Bhi10G001435 (gene) Wax gourd (B227) v1

Overview


Name	Bhi10G001435
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	FRIGIDA-like protein 5 isoform X1
Location	chr10: 45512270 .. 45513227 (+)
RNA-Seq Expression	Bhi10G001435
Synteny	Bhi10G001435

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGATTTCTTCTCATTTGAAACTTGGGGACTGGACGCAGAGTAATCTCTGCAAACCCATGAACAGTTGCATTCGGAGGCTTCTTCCTTTCTTCTTTTTAGTCTTCAATGTAAAGATTTGGAATCTCACTTCCATTCTGCTCAAGAGATGATTCGGATCTAGTACCAAGAGTTTGAGCAATGGGAGAAAGTCATCGCATTGAAGGAATCGTGGTTTGATGATGCGGAGAAATCATTACAAGCGCGCTCAGAGAATGTCAAGAAAGAAGAAGTCTATTTGGAAAGACGAAGAGAGCAGCTCGAGAAACAATATGAGAAAGGGAGGACGTTCCTAAAGGAGATTGAATCTTTAAAAGCTGACATGGATTCACAGATATTACTGCTGGAAAAAGGCAGGGAAGAACTAAGGTTAAAGGAAATACAACACAAGGTATTGGCTAACGAACTTGAGTAAAAAAAAAAACATATCAATCTAGTCAGAGGTTTGATGAACAAATATAATGAAAAGGTTAATAAAGAGGTGGAATTGAATTTAGCCCAAGAGAGATTAGGAGTTTTGTCGAAAGATATTAAATTGAAAGAAGACGAGGTTGATAAAGTATGCACGAGATTCTTGGACGTTGAGATTGAATTCGCGAAAAAGGAGAAGGATTTTGATCAACTTAGCATGGAACCAAACGAGAAGGGTTTATATTTCCACCTGAACACGAAGTTGACTGGACCGAAATTGATACCATGTATAATTTTATTCGTTCTTAAAACAGTCTTCAGACCCTGCAAAACTTGTCTTGAATCTGATTTTTAGGTTCTTTTGACCAACAGTTGAAGAAAGAACAACTGGGCCTGGAAGAAAGTTTCTTGAGGTGGTCCACACTTCTTTTCAAGACAATTAGAGCAGATCTCACCCATTATTGGTCCAAAGGAAAGAGAATATGCAATGAAGCTTGCAGTTGA

mRNA sequence

ATGGAGAAGATTTCTTCTCATTTGAAACTTGGGGACTGGACGCAGATCATCGCATTGAAGGAATCGTGGTTTGATGATGCGGAGAAATCATTACAAGCGCGCTCAGAGAATGTCAAGAAAGAAGAAGTCTATTTGGAAAGACGAAGAGAGCAGCTCGAGAAACAATATGAGAAAGGGAGGACGTTCCTAAAGGAGATTGAATCTTTAAAAGCTGACATGGATTCACAGATATTACTGCTGGAAAAAGGCAGGGAAGAACTAAGGTTAAAGGAAATACAACACAAGGTTAATAAAGAGGTGGAATTGAATTTAGCCCAAGAGAGATTAGGAGTTTTGTCGAAAGATATTAAATTGAAAGAAGACGAGGTTGATAAAGTATGCACGAGATTCTTGGACGTTGAGATTGAATTCGCGAAAAAGGAGAAGGATTTTGATCAACTTAGCATGGAACCAAACGAGAAGGGTTCTTTTGACCAACAGTTGAAGAAAGAACAACTGGGCCTGGAAGAAAGTTTCTTGAGGTGGTCCACACTTCTTTTCAAGACAATTAGAGCAGATCTCACCCATTATTGGTCCAAAGGAAAGAGAATATGCAATGAAGCTTGCAGTTGA

Coding sequence (CDS)

ATGGAGAAGATTTCTTCTCATTTGAAACTTGGGGACTGGACGCAGATCATCGCATTGAAGGAATCGTGGTTTGATGATGCGGAGAAATCATTACAAGCGCGCTCAGAGAATGTCAAGAAAGAAGAAGTCTATTTGGAAAGACGAAGAGAGCAGCTCGAGAAACAATATGAGAAAGGGAGGACGTTCCTAAAGGAGATTGAATCTTTAAAAGCTGACATGGATTCACAGATATTACTGCTGGAAAAAGGCAGGGAAGAACTAAGGTTAAAGGAAATACAACACAAGGTTAATAAAGAGGTGGAATTGAATTTAGCCCAAGAGAGATTAGGAGTTTTGTCGAAAGATATTAAATTGAAAGAAGACGAGGTTGATAAAGTATGCACGAGATTCTTGGACGTTGAGATTGAATTCGCGAAAAAGGAGAAGGATTTTGATCAACTTAGCATGGAACCAAACGAGAAGGGTTCTTTTGACCAACAGTTGAAGAAAGAACAACTGGGCCTGGAAGAAAGTTTCTTGAGGTGGTCCACACTTCTTTTCAAGACAATTAGAGCAGATCTCACCCATTATTGGTCCAAAGGAAAGAGAATATGCAATGAAGCTTGCAGTTGA

Protein sequence

MEKISSHLKLGDWTQIIALKESWFDDAEKSLQARSENVKKEEVYLERRREQLEKQYEKGRTFLKEIESLKADMDSQILLLEKGREELRLKEIQHKVNKEVELNLAQERLGVLSKDIKLKEDEVDKVCTRFLDVEIEFAKKEKDFDQLSMEPNEKGSFDQQLKKEQLGLEESFLRWSTLLFKTIRADLTHYWSKGKRICNEACS

Homology

[Close]

BLAST of Bhi10G001435 vs. NCBI nr
Match: XP_016902129.1 (PREDICTED: FRIGIDA-like protein 5 isoform X2 [Cucumis melo])

HSP 1 Score: 87.4 bits (215), Expect = 1.5e-13
Identity = 57/123 (46.34%), Postives = 81/123 (65.85%), Query Frame = 0


Query: 5   SSHLKLGDWTQIIALKESWFDDAEKSLQARSENVKKEEVYLERRREQLEKQYEKGRTFLK 64
           S  L +G   + +  ++  FD   KS++ RS+N+K +E   ERR E+L K+ EK    LK
Sbjct: 334 SISLTVGKCLEGLKSQKEHFDVLRKSIEERSKNLKNKENDFERRTEELNKKDEKVSLCLK 393

Query: 65  EIESLKADMDSQILLLEKGREELRLKEIQHKV------NKEVELNLAQERLGVLSKDIKL 122
           EIESLKADMDSQILLLEKGREEL+LKEI+HK       +KE +++L +  +   ++ +KL
Sbjct: 394 EIESLKADMDSQILLLEKGREELKLKEIRHKALAEELESKEKDISLVRALMQKCNEKVKL 453

[Close]

BLAST of Bhi10G001435 vs. NCBI nr
Match: XP_016902126.1 (PREDICTED: FRIGIDA-like protein 5 isoform X1 [Cucumis melo] >XP_016902127.1 PREDICTED: FRIGIDA-like protein 5 isoform X1 [Cucumis melo] >XP_016902128.1 PREDICTED: FRIGIDA-like protein 5 isoform X1 [Cucumis melo])

HSP 1 Score: 87.4 bits (215), Expect = 1.5e-13
Identity = 57/123 (46.34%), Postives = 81/123 (65.85%), Query Frame = 0


Query: 5   SSHLKLGDWTQIIALKESWFDDAEKSLQARSENVKKEEVYLERRREQLEKQYEKGRTFLK 64
           S  L +G   + +  ++  FD   KS++ RS+N+K +E   ERR E+L K+ EK    LK
Sbjct: 334 SISLTVGKCLEGLKSQKEHFDVLRKSIEERSKNLKNKENDFERRTEELNKKDEKVSLCLK 393

Query: 65  EIESLKADMDSQILLLEKGREELRLKEIQHKV------NKEVELNLAQERLGVLSKDIKL 122
           EIESLKADMDSQILLLEKGREEL+LKEI+HK       +KE +++L +  +   ++ +KL
Sbjct: 394 EIESLKADMDSQILLLEKGREELKLKEIRHKALAEELESKEKDISLVRALMQKCNEKVKL 453

[Close]

BLAST of Bhi10G001435 vs. NCBI nr
Match: KAA0045783.1 (FRIGIDA-like protein 5 isoform X1 [Cucumis melo var. makuwa] >TYJ99498.1 FRIGIDA-like protein 5 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 87.4 bits (215), Expect = 1.5e-13
Identity = 57/123 (46.34%), Postives = 81/123 (65.85%), Query Frame = 0


Query: 5   SSHLKLGDWTQIIALKESWFDDAEKSLQARSENVKKEEVYLERRREQLEKQYEKGRTFLK 64
           S  L +G   + +  ++  FD   KS++ RS+N+K +E   ERR E+L K+ EK    LK
Sbjct: 333 SISLTVGKCLEGLKSQKEHFDVLRKSIEERSKNLKNKENDFERRTEELNKKDEKVSLCLK 392

Query: 65  EIESLKADMDSQILLLEKGREELRLKEIQHKV------NKEVELNLAQERLGVLSKDIKL 122
           EIESLKADMDSQILLLEKGREEL+LKEI+HK       +KE +++L +  +   ++ +KL
Sbjct: 393 EIESLKADMDSQILLLEKGREELKLKEIRHKALAEELESKEKDISLVRALMQKCNEKVKL 452

[Close]

BLAST of Bhi10G001435 vs. NCBI nr
Match: XP_022149541.1 (FRIGIDA-like protein 5 [Momordica charantia] >XP_022149542.1 FRIGIDA-like protein 5 [Momordica charantia])

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-11
Identity = 52/102 (50.98%), Postives = 68/102 (66.67%), Query Frame = 0


Query: 24  FDDAEKSLQARSENVKKEEVYLERRREQLEKQYEKGRTFLKEIESLKADMDSQILLLEKG 83
           F+   KS++ RS+ +K EE   ERR E+L ++ EK R +LKEIE +K DMDSQ+ LLEKG
Sbjct: 405 FNLLRKSIEERSKKLKNEENDFERRTEELNRKDEKVRMYLKEIELVKVDMDSQMKLLEKG 464

Query: 84  REELRLKEIQHKVNKEVELNLAQERLGVLSKDIKLKEDEVDK 126
           REELRLKEIQHKV          E+L +  KDI +  D ++K
Sbjct: 465 REELRLKEIQHKVQ--------AEKLELKEKDISVVRDFMEK 498

[Close]

BLAST of Bhi10G001435 vs. NCBI nr
Match: XP_004151190.1 (FRIGIDA-like protein 5 isoform X1 [Cucumis sativus] >KGN62054.2 hypothetical protein Csa_006125 [Cucumis sativus])

HSP 1 Score: 79.3 bits (194), Expect = 4.1e-11
Identity = 52/104 (50.00%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 24  FDDAEKSLQARSENVKKEEVYLERRREQLEKQYEKGRTFLKEIESLKADMDSQILLLEKG 83
           F+   K ++ RS+ ++  E   +RR E+L K+ EK   +LKEIESLKADMDSQILLLEK 
Sbjct: 408 FNALRKFIEERSKYLENVENNFKRRMEELNKKDEKVSLYLKEIESLKADMDSQILLLEKD 467

Query: 84  REELRLKEIQHKV------NKEVELNLAQERLGVLSKDIKLKED 122
           REELRLKEIQHK       +KE E+NL +  +   ++ +KL +D
Sbjct: 468 REELRLKEIQHKAPDEELESKEKEINLVRALIQKCNEKVKLIDD 511

[Close]

BLAST of Bhi10G001435 vs. ExPASy TrEMBL
Match: A0A1S4E1M7 (FRIGIDA-like protein 5 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497387 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 7.3e-14
Identity = 57/123 (46.34%), Postives = 81/123 (65.85%), Query Frame = 0


Query: 5   SSHLKLGDWTQIIALKESWFDDAEKSLQARSENVKKEEVYLERRREQLEKQYEKGRTFLK 64
           S  L +G   + +  ++  FD   KS++ RS+N+K +E   ERR E+L K+ EK    LK
Sbjct: 334 SISLTVGKCLEGLKSQKEHFDVLRKSIEERSKNLKNKENDFERRTEELNKKDEKVSLCLK 393

Query: 65  EIESLKADMDSQILLLEKGREELRLKEIQHKV------NKEVELNLAQERLGVLSKDIKL 122
           EIESLKADMDSQILLLEKGREEL+LKEI+HK       +KE +++L +  +   ++ +KL
Sbjct: 394 EIESLKADMDSQILLLEKGREELKLKEIRHKALAEELESKEKDISLVRALMQKCNEKVKL 453

[Close]

BLAST of Bhi10G001435 vs. ExPASy TrEMBL
Match: A0A5D3BMW7 (FRIGIDA-like protein 5 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00640 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 7.3e-14
Identity = 57/123 (46.34%), Postives = 81/123 (65.85%), Query Frame = 0


Query: 5   SSHLKLGDWTQIIALKESWFDDAEKSLQARSENVKKEEVYLERRREQLEKQYEKGRTFLK 64
           S  L +G   + +  ++  FD   KS++ RS+N+K +E   ERR E+L K+ EK    LK
Sbjct: 333 SISLTVGKCLEGLKSQKEHFDVLRKSIEERSKNLKNKENDFERRTEELNKKDEKVSLCLK 392

Query: 65  EIESLKADMDSQILLLEKGREELRLKEIQHKV------NKEVELNLAQERLGVLSKDIKL 122
           EIESLKADMDSQILLLEKGREEL+LKEI+HK       +KE +++L +  +   ++ +KL
Sbjct: 393 EIESLKADMDSQILLLEKGREELKLKEIRHKALAEELESKEKDISLVRALMQKCNEKVKL 452

[Close]

BLAST of Bhi10G001435 vs. ExPASy TrEMBL
Match: A0A1S4E1M5 (FRIGIDA-like protein 5 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497387 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 7.3e-14
Identity = 57/123 (46.34%), Postives = 81/123 (65.85%), Query Frame = 0


Query: 5   SSHLKLGDWTQIIALKESWFDDAEKSLQARSENVKKEEVYLERRREQLEKQYEKGRTFLK 64
           S  L +G   + +  ++  FD   KS++ RS+N+K +E   ERR E+L K+ EK    LK
Sbjct: 334 SISLTVGKCLEGLKSQKEHFDVLRKSIEERSKNLKNKENDFERRTEELNKKDEKVSLCLK 393

Query: 65  EIESLKADMDSQILLLEKGREELRLKEIQHKV------NKEVELNLAQERLGVLSKDIKL 122
           EIESLKADMDSQILLLEKGREEL+LKEI+HK       +KE +++L +  +   ++ +KL
Sbjct: 394 EIESLKADMDSQILLLEKGREELKLKEIRHKALAEELESKEKDISLVRALMQKCNEKVKL 453

[Close]

BLAST of Bhi10G001435 vs. ExPASy TrEMBL
Match: A0A6J1D8P6 (FRIGIDA-like protein 5 OS=Momordica charantia OX=3673 GN=LOC111017951 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 6.9e-12
Identity = 52/102 (50.98%), Postives = 68/102 (66.67%), Query Frame = 0


Query: 24  FDDAEKSLQARSENVKKEEVYLERRREQLEKQYEKGRTFLKEIESLKADMDSQILLLEKG 83
           F+   KS++ RS+ +K EE   ERR E+L ++ EK R +LKEIE +K DMDSQ+ LLEKG
Sbjct: 405 FNLLRKSIEERSKKLKNEENDFERRTEELNRKDEKVRMYLKEIELVKVDMDSQMKLLEKG 464

Query: 84  REELRLKEIQHKVNKEVELNLAQERLGVLSKDIKLKEDEVDK 126
           REELRLKEIQHKV          E+L +  KDI +  D ++K
Sbjct: 465 REELRLKEIQHKVQ--------AEKLELKEKDISVVRDFMEK 498

[Close]

BLAST of Bhi10G001435 vs. ExPASy TrEMBL
Match: A0A0A0LMH5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277090 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.0e-11
Identity = 52/104 (50.00%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 24  FDDAEKSLQARSENVKKEEVYLERRREQLEKQYEKGRTFLKEIESLKADMDSQILLLEKG 83
           F+   K ++ RS+ ++  E   +RR E+L K+ EK   +LKEIESLKADMDSQILLLEK 
Sbjct: 405 FNALRKFIEERSKYLENVENNFKRRMEELNKKDEKVSLYLKEIESLKADMDSQILLLEKD 464

Query: 84  REELRLKEIQHKV------NKEVELNLAQERLGVLSKDIKLKED 122
           REELRLKEIQHK       +KE E+NL +  +   ++ +KL +D
Sbjct: 465 REELRLKEIQHKAPDEELESKEKEINLVRALIQKCNEKVKLIDD 508

The following BLAST results are available for this feature:

BLAST of Bhi10G001435 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi10G001435 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi10G001435 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902129.1	1.5e-13	46.34	PREDICTED: FRIGIDA-like protein 5 isoform X2 [Cucumis melo]	[more]
XP_016902126.1	1.5e-13	46.34	PREDICTED: FRIGIDA-like protein 5 isoform X1 [Cucumis melo] >XP_016902127.1 PRED...	[more]
KAA0045783.1	1.5e-13	46.34	FRIGIDA-like protein 5 isoform X1 [Cucumis melo var. makuwa] >TYJ99498.1 FRIGIDA...	[more]
XP_022149541.1	1.4e-11	50.98	FRIGIDA-like protein 5 [Momordica charantia] >XP_022149542.1 FRIGIDA-like protei...	[more]
XP_004151190.1	4.1e-11	50.00	FRIGIDA-like protein 5 isoform X1 [Cucumis sativus] >KGN62054.2 hypothetical pro...	[more]

BLAST of Bhi10G001435 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E1M7	7.3e-14	46.34	FRIGIDA-like protein 5 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497387 PE=3 S...	[more]
A0A5D3BMW7	7.3e-14	46.34	FRIGIDA-like protein 5 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S4E1M5	7.3e-14	46.34	FRIGIDA-like protein 5 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497387 PE=3 S...	[more]
A0A6J1D8P6	6.9e-12	50.98	FRIGIDA-like protein 5 OS=Momordica charantia OX=3673 GN=LOC111017951 PE=3 SV=1	[more]
A0A0A0LMH5	2.0e-11	50.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277090 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 35..55
None	No IPR available	COILS	Coil	Coil	coord: 102..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M001435	Bhi10M001435	mRNA