Bhi10G001252 (gene) Wax gourd (B227) v1

Overview
NameBhi10G001252
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr10: 39098223 .. 39098713 (-)
RNA-Seq ExpressionBhi10G001252
SyntenyBhi10G001252
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGATCGTGGAAGCACTAAACCAAATGGTGACAAACCTGAAGAATTTAAAGGTTTCAAATGTCCAAATACATGGACTTGCCCATAATGGTACCAATGAAGGAAATAGGTTTGAAGTGTTCAAAGTATTTTCTTTAAATACAATGTATCTATTATTTTTTTTGTGCATCTTGTTTGTTGCGTCCTGAAATTCCTTGTGACTTGGACCAGACAGAAGACAACAGAATTCACTAGGGATTTGGATGAGTTGGAAATACCGCAAGAGGAAAATGAAAAAGAAAATGAAATTGATAATGGAGAAACAAATGATCAACAACTACGGTCCTGGAGAGACAACAAAGATGATGATGACCAAACACACAAAGTAAACCCCCCTCACCAACCGATTGGACCAACCACCAACGTGACAGAGCAAAGTAACACTCTTGAAAATGAGAGGCAGGAGGGCAAAAGCAAAAGGATGAGGGATCAAAACAGGTATGAATGA

mRNA sequence

ATGGAGGAGATCGTGGAAGCACTAAACCAAATGGTGACAAACCTGAAGAATTTAAAGGTTTCAAATGTCCAAATACATGGACTTGCCCATAATGGTACCAATGAAGGAAATAGACAGAAGACAACAGAATTCACTAGGGATTTGGATGAGTTGGAAATACCGCAAGAGGAAAATGAAAAAGAAAATGAAATTGATAATGGAGAAACAAATGATCAACAACTACGGTCCTGGAGAGACAACAAAGATGATGATGACCAAACACACAAAGTAAACCCCCCTCACCAACCGATTGGACCAACCACCAACGTGACAGAGCAAAGTAACACTCTTGAAAATGAGAGGCAGGAGGGCAAAAGCAAAAGGATGAGGGATCAAAACAGGTATGAATGA

Coding sequence (CDS)

ATGGAGGAGATCGTGGAAGCACTAAACCAAATGGTGACAAACCTGAAGAATTTAAAGGTTTCAAATGTCCAAATACATGGACTTGCCCATAATGGTACCAATGAAGGAAATAGACAGAAGACAACAGAATTCACTAGGGATTTGGATGAGTTGGAAATACCGCAAGAGGAAAATGAAAAAGAAAATGAAATTGATAATGGAGAAACAAATGATCAACAACTACGGTCCTGGAGAGACAACAAAGATGATGATGACCAAACACACAAAGTAAACCCCCCTCACCAACCGATTGGACCAACCACCAACGTGACAGAGCAAAGTAACACTCTTGAAAATGAGAGGCAGGAGGGCAAAAGCAAAAGGATGAGGGATCAAAACAGGTATGAATGA

Protein sequence

MEEIVEALNQMVTNLKNLKVSNVQIHGLAHNGTNEGNRQKTTEFTRDLDELEIPQEENEKENEIDNGETNDQQLRSWRDNKDDDDQTHKVNPPHQPIGPTTNVTEQSNTLENERQEGKSKRMRDQNRYE
Homology
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BLAST of Bhi10G001252 vs. NCBI nr
Match: XP_038902424.1 (uncharacterized protein LOC120089070 [Benincasa hispida])

HSP 1 Score: 241.5 bits (615), Expect = 4.0e-60
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 

Query: 1   MEEIVEALNQMVTNLKNLKVSNVQIHGLAHNGTNEGNRQKTTEFTRDLDELEIPQEENEK 60
           MEEIVEALNQMVTNLKNLKVSNVQIHGLAHNGTNEGNRQKTTEFTRDLDELEIPQEENEK
Sbjct: 1   MEEIVEALNQMVTNLKNLKVSNVQIHGLAHNGTNEGNRQKTTEFTRDLDELEIPQEENEK 60

Query: 61  ENEIDNGETNDQQLRSWRDNKDDDDQTHKVNPPHQPIGPTTNVTEQSNTLENERQEGKSK 120
           ENEIDNGETNDQQLRSWRDNKDDDDQTHKVNPPHQPIGPTTNVTEQSNTLENERQEGKSK
Sbjct: 61  ENEIDNGETNDQQLRSWRDNKDDDDQTHKVNPPHQPIGPTTNVTEQSNTLENERQEGKSK 120

Query: 121 RMRDQNR 128
           RMRDQNR
Sbjct: 121 RMRDQNR 127

The following BLAST results are available for this feature:
BLAST of Bhi10G001252 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi10G001252 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi10G001252 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038902424.14.0e-60100.00uncharacterized protein LOC120089070 [Benincasa hispida][more]
BLAST of Bhi10G001252 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M001252Bhi10M001252mRNA