Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGAACCAGAGTCTTTCTATACCTATAAATGTGGCAAAAAGCTTTTACTCTATTTTCCTCTACCAAGAACTCCTATACACTTTTGGGATAATTTAGCAGAAGCTTGAAGATATCAAAAGTCATGAACAAGTTCAAGAAATCAGAAATTCTAGTGCTTTTAGGCCTCACAGTGCTTCTAGTAATAACTCCTCTTCTTTCTTCATCCCTAAGACCAACATATCTTTACTTCATCTTCAACCTCCTCATCATTGCCCTTGGAGCACAAGCTGGCCTTCTCTCATCAGCTTTCCCAAATAATGATCCTCCTGATCAAGACAAGACCAACAAGCTTTCTTTAACTTTATCCGAAACCGTGGAAAGCTCCGCCAAGAAGCACCGGGCTTTGGAGAAGGCTCACTCCGACGAAAATCCGGCTGGCAATGTCAAGATGGAATCTCTTAAGAAGTGTCCCTCTGCTTCGAGTATTTTCTATATCGGAGAGGGCGATAGCGAGGCGGAGGACACGACAGCGGTCGAGGACGTGGAAGAGGAGGTTGGCGGGGGCGGAAATAATGAGCAAGAATTGTTTGCTCAAGCTGAGACGTTTATTGGGAACTTCTATAAGCAGTTGAAGATGCAGAAAGAAGAGTCTTGGAAAAACATTCATGGTTTCTATCAAAAACGCTCTTGAGTTCTATTCTTCTTTTCTCTTTGATCCATCAAGTTATTTGGGATGTGAATGAAATTCTTGAAATATGTAAAACAAAAACAAAACGGAAAGTTCTTGTAGGTTTGTACAGTTTAATCCAGC
mRNA sequence
CAGAACCAGAGTCTTTCTATACCTATAAATGTGGCAAAAAGCTTTTACTCTATTTTCCTCTACCAAGAACTCCTATACACTTTTGGGATAATTTAGCAGAAGCTTGAAGATATCAAAAGTCATGAACAAGTTCAAGAAATCAGAAATTCTAGTGCTTTTAGGCCTCACAGTGCTTCTAGTAATAACTCCTCTTCTTTCTTCATCCCTAAGACCAACATATCTTTACTTCATCTTCAACCTCCTCATCATTGCCCTTGGAGCACAAGCTGGCCTTCTCTCATCAGCTTTCCCAAATAATGATCCTCCTGATCAAGACAAGACCAACAAGCTTTCTTTAACTTTATCCGAAACCGTGGAAAGCTCCGCCAAGAAGCACCGGGCTTTGGAGAAGGCTCACTCCGACGAAAATCCGGCTGGCAATGTCAAGATGGAATCTCTTAAGAAGTGTCCCTCTGCTTCGAGTATTTTCTATATCGGAGAGGGCGATAGCGAGGCGGAGGACACGACAGCGGTCGAGGACGTGGAAGAGGAGGTTGGCGGGGGCGGAAATAATGAGCAAGAATTGTTTGCTCAAGCTGAGACGTTTATTGGGAACTTCTATAAGCAGTTGAAGATGCAGAAAGAAGAGTCTTGGAAAAACATTCATGGTTTCTATCAAAAACGCTCTTGAGTTCTATTCTTCTTTTCTCTTTGATCCATCAAGTTATTTGGGATGTGAATGAAATTCTTGAAATATGTAAAACAAAAACAAAACGGAAAGTTCTTGTAGGTTTGTACAGTTTAATCCAGC
Coding sequence (CDS)
ATGAACAAGTTCAAGAAATCAGAAATTCTAGTGCTTTTAGGCCTCACAGTGCTTCTAGTAATAACTCCTCTTCTTTCTTCATCCCTAAGACCAACATATCTTTACTTCATCTTCAACCTCCTCATCATTGCCCTTGGAGCACAAGCTGGCCTTCTCTCATCAGCTTTCCCAAATAATGATCCTCCTGATCAAGACAAGACCAACAAGCTTTCTTTAACTTTATCCGAAACCGTGGAAAGCTCCGCCAAGAAGCACCGGGCTTTGGAGAAGGCTCACTCCGACGAAAATCCGGCTGGCAATGTCAAGATGGAATCTCTTAAGAAGTGTCCCTCTGCTTCGAGTATTTTCTATATCGGAGAGGGCGATAGCGAGGCGGAGGACACGACAGCGGTCGAGGACGTGGAAGAGGAGGTTGGCGGGGGCGGAAATAATGAGCAAGAATTGTTTGCTCAAGCTGAGACGTTTATTGGGAACTTCTATAAGCAGTTGAAGATGCAGAAAGAAGAGTCTTGGAAAAACATTCATGGTTTCTATCAAAAACGCTCTTGA
Protein sequence
MNKFKKSEILVLLGLTVLLVITPLLSSSLRPTYLYFIFNLLIIALGAQAGLLSSAFPNNDPPDQDKTNKLSLTLSETVESSAKKHRALEKAHSDENPAGNVKMESLKKCPSASSIFYIGEGDSEAEDTTAVEDVEEEVGGGGNNEQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKRS
Homology
BLAST of Bhi11G000455 vs. NCBI nr
Match:
KAA0055857.1 (putative LIM and calponin domains-containing protein 1 [Cucumis melo var. makuwa] >TYK24081.1 putative LIM and calponin domains-containing protein 1 [Cucumis melo var. makuwa])
HSP 1 Score: 276.6 bits (706), Expect = 1.6e-70
Identity = 158/189 (83.60%), Postives = 165/189 (87.30%), Query Frame = 0
Query: 1 MNKFKKSEILVLLGLTVLLVITPLLSSSLRPTYLYFIFNLLIIALGAQAGLLSSAFPNND 60
MNKFKKSEILVLLGLT+LLVITPLLSSSLRPTYLYFIFNLLIIALG QAGLL N+
Sbjct: 2 MNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLL-----NDP 61
Query: 61 PPD-QDKTNKLSLTLSETVESSA-----KKHRALEKAHSDENPAGNVKMESLKKCPSASS 120
PPD QDKTNKLSLT ETV SS KKHRALEKAHSD+ +GNVKMESLKKCPSASS
Sbjct: 62 PPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISSGNVKMESLKKCPSASS 121
Query: 121 IFYIGEGDSEAEDTTAVEDVEEEV--GGGGNNEQELFAQAETFIGNFYKQLKMQKEESWK 180
IFYIGEGDSEAE+TT +ED+EEEV GGG NN QELFAQAETFIGNFYKQLKMQKEESWK
Sbjct: 122 IFYIGEGDSEAEETTGIEDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWK 181
Query: 181 NIHGFYQKR 182
NIHGFYQKR
Sbjct: 182 NIHGFYQKR 185
BLAST of Bhi11G000455 vs. NCBI nr
Match:
KGN56109.1 (hypothetical protein Csa_011766 [Cucumis sativus])
HSP 1 Score: 266.5 bits (680), Expect = 1.6e-67
Identity = 156/191 (81.68%), Postives = 163/191 (85.34%), Query Frame = 0
Query: 1 MNKFKKSEILVLLGLTVLLVITPLLSSSLRPTYLYFIFNLLIIALGAQAGLLSSAFPNND 60
MNKFKKSEI+VLL LT+LLVITPLLSSSLRPTYLYFIFNLLIIALG QAGLL N+
Sbjct: 2 MNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLL-----NDP 61
Query: 61 PPD-QDKTNKLSLTLSETVESSA-----KKHRALEKAHSDENPAGNVKMESLKKCPSASS 120
PPD QDKTNKLSLT ETV SS KKHRALEKAHSD+ +GNVKMESLKKCPSASS
Sbjct: 62 PPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISSGNVKMESLKKCPSASS 121
Query: 121 IFYIGEGDSEAEDTT-AVEDVEEEV---GGGGNNEQELFAQAETFIGNFYKQLKMQKEES 180
IFYIGEGDSEAE+TT +ED EEEV GGG NN QELFAQAETFIGNFYKQLKMQKEES
Sbjct: 122 IFYIGEGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEES 181
Query: 181 WKNIHGFYQKR 182
WKNIHGFYQKR
Sbjct: 182 WKNIHGFYQKR 187
BLAST of Bhi11G000455 vs. NCBI nr
Match:
KAG6577458.1 (hypothetical protein SDJN03_25032, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 188.3 bits (477), Expect = 5.7e-44
Identity = 110/182 (60.44%), Postives = 134/182 (73.63%), Query Frame = 0
Query: 1 MNKFKKSEILVLLGLTVLLVITPLLSSSLRPTYLYFIFNLLIIALGAQAGLLSSAFPNND 60
M++ K+SE++++L LT+LL+ITPLLSSSLRPTYLYF+FNLLI+ GLLSSAFPN
Sbjct: 1 MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLIL------GLLSSAFPN-- 60
Query: 61 PPDQDKTNKLSLTLSETVESSAKKHRALEKAHSDENPAGNVKMESLKKCPSASSIFYIGE 120
N S + + +SA HRALEKAHSD P N K+ESL KCPSAS+IF+IG+
Sbjct: 61 -------NAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPSASTIFFIGD 120
Query: 121 GDSEAEDTTAVEDVEEEVGGG--GNNEQELFAQAETFIGNFYKQLKMQKEESWKNIHGFY 180
GDS E+ EEE GG G N Q+LFAQAETFIGNFYKQL+MQK+ESWKN+HGFY
Sbjct: 121 GDS--------EEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVHGFY 159
BLAST of Bhi11G000455 vs. NCBI nr
Match:
KAG7015529.1 (hypothetical protein SDJN02_23165, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 177.6 bits (449), Expect = 1.0e-40
Identity = 105/177 (59.32%), Postives = 128/177 (72.32%), Query Frame = 0
Query: 1 MNKFKKSEILVLLGLTVLLVITPLLSSSLRPTYLYFIFNLLIIALGAQAGLLSSAFPNND 60
M++ K+SE++++L LT+LL+ITPLLSSSLRPTYLYF+FNLLI+ GLLSSAFPN
Sbjct: 1 MSRLKRSEVVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLIL------GLLSSAFPN-- 60
Query: 61 PPDQDKTNKLSLTLSETVESSAKKHRALEKAHSDENPAGNVKMESLKKCPSASSIFYIGE 120
N S + + +SA HRALEKAHSD P N K+ESL KCPS S+IF+IG+
Sbjct: 61 -------NAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPSPSTIFFIGD 120
Query: 121 GDSEAEDTTAVEDVEEEVGGG--GNNEQELFAQAETFIGNFYKQLKMQKEESWKNIH 176
GDS E+ EEE GG G N Q+LFAQAETFIGNFYKQL+MQK+ESWKN+H
Sbjct: 121 GDS--------EEAEEEASGGAAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNVH 154
BLAST of Bhi11G000455 vs. NCBI nr
Match:
XP_022932284.1 (uncharacterized protein LOC111438634 [Cucurbita moschata])
HSP 1 Score: 172.9 bits (437), Expect = 2.5e-39
Identity = 109/187 (58.29%), Postives = 131/187 (70.05%), Query Frame = 0
Query: 1 MNKFKKSEILVLLGLTVLLVITPLLSSSLRPTYLYFIFNLLIIALGAQAGLLSSAFPNND 60
M++ K+SEI+++L LT+LL+ITPLLSSSLRPTYLYF+FNLLI+ GLLSSAFPN
Sbjct: 1 MSRLKRSEIVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLIL------GLLSSAFPN-- 60
Query: 61 PPDQDKTNKLSLTLSETVESSAKKHRALEKAHSDENPAGNVKMESLKKCPSASSIFYIGE 120
N S + + +SA HRALEKAHSD P N K+ESL KCPSAS+IF+IG+
Sbjct: 61 -------NAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPSASTIFFIGD 120
Query: 121 GDSEAEDTTAVEDVEEEV--GGGGNNEQELFAQAETFIGNFYKQLKMQKEESWKN---IH 180
DS E+ EEE GG G N Q+LFAQAETFIGNFYKQL+MQK+ESWKN +
Sbjct: 121 VDS--------EEAEEEASGGGAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNKTKME 164
Query: 181 GFYQKRS 183
GF Q S
Sbjct: 181 GFVQFNS 164
BLAST of Bhi11G000455 vs. ExPASy TrEMBL
Match:
A0A5D3DK86 (Putative LIM and calponin domains-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00520 PE=4 SV=1)
HSP 1 Score: 276.6 bits (706), Expect = 7.7e-71
Identity = 158/189 (83.60%), Postives = 165/189 (87.30%), Query Frame = 0
Query: 1 MNKFKKSEILVLLGLTVLLVITPLLSSSLRPTYLYFIFNLLIIALGAQAGLLSSAFPNND 60
MNKFKKSEILVLLGLT+LLVITPLLSSSLRPTYLYFIFNLLIIALG QAGLL N+
Sbjct: 2 MNKFKKSEILVLLGLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLL-----NDP 61
Query: 61 PPD-QDKTNKLSLTLSETVESSA-----KKHRALEKAHSDENPAGNVKMESLKKCPSASS 120
PPD QDKTNKLSLT ETV SS KKHRALEKAHSD+ +GNVKMESLKKCPSASS
Sbjct: 62 PPDHQDKTNKLSLTSPETVASSTETSPLKKHRALEKAHSDKISSGNVKMESLKKCPSASS 121
Query: 121 IFYIGEGDSEAEDTTAVEDVEEEV--GGGGNNEQELFAQAETFIGNFYKQLKMQKEESWK 180
IFYIGEGDSEAE+TT +ED+EEEV GGG NN QELFAQAETFIGNFYKQLKMQKEESWK
Sbjct: 122 IFYIGEGDSEAEETTGIEDMEEEVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEESWK 181
Query: 181 NIHGFYQKR 182
NIHGFYQKR
Sbjct: 182 NIHGFYQKR 185
BLAST of Bhi11G000455 vs. ExPASy TrEMBL
Match:
A0A0A0L509 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G074480 PE=4 SV=1)
HSP 1 Score: 266.5 bits (680), Expect = 7.9e-68
Identity = 156/191 (81.68%), Postives = 163/191 (85.34%), Query Frame = 0
Query: 1 MNKFKKSEILVLLGLTVLLVITPLLSSSLRPTYLYFIFNLLIIALGAQAGLLSSAFPNND 60
MNKFKKSEI+VLL LT+LLVITPLLSSSLRPTYLYFIFNLLIIALG QAGLL N+
Sbjct: 2 MNKFKKSEIVVLLSLTILLVITPLLSSSLRPTYLYFIFNLLIIALGVQAGLL-----NDP 61
Query: 61 PPD-QDKTNKLSLTLSETVESSA-----KKHRALEKAHSDENPAGNVKMESLKKCPSASS 120
PPD QDKTNKLSLT ETV SS KKHRALEKAHSD+ +GNVKMESLKKCPSASS
Sbjct: 62 PPDHQDKTNKLSLTSPETVASSTETSALKKHRALEKAHSDKISSGNVKMESLKKCPSASS 121
Query: 121 IFYIGEGDSEAEDTT-AVEDVEEEV---GGGGNNEQELFAQAETFIGNFYKQLKMQKEES 180
IFYIGEGDSEAE+TT +ED EEEV GGG NN QELFAQAETFIGNFYKQLKMQKEES
Sbjct: 122 IFYIGEGDSEAEETTGTIEDGEEEVVVGGGGNNNGQELFAQAETFIGNFYKQLKMQKEES 181
Query: 181 WKNIHGFYQKR 182
WKNIHGFYQKR
Sbjct: 182 WKNIHGFYQKR 187
BLAST of Bhi11G000455 vs. ExPASy TrEMBL
Match:
A0A6J1EWK2 (uncharacterized protein LOC111438634 OS=Cucurbita moschata OX=3662 GN=LOC111438634 PE=4 SV=1)
HSP 1 Score: 172.9 bits (437), Expect = 1.2e-39
Identity = 109/187 (58.29%), Postives = 131/187 (70.05%), Query Frame = 0
Query: 1 MNKFKKSEILVLLGLTVLLVITPLLSSSLRPTYLYFIFNLLIIALGAQAGLLSSAFPNND 60
M++ K+SEI+++L LT+LL+ITPLLSSSLRPTYLYF+FNLLI+ GLLSSAFPN
Sbjct: 1 MSRLKRSEIVLVLCLTLLLLITPLLSSSLRPTYLYFVFNLLIL------GLLSSAFPN-- 60
Query: 61 PPDQDKTNKLSLTLSETVESSAKKHRALEKAHSDENPAGNVKMESLKKCPSASSIFYIGE 120
N S + + +SA HRALEKAHSD P N K+ESL KCPSAS+IF+IG+
Sbjct: 61 -------NAHSPNTTPSPHTSANNHRALEKAHSDNIPPPNPKIESLNKCPSASTIFFIGD 120
Query: 121 GDSEAEDTTAVEDVEEEV--GGGGNNEQELFAQAETFIGNFYKQLKMQKEESWKN---IH 180
DS E+ EEE GG G N Q+LFAQAETFIGNFYKQL+MQK+ESWKN +
Sbjct: 121 VDS--------EEAEEEASGGGAGGNGQDLFAQAETFIGNFYKQLEMQKQESWKNKTKME 164
Query: 181 GFYQKRS 183
GF Q S
Sbjct: 181 GFVQFNS 164
BLAST of Bhi11G000455 vs. ExPASy TrEMBL
Match:
A0A7N2M8H0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 168.3 bits (425), Expect = 2.9e-38
Identity = 108/205 (52.68%), Postives = 137/205 (66.83%), Query Frame = 0
Query: 1 MNKFKKSEILVLLGLTVLLVITPLLSSSLRPTYLYFIFNLLIIALGAQAGLLSSAFPNND 60
MNKFKKS++++L L VLL+ITPLLSSSLRPTYLYF+ N+LIIALGA+AGLLSS +N
Sbjct: 1 MNKFKKSQVVMLFLLAVLLIITPLLSSSLRPTYLYFVINILIIALGAEAGLLSSF--SNP 60
Query: 61 PPDQDKT----------------NKLSLTLSETV---ESSAKKHRALEKAHSDENPAGNV 120
D+ +T N + T ++ V S+ KK + +EK+ S E G+V
Sbjct: 61 SEDRKQTVLAAPKPLASSEVSPDNGVVRTTNDKVVAPASTEKKAKVVEKSAS-EKFVGSV 120
Query: 121 KMESLKKCPSASSIFYIGEGDSEAEDTTAVEDVEEEVGGGGN------NEQELFAQAETF 180
K++ + KCPS S+F+IG G+SEAED EEEV G +EQELF +AETF
Sbjct: 121 KIDKVTKCPSMPSLFFIGGGESEAEDVAEEAYAEEEVKGEEKDGEEEVSEQELFTKAETF 180
BLAST of Bhi11G000455 vs. ExPASy TrEMBL
Match:
A0A803QCC2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 167.2 bits (422), Expect = 6.5e-38
Identity = 105/188 (55.85%), Postives = 126/188 (67.02%), Query Frame = 0
Query: 2 NKFKKSEILVLLGLTVLLVITPLLSSSLRPTYLYFIFNLLIIALGAQAGLLSSAFPNNDP 61
NKFKKS++LVL L +LLVI PLLSSSLRPTYLYFI NLLII LGA+AGLLS F
Sbjct: 3 NKFKKSQVLVLSLLAILLVIAPLLSSSLRPTYLYFITNLLIIVLGAEAGLLSLIF---SK 62
Query: 62 PDQDKTNKLSLTLSETVESSAKKHRALEKAHSDENPAGNVKMESLKKCPSASSIFYIGEG 121
P ++ NK+ T + T +S KK + EK S + G+VK +KKCPS S+F+IG G
Sbjct: 63 PLEENNNKIKNT-THTSSASEKKVKIAEKTRS-QKVVGSVKAVRVKKCPSMPSLFFIGSG 122
Query: 122 DSEAE---------DTTAVEDVEEEVGGGGNNEQELFAQAETFIGNFYKQLKMQKEESWK 181
D + E D VE +EE GG QELF +AETFIGNFYKQLKMQ+E+SWK
Sbjct: 123 DQQKEEDFDEDIDGDDDYVEKKKEEEVGGEITGQELFTKAETFIGNFYKQLKMQREDSWK 182
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAA0055857.1 | 1.6e-70 | 83.60 | putative LIM and calponin domains-containing protein 1 [Cucumis melo var. makuwa... | [more] |
KGN56109.1 | 1.6e-67 | 81.68 | hypothetical protein Csa_011766 [Cucumis sativus] | [more] |
KAG6577458.1 | 5.7e-44 | 60.44 | hypothetical protein SDJN03_25032, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7015529.1 | 1.0e-40 | 59.32 | hypothetical protein SDJN02_23165, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022932284.1 | 2.5e-39 | 58.29 | uncharacterized protein LOC111438634 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3DK86 | 7.7e-71 | 83.60 | Putative LIM and calponin domains-containing protein 1 OS=Cucumis melo var. maku... | [more] |
A0A0A0L509 | 7.9e-68 | 81.68 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G074480 PE=4 SV=1 | [more] |
A0A6J1EWK2 | 1.2e-39 | 58.29 | uncharacterized protein LOC111438634 OS=Cucurbita moschata OX=3662 GN=LOC1114386... | [more] |
A0A7N2M8H0 | 2.9e-38 | 52.68 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
A0A803QCC2 | 6.5e-38 | 55.85 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |