Bhi11G002202 (gene) Wax gourd (B227) v1

Overview


Name	Bhi11G002202
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	WD repeat-containing protein 91-like protein
Location	chr11: 71256857 .. 71257092 (+)
RNA-Seq Expression	Bhi11G002202
Synteny	Bhi11G002202

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAATTACCCAACAAGTTTTGGAAGCAAAAGATGAAGATGGTTTTGCTCTGTCAATGGAGGATGGAGTGGAGGTTCATGATAATGGATTTGAATTGAGTCTCTATGACAAGATGCTTATGTTTGAGGAGCTTAGAAATCGTTGGAGGAAAGTTTTTATCTTTGTCAATGCTTGTGTTCGACTTGCTGTTACTGTTGTTGACATGTATGCTTGTAAGTACTTGGTATGCAGTTGA

mRNA sequence

AAGAAATTACCCAACAAGTTTTGGAAGCAAAAGATGAAGATGGTTTTGCTCTGTCAATGGAGGATGGAGTGGAGGTTCATGATAATGGATTTGAATTGAGTCTCTATGACAAGATGCTTATGTTTGAGGAGCTTAGAAATCGTTGGAGGAAAGTTTTTATCTTTGTCAATGCTTGTGTTCGACTTGCTGTTACTGTTGTTGACATGTATGCTTGTAAGTACTTGGTATGCAGTTGA

Coding sequence (CDS)

AAGAAATTACCCAACAAGTTTTGGAAGCAAAAGATGAAGATGGTTTTGCTCTGTCAATGGAGGATGGAGTGGAGGTTCATGATAATGGATTTGAATTGAGTCTCTATGACAAGATGCTTATGTTTGAGGAGCTTAGAAATCGTTGGAGGAAAGTTTTTATCTTTGTCAATGCTTGTGTTCGACTTGCTGTTACTGTTGTTGACATGTATGCTTGTAAGTACTTGGTATGCAGTTGA

Protein sequence

EITQQVLEAKDEDGFALSMEDGVEVHDNGFELSLYDKMLMFEELRNRWRKVFIFVNACVRLAVTVVDMYACKYLVCS

Homology

[Close]

BLAST of Bhi11G002202 vs. NCBI nr
Match: KAA0042579.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05983.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 3.1e-07
Identity = 34/79 (43.04%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 1   EITQQVLEAKDEDGFALSMEDGVEVHDNGFELSLYDKMLMFEELR--NRWRKVFIFVNAC 60
           EI QQ+L A+++D   LSME G +   +GFELS +++M M ++ R     RKV+I+   C
Sbjct: 143 EICQQILVAQNQDNVGLSMEAGED--SDGFELSFHERMFMLDQFRVVETGRKVYIYFIVC 202

Query: 61  VRLAVTVVDMYACKYLVCS 78
             LA+T +++YACK L+C+
Sbjct: 203 PLLAITAIELYACKCLLCN 219

[Close]

BLAST of Bhi11G002202 vs. NCBI nr
Match: XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])

HSP 1 Score: 60.8 bits (146), Expect = 5.8e-06
Identity = 30/77 (38.96%), Postives = 49/77 (63.64%), Query Frame = 0


Query: 1   EITQQVLEAKDEDGFALSMEDGVEVHDNGFELSLYDKMLMFEELRNRWRKVFIFVNACVR 60
           E+ QQ+L A+++D   L+ME G     +GFE   ++KML+ +  R   RKV+I+   C  
Sbjct: 101 EVCQQILVAQNQDDVDLAMEGG--DFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCAL 160

Query: 61  LAVTVVDMYACKYLVCS 78
           +AVT +++Y  KYL+C+
Sbjct: 161 VAVTAIELYVSKYLLCN 175

[Close]

BLAST of Bhi11G002202 vs. NCBI nr
Match: XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])

HSP 1 Score: 60.5 bits (145), Expect = 7.5e-06
Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 1   EITQQVLEAKDEDGFALSMEDGVEVHDNGFELSLYDKMLMFEELRNRWRKVFIFVNACVR 60
           E+ QQ+L +K++D   LSME G      GFE   ++KMLM +  R   RKV+I+      
Sbjct: 102 ELFQQILVSKNQDDVGLSMETGES--SGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSAL 161

Query: 61  LAVTVVDMYACKYLVCS 78
           LAVT +++Y  KY++C+
Sbjct: 162 LAVTAIELYVSKYVLCN 176

[Close]

BLAST of Bhi11G002202 vs. NCBI nr
Match: KAE8647812.1 (hypothetical protein Csa_000331 [Cucumis sativus])

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-04
Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 1   EITQQVLEAKDEDGFALSMEDGVEVHDNGFELSLYDKMLMFEELR--NRWRKVFIFVNAC 60
           EI QQ+L A+++D   LSME G E  D GFELS +++M M ++       RK +I+   C
Sbjct: 100 EICQQILVAQNQDTVDLSMEGG-ECCD-GFELSFHERMFMLDQFSVVENGRKGYIYFIVC 159

Query: 61  VRLAVTVVDMYACKYLVCS 78
             L +T +++YACK L+C+
Sbjct: 160 ALLVITAIELYACKRLLCN 176

[Close]

BLAST of Bhi11G002202 vs. NCBI nr
Match: XP_022157174.1 (uncharacterized protein LOC111023953 isoform X1 [Momordica charantia] >XP_022157175.1 uncharacterized protein LOC111023953 isoform X1 [Momordica charantia])

HSP 1 Score: 54.3 bits (129), Expect = 5.4e-04
Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 4   QQVLEAKDEDGFALSMEDGVEVHDNGFELSLYDKMLMFEELRNRWRKVFIFVNACVRLAV 63
           Q +LEAKD+D   +   +     D GFEL  Y KMLMF+ LR    KV+I++ A   LAV
Sbjct: 105 QLILEAKDDDDVNVEAGEQYCSDDYGFELGFYRKMLMFDHLRIVGMKVYIYITASALLAV 164

Query: 64  TVVDMYACKYLVC 77
             +++   KY +C
Sbjct: 165 MAIELCVSKYWLC 177

[Close]

BLAST of Bhi11G002202 vs. ExPASy TrEMBL
Match: A0A5A7TMJ1 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00790 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.5e-07
Identity = 34/79 (43.04%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 1   EITQQVLEAKDEDGFALSMEDGVEVHDNGFELSLYDKMLMFEELR--NRWRKVFIFVNAC 60
           EI QQ+L A+++D   LSME G +   +GFELS +++M M ++ R     RKV+I+   C
Sbjct: 143 EICQQILVAQNQDNVGLSMEAGED--SDGFELSFHERMFMLDQFRVVETGRKVYIYFIVC 202

Query: 61  VRLAVTVVDMYACKYLVCS 78
             LA+T +++YACK L+C+
Sbjct: 203 PLLAITAIELYACKCLLCN 219

[Close]

BLAST of Bhi11G002202 vs. ExPASy TrEMBL
Match: A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.8e-06
Identity = 30/77 (38.96%), Postives = 49/77 (63.64%), Query Frame = 0


Query: 1   EITQQVLEAKDEDGFALSMEDGVEVHDNGFELSLYDKMLMFEELRNRWRKVFIFVNACVR 60
           E+ QQ+L A+++D   L+ME G     +GFE   ++KML+ +  R   RKV+I+   C  
Sbjct: 101 EVCQQILVAQNQDDVDLAMEGG--DFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCAL 160

Query: 61  LAVTVVDMYACKYLVCS 78
           +AVT +++Y  KYL+C+
Sbjct: 161 VAVTAIELYVSKYLLCN 175

[Close]

BLAST of Bhi11G002202 vs. ExPASy TrEMBL
Match: A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.6e-06
Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 1   EITQQVLEAKDEDGFALSMEDGVEVHDNGFELSLYDKMLMFEELRNRWRKVFIFVNACVR 60
           E+ QQ+L +K++D   LSME G      GFE   ++KMLM +  R   RKV+I+      
Sbjct: 102 ELFQQILVSKNQDDVGLSMETGES--SGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSAL 161

Query: 61  LAVTVVDMYACKYLVCS 78
           LAVT +++Y  KY++C+
Sbjct: 162 LAVTAIELYVSKYVLCN 176

[Close]

BLAST of Bhi11G002202 vs. ExPASy TrEMBL
Match: A0A0A0KJZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139810 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.3e-05
Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 1   EITQQVLEAKDEDGFALSMEDGVEVHDNGFELSLYDKMLMFEELR--NRWRKVFIFVNAC 60
           EI QQ+L A+++D   LSME G E  D GFELS +++M M ++       RK +I+   C
Sbjct: 177 EICQQILVAQNQDTVDLSMEGG-ECCD-GFELSFHERMFMLDQFSVVENGRKGYIYFIVC 236

Query: 61  VRLAVTVVDMYACKYLVCS 78
             L +T +++YACK L+C+
Sbjct: 237 ALLVITAIELYACKRLLCN 253

[Close]

BLAST of Bhi11G002202 vs. ExPASy TrEMBL
Match: A0A6J1DSD4 (uncharacterized protein LOC111023953 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.6e-04
Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 4   QQVLEAKDEDGFALSMEDGVEVHDNGFELSLYDKMLMFEELRNRWRKVFIFVNACVRLAV 63
           Q +LEAKD+D   +   +     D GFEL  Y KMLMF+ LR    KV+I++ A   LAV
Sbjct: 105 QLILEAKDDDDVNVEAGEQYCSDDYGFELGFYRKMLMFDHLRIVGMKVYIYITASALLAV 164

Query: 64  TVVDMYACKYLVC 77
             +++   KY +C
Sbjct: 165 MAIELCVSKYWLC 177

The following BLAST results are available for this feature:

BLAST of Bhi11G002202 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11G002202 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11G002202 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042579.1	3.1e-07	43.04	WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598...	[more]
XP_022157176.1	5.8e-06	38.96	uncharacterized protein LOC111023953 isoform X2 [Momordica charantia]	[more]
XP_022157182.1	7.5e-06	40.26	uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha...	[more]
KAE8647812.1	1.1e-04	41.77	hypothetical protein Csa_000331 [Cucumis sativus]	[more]
XP_022157174.1	5.4e-04	41.10	uncharacterized protein LOC111023953 isoform X1 [Momordica charantia] >XP_022157...	[more]

BLAST of Bhi11G002202 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TMJ1	1.5e-07	43.04	WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1DX74	2.8e-06	38.96	uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DSQ0	3.6e-06	40.26	uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A0A0KJZ3	5.3e-05	41.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139810 PE=4 SV=1	[more]
A0A6J1DSD4	2.6e-04	41.10	uncharacterized protein LOC111023953 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M002202	Bhi11M002202	mRNA