Bhi11G002219 (gene) Wax gourd (B227) v1

Overview


Name	Bhi11G002219
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	MuDRA-like transposase
Location	chr11: 71754764 .. 71755210 (-)
RNA-Seq Expression	Bhi11G002219
Synteny	Bhi11G002219

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACGACAGAGTATAGATCTAGAAGGCATTTTGTGAGGTCGATTGATCAACACATCTTTGAAGTCGTTGATAATCACCTTAGTGGAGTTGTTGATTTGAATGCGCGTATGTGTACGTGCAATGATTTCGAGTATTATGACATTTCATGCCCCCATACGATTGTAGCAGCCCATTACTAGAACATTGATCCATATACACTTTGCTTCTCTTGTTACAACATTCAGGCTATTTACAGATCATATTCAGAACCTATTTTCCCTGTAGGCCCTATTTCAGAATGGTCTCGAGAGGATGATTATGAAGACATCCAGATATTGCCACCAATGCATATCGCTCAAGTTGGCCGCTGCCAAGAGATAAGAATACTGTATGCAGAAGAGGTCACTCAAATTCACAAATGTACTAGGTGCGGTATGCGTGGCCACAATCGAGTAACTTACTGA

mRNA sequence

ATGGCGACGACAGAGTATAGATCTAGAAGGCATTTTGTGAGGTCGATTGATCAACACATCTTTGAAGTCGTTGATAATCACCTTAGTGGAGTTGTTGATTTGAATGCGCGTATGTGCCCTATTTCAGAATGGTCTCGAGAGGATGATTATGAAGACATCCAGATATTGCCACCAATGCATATCGCTCAAGTTGGCCGCTGCCAAGAGATAAGAATACTGTATGCAGAAGAGGTCACTCAAATTCACAAATGTACTAGGTGCGGTATGCGTGGCCACAATCGAGTAACTTACTGA

Coding sequence (CDS)

ATGGCGACGACAGAGTATAGATCTAGAAGGCATTTTGTGAGGTCGATTGATCAACACATCTTTGAAGTCGTTGATAATCACCTTAGTGGAGTTGTTGATTTGAATGCGCGTATGTGCCCTATTTCAGAATGGTCTCGAGAGGATGATTATGAAGACATCCAGATATTGCCACCAATGCATATCGCTCAAGTTGGCCGCTGCCAAGAGATAAGAATACTGTATGCAGAAGAGGTCACTCAAATTCACAAATGTACTAGGTGCGGTATGCGTGGCCACAATCGAGTAACTTACTGA

Protein sequence

MATTEYRSRRHFVRSIDQHIFEVVDNHLSGVVDLNARMCPISEWSREDDYEDIQILPPMHIAQVGRCQEIRILYAEEVTQIHKCTRCGMRGHNRVTY

Homology

[Close]

BLAST of Bhi11G002219 vs. NCBI nr
Match: XP_038889288.1 (uncharacterized protein LOC120079194 [Benincasa hispida])

HSP 1 Score: 119.8 bits (299), Expect = 1.3e-23
Identity = 68/144 (47.22%), Postives = 73/144 (50.69%), Query Frame = 0


Query: 1   MATTEYRSRRHFVRSIDQHIFEVVDNHLSGVVDLNARMC--------------------- 60
           MA  EYRSRRHFVR ID HIFEV+DNHLSGVV LN   C                     
Sbjct: 1   MAMVEYRSRRHFVRPIDLHIFEVIDNHLSGVVVLNVCTCTCKDFNYYDMPCSHVIAATRY 60

Query: 61  ------------------------------PISEWSREDDYEDIQILPPMHIAQVGRCQE 94
                                         PI EW R DDY+DIQILPP+ + QVG   E
Sbjct: 61  RNIDPYTQCSLCYNIQVVYGLYAKPIFLVGPILEWPRGDDYKDIQILPPICVTQVGHHWE 120

[Close]

BLAST of Bhi11G002219 vs. NCBI nr
Match: XP_038904344.1 (uncharacterized protein LOC120090698 [Benincasa hispida])

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-08
Identity = 45/115 (39.13%), Postives = 52/115 (45.22%), Query Frame = 0


Query: 2   ATTEYRSRRHFVRSIDQHIFEVVDNHLSGVVDLNARMC---------------------- 61
           A T+  ++RHFVR IDQHIF+VV  HLSGVVDLNARMC                      
Sbjct: 188 AETKMTTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYR 247

Query: 62  -----------------------------PISEWSREDDYEDIQILPPMHIAQVG 66
                                         ISE  + DDYEDIQIL P+ +AQVG
Sbjct: 248 NIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSPIRVAQVG 302

[Close]

BLAST of Bhi11G002219 vs. NCBI nr
Match: XP_022159268.1 (uncharacterized protein LOC111025678 [Momordica charantia])

HSP 1 Score: 67.0 bits (162), Expect = 1.0e-07
Identity = 43/140 (30.71%), Postives = 57/140 (40.71%), Query Frame = 0


Query: 8   SRRHFVRSIDQHIFEVVDNHLSGVVDLNARMCP--------------------------- 67
           +RRH V +IDQ  F+V D +L G+VDLNA MC                            
Sbjct: 366 ARRHVVDNIDQFHFQVRDGNLDGIVDLNAMMCSCREFDYFKIPCSHAIAAATMRNINPYS 425

Query: 68  ------------------------ISEWSREDDYEDIQILPPMHIAQVGRCQEIRILYAE 97
                                   IS W+   ++ +I + PP  + +VGR + +RI    
Sbjct: 426 LCDEAYTTNSWILAYAEPIFPVGHISTWNSSPEFVNIPVEPPKTVPRVGRRKTVRIPSTG 485

[Close]

BLAST of Bhi11G002219 vs. NCBI nr
Match: XP_022157875.1 (uncharacterized protein LOC111024486 [Momordica charantia])

HSP 1 Score: 64.3 bits (155), Expect = 6.6e-07
Identity = 37/90 (41.11%), Postives = 47/90 (52.22%), Query Frame = 0


Query: 7   RSRRHFVRSIDQHIFEVVDNHLSGVVDLNARMCPISEWSREDDYEDIQILPPMHIAQVGR 66
           R R H VR ID++  E +   + G  +    +    +W   DDY    I PP  + +VGR
Sbjct: 304 RVRYHHVRPIDRYQIETL---ILGYAEPVYPLGDEKDWILLDDYVPKMIKPPKFVPRVGR 363

Query: 67  CQEIRILYAEEVTQIHKCTRCGMRGHNRVT 97
            Q  RI  A EV Q+HKC RCG  GHNR T
Sbjct: 364 RQTTRIPSAGEVRQVHKCGRCGNVGHNRKT 390

[Close]

BLAST of Bhi11G002219 vs. NCBI nr
Match: XP_038895917.1 (uncharacterized protein LOC120084090 [Benincasa hispida])

HSP 1 Score: 63.9 bits (154), Expect = 8.6e-07
Identity = 37/141 (26.24%), Postives = 59/141 (41.84%), Query Frame = 0


Query: 7   RSRRHFVRSIDQHIFEVVDNHLSGVVDLNARMC--------------------------- 66
           ++ RH VR IDQH FE++D  L G  +++ R+C                           
Sbjct: 24  KASRHEVRPIDQHEFEMIDGGLRGRANIHTRICTCLKFDYYEIPCSHVIAACRVQNIDPI 83

Query: 67  ------------------PI------SEWSREDDYEDIQILPPMHIAQVGRCQEIRILYA 97
                             PI      S W +   + +++ LPP  + ++GR +  R   A
Sbjct: 84  SLCSWVYSIESVLAAYAEPIRLAGHFSGWKQSSTFINVETLPPKRVPRLGRPRTTRFPSA 143

[Close]

BLAST of Bhi11G002219 vs. ExPASy TrEMBL
Match: A0A6J1DYC4 (uncharacterized protein LOC111025678 OS=Momordica charantia OX=3673 GN=LOC111025678 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.9e-08
Identity = 43/140 (30.71%), Postives = 57/140 (40.71%), Query Frame = 0


Query: 8   SRRHFVRSIDQHIFEVVDNHLSGVVDLNARMCP--------------------------- 67
           +RRH V +IDQ  F+V D +L G+VDLNA MC                            
Sbjct: 366 ARRHVVDNIDQFHFQVRDGNLDGIVDLNAMMCSCREFDYFKIPCSHAIAAATMRNINPYS 425

Query: 68  ------------------------ISEWSREDDYEDIQILPPMHIAQVGRCQEIRILYAE 97
                                   IS W+   ++ +I + PP  + +VGR + +RI    
Sbjct: 426 LCDEAYTTNSWILAYAEPIFPVGHISTWNSSPEFVNIPVEPPKTVPRVGRRKTVRIPSTG 485

[Close]

BLAST of Bhi11G002219 vs. ExPASy TrEMBL
Match: A0A6J1DU86 (uncharacterized protein LOC111024486 OS=Momordica charantia OX=3673 GN=LOC111024486 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.2e-07
Identity = 37/90 (41.11%), Postives = 47/90 (52.22%), Query Frame = 0


Query: 7   RSRRHFVRSIDQHIFEVVDNHLSGVVDLNARMCPISEWSREDDYEDIQILPPMHIAQVGR 66
           R R H VR ID++  E +   + G  +    +    +W   DDY    I PP  + +VGR
Sbjct: 304 RVRYHHVRPIDRYQIETL---ILGYAEPVYPLGDEKDWILLDDYVPKMIKPPKFVPRVGR 363

Query: 67  CQEIRILYAEEVTQIHKCTRCGMRGHNRVT 97
            Q  RI  A EV Q+HKC RCG  GHNR T
Sbjct: 364 RQTTRIPSAGEVRQVHKCGRCGNVGHNRKT 390

[Close]

BLAST of Bhi11G002219 vs. ExPASy TrEMBL
Match: A0A6J1DQY6 (uncharacterized protein LOC111023509 OS=Momordica charantia OX=3673 GN=LOC111023509 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 9.3e-07
Identity = 45/141 (31.91%), Postives = 57/141 (40.43%), Query Frame = 0


Query: 7   RSRRHFVRSIDQHIFEVVDNHLSGVVDLNARMCP-------------------------- 66
           R+RRH V +IDQ  F+V D +L G+VDLNA  C                           
Sbjct: 278 RARRH-VDNIDQFHFQVQDGNLDGIVDLNAMTCSCQEFYYFKIPCSHAIAAATMRNINPY 337

Query: 67  -------------------------ISEWSREDDYEDIQILPPMHIAQVGRCQEIRILYA 97
                                    IS WS   ++ +I + PP  + +VGR +  RI   
Sbjct: 338 SLCDEAYTANSWILAYAEPIFPIRYISTWSSSPEFVNIPVEPPKTVPRVGRRKTARIPSM 397

[Close]

BLAST of Bhi11G002219 vs. ExPASy TrEMBL
Match: A0A6J1DTD4 (uncharacterized protein LOC111023804 OS=Momordica charantia OX=3673 GN=LOC111023804 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.2e-06
Identity = 40/138 (28.99%), Postives = 55/138 (39.86%), Query Frame = 0


Query: 8   SRRHFVRSIDQHIFEVVDNHLSGVVDLNARMCP--------------------------- 67
           +RRH V +IDQ  F+V D++L G+VDLNA  C                            
Sbjct: 40  ARRHIVDNIDQFHFQVRDDNLDGIVDLNAMTCSCWEFDYFKIPCSHAIAAATMRNINPYS 99

Query: 68  ------------------------ISEWSREDDYEDIQILPPMHIAQVGRCQEIRILYAE 95
                                   +S W+   ++ +I + PP  + +VGR +  RI    
Sbjct: 100 LCDEAYTTNSWILAYAEPIFPVGHVSTWNSSPEFVNIPVEPPKTVPRVGRRKTTRIPSTG 159

[Close]

BLAST of Bhi11G002219 vs. ExPASy TrEMBL
Match: A0A6J1DWF8 (uncharacterized protein LOC111025117 OS=Momordica charantia OX=3673 GN=LOC111025117 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.6e-06
Identity = 41/140 (29.29%), Postives = 53/140 (37.86%), Query Frame = 0


Query: 8   SRRHFVRSIDQHIFEVVDNHLSGVVDLNARMCPISE------------------------ 67
           SRRH V +IDQ  FEV D +L+G VDL ++ C   E                        
Sbjct: 243 SRRHIVMNIDQFNFEVRDGNLNGDVDLQSQTCTCREFDYFKVLCSHAIAAANSRSINPYT 302

Query: 68  ---------------------------WSREDDYEDIQILPPMHIAQVGRCQEIRILYAE 97
                                      W     + +I + PP  + +VGR Q +RI    
Sbjct: 303 LCDEAYTVNSWMLAFAEPIFQVGSSTTWKSSPGFVNIDVQPPKKVVRVGRRQTVRIPSTG 362

The following BLAST results are available for this feature:

BLAST of Bhi11G002219 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11G002219 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11G002219 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889288.1	1.3e-23	47.22	uncharacterized protein LOC120079194 [Benincasa hispida]	[more]
XP_038904344.1	1.2e-08	39.13	uncharacterized protein LOC120090698 [Benincasa hispida]	[more]
XP_022159268.1	1.0e-07	30.71	uncharacterized protein LOC111025678 [Momordica charantia]	[more]
XP_022157875.1	6.6e-07	41.11	uncharacterized protein LOC111024486 [Momordica charantia]	[more]
XP_038895917.1	8.6e-07	26.24	uncharacterized protein LOC120084090 [Benincasa hispida]	[more]

BLAST of Bhi11G002219 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DYC4	4.9e-08	30.71	uncharacterized protein LOC111025678 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DU86	3.2e-07	41.11	uncharacterized protein LOC111024486 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DQY6	9.3e-07	31.91	uncharacterized protein LOC111023509 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DTD4	1.2e-06	28.99	uncharacterized protein LOC111023804 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DWF8	1.6e-06	29.29	uncharacterized protein LOC111025117 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M002219	Bhi11M002219	mRNA