Bhi10G001352 (gene) Wax gourd (B227) v1

Overview


Name	Bhi10G001352
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr10: 42900542 .. 42900997 (-)
RNA-Seq Expression	Bhi10G001352
Synteny	Bhi10G001352

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTGGTGAATCCCTCTGCTGGACGTGCATTCATATGGATCGTCACTTGCTTTCTCTTCTTCTCCATTATCAGCGGCGGCGGCTGTCTTTTGATGTACATGATCCTCCCTGAGACCGAAACCACTGCCTGGCTACCCGTCGCCGGTTTGTCCTTGGTCTGTCTCCCTTGGTTCTTTTGGCTCTTAACTTTCTTCTACAGAGTCATCTCTCGTGCATGTGGTTTTAGAGTCTCCATTGGTATTGGCGTAGATGTCGGGGCCGATAACGCAAATGCCAATAATAACAATAATAACAATAATGCATCTGCTGAATCCCCTCGACACGATGGGGGAGATCGAGTTGATGAGGAGGACGACGACAATGGTGATCAAAGGCGAAGCAATTCGTCATCCAACAACTCGATAGCGTCTCGTGAGAGTGAAATGCCATTAGCCATAACAATGGGGTCGTAA

mRNA sequence

ATGTCTTTGGTGAATCCCTCTGCTGGACGTGCATTCATATGGATCGTCACTTGCTTTCTCTTCTTCTCCATTATCAGCGGCGGCGGCTGTCTTTTGATGTACATGATCCTCCCTGAGACCGAAACCACTGCCTGGCTACCCGTCGCCGGTTTGTCCTTGGTCTGTCTCCCTTGGTTCTTTTGGCTCTTAACTTTCTTCTACAGAGTCATCTCTCGTGCATGTGGTTTTAGAGTCTCCATTGGTATTGGCGTAGATGTCGGGGCCGATAACGCAAATGCCAATAATAACAATAATAACAATAATGCATCTGCTGAATCCCCTCGACACGATGGGGGAGATCGAGTTGATGAGGAGGACGACGACAATGGTGATCAAAGGCGAAGCAATTCGTCATCCAACAACTCGATAGCGTCTCGTGAGAGTGAAATGCCATTAGCCATAACAATGGGGTCGTAA

Coding sequence (CDS)

ATGTCTTTGGTGAATCCCTCTGCTGGACGTGCATTCATATGGATCGTCACTTGCTTTCTCTTCTTCTCCATTATCAGCGGCGGCGGCTGTCTTTTGATGTACATGATCCTCCCTGAGACCGAAACCACTGCCTGGCTACCCGTCGCCGGTTTGTCCTTGGTCTGTCTCCCTTGGTTCTTTTGGCTCTTAACTTTCTTCTACAGAGTCATCTCTCGTGCATGTGGTTTTAGAGTCTCCATTGGTATTGGCGTAGATGTCGGGGCCGATAACGCAAATGCCAATAATAACAATAATAACAATAATGCATCTGCTGAATCCCCTCGACACGATGGGGGAGATCGAGTTGATGAGGAGGACGACGACAATGGTGATCAAAGGCGAAGCAATTCGTCATCCAACAACTCGATAGCGTCTCGTGAGAGTGAAATGCCATTAGCCATAACAATGGGGTCGTAA

Protein sequence

MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFFWLLTFFYRVISRACGFRVSIGIGVDVGADNANANNNNNNNNASAESPRHDGGDRVDEEDDDNGDQRRSNSSSNNSIASRESEMPLAITMGS

Homology

[Close]

BLAST of Bhi10G001352 vs. TAIR 10
Match: AT4G30770.1 (Putative membrane lipoprotein )

HSP 1 Score: 106.3 bits (264), Expect = 2.2e-23
Identity = 72/163 (44.17%), Postives = 96/163 (58.90%), Query Frame = 0


Query: 1   MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFF 60
           M + +P AG+AFI ++T FLF SI  GGGCL+ Y ILP      WL   G+  VCLPWFF
Sbjct: 1   MPVPDPRAGQAFICLITLFLFLSIAVGGGCLIAYTILP--YPPVWLSYLGIVFVCLPWFF 60

Query: 61  WLLTFFYRVISRACGFRVSIGIGVDVGADNANANNNNNNNN-----ASAESPRHDGGDRV 120
           W+LTF YR++SR  GFR+ +G     G +N NAN      +      S ESP  D  + +
Sbjct: 61  WILTFAYRIVSRTFGFRMVVG----SGGNNNNANGETMTRDLDPPEQSLESPDDDDPEPI 120

Query: 121 DEED-------DDNGDQRRSNSSSNNSIASRESEMPLAITMGS 152
                      + N  ++R ++SSN++IAS ESEMPLAI+M S
Sbjct: 121 AHPQGQVLVSIEGNQSKKRMSTSSNSTIASHESEMPLAISMAS 157

[Close]

BLAST of Bhi10G001352 vs. NCBI nr
Match: XP_038900833.1 (uncharacterized protein LOC120087896 [Benincasa hispida])

HSP 1 Score: 290.4 bits (742), Expect = 8.8e-75
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFF 60
           MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFF
Sbjct: 1   MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFF 60

Query: 61  WLLTFFYRVISRACGFRVSIGIGVDVGADNANANNNNNNNNASAESPRHDGGDRVDEEDD 120
           WLLTFFYRVISRACGFRVSIGIGVDVGADNANANNNNNNNNASAESPRHDGGDRVDEEDD
Sbjct: 61  WLLTFFYRVISRACGFRVSIGIGVDVGADNANANNNNNNNNASAESPRHDGGDRVDEEDD 120

Query: 121 DNGDQRRSNSSSNNSIASRESEMPLAITMGS 152
           DNGDQRRSNSSSNNSIASRESEMPLAITMGS
Sbjct: 121 DNGDQRRSNSSSNNSIASRESEMPLAITMGS 151

[Close]

BLAST of Bhi10G001352 vs. NCBI nr
Match: XP_011649431.1 (putative uncharacterized protein DDB_G0284715 [Cucumis sativus])

HSP 1 Score: 241.5 bits (615), Expect = 4.7e-60
Identity = 127/151 (84.11%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFF 60
           MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPETETTAWLP+ GLSLVCLPWFF
Sbjct: 1   MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPITGLSLVCLPWFF 60

Query: 61  WLLTFFYRVISRACGFRVSIGIGVDVGADNANANNNNNNNNASAESPRHDGGDRVDEEDD 120
           WLLTFFYRV+SRACGFRVS+GIG DV ++NANANNNNNNN +SAES + D G+R D ED+
Sbjct: 61  WLLTFFYRVLSRACGFRVSLGIGADVSSNNANANNNNNNNASSAESAQQDVGER-DNEDN 120

Query: 121 DNGDQRRSNSSSNNSIASRESEMPLAITMGS 152
           +N DQR SNSSSNNSI SRESEMPLAITM S
Sbjct: 121 NNADQRHSNSSSNNSIVSRESEMPLAITMAS 150

[Close]

BLAST of Bhi10G001352 vs. NCBI nr
Match: KAA0040748.1 (hypothetical protein E6C27_scaffold703G00110 [Cucumis melo var. makuwa] >TYK02064.1 hypothetical protein E5676_scaffold680G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 234.2 bits (596), Expect = 7.5e-58
Identity = 126/152 (82.89%), Postives = 136/152 (89.47%), Query Frame = 0


Query: 1   MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFF 60
           MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPE+E+T WLP+ GLSLVCLPWFF
Sbjct: 1   MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPESESTEWLPITGLSLVCLPWFF 60

Query: 61  WLLTFFYRVISRACGFRVSIGIGVDVGADNANANNNNNNNNA-SAESPRHDGGDRVDEED 120
           WLLTFFYRVISRACG+RVS+G G DVG +N N NNNNNNNNA SAESPR D G+R   ED
Sbjct: 61  WLLTFFYRVISRACGYRVSLGTGADVGTNNVNDNNNNNNNNASSAESPRQDVGER-GNED 120

Query: 121 DDNGDQRRSNSSSNNSIASRESEMPLAITMGS 152
           ++N DQR+SNSSSNNSI SRESEMPLAITM S
Sbjct: 121 NNNVDQRKSNSSSNNSIVSRESEMPLAITMAS 151

[Close]

BLAST of Bhi10G001352 vs. NCBI nr
Match: XP_008460874.1 (PREDICTED: putative uncharacterized protein DDB_G0283431 [Cucumis melo])

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-57
Identity = 126/152 (82.89%), Postives = 136/152 (89.47%), Query Frame = 0


Query: 1   MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFF 60
           MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPE+E+T WLP+ GLSLVCLPWFF
Sbjct: 1   MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPESESTEWLPITGLSLVCLPWFF 60

Query: 61  WLLTFFYRVISRACGFRVSIGIGVDVGADNANANNNNNNNNA-SAESPRHDGGDRVDEED 120
           WLLTFFYRVISRACG+RVS+G G DVG +N N NNNNNNNNA SAESPR D G+R   ED
Sbjct: 61  WLLTFFYRVISRACGYRVSLGTGEDVGTNNVNDNNNNNNNNASSAESPRQDVGER-GNED 120

Query: 121 DDNGDQRRSNSSSNNSIASRESEMPLAITMGS 152
           ++N DQR+SNSSSNNSI SRESEMPLAITM S
Sbjct: 121 NNNVDQRKSNSSSNNSIVSRESEMPLAITMAS 151

[Close]

BLAST of Bhi10G001352 vs. NCBI nr
Match: KAE8651991.1 (hypothetical protein Csa_016945 [Cucumis sativus])

HSP 1 Score: 203.4 bits (516), Expect = 1.4e-48
Identity = 111/151 (73.51%), Postives = 118/151 (78.15%), Query Frame = 0


Query: 1   MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFF 60
           MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPETETTAWLP+ GLSLVCLPWFF
Sbjct: 1   MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPITGLSLVCLPWFF 60

Query: 61  WLLTFFYRVISRACGFRVSIGIGVDVGADNANANNNNNNNNASAESPRHDGGDRVDEEDD 120
           WLLTFFYRV+SRACGFRVS+GIG D                        D G+R D ED+
Sbjct: 61  WLLTFFYRVLSRACGFRVSLGIGAD------------------------DVGER-DNEDN 120

Query: 121 DNGDQRRSNSSSNNSIASRESEMPLAITMGS 152
           +N DQR SNSSSNNSI SRESEMPLAITM S
Sbjct: 121 NNADQRHSNSSSNNSIVSRESEMPLAITMAS 126

[Close]

BLAST of Bhi10G001352 vs. ExPASy TrEMBL
Match: A0A0A0LJX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336080 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.3e-60
Identity = 127/151 (84.11%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFF 60
           MSLVNPSAGRAFIWIVTCFLFFSI+SGGGCLLMYMILPETETTAWLP+ GLSLVCLPWFF
Sbjct: 1   MSLVNPSAGRAFIWIVTCFLFFSILSGGGCLLMYMILPETETTAWLPITGLSLVCLPWFF 60

Query: 61  WLLTFFYRVISRACGFRVSIGIGVDVGADNANANNNNNNNNASAESPRHDGGDRVDEEDD 120
           WLLTFFYRV+SRACGFRVS+GIG DV ++NANANNNNNNN +SAES + D G+R D ED+
Sbjct: 61  WLLTFFYRVLSRACGFRVSLGIGADVSSNNANANNNNNNNASSAESAQQDVGER-DNEDN 120

Query: 121 DNGDQRRSNSSSNNSIASRESEMPLAITMGS 152
           +N DQR SNSSSNNSI SRESEMPLAITM S
Sbjct: 121 NNADQRHSNSSSNNSIVSRESEMPLAITMAS 150

[Close]

BLAST of Bhi10G001352 vs. ExPASy TrEMBL
Match: A0A5A7TCV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00470 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.6e-58
Identity = 126/152 (82.89%), Postives = 136/152 (89.47%), Query Frame = 0


Query: 1   MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFF 60
           MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPE+E+T WLP+ GLSLVCLPWFF
Sbjct: 1   MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPESESTEWLPITGLSLVCLPWFF 60

Query: 61  WLLTFFYRVISRACGFRVSIGIGVDVGADNANANNNNNNNNA-SAESPRHDGGDRVDEED 120
           WLLTFFYRVISRACG+RVS+G G DVG +N N NNNNNNNNA SAESPR D G+R   ED
Sbjct: 61  WLLTFFYRVISRACGYRVSLGTGADVGTNNVNDNNNNNNNNASSAESPRQDVGER-GNED 120

Query: 121 DDNGDQRRSNSSSNNSIASRESEMPLAITMGS 152
           ++N DQR+SNSSSNNSI SRESEMPLAITM S
Sbjct: 121 NNNVDQRKSNSSSNNSIVSRESEMPLAITMAS 151

[Close]

BLAST of Bhi10G001352 vs. ExPASy TrEMBL
Match: A0A1S3CDW9 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103499619 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.2e-58
Identity = 126/152 (82.89%), Postives = 136/152 (89.47%), Query Frame = 0


Query: 1   MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFF 60
           MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPE+E+T WLP+ GLSLVCLPWFF
Sbjct: 1   MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPESESTEWLPITGLSLVCLPWFF 60

Query: 61  WLLTFFYRVISRACGFRVSIGIGVDVGADNANANNNNNNNNA-SAESPRHDGGDRVDEED 120
           WLLTFFYRVISRACG+RVS+G G DVG +N N NNNNNNNNA SAESPR D G+R   ED
Sbjct: 61  WLLTFFYRVISRACGYRVSLGTGEDVGTNNVNDNNNNNNNNASSAESPRQDVGER-GNED 120

Query: 121 DDNGDQRRSNSSSNNSIASRESEMPLAITMGS 152
           ++N DQR+SNSSSNNSI SRESEMPLAITM S
Sbjct: 121 NNNVDQRKSNSSSNNSIVSRESEMPLAITMAS 151

[Close]

BLAST of Bhi10G001352 vs. ExPASy TrEMBL
Match: A0A6J1EV39 (uncharacterized protein LOC111438319 OS=Cucurbita moschata OX=3662 GN=LOC111438319 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.1e-45
Identity = 106/151 (70.20%), Postives = 124/151 (82.12%), Query Frame = 0


Query: 1   MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFF 60
           MSLV+PSAGRAF+W V   LF  I+SGG CLL+Y+ILPETE+TAWLPVAGLSLVCLPWFF
Sbjct: 1   MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFF 60

Query: 61  WLLTFFYRVISRACGFRVSIGIGVDVGADNANANNNNNNNNASAESPRHDGGDRVDEEDD 120
           W+LTFFYRVISRACGFRVS+ +     A++ N ++NNNNNN+S ESPR D   +  EED 
Sbjct: 61  WILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNNNSSGESPRCDARAQA-EEDG 120

Query: 121 DNGDQRRSNSSSNNSIASRESEMPLAITMGS 152
           +N DQRRSN SSNNSI SRESE+P AI+MGS
Sbjct: 121 NNDDQRRSNLSSNNSIMSRESEIPFAISMGS 148

[Close]

BLAST of Bhi10G001352 vs. ExPASy TrEMBL
Match: A0A6J1D6I2 (uncharacterized protein LOC111017503 OS=Momordica charantia OX=3673 GN=LOC111017503 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 5.1e-44
Identity = 109/154 (70.78%), Postives = 120/154 (77.92%), Query Frame = 0


Query: 1   MSLVNPSAGRAFIWIVTCFLFFSIISGGGCLLMYMILPETETTAWLPVAGLSLVCLPWFF 60
           MSLV+PS GRAFIWI+T FLFF I+SGGGCL+MYMILPETETTAWLP+ GLSLVCLPWFF
Sbjct: 1   MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLSLVCLPWFF 60

Query: 61  WLLTFFYRVISRACGFRVSIGIG-VDVGADNANANNNNNNNNASAESPRHDGGDRVDEED 120
           W+LTFFYRVISRACGFRVS+G+G VD GA  A         NAS+ESP   G D  DE+ 
Sbjct: 61  WILTFFYRVISRACGFRVSLGVGVVDGGAGVA---------NASSESPXGPGIDNDDEDG 120

Query: 121 DDN-GDQRR-SNSSSNNSIASRESEMPLAITMGS 152
               GDQ+R S SSS NS  SRESEMPLAITM S
Sbjct: 121 HGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS 145

The following BLAST results are available for this feature:

BLAST of Bhi10G001352 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30770.1	2.2e-23	44.17	Putative membrane lipoprotein	[more]

BLAST of Bhi10G001352 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi10G001352 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900833.1	8.8e-75	100.00	uncharacterized protein LOC120087896 [Benincasa hispida]	[more]
XP_011649431.1	4.7e-60	84.11	putative uncharacterized protein DDB_G0284715 [Cucumis sativus]	[more]
KAA0040748.1	7.5e-58	82.89	hypothetical protein E6C27_scaffold703G00110 [Cucumis melo var. makuwa] >TYK0206...	[more]
XP_008460874.1	1.3e-57	82.89	PREDICTED: putative uncharacterized protein DDB_G0283431 [Cucumis melo]	[more]
KAE8651991.1	1.4e-48	73.51	hypothetical protein Csa_016945 [Cucumis sativus]	[more]

BLAST of Bhi10G001352 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJX6	2.3e-60	84.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336080 PE=4 SV=1	[more]
A0A5A7TCV0	3.6e-58	82.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CDW9	6.2e-58	82.89	Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103499619 PE=4 SV=1	[more]
A0A6J1EV39	2.1e-45	70.20	uncharacterized protein LOC111438319 OS=Cucurbita moschata OX=3662 GN=LOC1114383...	[more]
A0A6J1D6I2	5.1e-44	70.78	uncharacterized protein LOC111017503 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..106
None	No IPR available	PANTHER	PTHR34964	MEMBRANE LIPOPROTEIN-RELATED	coord: 5..149
None	No IPR available	PANTHER	PTHR34964:SF3	MEMBRANE LIPOPROTEIN-RELATED	coord: 5..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M001352	Bhi10M001352	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane