Bhi11G001237 (gene) Wax gourd (B227) v1

Overview
NameBhi11G001237
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Locationchr11: 41897334 .. 41897675 (-)
RNA-Seq ExpressionBhi11G001237
SyntenyBhi11G001237
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGACTAAAAGGCATTTTGTGAGGCCGATTGATCAACACATTTTTAAAGTTGTTGGTATTCACCTTAGTGGAGTTGTTGACTTGAATGCGCGTATGTGTTCGTGCAAGGATTTTGATTATTACGACATGCCATGCTCCCATGCGATTGCAGCAGTCCGTTACCGGAACATTGATCCATGCACACTTTGTTCCCCTTACTACAATATTCAGGCTATTTACGGATCATATGGAGAACCTATTTTCCCTTTAGGCTCTATTTCAGAAGGGCCTCAGGGGGATGATTACGAAGACATCCAAATATTGTCGCCGATTCGTGTTGCTCAAGTTGGCCTCCACTAG

mRNA sequence

ATGACGACTAAAAGGCATTTTGTGAGGCCGATTGATCAACACATTTTTAAAGTTGTTGGTATTCACCTTAGTGGAGTTGTTGACTTGAATGCGCGTATGTGTTCGTGCAAGGATTTTGATTATTACGACATGCCATGCTCCCATGCGATTGCAGCAGTCCGTTACCGGAACATTGATCCATGCACACTTTGTTCCCCTTACTACAATATTCAGGCTATTTACGGATCATATGGAGAACCTATTTTCCCTTTAGGCTCTATTTCAGAAGGGCCTCAGGGGGATGATTACGAAGACATCCAAATATTGTCGCCGATTCGTGTTGCTCAAGTTGGCCTCCACTAG

Coding sequence (CDS)

ATGACGACTAAAAGGCATTTTGTGAGGCCGATTGATCAACACATTTTTAAAGTTGTTGGTATTCACCTTAGTGGAGTTGTTGACTTGAATGCGCGTATGTGTTCGTGCAAGGATTTTGATTATTACGACATGCCATGCTCCCATGCGATTGCAGCAGTCCGTTACCGGAACATTGATCCATGCACACTTTGTTCCCCTTACTACAATATTCAGGCTATTTACGGATCATATGGAGAACCTATTTTCCCTTTAGGCTCTATTTCAGAAGGGCCTCAGGGGGATGATTACGAAGACATCCAAATATTGTCGCCGATTCGTGTTGCTCAAGTTGGCCTCCACTAG

Protein sequence

MTTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSPIRVAQVGLH
Homology
BLAST of Bhi11G001237 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 47.0 bits (110), Expect = 1.2e-05
Identity = 20/69 (28.99%), Postives = 32/69 (46.38%), Query Frame = 0

Query: 24  SGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFP 83
           SG+V LN   C+C +F     PC HA+A      I+P       Y ++  + +Y     P
Sbjct: 649 SGIVQLNDTTCTCGEFQKNKFPCLHALAVCDELKINPLQYVDDCYTVERYHKTYSAKFSP 708

Query: 84  LGSISEGPQ 93
           +  +S  P+
Sbjct: 709 VPELSAWPE 717

BLAST of Bhi11G001237 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase )

HSP 1 Score: 46.6 bits (109), Expect = 1.5e-05
Identity = 24/92 (26.09%), Postives = 41/92 (44.57%), Query Frame = 0

Query: 3   TKRHFVRPIDQHIFKVVGIHLSG--VVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDP 62
           T  + V P+D + F+V      G  +V L+   C+C DF  Y  PC HA+A  +    +P
Sbjct: 619 TYSYIVTPLDNNAFQVATALDKGECIVQLSDCSCTCGDFQRYKFPCLHALAVCKKLKFNP 678

Query: 63  CTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQ 93
                  Y ++ +  +Y      +  +S  P+
Sbjct: 679 LQYVDDCYTLERLKRTYATIFSHVPEMSAWPE 710

BLAST of Bhi11G001237 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 45.8 bits (107), Expect = 2.6e-05
Identity = 18/67 (26.87%), Postives = 30/67 (44.78%), Query Frame = 0

Query: 26  VVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLCSPYYNIQAIYGSYGEPIFPLG 85
           +V LN   C+C+ F  Y  PC HA+A      I+P       Y ++    +Y     P+ 
Sbjct: 635 IVQLNVSTCTCRKFQSYKFPCLHALAVFEKLKINPLQYVDECYTVEQYCKTYAATFSPVP 694

Query: 86  SISEGPQ 93
            ++  P+
Sbjct: 695 DVAAWPE 701

BLAST of Bhi11G001237 vs. NCBI nr
Match: XP_038904344.1 (uncharacterized protein LOC120090698 [Benincasa hispida])

HSP 1 Score: 245.7 bits (626), Expect = 1.9e-61
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0

Query: 1   MTTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDP 60
           MTTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDP
Sbjct: 192 MTTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDP 251

Query: 61  CTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSPIRVAQVGLH 114
           CTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSPIRVAQVGLH
Sbjct: 252 CTLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSPIRVAQVGLH 304

BLAST of Bhi11G001237 vs. NCBI nr
Match: XP_038889288.1 (uncharacterized protein LOC120079194 [Benincasa hispida])

HSP 1 Score: 165.6 bits (418), Expect = 2.4e-37
Identity = 76/111 (68.47%), Postives = 87/111 (78.38%), Query Frame = 0

Query: 3   TKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCT 62
           ++RHFVRPID HIF+V+  HLSGVV LN   C+CKDF+YYDMPCSH IAA RYRNIDP T
Sbjct: 8   SRRHFVRPIDLHIFEVIDNHLSGVVVLNVCTCTCKDFNYYDMPCSHVIAATRYRNIDPYT 67

Query: 63  LCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSPIRVAQVGLH 114
            CS  YNIQ +YG Y +PIF +G I E P+GDDY+DIQIL PI V QVG H
Sbjct: 68  QCSLCYNIQVVYGLYAKPIFLVGPILEWPRGDDYKDIQILPPICVTQVGHH 118

BLAST of Bhi11G001237 vs. NCBI nr
Match: XP_038904373.1 (uncharacterized protein LOC120090731 [Benincasa hispida])

HSP 1 Score: 114.4 bits (285), Expect = 6.5e-22
Identity = 52/107 (48.60%), Postives = 72/107 (67.29%), Query Frame = 0

Query: 5   RHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLC 64
           R+ VRPIDQ+ F+V+   L G V+++ R C+C+ FDYY +PCSHAIAA R +NIDP +LC
Sbjct: 13  RYEVRPIDQYEFEVINGGLEGRVNIHTRTCTCRKFDYYKIPCSHAIAACRVQNIDPTSLC 72

Query: 65  SPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSPIRVAQVG 112
           S  Y+I AI  +Y EP+  LG   E  Q   + D++ L P RV ++G
Sbjct: 73  SWVYSIDAILAAYAEPVRSLGHFLEWKQSSAFVDVETLPPKRVTRIG 119

BLAST of Bhi11G001237 vs. NCBI nr
Match: XP_038890792.1 (uncharacterized protein LOC120080248 [Benincasa hispida])

HSP 1 Score: 110.5 bits (275), Expect = 9.3e-21
Identity = 52/103 (50.49%), Postives = 69/103 (66.99%), Query Frame = 0

Query: 5   RHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTLC 64
           +H VRPIDQH F+V+   L G V+++AR C+C+ FDYY++ CSHAIAA R RNID  + C
Sbjct: 13  KHEVRPIDQHEFEVIDGGLGGRVNIHARTCTCRKFDYYEISCSHAIAACRVRNIDSTSFC 72

Query: 65  SPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSPIRV 108
           S  Y+I A+  +Y EPI PLG   E  Q   + D++ L P RV
Sbjct: 73  SWVYSIDAMLAAYAEPIRPLGHFLEWKQSLAFVDVETLPPKRV 115

BLAST of Bhi11G001237 vs. NCBI nr
Match: XP_022159268.1 (uncharacterized protein LOC111025678 [Momordica charantia])

HSP 1 Score: 108.2 bits (269), Expect = 4.6e-20
Identity = 51/110 (46.36%), Postives = 70/110 (63.64%), Query Frame = 0

Query: 2   TTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPC 61
           + +RH V  IDQ  F+V   +L G+VDLNA MCSC++FDY+ +PCSHAIAA   RNI+P 
Sbjct: 365 SARRHVVDNIDQFHFQVRDGNLDGIVDLNAMMCSCREFDYFKIPCSHAIAAATMRNINPY 424

Query: 62  TLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSPIRVAQVG 112
           +LC   Y   +   +Y EPIFP+G IS      ++ +I +  P  V +VG
Sbjct: 425 SLCDEAYTTNSWILAYAEPIFPVGHISTWNSSPEFVNIPVEPPKTVPRVG 474

BLAST of Bhi11G001237 vs. ExPASy TrEMBL
Match: A0A6J1DYC4 (uncharacterized protein LOC111025678 OS=Momordica charantia OX=3673 GN=LOC111025678 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.2e-20
Identity = 51/110 (46.36%), Postives = 70/110 (63.64%), Query Frame = 0

Query: 2   TTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPC 61
           + +RH V  IDQ  F+V   +L G+VDLNA MCSC++FDY+ +PCSHAIAA   RNI+P 
Sbjct: 365 SARRHVVDNIDQFHFQVRDGNLDGIVDLNAMMCSCREFDYFKIPCSHAIAAATMRNINPY 424

Query: 62  TLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSPIRVAQVG 112
           +LC   Y   +   +Y EPIFP+G IS      ++ +I +  P  V +VG
Sbjct: 425 SLCDEAYTTNSWILAYAEPIFPVGHISTWNSSPEFVNIPVEPPKTVPRVG 474

BLAST of Bhi11G001237 vs. ExPASy TrEMBL
Match: A0A6J1DQV1 (uncharacterized protein LOC111022299 OS=Momordica charantia OX=3673 GN=LOC111022299 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.8e-20
Identity = 46/108 (42.59%), Postives = 70/108 (64.81%), Query Frame = 0

Query: 4   KRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCTL 63
           ++H +RPID + ++V   +    V+LN++ C+CK FDYY +PCSHA+ A  +RN+   TL
Sbjct: 133 RQHTIRPIDNYEYEVHDGNSKVRVNLNSKSCTCKQFDYYQIPCSHAVVATMHRNVSIYTL 192

Query: 64  CSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSPIRVAQVG 112
           CSP Y ++ +  +Y EPI+PLG   + P  DD+ +  I  P  VA+VG
Sbjct: 193 CSPKYKLETLLNTYAEPIYPLGDEEDWPLPDDFVEYTIEPPKFVARVG 240

BLAST of Bhi11G001237 vs. ExPASy TrEMBL
Match: A0A6J1DQ99 (uncharacterized protein LOC111023235 OS=Momordica charantia OX=3673 GN=LOC111023235 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.5e-19
Identity = 48/109 (44.04%), Postives = 70/109 (64.22%), Query Frame = 0

Query: 3   TKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPCT 62
           ++R+ V+P+D  +F V    L   VDLNAR C+C +F Y  +PCSHAIAA R++NI+  T
Sbjct: 223 SRRYTVKPVDWCMFHVEDDGLDRTVDLNARTCTCMEFQYMGIPCSHAIAAARHKNINCHT 282

Query: 63  LCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSPIRVAQVG 112
           L  P YN+ ++ G+Y EPI P+G +SE  +  DY+ I +  P  V + G
Sbjct: 283 LIDPCYNVDSLIGAYAEPILPVGHMSEWKRPADYQPIPVQPPGLVKRAG 331

BLAST of Bhi11G001237 vs. ExPASy TrEMBL
Match: A0A6J1CVL4 (uncharacterized protein LOC111015181 OS=Momordica charantia OX=3673 GN=LOC111015181 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.9e-19
Identity = 48/110 (43.64%), Postives = 69/110 (62.73%), Query Frame = 0

Query: 2   TTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPC 61
           + +RH V  IDQ  F+V   +L G+VDLNA  C+C++FDY+ +PCSHAIAA   RNI+P 
Sbjct: 383 SVRRHVVDNIDQFHFQVQDDNLDGIVDLNAMTCNCREFDYFKIPCSHAIAAATMRNINPY 442

Query: 62  TLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSPIRVAQVG 112
           +LC   Y   +   +Y EPIFP+G +S      ++ +I +  P  V +VG
Sbjct: 443 SLCDEAYTTNSWILAYAEPIFPVGHVSTWNSSPEFVNIPVEPPKTVPRVG 492

BLAST of Bhi11G001237 vs. ExPASy TrEMBL
Match: A0A6J1CYE7 (uncharacterized protein LOC111015601 OS=Momordica charantia OX=3673 GN=LOC111015601 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.5e-19
Identity = 49/110 (44.55%), Postives = 68/110 (61.82%), Query Frame = 0

Query: 2   TTKRHFVRPIDQHIFKVVGIHLSGVVDLNARMCSCKDFDYYDMPCSHAIAAVRYRNIDPC 61
           + +RH V  IDQ  F+V   +L G+VDLNA  CSC++FDY+ +PCSHAIAA   RNI+P 
Sbjct: 306 SARRHVVDNIDQFHFQVRDDNLDGIVDLNAMTCSCREFDYFKIPCSHAIAAATMRNINPY 365

Query: 62  TLCSPYYNIQAIYGSYGEPIFPLGSISEGPQGDDYEDIQILSPIRVAQVG 112
           +LC   Y       +Y EPIFP+G +S      ++ +I +  P  V +VG
Sbjct: 366 SLCDEAYTTNFWILAYAEPIFPVGHVSTWNSSPEFVNIPVEPPKTVPRVG 415

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G49920.11.2e-0528.99MuDR family transposase [more]
AT1G64255.11.5e-0526.09MuDR family transposase [more]
AT1G64260.12.6e-0526.87MuDR family transposase [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038904344.11.9e-61100.00uncharacterized protein LOC120090698 [Benincasa hispida][more]
XP_038889288.12.4e-3768.47uncharacterized protein LOC120079194 [Benincasa hispida][more]
XP_038904373.16.5e-2248.60uncharacterized protein LOC120090731 [Benincasa hispida][more]
XP_038890792.19.3e-2150.49uncharacterized protein LOC120080248 [Benincasa hispida][more]
XP_022159268.14.6e-2046.36uncharacterized protein LOC111025678 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6J1DYC42.2e-2046.36uncharacterized protein LOC111025678 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DQV13.8e-2042.59uncharacterized protein LOC111022299 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DQ991.5e-1944.04uncharacterized protein LOC111023235 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1CVL41.9e-1943.64uncharacterized protein LOC111015181 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1CYE72.5e-1944.55uncharacterized protein LOC111015601 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006564Zinc finger, PMZ-typeSMARTSM0057526again6coord: 32..59
e-value: 4.8E-5
score: 32.8
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 27..55
e-value: 4.6E-7
score: 29.4
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 19..57
score: 10.051597

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M001237Bhi11M001237mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding