot
Match: Q9FLC6 (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.4e-24
Identity = 62/144 (43.06%), Postives = 85/144 (59.03%), Query Frame = 0


Query: 35  NSRDFEANAAVVVIILLCGLICALALNTAIRCFLR--RRGSADDDPSDSRQEELQDETKP 94
           N    + +  +++  LLC LICAL +N+ +RC LR  RR + ++DP D+     +   K 
Sbjct: 33  NIASMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTNANVAKGIKKR 92

Query: 95  TLVDKLKMAPALVFSAETKPKLAGAEAECTICLTEFLEGEEIRVLAICKHGFHVQCIQTW 154
                LK+ P   +S E K K      EC ICL +F+EGE +RVL  C HGFHV+CI TW
Sbjct: 93  A----LKVIPVDSYSPELKMK----ATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTW 152

Query: 155 LILHSSCPTCRRSYLPPSPPSSVS 177
           L+ HSSCPTCR+S L    P++ S
Sbjct: 153 LLSHSSCPTCRQSLLEHQTPANGS 168

[Close]

BLAST of Bhi12G000037 vs. ExPASy Swiss-Prot
Match: Q6NQG7 (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.8e-22
Identity = 54/132 (40.91%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 32  PYSNSRDFEANAAVVVIILLCGLICALALNTAIRCFLRRRGSADDDPSDSRQEELQDETK 91
           PY    +F+AN  +V+ +LLC L+C+L LN+ IRC LR    ++  PS++  +       
Sbjct: 45  PYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALR---CSNLVPSEAGGDNYPVRLT 104

Query: 92  PTLVDKLKMAPALVFSAETKPKLAGAEAECTICLTEFLEGEEIRVLAICKHGFHVQCIQT 151
            T V +  +      S  T+  L G + EC ICL+EF+  E +++L  C HGFHV+CI  
Sbjct: 105 NTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDK 164

Query: 152 WLILHSSCPTCR 164
           WL  HSSCPTCR
Sbjct: 165 WLSSHSSCPTCR 173

[Close]

BLAST of Bhi12G000037 vs. ExPASy Swiss-Prot
Match: Q9SG96 (RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.9e-22
Identity = 67/154 (43.51%), Postives = 90/154 (58.44%), Query Frame = 0


Query: 35  NSRDFEANAAVVVIILLCGLICALALNTAIRCFLR--RRGSADDDPSD--SRQEELQDET 94
           N   F+ N  +++  LLC LICAL+LN+A+RC LR  RR ++DD  S+  +    L    
Sbjct: 25  NDTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLA 84

Query: 95  KPTLVDK--LKMAPALVFSAETKPKLAGAEAECTICLTEFLEGEEIRVLAICKHGFHVQC 154
             T + K  LK  P  ++ +      A    EC ICL +F +GE++RVL  C HGFHV+C
Sbjct: 85  AATGLKKQALKQIPVGLYGSGIIDMKA---TECLICLGDFEDGEKVRVLPKCNHGFHVRC 144

Query: 155 IQTWLILHSSCPTCRRSYLPPSP-PSSVSGGDGD 182
           I TWL+  SSCPTCR+S L   P P +VS  D D
Sbjct: 145 IDTWLLSRSSCPTCRQSLLLEQPSPMAVSRRDED 175

[Close]

BLAST of Bhi12G000037 vs. ExPASy Swiss-Prot
Match: Q9LS99 (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.0e-19
Identity = 52/131 (39.69%), Postives = 72/131 (54.96%), Query Frame = 0


Query: 35  NSRDFEANAAVVVIILLCGLICALALNTAIRC-FLRRRGSADDDPSDSRQEELQDETKPT 94
           +  +   N  +++ ILLCG+IC+L L+  IRC F+R R     DP               
Sbjct: 44  DKNNLSGNVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPSTPRDSSVNKG 103

Query: 95  LVDK-LKMAPALVFSAETKPKLAGAEAECTICLTEFLEGEEIRVLAICKHGFHVQCIQTW 154
           +  K LKM P + +S E    L G   EC ICL++F+ GE++RVL  C HGFH++CI  W
Sbjct: 104 IKKKALKMLPVVNYSPEI--NLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKW 163

Query: 155 LILHSSCPTCR 164
           L  H +CP CR
Sbjct: 164 LTQHMTCPKCR 172

[Close]

BLAST of Bhi12G000037 vs. NCBI nr
Match: XP_038875287.1 (RING-H2 finger protein ATL79-like [Benincasa hispida])

HSP 1 Score: 377.1 bits (967), Expect = 8.7e-101
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MRPTPLDADDTVAFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60
           MRPTPLDADDTVAFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL
Sbjct: 1   MRPTPLDADDTVAFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60

Query: 61  NTAIRCFLRRRGSADDDPSDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEAE 120
           NTAIRCFLRRRGSADDDPSDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEAE
Sbjct: 61  NTAIRCFLRRRGSADDDPSDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEAE 120

Query: 121 CTICLTEFLEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPPSSVSGGDG 180
           CTICLTEFLEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPPSSVSGGDG
Sbjct: 121 CTICLTEFLEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPPSSVSGGDG 180

Query: 181 DGNP 185
           DGNP
Sbjct: 181 DGNP 184

[Close]

BLAST of Bhi12G000037 vs. NCBI nr
Match: XP_008437481.1 (PREDICTED: RING-H2 finger protein ATL79-like [Cucumis melo] >KAA0042624.1 RING-H2 finger protein ATL79-like [Cucumis melo var. makuwa] >TYK06025.1 RING-H2 finger protein ATL79-like [Cucumis melo var. makuwa])

HSP 1 Score: 345.9 bits (886), Expect = 2.1e-91
Identity = 168/181 (92.82%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MRPTPLDADDTVAFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60
           MRPTPLDAD+TV FQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL
Sbjct: 1   MRPTPLDADETVRFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60

Query: 61  NTAIRCFLRRRGSADDDPSDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEAE 120
           NTAIRCFLRRRG++DDD +DSRQEELQ+ETKPTLV+KLKMAPALVFSAE KPKLAGAEAE
Sbjct: 61  NTAIRCFLRRRGTSDDDSNDSRQEELQEETKPTLVEKLKMAPALVFSAEMKPKLAGAEAE 120

Query: 121 CTICLTEFLEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPPSSVSGGDG 180
           CTICLTEF EGEEIRVLAICKHGFHVQCIQTWLI HSSCPTCRRSYLPPSP SSVSGGDG
Sbjct: 121 CTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGGDG 180

Query: 181 D 182
           +
Sbjct: 181 N 181

[Close]

BLAST of Bhi12G000037 vs. NCBI nr
Match: XP_022928967.1 (RING-H2 finger protein ATL79-like [Cucurbita moschata] >KAG6579615.1 RING-H2 finger protein ATL79, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 343.2 bits (879), Expect = 1.4e-90
Identity = 168/185 (90.81%), Postives = 176/185 (95.14%), Query Frame = 0


Query: 1   MRPTPLDADDTVAFQ-PPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALA 60
           MRPTPLDADDTV+FQ PPP PPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLIC+LA
Sbjct: 1   MRPTPLDADDTVSFQPPPPPPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLA 60

Query: 61  LNTAIRCFLRRRGSADDDPSDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEA 120
           LNTAIRCFLRRRG AD++PSD+RQEEL+DETKPTLVDKLKMAPALVFSAE KPKLAGAEA
Sbjct: 61  LNTAIRCFLRRRGDADENPSDTRQEELRDETKPTLVDKLKMAPALVFSAEIKPKLAGAEA 120

Query: 121 ECTICLTEFLEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPPSSVSGGD 180
           ECTICLTEF EGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCR SYLPPSP S+  GGD
Sbjct: 121 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRCSYLPPSPSSAAHGGD 180

Query: 181 GDGNP 185
           GDG+P
Sbjct: 181 GDGDP 185

[Close]

BLAST of Bhi12G000037 vs. NCBI nr
Match: XP_004145965.1 (RING-H2 finger protein ATL79 [Cucumis sativus] >KGN49952.1 hypothetical protein Csa_000591 [Cucumis sativus])

HSP 1 Score: 342.0 bits (876), Expect = 3.1e-90
Identity = 166/181 (91.71%), Postives = 173/181 (95.58%), Query Frame = 0


Query: 1   MRPTPLDADDTVAFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60
           MRPTPLDADDTV FQPPPSPPCHDLRACTWRPYS+SRDFEANAAVVVIILLCGLICALAL
Sbjct: 1   MRPTPLDADDTVRFQPPPSPPCHDLRACTWRPYSSSRDFEANAAVVVIILLCGLICALAL 60

Query: 61  NTAIRCFLRRRGSADDDPSDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEAE 120
           NTAIRCFLRRRG++DDD SDSRQEEL +ETKPTL+DKLKMAPALVFSAE KPKLAGAEAE
Sbjct: 61  NTAIRCFLRRRGTSDDDSSDSRQEELPEETKPTLMDKLKMAPALVFSAEMKPKLAGAEAE 120

Query: 121 CTICLTEFLEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPPSSVSGGDG 180
           CTICLTEF EGEEIRVL+ICKHGFHVQCIQTWLI HSSCPTCRRSYLPPSP SS SGGDG
Sbjct: 121 CTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSASGGDG 180

Query: 181 D 182
           +
Sbjct: 181 N 181

[Close]

BLAST of Bhi12G000037 vs. NCBI nr
Match: KAG7017072.1 (RING-H2 finger protein ATL79, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 341.3 bits (874), Expect = 5.3e-90
Identity = 167/184 (90.76%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MRPTPLDADDTVAFQ-PPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALA 60
           MRPTPLDADDTV+FQ PPP PPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLIC+LA
Sbjct: 1   MRPTPLDADDTVSFQPPPPPPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLA 60

Query: 61  LNTAIRCFLRRRGSADDDPSDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEA 120
           LNTAIRCFLRRRG AD++PSD+RQEEL+DETKPTLVDKLKMAPALVFSAE KPKLAGAEA
Sbjct: 61  LNTAIRCFLRRRGDADENPSDTRQEELRDETKPTLVDKLKMAPALVFSAEIKPKLAGAEA 120

Query: 121 ECTICLTEFLEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPPSSVSGGD 180
           ECTICLTEF EGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCR SYLPPSP S+  GGD
Sbjct: 121 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRCSYLPPSPSSAAHGGD 180

Query: 181 GDGN 184
           GDG+
Sbjct: 181 GDGD 184

[Close]

BLAST of Bhi12G000037 vs. ExPASy TrEMBL
Match: A0A5D3C3S3 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001240 PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.0e-91
Identity = 168/181 (92.82%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MRPTPLDADDTVAFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60
           MRPTPLDAD+TV FQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL
Sbjct: 1   MRPTPLDADETVRFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60

Query: 61  NTAIRCFLRRRGSADDDPSDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEAE 120
           NTAIRCFLRRRG++DDD +DSRQEELQ+ETKPTLV+KLKMAPALVFSAE KPKLAGAEAE
Sbjct: 61  NTAIRCFLRRRGTSDDDSNDSRQEELQEETKPTLVEKLKMAPALVFSAEMKPKLAGAEAE 120

Query: 121 CTICLTEFLEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPPSSVSGGDG 180
           CTICLTEF EGEEIRVLAICKHGFHVQCIQTWLI HSSCPTCRRSYLPPSP SSVSGGDG
Sbjct: 121 CTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGGDG 180

Query: 181 D 182
           +
Sbjct: 181 N 181

[Close]

BLAST of Bhi12G000037 vs. ExPASy TrEMBL
Match: A0A1S3AU49 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103482889 PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.0e-91
Identity = 168/181 (92.82%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MRPTPLDADDTVAFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60
           MRPTPLDAD+TV FQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL
Sbjct: 1   MRPTPLDADETVRFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60

Query: 61  NTAIRCFLRRRGSADDDPSDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEAE 120
           NTAIRCFLRRRG++DDD +DSRQEELQ+ETKPTLV+KLKMAPALVFSAE KPKLAGAEAE
Sbjct: 61  NTAIRCFLRRRGTSDDDSNDSRQEELQEETKPTLVEKLKMAPALVFSAEMKPKLAGAEAE 120

Query: 121 CTICLTEFLEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPPSSVSGGDG 180
           CTICLTEF EGEEIRVLAICKHGFHVQCIQTWLI HSSCPTCRRSYLPPSP SSVSGGDG
Sbjct: 121 CTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGGDG 180

Query: 181 D 182
           +
Sbjct: 181 N 181

[Close]

BLAST of Bhi12G000037 vs. ExPASy TrEMBL
Match: A0A6J1ELF7 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111435709 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 6.7e-91
Identity = 168/185 (90.81%), Postives = 176/185 (95.14%), Query Frame = 0


Query: 1   MRPTPLDADDTVAFQ-PPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALA 60
           MRPTPLDADDTV+FQ PPP PPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLIC+LA
Sbjct: 1   MRPTPLDADDTVSFQPPPPPPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLA 60

Query: 61  LNTAIRCFLRRRGSADDDPSDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEA 120
           LNTAIRCFLRRRG AD++PSD+RQEEL+DETKPTLVDKLKMAPALVFSAE KPKLAGAEA
Sbjct: 61  LNTAIRCFLRRRGDADENPSDTRQEELRDETKPTLVDKLKMAPALVFSAEIKPKLAGAEA 120

Query: 121 ECTICLTEFLEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPPSSVSGGD 180
           ECTICLTEF EGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCR SYLPPSP S+  GGD
Sbjct: 121 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRCSYLPPSPSSAAHGGD 180

Query: 181 GDGNP 185
           GDG+P
Sbjct: 181 GDGDP 185

[Close]

BLAST of Bhi12G000037 vs. ExPASy TrEMBL
Match: A0A0A0KNJ7 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G146260 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.5e-90
Identity = 166/181 (91.71%), Postives = 173/181 (95.58%), Query Frame = 0


Query: 1   MRPTPLDADDTVAFQPPPSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALAL 60
           MRPTPLDADDTV FQPPPSPPCHDLRACTWRPYS+SRDFEANAAVVVIILLCGLICALAL
Sbjct: 1   MRPTPLDADDTVRFQPPPSPPCHDLRACTWRPYSSSRDFEANAAVVVIILLCGLICALAL 60

Query: 61  NTAIRCFLRRRGSADDDPSDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEAE 120
           NTAIRCFLRRRG++DDD SDSRQEEL +ETKPTL+DKLKMAPALVFSAE KPKLAGAEAE
Sbjct: 61  NTAIRCFLRRRGTSDDDSSDSRQEELPEETKPTLMDKLKMAPALVFSAEMKPKLAGAEAE 120

Query: 121 CTICLTEFLEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPPSSVSGGDG 180
           CTICLTEF EGEEIRVL+ICKHGFHVQCIQTWLI HSSCPTCRRSYLPPSP SS SGGDG
Sbjct: 121 CTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSASGGDG 180

Query: 181 D 182
           +
Sbjct: 181 N 181

[Close]

BLAST of Bhi12G000037 vs. ExPASy TrEMBL
Match: A0A6J1I2W6 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111469099 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 5.9e-87
Identity = 161/180 (89.44%), Postives = 170/180 (94.44%), Query Frame = 0


Query: 1   MRPTPLDADDTVAFQPP-PSPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALA 60
           MRPTPLDADDTV+++PP P PPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLIC+LA
Sbjct: 1   MRPTPLDADDTVSYRPPSPPPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLA 60

Query: 61  LNTAIRCFLRRRGSADDDPSDSRQEELQDETKPTLVDKLKMAPALVFSAETKPKLAGAEA 120
           LNTAIRCFLRRRG AD++PSD+RQEEL+DETKPTLVDKLKMAPALVFS E KPKLAGAEA
Sbjct: 61  LNTAIRCFLRRRGDADENPSDTRQEELRDETKPTLVDKLKMAPALVFSEEMKPKLAGAEA 120

Query: 121 ECTICLTEFLEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRRSYLPPSPPSSVSGGD 180
           ECTICLTEF EGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCR SYLPPSP S+  GGD
Sbjct: 121 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRCSYLPPSPSSAAHGGD 180

The following BLAST results are available for this feature:

BLAST of Bhi12G000037 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47610.1	1.1e-32	50.34	RING/U-box superfamily protein	[more]
AT4G17245.1	3.6e-28	47.80	RING/U-box superfamily protein	[more]
AT5G05280.1	1.7e-25	43.06	RING/U-box superfamily protein	[more]
AT1G49230.1	2.7e-23	40.91	RING/U-box superfamily protein	[more]
AT3G10910.1	3.5e-23	43.51	RING/U-box superfamily protein	[more]

BLAST of Bhi12G000037 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGJ6	1.5e-31	50.34	RING-H2 finger protein ATL79 OS=Arabidopsis thaliana OX=3702 GN=ATL79 PE=2 SV=1	[more]
Q9FLC6	2.4e-24	43.06	RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1	[more]
Q6NQG7	3.8e-22	40.91	RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1	[more]
Q9SG96	4.9e-22	43.51	RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1	[more]
Q9LS99	3.0e-19	39.69	RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1	[more]

BLAST of Bhi12G000037 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875287.1	8.7e-101	100.00	RING-H2 finger protein ATL79-like [Benincasa hispida]	[more]
XP_008437481.1	2.1e-91	92.82	PREDICTED: RING-H2 finger protein ATL79-like [Cucumis melo] >KAA0042624.1 RING-H...	[more]
XP_022928967.1	1.4e-90	90.81	RING-H2 finger protein ATL79-like [Cucurbita moschata] >KAG6579615.1 RING-H2 fin...	[more]
XP_004145965.1	3.1e-90	91.71	RING-H2 finger protein ATL79 [Cucumis sativus] >KGN49952.1 hypothetical protein ...	[more]
KAG7017072.1	5.3e-90	90.76	RING-H2 finger protein ATL79, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]

BLAST of Bhi12G000037 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C3S3	1.0e-91	92.82	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3AU49	1.0e-91	92.82	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103482889 PE=3 ...	[more]
A0A6J1ELF7	6.7e-91	90.81	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111435709...	[more]
A0A0A0KNJ7	1.5e-90	91.71	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G146260 PE...	[more]
A0A6J1I2W6	5.9e-87	89.44	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111469099 P...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 121..162 e-value: 2.0E-5 score: 34.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 120..163 e-value: 6.2E-12 score: 45.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 121..163 score: 11.913911
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 78..168 e-value: 1.3E-19 score: 71.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..92
None	No IPR available	PANTHER	PTHR46905:SF1	RING-H2 FINGER PROTEIN ATL79-LIKE	coord: 12..176
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 120..169
IPR044602	RING-H2 finger protein ATL10/ATL75-79	PANTHER	PTHR46905	RING-H2 FINGER PROTEIN ATL78	coord: 12..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M000037	Bhi12M000037	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity