Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTACAAAGACGTTTTTATGGCACGTCTTTACAACCTTACATCTTGTGGATACGAAATCTGGAACGAAAGTTTGTGGAAGGATTACCTCCTTATATCGCTGAAAAATTTTATCAGAAGATATCTGAAATCTTCGAAGGAAATCAAATCAACTGGAATTCTCTCACTTATGGAGATATTACCAGTAACATTCAAGCCTTATGCTTAAGTCTTTGTAAAGACAACAAGCATAATCAAAGAATCATCAAAGATGCAGATTATCGAAAGGAACTAGGGACTTTCTGCAAACAATACGGTGTTGAACAAGATCTACCGCCTTCAAAGAAAAAGAAGAAATTTTCAAAGAAACCGTACAGAAAAGGTCGGAGAACAAAGGACGAGGAAAAACCTCGAAAAAGGAAGTACTACAATAAAAACAAGAAGTATTCCAAGAAAAAAGGAACTACTTGTTTTCCCTGCAACAAACAGGGACACTATGCTAACAAATGCCCATTGATAAAGAAAATCAACAACCTACAGATTGACCATGACCTAAAACAATCTTTTCTCTTTGCCATTCGGTCTGAAGATGAAACCTCTATTTCAGAAGAATCATCTTCCGAGTGA
mRNA sequence
ATGGTACAAAGACGTTTTTATGGCACGTCTTTACAACCTTACATCTTGTGGATACGAAATCTGGAACGAAAGTTTGTGGAAGGATTACCTCCTTATATCGCTGAAAAATTTTATCAGAAGATATCTGAAATCTTCGAAGGAAATCAAATCAACTGGAATTCTCTCACTTATGGAGATATTACCAGTAACATTCAAGCCTTATGCTTAAGTCTTTGTAAAGACAACAAGCATAATCAAAGAATCATCAAAGATGCAGATTATCGAAAGGAACTAGGGACTTTCTGCAAACAATACGGTGTTGAACAAGATCTACCGCCTTCAAAGAAAAAGAAGAAATTTTCAAAGAAACCGTACAGAAAAGGTCGGAGAACAAAGGACGAGGAAAAACCTCGAAAAAGGAAGTACTACAATAAAAACAAGAAGTATTCCAAGAAAAAAGGAACTACTTGTTTTCCCTGCAACAAACAGGGACACTATGCTAACAAATGCCCATTGATAAAGAAAATCAACAACCTACAGATTGACCATGACCTAAAACAATCTTTTCTCTTTGCCATTCGGTCTGAAGATGAAACCTCTATTTCAGAAGAATCATCTTCCGAGTGA
Coding sequence (CDS)
ATGGTACAAAGACGTTTTTATGGCACGTCTTTACAACCTTACATCTTGTGGATACGAAATCTGGAACGAAAGTTTGTGGAAGGATTACCTCCTTATATCGCTGAAAAATTTTATCAGAAGATATCTGAAATCTTCGAAGGAAATCAAATCAACTGGAATTCTCTCACTTATGGAGATATTACCAGTAACATTCAAGCCTTATGCTTAAGTCTTTGTAAAGACAACAAGCATAATCAAAGAATCATCAAAGATGCAGATTATCGAAAGGAACTAGGGACTTTCTGCAAACAATACGGTGTTGAACAAGATCTACCGCCTTCAAAGAAAAAGAAGAAATTTTCAAAGAAACCGTACAGAAAAGGTCGGAGAACAAAGGACGAGGAAAAACCTCGAAAAAGGAAGTACTACAATAAAAACAAGAAGTATTCCAAGAAAAAAGGAACTACTTGTTTTCCCTGCAACAAACAGGGACACTATGCTAACAAATGCCCATTGATAAAGAAAATCAACAACCTACAGATTGACCATGACCTAAAACAATCTTTTCTCTTTGCCATTCGGTCTGAAGATGAAACCTCTATTTCAGAAGAATCATCTTCCGAGTGA
Protein sequence
MVQRRFYGTSLQPYILWIRNLERKFVEGLPPYIAEKFYQKISEIFEGNQINWNSLTYGDITSNIQALCLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQDLPPSKKKKKFSKKPYRKGRRTKDEEKPRKRKYYNKNKKYSKKKGTTCFPCNKQGHYANKCPLIKKINNLQIDHDLKQSFLFAIRSEDETSISEESSSE
Homology
BLAST of Bhi10G001359 vs. NCBI nr
Match:
KAA0057417.1 (Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 199.9 bits (507), Expect = 2.1e-47
Identity = 105/185 (56.76%), Postives = 137/185 (74.05%), Query Frame = 0
Query: 22 ERKFVEGLPPYIAEKFYQKISEIFEGNQINWNSLTYGDITSNIQALCLSLCKDNKHNQRI 81
++KFVEGLP YI++KFYQ ++E QI+W +LTYGDI+S +Q +C++LC +NKH ++
Sbjct: 686 KQKFVEGLPHYISQKFYQTMTENSVNQQIDWANLTYGDISSTVQMICVNLCTENKHTTKV 745
Query: 82 IKDADYRKELGTFCKQYGVEQ-DLPPSKKKKKFSKKPYRKGRRTKDEEKPRKRK-YYNK- 141
IKD+DYRKELGTFCKQYG+ Q KKKKK+S K + + + KD+E PR+RK +YNK
Sbjct: 746 IKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKYSSKKFFRRSKPKDQESPRRRKHHYNKG 805
Query: 142 --NKKYSKKKGTTCFPCNKQGHYANKCPLIKKINNLQIDHDLKQSFLFAIRSEDETSISE 201
K+YS K T CF CN++GHYAN+CPL KIN L ID KQS L+AIRS+D+TS
Sbjct: 806 KGKKRYSSKTNTICFKCNQKGHYANRCPLQDKINALTIDEKTKQSILYAIRSDDDTSSQT 865
BLAST of Bhi10G001359 vs. NCBI nr
Match:
TYJ97599.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 195.3 bits (495), Expect = 5.1e-46
Identity = 102/186 (54.84%), Postives = 137/186 (73.66%), Query Frame = 0
Query: 22 ERKFVEGLPPYIAEKFYQKISEIFEGNQINWNSLTYGDITSNIQALCLSLCKDNKHNQRI 81
++KFVEGLP YI++KFYQ ++ QI+W +LTYGDI+S +Q +C++LC +NKH ++
Sbjct: 795 KQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTVQMICVNLCTENKHTTKV 854
Query: 82 IKDADYRKELGTFCKQYGVEQDLPPSKKKKK--FSKKPYRKGRRTKDEEKPRKRK-YYNK 141
IKD+DYRKELGTFCKQYG+ Q KKKKK +S K + + +TKD+E P++RK +YNK
Sbjct: 855 IKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKSKTKDQESPQRRKRHYNK 914
Query: 142 NKK---YSKKKGTTCFPCNKQGHYANKCPLIKKINNLQIDHDLKQSFLFAIRSEDETSIS 201
K YS K T CF CN++GHYAN+CPL KIN + ID + KQS L+AIRS+D+T+
Sbjct: 915 GKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKINAMTIDEETKQSLLYAIRSDDDTTSQ 974
BLAST of Bhi10G001359 vs. NCBI nr
Match:
KAA0056776.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 193.7 bits (491), Expect = 1.5e-45
Identity = 101/186 (54.30%), Postives = 136/186 (73.12%), Query Frame = 0
Query: 22 ERKFVEGLPPYIAEKFYQKISEIFEGNQINWNSLTYGDITSNIQALCLSLCKDNKHNQRI 81
++KFVEGLP YI++KFYQ ++ QI+W +LTYGDI+S +Q +C++LC +NKH ++
Sbjct: 795 KQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTVQMICVNLCTENKHTTKV 854
Query: 82 IKDADYRKELGTFCKQYGVEQDLPPSKKKKK--FSKKPYRKGRRTKDEEKP-RKRKYYNK 141
IKD+DYRKELGTFCKQYG+ Q KKKKK +S K + + + KD+E P R+R++YNK
Sbjct: 855 IKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKSKAKDQESPRRRRRHYNK 914
Query: 142 NKK---YSKKKGTTCFPCNKQGHYANKCPLIKKINNLQIDHDLKQSFLFAIRSEDETSIS 201
K YS K T CF CN++GHYAN+CPL KIN + ID + KQS L+AIRS+D+T+
Sbjct: 915 GKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKINAMTIDEETKQSLLYAIRSDDDTTSQ 974
BLAST of Bhi10G001359 vs. NCBI nr
Match:
KAA0068171.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 193.4 bits (490), Expect = 1.9e-45
Identity = 102/184 (55.43%), Postives = 133/184 (72.28%), Query Frame = 0
Query: 22 ERKFVEGLPPYIAEKFYQKISEIFEGNQINWNSLTYGDITSNIQALCLSLCKDNKHNQRI 81
++KFVEGLP YI++KFYQ ++ QI+W +LTYGDI+S IQ +C++LC +NKH ++
Sbjct: 27 KQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTIQMICVNLCTENKHTTKV 86
Query: 82 IKDADYRKELGTFCKQYGVEQDLPPSKKKKKFSKKPYRKGRRTKDEEK-PRKRKYYNK-- 141
IKD+DYRKELGTFCKQYG+ Q KKKKK + R+ KD+E PR+R++Y K
Sbjct: 87 IKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSRKFFRKNKDQESPPRRRRHYYKGK 146
Query: 142 -NKKYSKKKGTTCFPCNKQGHYANKCPLIKKINNLQIDHDLKQSFLFAIRSEDETSISEE 201
KKYS K T CF CN++GHYAN+CPL KIN L +D + KQS L+AIR++DETS E
Sbjct: 147 GKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTVDEETKQSLLYAIRTDDETSSQTE 206
BLAST of Bhi10G001359 vs. NCBI nr
Match:
KAA0040830.1 (hypothetical protein E6C27_scaffold333G00500 [Cucumis melo var. makuwa] >TYK17806.1 hypothetical protein E5676_scaffold306G00540 [Cucumis melo var. makuwa])
HSP 1 Score: 193.4 bits (490), Expect = 1.9e-45
Identity = 99/177 (55.93%), Postives = 132/177 (74.58%), Query Frame = 0
Query: 22 ERKFVEGLPPYIAEKFYQKISEIFEGNQINWNSLTYGDITSNIQALCLSLCKDNKHNQRI 81
++KFVEGLP YI++KFYQ ++ QI+W +LTYGDI+S +Q +C++LC +NKH ++
Sbjct: 132 KQKFVEGLPHYISQKFYQTMTTNSVNQQIDWANLTYGDISSTVQMICVNLCIENKHTTKV 191
Query: 82 IKDADYRKELGTFCKQYGVEQ-DLPPSKKKKKFSKKPYRKGRRTKDEEKPRKRK-YYNK- 141
IKD+DYRKELGTFCKQYG+ Q KKKKK+S K + + + KD+E PR+RK +YNK
Sbjct: 192 IKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKYSSKKFFRRSKPKDQESPRRRKHHYNKG 251
Query: 142 --NKKYSKKKGTTCFPCNKQGHYANKCPLIKKINNLQIDHDLKQSFLFAIRSEDETS 194
K+YS K T CF CN++GHYAN+CPL KIN L ID + KQS L+AIRS+D+TS
Sbjct: 252 KGKKRYSSKTNTICFKCNQEGHYANRCPLKDKINALTIDEETKQSLLYAIRSDDDTS 308
BLAST of Bhi10G001359 vs. ExPASy TrEMBL
Match:
A0A5A7URX9 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00980 PE=4 SV=1)
HSP 1 Score: 199.9 bits (507), Expect = 1.0e-47
Identity = 105/185 (56.76%), Postives = 137/185 (74.05%), Query Frame = 0
Query: 22 ERKFVEGLPPYIAEKFYQKISEIFEGNQINWNSLTYGDITSNIQALCLSLCKDNKHNQRI 81
++KFVEGLP YI++KFYQ ++E QI+W +LTYGDI+S +Q +C++LC +NKH ++
Sbjct: 686 KQKFVEGLPHYISQKFYQTMTENSVNQQIDWANLTYGDISSTVQMICVNLCTENKHTTKV 745
Query: 82 IKDADYRKELGTFCKQYGVEQ-DLPPSKKKKKFSKKPYRKGRRTKDEEKPRKRK-YYNK- 141
IKD+DYRKELGTFCKQYG+ Q KKKKK+S K + + + KD+E PR+RK +YNK
Sbjct: 746 IKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKYSSKKFFRRSKPKDQESPRRRKHHYNKG 805
