Bhi10G000135 (gene) Wax gourd (B227) v1

Overview


Name	Bhi10G000135
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Protein GL2-INTERACTING REPRESSOR 2
Location	chr10: 3937266 .. 3938402 (+)
RNA-Seq Expression	Bhi10G000135
Synteny	Bhi10G000135

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTGATCATTATTTAGTTTTGTTAGGTTTGAATCATCATAATTCAGAAATCCTTCCTTTTTAATTCCCCTTTCCCTCTCCCTTCCGTTCTCCACTTTGTTCTTTTTTTCTTTCGTTACTTCAAAATCACATTGCGTAAGCCCTCTCTCAACTCATGCATTATTATTCTATACGTCAATTTCATTGTTAACTCTTTTCTCTCTTTCTTTTTCAGAAAATGAGCAAGAGATCCCGAAGTAGCGAGGCGGAGGTGGAGTTGAGAGTGAACTTGAACCAGTCACCAGCCACGTCATCTTCGTCTTCATCGGTCAGCACATTTGGAGGGTCGCAGATATCGGTGGGGAATTCGTGCTTGTCGTCATGGGAGAGAGAAGAAGATGTTGGATTGGAAGAGATAATAACAAGATCGATGATGCTCGTAGGATGTCCGGGGTGTTTCATGTACGTGATGTTGACAGACAAGAGCTCCCAATGCCCAAAATGCAAGAACAATGTGTTTCTTGATTTCTTCAAGCAACAACCAAATCATGCCTAGCTTAGCCCACTTATATCCAATTATTATTATTTTTGGTACTCTTTTTCCAATTCTCATCATATTTCTTAACTTAATCTAGGCTAAGCTAAGCTGCATCCTTTTCATTATTATTCCGTTTCGTTGGTGTGGGTTCTTATATTATATATATATATATATATATATATATATATATAATATAACGTTGTCCACTATGAAACCTAGGATTATTAACCTTTTTTCTGTATGAATTGGCTGAAATTTCCAAAGATTTCTCTCTCATCCATATGTTCTTGTCTTGCCGTCGTTGTGTCATTAATTAACATGCAAACTGTTTCTGTGTTTTCAGTTTCACATATGTGTGGATAATGGAATCCATACACGTTATTCGAGAACAAATCTCACTCAAAAATTTCGTTACAATGTAATGAAAAGTTTTGAATGGTTAGATGTATGAGAAAAAAGCAACAAATGATTATTACAAGTATTCAAATTTTTAATTATACATCCAAGATATATTTAGAACATAGTATCACTCTCACATTTAATAATTTTGTGTGTTTAGAATCTTCACTTAGATATTATATTGAACAAATTATTTTTCTGTCATTTTCAAAATCTGAA

mRNA sequence

CTCTCTGATCATTATTTAGTTTTGTTAGGTTTGAATCATCATAATTCAGAAATCCTTCCTTTTTAATTCCCCTTTCCCTCTCCCTTCCGTTCTCCACTTTGTTCTTTTTTTCTTTCGTTACTTCAAAATCACATTGCAAAATGAGCAAGAGATCCCGAAGTAGCGAGGCGGAGGTGGAGTTGAGAGTGAACTTGAACCAGTCACCAGCCACGTCATCTTCGTCTTCATCGGTCAGCACATTTGGAGGGTCGCAGATATCGGTGGGGAATTCGTGCTTGTCGTCATGGGAGAGAGAAGAAGATGTTGGATTGGAAGAGATAATAACAAGATCGATGATGCTCGTAGGATGTCCGGGGTGTTTCATGTACGTGATGTTGACAGACAAGAGCTCCCAATGCCCAAAATGCAAGAACAATGTGTTTCTTGATTTCTTCAAGCAACAACCAAATCATGCCTAGCTTAGCCCACTTATATCCAATTATTATTATTTTTGGTACTCTTTTTCCAATTCTCATCATATTTCTTAACTTAATCTAGGCTAAGCTAAGCTGCATCCTTTTCATTATTATTCCGTTTCGTTGGTGTGGGTTCTTATATTATATATATATATATATATATATATATATATATAATATAACGTTGTCCACTATGAAACCTAGGATTATTAACCTTTTTTCTGTATGAATTGGCTGAAATTTCCAAAGATTTCTCTCTCATCCATATGTTCTTGTCTTGCCGTCGTTGTGTCATTAATTAACATGCAAACTGTTTCTGTGTTTTCAGTTTCACATATGTGTGGATAATGGAATCCATACACGTTATTCGAGAACAAATCTCACTCAAAAATTTCGTTACAATGTAATGAAAAGTTTTGAATGGTTAGATGTATGAGAAAAAAGCAACAAATGATTATTACAAGTATTCAAATTTTTAATTATACATCCAAGATATATTTAGAACATAGTATCACTCTCACATTTAATAATTTTGTGTGTTTAGAATCTTCACTTAGATATTATATTGAACAAATTATTTTTCTGTCATTTTCAAAATCTGAA

Coding sequence (CDS)

ATGAGCAAGAGATCCCGAAGTAGCGAGGCGGAGGTGGAGTTGAGAGTGAACTTGAACCAGTCACCAGCCACGTCATCTTCGTCTTCATCGGTCAGCACATTTGGAGGGTCGCAGATATCGGTGGGGAATTCGTGCTTGTCGTCATGGGAGAGAGAAGAAGATGTTGGATTGGAAGAGATAATAACAAGATCGATGATGCTCGTAGGATGTCCGGGGTGTTTCATGTACGTGATGTTGACAGACAAGAGCTCCCAATGCCCAAAATGCAAGAACAATGTGTTTCTTGATTTCTTCAAGCAACAACCAAATCATGCCTAG

Protein sequence

MSKRSRSSEAEVELRVNLNQSPATSSSSSSVSTFGGSQISVGNSCLSSWEREEDVGLEEIITRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFKQQPNHA

Homology

[Close]

BLAST of Bhi10G000135 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 1.4e-13
Identity = 44/100 (44.00%), Postives = 66/100 (66.00%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNQSPATSSSSSSVSTFGGSQISVGNSCLSSWEREEDVGLEEI 60
           MS+R+++   ++ELR+NL+  P+ +S  S V +   S  +  +SC+SS   +E+    E 
Sbjct: 1   MSRRNKNG-PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEE---NET 60

Query: 61  ITRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFKQ 101
           IT SM+LVGCP C MYVML+D   +CPKCK+ V LDF ++
Sbjct: 61  IT-SMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQE 95

[Close]

BLAST of Bhi10G000135 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 2.5e-10
Identity = 42/108 (38.89%), Postives = 58/108 (53.70%), Query Frame = 0


Query: 8   SEAEVELRVNLNQSPATSSS-------SSSVSTFGGSQISVGNSCLSSWEREEDVGLEEI 67
           S    +L + LN SP TSS        S S +T   S  S  +SC+SS   +++  +   
Sbjct: 2   SRRSPKLELKLNLSPPTSSQRRMVRSPSRSATT---SPTSPPSSCVSSEMNQDEPSVRYS 61

Query: 68  I---TRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFKQQPNHA 106
               T SM+LVGCP C MYVML++   +CPKCK+ V LDF  +   +A
Sbjct: 62  TSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNA 106

[Close]

BLAST of Bhi10G000135 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 2.7e-04
Identity = 30/94 (31.91%), Postives = 51/94 (54.26%), Query Frame = 0


Query: 5  SRSSEAEVELRVNLNQSPATSSSSSSVSTFGGSQISVGNSCLSSWEREEDVGLEEIITRS 64
          ++ + + + L + LN SP+  SS  + S+         +S L S E E   G      +S
Sbjct: 2  NQEAASNLGLDLKLNISPSLDSSLLTESS---------SSSLCSEEAEGGGG----EAKS 61

Query: 65 MMLVGCPGCFMYVMLT-DKSSQCPKCKNNVFLDF 98
          M++VGCP C MY++ + +   +CP+C ++V LDF
Sbjct: 62 MVVVGCPNCIMYIITSLENDPRCPRCNSHVLLDF 82

[Close]

BLAST of Bhi10G000135 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 6.0e-04
Identity = 25/71 (35.21%), Postives = 38/71 (53.52%), Query Frame = 0


Query: 20 QSPATSSSSSSVSTFGGSQISVGNSCLSSWEREEDVGLEEIITRSMMLVGCPGCFMYVML 79
          +SP++ +SSS  S    ++  V     SSW  EE+          M+++GC  C MYVM+
Sbjct: 30 RSPSSDTSSSQNSCLTRTE-EVKEEVASSWVDEEE-------APEMVVMGCRSCMMYVMV 89

Query: 80 TDKSSQCPKCK 91
            +  +CPKCK
Sbjct: 90 LQERQRCPKCK 92

[Close]

BLAST of Bhi10G000135 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-12
Identity = 44/100 (44.00%), Postives = 66/100 (66.00%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNQSPATSSSSSSVSTFGGSQISVGNSCLSSWEREEDVGLEEI 60
           MS+R+++   ++ELR+NL+  P+ +S  S V +   S  +  +SC+SS   +E+    E 
Sbjct: 1   MSRRNKNG-PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEE---NET 60

Query: 61  ITRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFKQ 101
           IT SM+LVGCP C MYVML+D   +CPKCK+ V LDF ++
Sbjct: 61  IT-SMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQE 95

[Close]

BLAST of Bhi10G000135 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.5e-09
Identity = 42/108 (38.89%), Postives = 58/108 (53.70%), Query Frame = 0


Query: 8   SEAEVELRVNLNQSPATSSS-------SSSVSTFGGSQISVGNSCLSSWEREEDVGLEEI 67
           S    +L + LN SP TSS        S S +T   S  S  +SC+SS   +++  +   
Sbjct: 2   SRRSPKLELKLNLSPPTSSQRRMVRSPSRSATT---SPTSPPSSCVSSEMNQDEPSVRYS 61

Query: 68  I---TRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFKQQPNHA 106
               T SM+LVGCP C MYVML++   +CPKCK+ V LDF  +   +A
Sbjct: 62  TSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNA 106

[Close]

BLAST of Bhi10G000135 vs. NCBI nr
Match: KGN48041.1 (hypothetical protein Csa_002820 [Cucumis sativus])

HSP 1 Score: 166.4 bits (420), Expect = 1.3e-37
Identity = 90/110 (81.82%), Postives = 94/110 (85.45%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNQSPATSSSSSSVSTF-----GGSQISVGNSCLSSWEREEDV 60
           MSKRSRSSEAEVELRVNLN+SP  SSSSSSVSTF     G S+ISVGNSCLS    E   
Sbjct: 1   MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFDGSGSGSSEISVGNSCLSCEGEEHGG 60

Query: 61  GLEEIITRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFKQQPNHA 106
            LEEIITRSMMLVGCPGCFMYVMLT+KSSQCPKCKNNVFLDFFKQQP+HA
Sbjct: 61  RLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHHA 110

[Close]

BLAST of Bhi10G000135 vs. NCBI nr
Match: KAA0061725.1 (hypothetical protein E6C27_scaffold212G001000 [Cucumis melo var. makuwa] >TYJ96061.1 hypothetical protein E5676_scaffold182G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 164.5 bits (415), Expect = 5.1e-37
Identity = 88/105 (83.81%), Postives = 92/105 (87.62%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNQSPATSSSSSSVSTFGGSQISVGNSCLSSWEREEDVG-LEE 60
           MSKRSRSSEAEVELRVNLNQSP TSSSSSSVSTFGGS    G+SCLS    ++  G LEE
Sbjct: 1   MSKRSRSSEAEVELRVNLNQSPTTSSSSSSVSTFGGSGSGSGDSCLSCEGEDQHGGRLEE 60

Query: 61  IITRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFKQQPNH 105
           IITRSMMLVGCPGCFMYVMLT+KSSQCPKCKNNVFLDFFKQQP H
Sbjct: 61  IITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPQH 105

[Close]

BLAST of Bhi10G000135 vs. NCBI nr
Match: KAG7035922.1 (hypothetical protein SDJN02_02722, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137.1 bits (344), Expect = 8.6e-29
Identity = 78/113 (69.03%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNQSPATSSSSSSVSTFGGSQ------ISVGNSCLSSW--ERE 60
           MSKR RSSE EV LRV++N+SP T    SS+S FGGS+      +SV +SCLS W  E E
Sbjct: 1   MSKRPRSSETEVALRVDMNRSPTT----SSMSMFGGSESGLGSDVSVESSCLSLWDGEVE 60

Query: 61  EDVGLEEIITRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFKQQPNHA 106
           ED   E I+TRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFF QQ +HA
Sbjct: 61  ED---EMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFNQQKHHA 106

[Close]

BLAST of Bhi10G000135 vs. NCBI nr
Match: KAG6605971.1 (hypothetical protein SDJN03_03288, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137.1 bits (344), Expect = 8.6e-29
Identity = 78/113 (69.03%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNQSPATSSSSSSVSTFGGSQ------ISVGNSCLSSW--ERE 60
           MSKR RSSE EV LRV++N+SP T    SS+S FGGS+      +SV +SCLS W  E E
Sbjct: 86  MSKRPRSSETEVALRVDMNRSPTT----SSMSMFGGSESGLGSDVSVESSCLSLWDGEVE 145

Query: 61  EDVGLEEIITRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFKQQPNHA 106
           ED   E I+TRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFF QQ +HA
Sbjct: 146 ED---EMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFNQQKHHA 191

[Close]

BLAST of Bhi10G000135 vs. NCBI nr
Match: KAG6570472.1 (NAC domain-containing protein 40, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 127.9 bits (320), Expect = 5.2e-26
Identity = 77/103 (74.76%), Postives = 82/103 (79.61%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNQ--SPATSSSSSSVSTFGGSQISVGNSCLSSWEREEDVGLE 60
           MSKRSRSSE +VELRVNLN+  SPATSS S S S+   S ISV NSCL  WE   +   E
Sbjct: 486 MSKRSRSSEPKVELRVNLNRLPSPATSSLSGSGSS---SDISVENSCL-GWEGGVE---E 545

Query: 61  EIITRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFKQQ 102
           EIITRSMMLVGCPGCFMYVMLT+KSSQCPKC NNVFLDFFK Q
Sbjct: 546 EIITRSMMLVGCPGCFMYVMLTEKSSQCPKCHNNVFLDFFKHQ 581

[Close]

BLAST of Bhi10G000135 vs. ExPASy TrEMBL
Match: A0A0A0KJX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425780 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.4e-38
Identity = 90/110 (81.82%), Postives = 94/110 (85.45%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNQSPATSSSSSSVSTF-----GGSQISVGNSCLSSWEREEDV 60
           MSKRSRSSEAEVELRVNLN+SP  SSSSSSVSTF     G S+ISVGNSCLS    E   
Sbjct: 1   MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFDGSGSGSSEISVGNSCLSCEGEEHGG 60

Query: 61  GLEEIITRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFKQQPNHA 106
            LEEIITRSMMLVGCPGCFMYVMLT+KSSQCPKCKNNVFLDFFKQQP+HA
Sbjct: 61  RLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHHA 110

[Close]

BLAST of Bhi10G000135 vs. ExPASy TrEMBL
Match: A0A5D3BBS4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00200 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.4e-37
Identity = 88/105 (83.81%), Postives = 92/105 (87.62%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNQSPATSSSSSSVSTFGGSQISVGNSCLSSWEREEDVG-LEE 60
           MSKRSRSSEAEVELRVNLNQSP TSSSSSSVSTFGGS    G+SCLS    ++  G LEE
Sbjct: 1   MSKRSRSSEAEVELRVNLNQSPTTSSSSSSVSTFGGSGSGSGDSCLSCEGEDQHGGRLEE 60

Query: 61  IITRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFKQQPNH 105
           IITRSMMLVGCPGCFMYVMLT+KSSQCPKCKNNVFLDFFKQQP H
Sbjct: 61  IITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPQH 105

[Close]

BLAST of Bhi10G000135 vs. ExPASy TrEMBL
Match: A0A2I4FHX4 (uncharacterized protein LOC108998926 OS=Juglans regia OX=51240 GN=LOC108998926 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.6e-12
Identity = 45/105 (42.86%), Postives = 66/105 (62.86%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNQSPATSSSSSSVSTFGGSQISVGNSCLSSWEREEDVGLE-- 60
           MSKR+   + E+EL ++  +   + + S +VS F  S+ISV  SC+SS   ++ + L+  
Sbjct: 1   MSKRANGPKLELELNLSPPRREHSPAESLNVSNFSSSEISVEGSCVSSEPEDQPMTLQYS 60

Query: 61  --EIITRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFKQQ 102
                 RSMMLVGCP C MYVML++   +CPKCK+ V LDF K++
Sbjct: 61  PSNAEPRSMMLVGCPRCLMYVMLSEADPKCPKCKSTVLLDFLKEE 105

[Close]

BLAST of Bhi10G000135 vs. ExPASy TrEMBL
Match: A0A660KQ11 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009974 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.3e-11
Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVN-------LNQSPATSSSSSSVSTFGGSQISVGNSCLSSWEREE 60
           MS+R  S + E+EL ++        +QSP  S+SSSS S+   S +SV  SC+SS   E 
Sbjct: 1   MSRREDSPKLELELNLSPPRGNTPADQSPNVSTSSSSSSS---SDMSVEGSCVSSEPGES 60

Query: 61  DVGLEEII--TRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFKQQPN 104
            V     +   +SMMLVGCP C MYVML+D + +CPKCK+ V LDF K++ N
Sbjct: 61  TVYTPRNLEAAQSMMLVGCPRCLMYVMLSDVNPKCPKCKSTVLLDFLKEEEN 109

[Close]

BLAST of Bhi10G000135 vs. ExPASy TrEMBL
Match: A0A4P1R0I2 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_17077 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 5.7e-10
Identity = 47/115 (40.87%), Postives = 66/115 (57.39%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNQSPATSSSSSSVSTFG-----------GSQISVGNSCLSSW 60
           MSKR+RS   E+ L ++  ++P +SS S+ +S               S  S G+SC+SS 
Sbjct: 1   MSKRARSPRLELRLNLSPPRTPTSSSISADISLLDFSILSSPTLTVSSHSSEGSSCVSS- 60

Query: 61  EREEDVGLEEIITRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFKQQPNH 105
           E EE        TR+M+LVGCP C MYVML++   +CPKCK+ V LDF   + N+
Sbjct: 61  EAEE--------TRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENN 106

The following BLAST results are available for this feature:

BLAST of Bhi10G000135 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11600.1	1.4e-13	44.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G06270.1	2.5e-10	38.89	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G22270.1	2.7e-04	31.91	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52561.1	6.0e-04	35.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

BLAST of Bhi10G000135 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRN4	2.0e-12	44.00	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]
Q9FNI1	3.5e-09	38.89	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]

BLAST of Bhi10G000135 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN48041.1	1.3e-37	81.82	hypothetical protein Csa_002820 [Cucumis sativus]	[more]
KAA0061725.1	5.1e-37	83.81	hypothetical protein E6C27_scaffold212G001000 [Cucumis melo var. makuwa] >TYJ960...	[more]
KAG7035922.1	8.6e-29	69.03	hypothetical protein SDJN02_02722, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6605971.1	8.6e-29	69.03	hypothetical protein SDJN03_03288, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6570472.1	5.2e-26	74.76	NAC domain-containing protein 40, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of Bhi10G000135 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJX5	6.4e-38	81.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425780 PE=4 SV=1	[more]
A0A5D3BBS4	2.4e-37	83.81	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A2I4FHX4	4.6e-12	42.86	uncharacterized protein LOC108998926 OS=Juglans regia OX=51240 GN=LOC108998926 P...	[more]
A0A660KQ11	2.3e-11	45.54	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009974 PE=4 SV=1	[more]
A0A4P1R0I2	5.7e-10	40.87	Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_17077 PE=4 S...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR33177:SF46	SUBFAMILY NOT NAMED	coord: 1..104
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M000135	Bhi10M000135	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080147	root hair cell development
molecular_function	GO:0005515	protein binding