Bhi10G001718 (gene) Wax gourd (B227) v1

Overview
NameBhi10G001718
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr10: 53174232 .. 53174564 (-)
RNA-Seq ExpressionBhi10G001718
SyntenyBhi10G001718
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCGATCTGGGGAAGAATTCGACGACGACGACGAGTTCCTCCGCCGCCGGTCCATGGCGGCATCGCTCCAAAACTCGACCCACCTCGGCGTTCTTACAACCCCTGAATCCACACTCCGCCGTGAGAAATTCGCCGATGGTCCTATAGACTTCTCTGCGAGAGACCTCTGTTTCGAGAATAGAGGATCGGAATCGGAATCCGAAACAGAGCACCGAAATAGAGACTCCCGTTCGAAGAAATCAGACAAATCCAACCCACAGCAAAGAACCCGATTCTCATCAACAAAGAAAATTGGGTTCCCGGCCAAGGGCGGGTTGCAAGGAATGTAG

mRNA sequence

ATGAATCGATCTGGGGAAGAATTCGACGACGACGACGAGTTCCTCCGCCGCCGGTCCATGGCGGCATCGCTCCAAAACTCGACCCACCTCGGCGTTCTTACAACCCCTGAATCCACACTCCGCCGTGAGAAATTCGCCGATGGTCCTATAGACTTCTCTGCGAGAGACCTCTGTTTCGAGAATAGAGGATCGGAATCGGAATCCGAAACAGAGCACCGAAATAGAGACTCCCGTTCGAAGAAATCAGACAAATCCAACCCACAGCAAAGAACCCGATTCTCATCAACAAAGAAAATTGGGTTCCCGGCCAAGGGCGGGTTGCAAGGAATGTAG

Coding sequence (CDS)

ATGAATCGATCTGGGGAAGAATTCGACGACGACGACGAGTTCCTCCGCCGCCGGTCCATGGCGGCATCGCTCCAAAACTCGACCCACCTCGGCGTTCTTACAACCCCTGAATCCACACTCCGCCGTGAGAAATTCGCCGATGGTCCTATAGACTTCTCTGCGAGAGACCTCTGTTTCGAGAATAGAGGATCGGAATCGGAATCCGAAACAGAGCACCGAAATAGAGACTCCCGTTCGAAGAAATCAGACAAATCCAACCCACAGCAAAGAACCCGATTCTCATCAACAAAGAAAATTGGGTTCCCGGCCAAGGGCGGGTTGCAAGGAATGTAG

Protein sequence

MNRSGEEFDDDDEFLRRRSMAASLQNSTHLGVLTTPESTLRREKFADGPIDFSARDLCFENRGSESESETEHRNRDSRSKKSDKSNPQQRTRFSSTKKIGFPAKGGLQGM
Homology
BLAST of Bhi10G001718 vs. NCBI nr
Match: PON39792.1 (hypothetical protein PanWU01x14_302210 [Parasponia andersonii])

HSP 1 Score: 124.8 bits (312), Expect = 4.6e-25
Identity = 76/113 (67.26%), Postives = 83/113 (73.45%), Query Frame = 0

Query: 2   NRSGEEFDDDDEFLRRRSMAASLQNSTHLGVLT---TPESTLRREKFADGPIDFSARDLC 61
           N SGE+ DDD+EFLRRRS AASLQNSTHLGVL     P S L  EK  D P DFS  DLC
Sbjct: 4   NLSGEDEDDDNEFLRRRSTAASLQNSTHLGVLAPDPNPVSKLLLEKLEDDPADFSLADLC 63

Query: 62  -FENRGSESESETEHRNRDSRSKKSDKSNPQQRTRFSSTKKIGFPAKGGLQGM 111
            F  RGS+SE     RNRDSRSKKS++S PQQ+ RFSSTK +GFPAK GLQGM
Sbjct: 64  FFRTRGSDSEL----RNRDSRSKKSERSRPQQKIRFSSTKNMGFPAKEGLQGM 112

BLAST of Bhi10G001718 vs. NCBI nr
Match: POO02806.1 (hypothetical protein TorRG33x02_017920 [Trema orientale])

HSP 1 Score: 122.5 bits (306), Expect = 2.3e-24
Identity = 74/113 (65.49%), Postives = 83/113 (73.45%), Query Frame = 0

Query: 2   NRSGEEFDDDDEFLRRRSMAASLQNSTHLGVLT---TPESTLRREKFADGPIDFSARDLC 61
           N SG++ DDD+EFLRRRS AASLQNSTHLGVL     P S L  EK  + P DFS  DLC
Sbjct: 4   NLSGDDEDDDEEFLRRRSTAASLQNSTHLGVLAPDPNPVSKLLLEKLEEDPADFSLTDLC 63

Query: 62  -FENRGSESESETEHRNRDSRSKKSDKSNPQQRTRFSSTKKIGFPAKGGLQGM 111
            F  RGS+SE     RNRDSRSKKS++S PQQ+ RFSSTK +GFPAK GLQGM
Sbjct: 64  FFRTRGSDSEL----RNRDSRSKKSERSRPQQKIRFSSTKNMGFPAKEGLQGM 112

BLAST of Bhi10G001718 vs. NCBI nr
Match: TQE14289.1 (hypothetical protein C1H46_000208 [Malus baccata])

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-07
Identity = 38/63 (60.32%), Postives = 42/63 (66.67%), Query Frame = 0

Query: 2  NRSGEEFDDDD--EFLRRRSMAASLQNSTHLGVLT---TPESTLRREKFADGPIDFSARD 60
          N  GEE DDD+  EFLRR+S   SLQNSTH+GVL     P S L REKF D P DFS  +
Sbjct: 18 NLFGEEHDDDEEFEFLRRQSTVVSLQNSTHVGVLVLEPKPTSKLCREKFEDDPTDFSLTN 77

BLAST of Bhi10G001718 vs. ExPASy TrEMBL
Match: A0A2P5ATC3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_302210 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.3e-25
Identity = 76/113 (67.26%), Postives = 83/113 (73.45%), Query Frame = 0

Query: 2   NRSGEEFDDDDEFLRRRSMAASLQNSTHLGVLT---TPESTLRREKFADGPIDFSARDLC 61
           N SGE+ DDD+EFLRRRS AASLQNSTHLGVL     P S L  EK  D P DFS  DLC
Sbjct: 4   NLSGEDEDDDNEFLRRRSTAASLQNSTHLGVLAPDPNPVSKLLLEKLEDDPADFSLADLC 63

Query: 62  -FENRGSESESETEHRNRDSRSKKSDKSNPQQRTRFSSTKKIGFPAKGGLQGM 111
            F  RGS+SE     RNRDSRSKKS++S PQQ+ RFSSTK +GFPAK GLQGM
Sbjct: 64  FFRTRGSDSEL----RNRDSRSKKSERSRPQQKIRFSSTKNMGFPAKEGLQGM 112

BLAST of Bhi10G001718 vs. ExPASy TrEMBL
Match: A0A2P5FYD7 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_017920 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.1e-24
Identity = 74/113 (65.49%), Postives = 83/113 (73.45%), Query Frame = 0

Query: 2   NRSGEEFDDDDEFLRRRSMAASLQNSTHLGVLT---TPESTLRREKFADGPIDFSARDLC 61
           N SG++ DDD+EFLRRRS AASLQNSTHLGVL     P S L  EK  + P DFS  DLC
Sbjct: 4   NLSGDDEDDDEEFLRRRSTAASLQNSTHLGVLAPDPNPVSKLLLEKLEEDPADFSLTDLC 63

Query: 62  -FENRGSESESETEHRNRDSRSKKSDKSNPQQRTRFSSTKKIGFPAKGGLQGM 111
            F  RGS+SE     RNRDSRSKKS++S PQQ+ RFSSTK +GFPAK GLQGM
Sbjct: 64  FFRTRGSDSEL----RNRDSRSKKSERSRPQQKIRFSSTKNMGFPAKEGLQGM 112

BLAST of Bhi10G001718 vs. ExPASy TrEMBL
Match: A0A2P2QPJ3 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.6e-10
Identity = 55/91 (60.44%), Postives = 60/91 (65.93%), Query Frame = 0

Query: 2  NRSGEEFDD--DDEFLRRRSMAASLQNSTHLGVLTT---PESTLRREKFADGPIDFSARD 61
          NRSG++  D  D EF  RRS AASLQNSTHLGVLT+   P S L REKF D P  FS  D
Sbjct: 4  NRSGDDGSDEEDAEFRLRRSTAASLQNSTHLGVLTSVTIPVSKLLREKFDDKPAHFSPTD 63

Query: 62 LCF-ENRGSESESETEHRNRDSRSKKSDKSN 87
          LCF  + G  S    E R RDSRSKKSD+SN
Sbjct: 64 LCFCRSIGYVS----EFRKRDSRSKKSDRSN 90

BLAST of Bhi10G001718 vs. ExPASy TrEMBL
Match: A0A540NTE5 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_000208 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 5.6e-08
Identity = 38/63 (60.32%), Postives = 42/63 (66.67%), Query Frame = 0

Query: 2  NRSGEEFDDDD--EFLRRRSMAASLQNSTHLGVLT---TPESTLRREKFADGPIDFSARD 60
          N  GEE DDD+  EFLRR+S   SLQNSTH+GVL     P S L REKF D P DFS  +
Sbjct: 18 NLFGEEHDDDEEFEFLRRQSTVVSLQNSTHVGVLVLEPKPTSKLCREKFEDDPTDFSLTN 77

BLAST of Bhi10G001718 vs. ExPASy TrEMBL
Match: A0A2N9H3G5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34297 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.7e-04
Identity = 37/70 (52.86%), Postives = 42/70 (60.00%), Query Frame = 0

Query: 11 DDEFLRRRSMAASLQNSTHLGVLTTPEST---LRREKFADGPIDFSARDLCFENRGSESE 70
          ++EFLRRRS AASLQNSTH GVL   + T   L REK  D   DFS  DLC         
Sbjct: 6  NEEFLRRRSTAASLQNSTHWGVLAPADPTMSKLLREKLEDDLADFSLTDLCLLRIWG--- 65

Query: 71 SETEHRNRDS 78
          S++E R RDS
Sbjct: 66 SDSELRKRDS 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
PON39792.14.6e-2567.26hypothetical protein PanWU01x14_302210 [Parasponia andersonii][more]
POO02806.12.3e-2465.49hypothetical protein TorRG33x02_017920 [Trema orientale][more]
TQE14289.11.2e-0760.32hypothetical protein C1H46_000208 [Malus baccata][more]
Match NameE-valueIdentityDescription
A0A2P5ATC32.3e-2567.26Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_302210 PE... [more]
A0A2P5FYD71.1e-2465.49Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_017920 PE=4 SV... [more]
A0A2P2QPJ31.6e-1060.44Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
A0A540NTE55.6e-0860.32Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_000208 PE=4 SV=1[more]
A0A2N9H3G53.7e-0452.86Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34297 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M001718Bhi10M001718mRNA