Query: 142 --NKKYSKKKGTTCFPCNKQGHYANKCPLIKKINNLQIDHDLKQSFLFAIRSEDETSISE 201
K+YS K T CF CN++GHYAN+CPL KIN L ID KQS L+AIRS+D+TS
Sbjct: 806 KGKKRYSSKTNTICFKCNQKGHYANRCPLQDKINALTIDEKTKQSILYAIRSDDDTSSQT 865
BLAST of Bhi10G001359 vs. ExPASy TrEMBL
Match:
A0A5D3BEY3 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00300 PE=4 SV=1)
HSP 1 Score: 195.3 bits (495), Expect = 2.5e-46
Identity = 102/186 (54.84%), Postives = 137/186 (73.66%), Query Frame = 0
Query: 22 ERKFVEGLPPYIAEKFYQKISEIFEGNQINWNSLTYGDITSNIQALCLSLCKDNKHNQRI 81
++KFVEGLP YI++KFYQ ++ QI+W +LTYGDI+S +Q +C++LC +NKH ++
Sbjct: 795 KQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTVQMICVNLCTENKHTTKV 854
Query: 82 IKDADYRKELGTFCKQYGVEQDLPPSKKKKK--FSKKPYRKGRRTKDEEKPRKRK-YYNK 141
IKD+DYRKELGTFCKQYG+ Q KKKKK +S K + + +TKD+E P++RK +YNK
Sbjct: 855 IKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKSKTKDQESPQRRKRHYNK 914
Query: 142 NKK---YSKKKGTTCFPCNKQGHYANKCPLIKKINNLQIDHDLKQSFLFAIRSEDETSIS 201
K YS K T CF CN++GHYAN+CPL KIN + ID + KQS L+AIRS+D+T+
Sbjct: 915 GKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKINAMTIDEETKQSLLYAIRSDDDTTSQ 974
BLAST of Bhi10G001359 vs. ExPASy TrEMBL
Match:
A0A5A7UR29 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00660 PE=4 SV=1)
HSP 1 Score: 193.7 bits (491), Expect = 7.2e-46
Identity = 101/186 (54.30%), Postives = 136/186 (73.12%), Query Frame = 0
Query: 22 ERKFVEGLPPYIAEKFYQKISEIFEGNQINWNSLTYGDITSNIQALCLSLCKDNKHNQRI 81
++KFVEGLP YI++KFYQ ++ QI+W +LTYGDI+S +Q +C++LC +NKH ++
Sbjct: 795 KQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTVQMICVNLCTENKHTTKV 854
Query: 82 IKDADYRKELGTFCKQYGVEQDLPPSKKKKK--FSKKPYRKGRRTKDEEKP-RKRKYYNK 141
IKD+DYRKELGTFCKQYG+ Q KKKKK +S K + + + KD+E P R+R++YNK
Sbjct: 855 IKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKSKAKDQESPRRRRRHYNK 914
Query: 142 NKK---YSKKKGTTCFPCNKQGHYANKCPLIKKINNLQIDHDLKQSFLFAIRSEDETSIS 201
K YS K T CF CN++GHYAN+CPL KIN + ID + KQS L+AIRS+D+T+
Sbjct: 915 GKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKINAMTIDEETKQSLLYAIRSDDDTTSQ 974
BLAST of Bhi10G001359 vs. ExPASy TrEMBL
Match:
A0A5D3D3M0 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00540 PE=4 SV=1)
HSP 1 Score: 193.4 bits (490), Expect = 9.4e-46
Identity = 99/177 (55.93%), Postives = 132/177 (74.58%), Query Frame = 0
Query: 22 ERKFVEGLPPYIAEKFYQKISEIFEGNQINWNSLTYGDITSNIQALCLSLCKDNKHNQRI 81
++KFVEGLP YI++KFYQ ++ QI+W +LTYGDI+S +Q +C++LC +NKH ++
Sbjct: 132 KQKFVEGLPHYISQKFYQTMTTNSVNQQIDWANLTYGDISSTVQMICVNLCIENKHTTKV 191
Query: 82 IKDADYRKELGTFCKQYGVEQ-DLPPSKKKKKFSKKPYRKGRRTKDEEKPRKRK-YYNK- 141
IKD+DYRKELGTFCKQYG+ Q KKKKK+S K + + + KD+E PR+RK +YNK
Sbjct: 192 IKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKYSSKKFFRRSKPKDQESPRRRKHHYNKG 251
Query: 142 --NKKYSKKKGTTCFPCNKQGHYANKCPLIKKINNLQIDHDLKQSFLFAIRSEDETS 194
K+YS K T CF CN++GHYAN+CPL KIN L ID + KQS L+AIRS+D+TS
Sbjct: 252 KGKKRYSSKTNTICFKCNQEGHYANRCPLKDKINALTIDEETKQSLLYAIRSDDDTS 308
BLAST of Bhi10G001359 vs. ExPASy TrEMBL
Match:
A0A5D3DBS1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00570 PE=4 SV=1)
HSP 1 Score: 193.4 bits (490), Expect = 9.4e-46
Identity = 102/184 (55.43%), Postives = 133/184 (72.28%), Query Frame = 0
Query: 22 ERKFVEGLPPYIAEKFYQKISEIFEGNQINWNSLTYGDITSNIQALCLSLCKDNKHNQRI 81
++KFVEGLP YI++KFYQ ++ QI+W +LTYGDI+S IQ +C++LC +NKH ++
Sbjct: 27 KQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTIQMICVNLCTENKHTTKV 86
Query: 82 IKDADYRKELGTFCKQYGVEQDLPPSKKKKKFSKKPYRKGRRTKDEEK-PRKRKYYNK-- 141
IKD+DYRKELGTFCKQYG+ Q KKKKK + R+ KD+E PR+R++Y K
Sbjct: 87 IKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSRKFFRKNKDQESPPRRRRHYYKGK 146
Query: 142 -NKKYSKKKGTTCFPCNKQGHYANKCPLIKKINNLQIDHDLKQSFLFAIRSEDETSISEE 201
KKYS K T CF CN++GHYAN+CPL KIN L +D + KQS L+AIR++DETS E
Sbjct: 147 GKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTVDEETKQSLLYAIRTDDETSSQTE 206
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAA0057417.1 | 2.1e-47 | 56.76 | Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprote... | [more] |
TYJ97599.1 | 5.1e-46 | 54.84 | Enzymatic polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0056776.1 | 1.5e-45 | 54.30 | Enzymatic polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0068171.1 | 1.9e-45 | 55.43 | Enzymatic polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0040830.1 | 1.9e-45 | 55.93 | hypothetical protein E6C27_scaffold333G00500 [Cucumis melo var. makuwa] >TYK1780... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7URX9 | 1.0e-47 | 56.76 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21... | [more] |
A0A5D3BEY3 | 2.5e-46 | 54.84 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold69... | [more] |
A0A5A7UR29 | 7.2e-46 | 54.30 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48... | [more] |
A0A5D3D3M0 | 9.4e-46 | 55.93 | CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A5D3DBS1 | 9.4e-46 | 55.43 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39... | [more] |