Bhi11G000987 (gene) Wax gourd (B227) v1

Overview


Name	Bhi11G000987
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr11: 34618156 .. 34618379 (+)
RNA-Seq Expression	Bhi11G000987
Synteny	Bhi11G000987

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATAAGGAGTCGGGAGTACCAATCCTGAAAGGCCAGCTCAAAGATGGGCTATACCAGTTGGAGGATGTCAACCAGTCTATAAATAATGCATCACTTTCTTCAAGATTGTCAAATGCTCGCTTGACTGCTCCATCCAAAGAGTTCTCACGTCAGCCTGCTTTTCAAACCAGCAAGACAGTAACCACAATGCTTCTCCACAGGCGACTTGGCCATCCATCCCCTAA

mRNA sequence

GATAAGGAGTCGGGAGTACCAATCCTGAAAGGCCAGCTCAAAGATGGGCTATACCAGTTGGAGGATGTCAACCAGTCTATAAATAATGCATCACTTTCTTCAAGATTGTCAAATGCTCGCTTGACTGCTCCATCCAAAGAGTTCTCACGTCAGCCTGCTTTTCAAACCAGCAAGACAGCGACTTGGCCATCCATCCCCTAA

Coding sequence (CDS)

GATAAGGAGTCGGGAGTACCAATCCTGAAAGGCCAGCTCAAAGATGGGCTATACCAGTTGGAGGATGTCAACCAGTCTATAAATAATGCATCACTTTCTTCAAGATTGTCAAATGCTCGCTTGACTGCTCCATCCAAAGAGTTCTCACGTCAGCCTGCTTTTCAAACCAGCAAGACAGCGACTTGGCCATCCATCCCCTAA

Protein sequence

DKESGVPILKGQLKDGLYQLEDVNQSINNASLSSRLSNARLTAPSKEFSRQPAFQTSKTATWPSIP

Homology

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BLAST of Bhi11G000987 vs. NCBI nr
Match: XP_038895842.1 (uncharacterized protein LOC120084010 [Benincasa hispida])

HSP 1 Score: 59.7 bits (143), Expect = 1.1e-05
Identity = 34/59 (57.63%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 1   DKESGVPILKGQLKDGLYQLEDVNQSINNASLSSRLSNARLTAPSKEFSRQPAFQTSKT 60
           DKESGV +LKG+LKDGLYQL+ V+  INNA   SRL  A LT  S   S  P F T+ T
Sbjct: 175 DKESGVALLKGKLKDGLYQLDIVSSLINNALTRSRLPGASLTTQSSLSSSLPVFTTNIT 233

The following BLAST results are available for this feature:

BLAST of Bhi11G000987 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11G000987 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11G000987 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895842.1	1.1e-05	57.63	uncharacterized protein LOC120084010 [Benincasa hispida]	[more]

BLAST of Bhi11G000987 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000987	Bhi11M000987	mRNA