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Bhi12G000001 (gene) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATTTTTGGGTCATCCGTACAAATTTCCACAATTTTTGGGTCATCCGTACAAATTCCCCGTGCACCACCGTTGTCGGTGCCATTGATAGAGTAGAGAATGGATGCTCTGAGGGCTTCGTATGGAGGAAGCTCGTCGGATGAAGAAGCGGATACAGTTTCCCCTTCATCAGCATCAACTTCAGCATCAACACCACAACTCTCCGATGAGACCGTGAGCTTTTTACCTTTGCCTCCGCCGTCTCCCTCACTTCTTCATTTTCCAAATTCCACCTGTAGTGCCCTTCTTCCTCCTTACATTTGCAATTTTTATTTTTTATTTTGTAACTTTGCTCATCAACTCTTTCATTATTACTTGTTTAGCTATTTTGGATGATTTGCCAATCGATCAGGCGACTAGGGTTCGAAGCTTCCCTCACGTTCAAGGAAATTATGCCCTACACCTCTATATCCCAGGTATGTGAAGCTATGTAGTTAATAGTTCATTCTTAATTTGATTCTTCAAACCTACATTTTCTATTGCCATTTTGACCGCCCAATGGGGGCTTTTTTGTCTTGTTACCCTGTATCAGTGTTGTTAGTTGAACAACTGAATTTTCTTTTCTAGGGACTCTTCTTTGGTTGATCACTGATCTCATTATTAACAAAGTGGGTTGTTAGAGTCTAGACTTGGAATCAATGTCTAACCAATTTAATCGTAAACCTTAAAAAAAACAATATTTTTTTTGCTACTTTACAACATTTCTTTTTGAAAATATATGTTGATTTCATTTTGTTTATGCCTCTCAACCCCTCTAGCCTGCTACATTGGCTTCTTAAACAGTATATGTAATACTATCACTTGCAATGCATTTCACACATCTATAATTTGCCTTTAATTGTAACTTATGGGAATTCTAGACTAATCATGATTGGAACAAACGAAAGAAAATCAATTAATTATATACGATAATGTTCAACAATGTATGGCTTACTTCTATACTTTTGGGTTTTTACTCTGAATTAAAACTTTTTCTAAAGCTTCTTTCGTCCATAAAAGCACTTCAAAAATATTCCGTTATCAAATGTATTTGCAATCTTCTAAATGTTCGTATACTTGATGAGGAAAAGCATTAAAGGTAGACTATGAGTTTATTTAAAGAAATATAACACGTCTTTTGGTTAATATTGGTAGATTTCTGTGTTTAGTTTTATTGATTATAAATCTAAAAAATTTAAAGATATTATGAACATCTACAAGTTAAACATTCTTAAATAATGAATCTAAATATTGTGTGATTTTGTCAATTTGTCCTATGCAATATACTTTCACATAGATGATCACGCCAACTATAAATTATTTTGATTTTCATTGTTCCCAGTGTATGTACCAACTAATGGAAGGAAGGAGGTGGCCTTGTTTTTGAAGAAAGTTTCCTCACTTGTGCCTGCTCTCCATCTTGTCGATATTGACGTTCCTTTGGATGTTTTATGTAAAGATGACCACAAACTTGAGCAAGCATTGGCTAGAGAATTTCACGTAAGTTTGTCAAGAACAGTACCAATCCGAGTACACCAGATTGACTCAATAGTGACTATGCTTCGCCAGAAGCTTCAGTCTCAAAGGCGGTAAGTTTAAGCTCTCCATTGATTTCGATTAGTAATCTCCAACTTGTTTTTGTATTTAACCTGTGTTTTTTTTTAACAGTTATTGGATTGATTTTAGTAAGTGGGAGACTTTTGTTAACGATGATCTCTCTCGAACCTTTTTGTCAATGGAAATTATTACTGGAGGGCTAATGGAGGTACGTCACATTTGAGGGATTTCCATTTCCGTTATCTTTTCATTTTTGGTGTAAATGTGCTTTTCTTCATTCACAATTTCTGGCTAATAATATGTGAGCTTCCACTTCTGTTAAAAGTTTTTTATTAGATTGTAATGAACTCTTTACCTCACTTGTGAGTTTGATTTTATGCATCTGATGCATGGATCAAAAGTTTTGATTTTTTTTTTTTTTTTAAAATGGTAATTGGATTGGATTGGAAAGGAGAAAGGGAATAGAGTTGTGTACAGTGTAATGCAAATGAAACTCAACTCCAGAAAAGATACTTTGCATAAAAGCATGACTTCATTTAACAAGAAACACAACTTGACCAGTGAGAACAAAAATAGGATCAAAATTTTTGAATTAGAGTATGAGACAATAATTTTTACGTAGAATTTTGTAGGATGAGACAACTTTCTATAGAATTTGTTGCAATTTGCCGAAATTTGATTACAAATGCATACACATATATGCATAGTTGTGTTTTGCATTCATGTTGTCCAAATATGAAATATTGGAAAATTAGGATTAAGTTGCCAACACGCGAGTGCGACAATAATTTGTTGTACACATTTAGTATTGTTATTCTCTCTAACACCCTCTCATGTGATGTTTTGAAATCACAAGTTTATAATTGTAACTCAAGAACAAACGTGTTGGTTAGGCCATCTTTGTTTGAGATCTTTTGACATAGGTTATGGCCATTTTATGAGTTTTACATGGTTGAGGTTGACATTATCACATGGATTAAAGCGTGGTCCCTTTGTTTTCAATTGGCTGCAGATCAGAAAACAAATCCAAATTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGTTGGTTGCATTAATTATTTTTTCCCACTTTCCATCTCTATACAATTCATGAAGAAAATGACCTCCTAACTCTATTTTGTAGGAAGCAAGACCACATATATCTCTTGCCTGGGCAATAGGAGACCTCAGTAAATTATTAAGCCAAGCCGTTCATAATGAAATGAAAAGTTCCGCAGTTATGCAAACATTGAAGAGATGTATTTTCACCACCAAATTCAAGGGCATTGAATGTAAGATTGGTAAAAAAATATATAAAATATGTAAATTTCCTGATGAATAAAAAGAACATCGTGAATTTGTATACGTGTCCTATTGATTCCTTATGTGTCAATGGATTGTTTTTTATTATTTTGGCTTTACTAACAAAATCCCTTACTTTAAGTTTTATAGATATTGCCCTTTTTATTACCTTTATTTAATGGTCTTTATTTGTGAAGGTTCATTTATAAGATTCTTAGGTTGTACTTTGTTGATTGATTAAATTTGATAGGAATCTATAGAAAATGGATTGTTTATACTTGTAAGGGGCATCTCAGTCCACTATAGTGAAAAGACTAGAGAAATTGTGCTTCTTACCAATTTCATTAAACGGAGGTTGCAAAATCGAATGGCGACATAGACAATGTAATGATAGAGAGAGGTCATTGCCCTCTTGTCTATGCATCAGGCAATATCATATTTCTTTATCGGTTCTTTCTTTTGTGCCAAGCTTGAGTTAATACTAATAAAATGATATGCTCTCTTGAAAGAAAATGATCAAATGACAAAGAGCTTTGGAATCATATTCGGAAATGGAGAGAACACTAGGAAAGGGTGAGCAACTACTTTTGAATGCAAGGTGCGGATGGCTTTATCTCTTGCCTTGGCACATAACAATTAATGTACATTTGGTGCACAATAAATTAGTTCTTAGAGTTGTACCTATTTTTGTGCAGTCTACTCAAATGTCTAATTATAACATGACACATTTTTCTTTTTTTCTAAAAAAAAAATACTTGTAGATATATTTTTTCCTTTTGTGATTGTAGGGATGCATGAAGGCTACACCCAAATATTATCCCTAGTTCTTATCCCGCCGTTTCTTCCAATGCCTACATGTAGGTGATTTAGATACATTTTTTTAATGATTTTTTAGGTTTAATCATATGATTATTTACCTTGAAAATACT CAATTTTTGGGTCATCCGTACAAATTTCCACAATTTTTGGGTCATCCGTACAAATTCCCCGTGCACCACCGTTGTCGGTGCCATTGATAGAGTAGAGAATGGATGCTCTGAGGGCTTCGTATGGAGGAAGCTCGTCGGATGAAGAAGCGGATACAGTTTCCCCTTCATCAGCATCAACTTCAGCATCAACACCACAACTCTCCGATGAGACCGTGAGCTTTTTACCTTTGCCTCCGCCGTCTCCCTCACTTCTTCATTTTCCAAATTCCACCTCTATTTTGGATGATTTGCCAATCGATCAGGCGACTAGGGTTCGAAGCTTCCCTCACGTTCAAGGAAATTATGCCCTACACCTCTATATCCCAGTGTATGTACCAACTAATGGAAGGAAGGAGGTGGCCTTGTTTTTGAAGAAAGTTTCCTCACTTGTGCCTGCTCTCCATCTTGTCGATATTGACGTTCCTTTGGATGTTTTATGTAAAGATGACCACAAACTTGAGCAAGCATTGGCTAGAGAATTTCACGTAAGTTTGTCAAGAACAGTACCAATCCGAGTACACCAGATTGACTCAATAGTGACTATGCTTCGCCAGAAGCTTCAGTCTCAAAGGCGTTATTGGATTGATTTTAGTAAGTGGGAGACTTTTGTTAACGATGATCTCTCTCGAACCTTTTTGTCAATGGAAATTATTACTGGAGGGCTAATGGAGATCAGAAAACAAATCCAAATTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGAAGCAAGACCACATATATCTCTTGCCTGGGCAATAGGAGACCTCAGTAAATTATTAAGCCAAGCCGTTCATAATGAAATGAAAAGTTCCGCAGTTATGCAAACATTGAAGAGATGTATTTTCACCACCAAATTCAAGGGCATTGAATGGATGCATGAAGGCTACACCCAAATATTATCCCTAGTTCTTATCCCGCCGTTTCTTCCAATGCCTACATGTAGGTGATTTAGATACATTTTTTTAATGATTTTTTAGGTTTAATCATATGATTATTTACCTTGAAAATACT ATGGATGCTCTGAGGGCTTCGTATGGAGGAAGCTCGTCGGATGAAGAAGCGGATACAGTTTCCCCTTCATCAGCATCAACTTCAGCATCAACACCACAACTCTCCGATGAGACCGTGAGCTTTTTACCTTTGCCTCCGCCGTCTCCCTCACTTCTTCATTTTCCAAATTCCACCTCTATTTTGGATGATTTGCCAATCGATCAGGCGACTAGGGTTCGAAGCTTCCCTCACGTTCAAGGAAATTATGCCCTACACCTCTATATCCCAGTGTATGTACCAACTAATGGAAGGAAGGAGGTGGCCTTGTTTTTGAAGAAAGTTTCCTCACTTGTGCCTGCTCTCCATCTTGTCGATATTGACGTTCCTTTGGATGTTTTATGTAAAGATGACCACAAACTTGAGCAAGCATTGGCTAGAGAATTTCACGTAAGTTTGTCAAGAACAGTACCAATCCGAGTACACCAGATTGACTCAATAGTGACTATGCTTCGCCAGAAGCTTCAGTCTCAAAGGCGTTATTGGATTGATTTTAGTAAGTGGGAGACTTTTGTTAACGATGATCTCTCTCGAACCTTTTTGTCAATGGAAATTATTACTGGAGGGCTAATGGAGATCAGAAAACAAATCCAAATTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGAAGCAAGACCACATATATCTCTTGCCTGGGCAATAGGAGACCTCAGTAAATTATTAAGCCAAGCCGTTCATAATGAAATGAAAAGTTCCGCAGTTATGCAAACATTGAAGAGATGTATTTTCACCACCAAATTCAAGGGCATTGAATGGATGCATGAAGGCTACACCCAAATATTATCCCTAGTTCTTATCCCGCCGTTTCTTCCAATGCCTACATGTAGGTGA MDALRASYGGSSSDEEADTVSPSSASTSASTPQLSDETVSFLPLPPPSPSLLHFPNSTSILDDLPIDQATRVRSFPHVQGNYALHLYIPVYVPTNGRKEVALFLKKVSSLVPALHLVDIDVPLDVLCKDDHKLEQALAREFHVSLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFVNDDLSRTFLSMEIITGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISLAWAIGDLSKLLSQAVHNEMKSSAVMQTLKRCIFTTKFKGIEWMHEGYTQILSLVLIPPFLPMPTCR Homology
BLAST of Bhi12G000001 vs. TAIR 10
Match: AT5G51170.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 305.4 bits (781), Expect = 4.9e-83 Identity = 160/275 (58.18%), Postives = 199/275 (72.36%), Query Frame = 0
BLAST of Bhi12G000001 vs. TAIR 10
Match: AT5G51170.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 166 Blast hits to 166 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 19; Plants - 35; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). ) HSP 1 Score: 229.6 bits (584), Expect = 3.4e-60 Identity = 119/212 (56.13%), Postives = 155/212 (73.11%), Query Frame = 0
BLAST of Bhi12G000001 vs. ExPASy Swiss-Prot
Match: Q91W78 (U6 snRNA phosphodiesterase OS=Mus musculus OX=10090 GN=Usb1 PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 3.4e-20 Identity = 69/247 (27.94%), Postives = 117/247 (47.37%), Query Frame = 0
BLAST of Bhi12G000001 vs. ExPASy Swiss-Prot
Match: Q6DEF6 (U6 snRNA phosphodiesterase OS=Danio rerio OX=7955 GN=usb1 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 4.8e-19 Identity = 87/267 (32.58%), Postives = 128/267 (47.94%), Query Frame = 0
BLAST of Bhi12G000001 vs. ExPASy Swiss-Prot
Match: Q5I0I5 (U6 snRNA phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Usb1 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 9.1e-18 Identity = 62/247 (25.10%), Postives = 115/247 (46.56%), Query Frame = 0
BLAST of Bhi12G000001 vs. ExPASy Swiss-Prot
Match: Q7ZYI9 (U6 snRNA phosphodiesterase OS=Xenopus laevis OX=8355 GN=usb1 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 4.2e-15 Identity = 60/202 (29.70%), Postives = 99/202 (49.01%), Query Frame = 0
BLAST of Bhi12G000001 vs. ExPASy Swiss-Prot
Match: Q0II50 (U6 snRNA phosphodiesterase OS=Bos taurus OX=9913 GN=USB1 PE=2 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.1e-14 Identity = 73/241 (30.29%), Postives = 117/241 (48.55%), Query Frame = 0
BLAST of Bhi12G000001 vs. NCBI nr
Match: XP_038875355.1 (U6 snRNA phosphodiesterase isoform X2 [Benincasa hispida]) HSP 1 Score: 536.6 bits (1381), Expect = 1.4e-148 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
BLAST of Bhi12G000001 vs. NCBI nr
Match: XP_038875354.1 (U6 snRNA phosphodiesterase isoform X1 [Benincasa hispida]) HSP 1 Score: 536.6 bits (1381), Expect = 1.4e-148 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
BLAST of Bhi12G000001 vs. NCBI nr
Match: XP_008467330.1 (PREDICTED: U6 snRNA phosphodiesterase [Cucumis melo]) HSP 1 Score: 483.0 bits (1242), Expect = 1.8e-132 Identity = 244/275 (88.73%), Postives = 258/275 (93.82%), Query Frame = 0
BLAST of Bhi12G000001 vs. NCBI nr
Match: XP_004143673.1 (U6 snRNA phosphodiesterase [Cucumis sativus] >KGN50332.1 hypothetical protein Csa_000253 [Cucumis sativus]) HSP 1 Score: 476.9 bits (1226), Expect = 1.3e-130 Identity = 241/275 (87.64%), Postives = 256/275 (93.09%), Query Frame = 0
BLAST of Bhi12G000001 vs. NCBI nr
Match: XP_023549871.1 (U6 snRNA phosphodiesterase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 470.3 bits (1209), Expect = 1.2e-128 Identity = 239/277 (86.28%), Postives = 252/277 (90.97%), Query Frame = 0
BLAST of Bhi12G000001 vs. ExPASy TrEMBL
Match: A0A1S3CTB0 (U6 snRNA phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103504707 PE=3 SV=1) HSP 1 Score: 483.0 bits (1242), Expect = 8.9e-133 Identity = 244/275 (88.73%), Postives = 258/275 (93.82%), Query Frame = 0
BLAST of Bhi12G000001 vs. ExPASy TrEMBL
Match: A0A0A0KPH5 (U6 snRNA phosphodiesterase OS=Cucumis sativus OX=3659 GN=Csa_5G167730 PE=3 SV=1) HSP 1 Score: 476.9 bits (1226), Expect = 6.4e-131 Identity = 241/275 (87.64%), Postives = 256/275 (93.09%), Query Frame = 0
BLAST of Bhi12G000001 vs. ExPASy TrEMBL
Match: A0A6J1EQH7 (U6 snRNA phosphodiesterase OS=Cucurbita moschata OX=3662 GN=LOC111435686 PE=3 SV=1) HSP 1 Score: 469.2 bits (1206), Expect = 1.3e-128 Identity = 238/275 (86.55%), Postives = 250/275 (90.91%), Query Frame = 0
BLAST of Bhi12G000001 vs. ExPASy TrEMBL
Match: A0A6J1HYN3 (U6 snRNA phosphodiesterase OS=Cucurbita maxima OX=3661 GN=LOC111468846 PE=3 SV=1) HSP 1 Score: 468.0 bits (1203), Expect = 3.0e-128 Identity = 240/281 (85.41%), Postives = 254/281 (90.39%), Query Frame = 0
BLAST of Bhi12G000001 vs. ExPASy TrEMBL
Match: A0A6J1DNL4 (U6 snRNA phosphodiesterase OS=Momordica charantia OX=3673 GN=LOC111022878 PE=3 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 6.8e-109 Identity = 212/275 (77.09%), Postives = 229/275 (83.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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