Bhi10G000339 (gene) Wax gourd (B227) v1

Overview
NameBhi10G000339
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Description30S ribosomal protein S15, chloroplastic
Locationchr10: 9354363 .. 9357431 (+)
RNA-Seq ExpressionBhi10G000339
SyntenyBhi10G000339
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCCGGTGTTGCCGACGTTCCACACTTCGAGCTTCGGTTCGGATCTCTTCAAGTTTGTAGGTTGTTTAAGTTGTTTGCTTGGAAAGGTTTTAAATTGACATTAAAGGGGTACAATGTCGGTTGAAAATCGACATTAAAGATTGTGTTATAAAATGTCTTTCATATAGGTTGTCTTTAATGTCGGTTTTAAACAGACATTATAAGTGTCCAAATTTCGATACCAATTATCTTCAATGTATATCATCTTCAATGTCAGTTTAAAACTGACATTGACATTGTATATCATCTTCAATATCGATTTTTTACCAATTTTTTTTCAATAATTGTCTGATTTTTTTAATGTCTCGTTTTTAAATTGTACAATCCATTTTTAATATTGGTCAAAAAGTTAAAAATGACACTAAATATCTCGTTTTGGGTCAGAAAATGTTCGTTATTGTATTTTATCAAAAAGTATATATAAAAAAATTGTTTATTGTAATGTGTGCTTGTTTATGCATGTTTACTGTTCTGCGTGGCAAGCAAACAACATTTCTCTTCCATCTATAAATGCACAGAACCCAAACCTAAAATATAATAATAGACACAACAATCACTACAAGAATTTTGGTTATTCTCGATGATATTTCTCCTGATGACCAAAAAAGCGTCGGTGGTTGTAACCTCTTATGACGGTAAAAATAAGGGGTCGGGATAAATGTTTATCCCAACGGTCTACGAAAAACCGTCAAGATTTTAAATACTCTTGATGGTCACCTAAGGAACTGTGGGGCTTATTGCACTTTTGCCCGATGGTTATATTCGACCGTCTAGCTTTTTAAACCCATATACTGGAATTTTTATGTTATCCTGACGGTACTCAACAATCGTCGGGAGTTTGTAATCAAGTCTGACGGTTTCCTGTAACCATCGGATATTTTAAGAGTCTTTTGGAATTTTCTGAATGTCGTTGATGGTTGTGTGGTTAATCGTCAAAATTTATTAACTATATCCCGATGATGTTCAGTCAACCGCCGGGCATTCGAAGAGTCTTTTCGAATTTGGTGAACTTTGGCCGACGGTTGTGTCAGAACATCGTCGGGATTGCTAGTATTTATGGAATTTGGTGAACTTCGGCTGATGGTTGTGTCAAACTACCGTCCGGAGTTCCAACTATATCCCGACGATGGTTAGTCAACCGTCAGAGACTCAAAGAGTCTTTTTGAAATTTGGTGAACTTTGGTCGACGGTTGTATCAGACCGCCGTCGAGATTGCGAATCTTTTTAGAATTTGTGAACTTTGGCCGACGGTTGTGTCAGATTACCGTCGGGAATTCCAACTATATCCCATCGGTTATTAGTCAATCATAGGGGATTCGAATAGTCTTTTTGGAATTTGGTGAACTTTGGTCGACGATTGTATCAGACCACCGCGGGGATTGTGAGTCTTTTTAGAATTTGGTGAACTTCGGTCGATGGTTGTGTCAGACTACCATCGGGAGTTTGAAGTTCCATCATGATGAATGGGTGACCGTCGACACTTATCAACTATATCCCAATGGTCTGGCAGACAACTGTTGGGAAAAAGTTCAATATAAATACCGATCCCCAATTCTTCTTATTTCCTCTCTCGATTTCGTTCGTCTGTTTTCTCTCCGACGATTTCGTTCGTCCATTATTCTCTCCATCGATTTTGTTCATCCGTCCCCCTGGCCCCAATTCTTGATTGGAGGGGACACCAAAGGCCTCTGCCCTTCCATCCCTTGGATAGATAAAGAGGGAGGGGAGAACTTTTTTTGGTTTTTTCATGTTGTCAAAGAGTTGAAAGCTCAGTTATTTCGCAAGAAGAAAAAAAAGAAAATGGAGGATCTGTTGAATTTCAAGTAGTCAATTTTACCAATAAGATACGAAGACTTACTCTTGACCGTCTCCCCCTCAAGTGTCGTCCGTCCTCCTCGACCGTCAGACTTCGTTCTTCTCGATTTTGTTCATTCGTCCCCATCGAGTGTCGTTCGATCGCCGTCTCTGATTTCCCCCTCGTCGGATAGGTAACTCTGATTTCCCCTCACTGAACTGTTTTTTTTTTTAATTATTATTCCAATTCTGTTAGCTCTATTATATATAAATAGTTTGAATATGTATGTTAGCTCTATTATGCAAAAATAGTTTAAATAAATGAATATGTATGTTATGTTTGTTTGAATATGTATGAGAAGAAGAAGAAGGTTGATTCATGAACATGTTTGAAAATTATGTATGTTTGTTTGAACATATTTGAAAAAAGGTTGATTGTTATGCTCTATTATTCATGAATATGTATGTGTTTGAAAATTACGTGGGACCCACATCTTTTACTATTTATAATCTCATTGCAATTACACCAATTTAATTATGGTTTGGTTAATGTGGCTTGATAAGTTTTTTATTATGATTTTGACATGTTATTAACACCATAAAAAAATCTCACTTTTTTATTCAATTATAATGAATTTTCATTATAATTAGATCAGTGCATAAATAAAACTAATATGAAAGATTCAACACATAACCAGAACCCTTTTCTTGAGATAAGCTAACTATAACATTAATATCAATACACATTCAATTTGATCAATCAATTGTTAATCTATAGCAAATTAGACACTAAGAATTAGTAGATTCTTATCTTAAATTCGATCATTTTGATCCATAAAAATTAAATAAAAATGAAAATGAAAATGAATCATAATGGTCACCTTCTTAAAGTAAGAAAACTGAAATGAACATCGAAAATAAAAGAACTAAAATAAATCAAAGACGAAAATGTGAATTAGTAGATTCTTATCTTAAATTCTATCATTAGCTAGATTGGACGAACAGGACGCCAGAAGACAATCTGAGATGGAGGATATGAAAGCTATGCTCTTACAGCTCATGAAAGATAGATCGAACTAGGTATGAGCTCTTCGACTTTCATAGTAAACTTAATTATAAGATTGTGTATGTTGTTATCCTGCAGTTATGGTAACAACATAAACGTATAGTTATGTAAAGTATAGTTAATGTTCTGAAGTTGAGTTTGAATTTCATTTTATACTAAATTAGATGATT

mRNA sequence

GTCCGGTGTTGCCGACGTTCCACACTTCGAGCTTCGGTTCGGATCTCTTCAAGTTTAGTTGAAAGCTCAGTTATTTCGCAAGAAGAAAAAAAAGAAAATGGAGGATCTGTTGAATTTCAAGTAGTCAATTTTACCAATAAGATACGAAGACTTACTCTTGACCGTCTCCCCCTCAATTATGATGATT

Coding sequence (CDS)

GTCCGGTGTTGCCGACGTTCCACACTTCGAGCTTCGGTTCGGATCTCTTCAAGTTTAGTTGAAAGCTCAGTTATTTCGCAAGAAGAAAAAAAAGAAAATGGAGGATCTGTTGAATTTCAAGTAGTCAATTTTACCAATAAGATACGAAGACTTACTCTTGACCGTCTCCCCCTCAATTATGATGATT

Protein sequence

VRCCRRSTLRASVRISSSLVESSVISQEEKKENGGSVEFQVVNFTNKIRRLTLDRLPLNYDD
Homology
[Close]
BLAST of Bhi10G000339 vs. TAIR 10
Match: ATCG01120.1 (chloroplast ribosomal protein S15 )

HSP 1 Score: 43.1 bits (100), Expect = 9.3e-05
Identity = 22/35 (62.86%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 19 LVESSVIS-QEEKKENGGSVEFQVVNFTNKIRRLT 53
          ++++ VIS +E+K+E+ GSVEFQV +FTNKIRRLT
Sbjct: 1  MIKNIVISFEEQKEESRGSVEFQVFSFTNKIRRLT 35

[Close]
BLAST of Bhi10G000339 vs. ExPASy Swiss-Prot
Match: Q4VZL1 (30S ribosomal protein S15, chloroplastic OS=Cucumis sativus OX=3659 GN=rps15 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.4e-08
Identity = 30/31 (96.77%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 22 SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 53
          SSVISQEEKKENGGSVEFQVV+FTNKIRRLT
Sbjct: 7  SSVISQEEKKENGGSVEFQVVSFTNKIRRLT 37

[Close]
BLAST of Bhi10G000339 vs. ExPASy Swiss-Prot
Match: Q14FA1 (30S ribosomal protein S15, chloroplastic OS=Populus alba OX=43335 GN=rps15 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.3e-06
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 15 ISSSLVESSVISQEEKKENGGSVEFQVVNFTNKIRRLT 53
          + SS +  S+ISQE+KKEN GSVEFQ+V+FTNKIRRLT
Sbjct: 2  VKSSFI--SIISQEDKKENKGSVEFQIVSFTNKIRRLT 37

[Close]
BLAST of Bhi10G000339 vs. ExPASy Swiss-Prot
Match: A4GYX3 (30S ribosomal protein S15, chloroplastic OS=Populus trichocarpa OX=3694 GN=rps15 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.3e-06
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 15 ISSSLVESSVISQEEKKENGGSVEFQVVNFTNKIRRLT 53
          + SS +  S+ISQE+KKEN GSVEFQ+V+FTNKIRRLT
Sbjct: 2  VKSSFI--SIISQEDKKENKGSVEFQIVSFTNKIRRLT 37

[Close]
BLAST of Bhi10G000339 vs. ExPASy Swiss-Prot
Match: B1NWK6 (30S ribosomal protein S15, chloroplastic OS=Manihot esculenta OX=3983 GN=rps15 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.7e-06
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 23 SVISQEEKKENGGSVEFQVVNFTNKIRRLT 53
          SVISQEEK EN GSVEFQ+V+FTNKIRRLT
Sbjct: 8  SVISQEEKDENKGSVEFQIVSFTNKIRRLT 37

[Close]
BLAST of Bhi10G000339 vs. ExPASy Swiss-Prot
Match: Q09FY9 (30S ribosomal protein S15, chloroplastic OS=Platanus occidentalis OX=4403 GN=rps15 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 2.2e-06
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 23 SVISQEEKKENGGSVEFQVVNFTNKIRRLT 53
          SVISQEEK+EN GS EFQV NFTNKIRRLT
Sbjct: 8  SVISQEEKEENKGSAEFQVFNFTNKIRRLT 37

[Close]
BLAST of Bhi10G000339 vs. NCBI nr
Match: YP_009753921.1 (ribosomal protein S15 [Trichosanthes lobata] >QIT05869.1 ribosomal protein S15 [Trichosanthes lobata])

HSP 1 Score: 61.6 bits (148), Expect = 2.7e-06
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 22 SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 53
          SSVISQEEKKENGGSVEFQVVNFTNKIRRLT
Sbjct: 7  SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 37

[Close]
BLAST of Bhi10G000339 vs. NCBI nr
Match: YP_009752037.1 (ribosomal protein S15 [Cionosicys macranthus] >QIT05278.1 ribosomal protein S15 [Cionosicys macranthus])

HSP 1 Score: 61.6 bits (148), Expect = 2.7e-06
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 22 SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 53
          SSVISQEEKKENGGSVEFQVVNFTNKIRRLT
Sbjct: 7  SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 37

[Close]
BLAST of Bhi10G000339 vs. NCBI nr
Match: YP_010131141.1 (ribosomal protein S15 [Benincasa hispida] >QPZ75789.1 ribosomal protein S15 [Benincasa hispida] >QSQ72368.1 ribosomal protein S15 [Benincasa hispida])

HSP 1 Score: 61.6 bits (148), Expect = 2.7e-06
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 22 SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 53
          SSVISQEEKKENGGSVEFQVVNFTNKIRRLT
Sbjct: 7  SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 37

[Close]
BLAST of Bhi10G000339 vs. NCBI nr
Match: YP_009560892.1 (ribosomal protein S15 [Trichosanthes kirilowii] >YP_009752299.1 ribosomal protein S15 [Trichosanthes baviensis] >YP_009752468.1 ribosomal protein S15 [Trichosanthes tricuspidata] >YP_009752628.1 ribosomal protein S15 [Trichosanthes homophylla] >YP_009753230.1 ribosomal protein S15 [Trichosanthes truncata] >YP_009753667.1 ribosomal protein S15 [Trichosanthes wallichiana] >YP_009753761.1 ribosomal protein S15 [Trichosanthes nervifolia] >YP_009753836.1 ribosomal protein S15 [Trichosanthes pilosa] >QJD26528.1 ribosomal protein S15 [Trichosanthes kirilowii var. japonica] >QJD26702.1 ribosomal protein S15 [Trichosanthes rosthornii] >QAB33243.1 ribosomal protein S15 [Trichosanthes kirilowii] >QIT04273.1 ribosomal protein S15 [Trichosanthes baviensis] >QIT04686.1 ribosomal protein S15 [Trichosanthes wallichiana])

HSP 1 Score: 61.6 bits (148), Expect = 2.7e-06
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 22 SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 53
          SSVISQEEKKENGGSVEFQVVNFTNKIRRLT
Sbjct: 7  SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 37

[Close]
BLAST of Bhi10G000339 vs. NCBI nr
Match: YP_009753051.1 (ribosomal protein S15 [Gerrardanthus macrorhizus] >QIT06123.1 ribosomal protein S15 [Gerrardanthus macrorhizus])

HSP 1 Score: 60.5 bits (145), Expect = 6.1e-06
Identity = 30/31 (96.77%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 22 SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 53
          SSVISQEEKKENGGSVEFQV+NFTNKIRRLT
Sbjct: 7  SSVISQEEKKENGGSVEFQVLNFTNKIRRLT 37

[Close]
BLAST of Bhi10G000339 vs. ExPASy TrEMBL
Match: A0A410HFE2 (30S ribosomal protein S15, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=rps15 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-06
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 22 SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 53
          SSVISQEEKKENGGSVEFQVVNFTNKIRRLT
Sbjct: 7  SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 37

[Close]
BLAST of Bhi10G000339 vs. ExPASy TrEMBL
Match: A0A6M3RUA6 (30S ribosomal protein S15, chloroplastic OS=Trichosanthes kirilowii var. japonica OX=61011 GN=rps15 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-06
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 22 SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 53
          SSVISQEEKKENGGSVEFQVVNFTNKIRRLT
Sbjct: 7  SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 37

[Close]
BLAST of Bhi10G000339 vs. ExPASy TrEMBL
Match: A0A7T3QNM4 (Ribosomal protein S15 OS=Benincasa hispida OX=102211 GN=rps15 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-06
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 22 SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 53
          SSVISQEEKKENGGSVEFQVVNFTNKIRRLT
Sbjct: 7  SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 37

[Close]
BLAST of Bhi10G000339 vs. ExPASy TrEMBL
Match: A0A6H0ET41 (30S ribosomal protein S15, chloroplastic OS=Trichosanthes tricuspidata OX=654837 GN=rps15 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-06
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 22 SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 53
          SSVISQEEKKENGGSVEFQVVNFTNKIRRLT
Sbjct: 7  SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 37

[Close]
BLAST of Bhi10G000339 vs. ExPASy TrEMBL
Match: A0A6H0EQQ3 (30S ribosomal protein S15, chloroplastic OS=Trichosanthes baviensis OX=1054457 GN=rps15 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-06
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 22 SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 53
          SSVISQEEKKENGGSVEFQVVNFTNKIRRLT
Sbjct: 7  SSVISQEEKKENGGSVEFQVVNFTNKIRRLT 37

The following BLAST results are available for this feature:
BLAST of Bhi10G000339 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG01120.19.3e-0562.86chloroplast ribosomal protein S15 [more]
BLAST of Bhi10G000339 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q4VZL11.4e-0896.7730S ribosomal protein S15, chloroplastic OS=Cucumis sativus OX=3659 GN=rps15 PE=... [more]
Q14FA11.3e-0671.0530S ribosomal protein S15, chloroplastic OS=Populus alba OX=43335 GN=rps15 PE=3 ... [more]
A4GYX31.3e-0671.0530S ribosomal protein S15, chloroplastic OS=Populus trichocarpa OX=3694 GN=rps15... [more]
B1NWK61.7e-0686.6730S ribosomal protein S15, chloroplastic OS=Manihot esculenta OX=3983 GN=rps15 P... [more]
Q09FY92.2e-0686.6730S ribosomal protein S15, chloroplastic OS=Platanus occidentalis OX=4403 GN=rps... [more]
BLAST of Bhi10G000339 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009753921.12.7e-06100.00ribosomal protein S15 [Trichosanthes lobata] >QIT05869.1 ribosomal protein S15 [... [more]
YP_009752037.12.7e-06100.00ribosomal protein S15 [Cionosicys macranthus] >QIT05278.1 ribosomal protein S15 ... [more]
YP_010131141.12.7e-06100.00ribosomal protein S15 [Benincasa hispida] >QPZ75789.1 ribosomal protein S15 [Ben... [more]
YP_009560892.12.7e-06100.00ribosomal protein S15 [Trichosanthes kirilowii] >YP_009752299.1 ribosomal protei... [more]
YP_009753051.16.1e-0696.77ribosomal protein S15 [Gerrardanthus macrorhizus] >QIT06123.1 ribosomal protein ... [more]
BLAST of Bhi10G000339 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A410HFE21.3e-06100.0030S ribosomal protein S15, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=r... [more]
A0A6M3RUA61.3e-06100.0030S ribosomal protein S15, chloroplastic OS=Trichosanthes kirilowii var. japonic... [more]
A0A7T3QNM41.3e-06100.00Ribosomal protein S15 OS=Benincasa hispida OX=102211 GN=rps15 PE=4 SV=1[more]
A0A6H0ET411.3e-06100.0030S ribosomal protein S15, chloroplastic OS=Trichosanthes tricuspidata OX=654837... [more]
A0A6H0EQQ31.3e-06100.0030S ribosomal protein S15, chloroplastic OS=Trichosanthes baviensis OX=1054457 G... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.10coord: 19..56
e-value: 4.0E-6
score: 28.8

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi10M000339Bhi10M000339mRNA