Bhi09G003017 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G003017
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Auxin-responsive family protein
Location	chr9: 92080553 .. 92081316 (-)
RNA-Seq Expression	Bhi09G003017
Synteny	Bhi09G003017

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAATGGGTGATGATCTGGTTGGCAAAAAATGTAGTGATACTGATATATATATCACCAAAAAACAGAGACTTTCCACCAAAATCCCAACCCCCTCTTTCTCCTCTTTTTTTTTATTATTTTTTTTATTTTTATTTTTTTTAATATCTTATTTACCACTCAATTTGAGAGTCTCCTTCAAGTCTCTTATATAATCTCCCTCAAATTATCCATATTCCCTCTCTAAAAAATCCTCCACAAAAAAATGAAGAAAATAAATTATCTATTGAGAAAATGCAAGAGCCTTTCAAGGCAATTGGGAAGATCCTCTTCATATAGCAGCCTGAGATCAAAATCCACAAGAGAAGATCTTTGGGTTTGTGGAACAAAAATGGAAGAAGAAGATTTTGAGCAGCAAAAGCAGCAACTTGAAAAGGTGAGTGGCAATGATGTAATTTTATATGTTGGAAGCACAAGGAAGAGATATGCAATAAGTTCTAAGTATTTGAGCCATCCTTTGCTAAATGCTCTTATTGACAAATCCAAGTCTAAGAAATTATTAGCTAATGATGATGATGAAGAAGAAGATTGTATTTCTGTCAGATGTGAAGTTGTTCTATTCGATCATCTCTTGTGGATGTTGGAAAATTCTGATCCAAATATTAGTTTCGATTCTAATTTGGAGGAATTGGCTGAGCTTTATGTTTTTTGAATTCCATGTATCCAAAATTAGTAGGAGTTGTTACGTATCAGAGTTTTGTTTGGTGACGTTTTTGTTTTGAGAAG

mRNA sequence

TCAAATGGGTGATGATCTGGTTGGCAAAAAATGTAGTGATACTGATATATATATCACCAAAAAACAGAGACTTTCCACCAAAATCCCAACCCCCTCTTTCTCCTCTTTTTTTTTATTATTTTTTTTATTTTTATTTTTTTTAATATCTTATTTACCACTCAATTTGAGAGTCTCCTTCAAGTCTCTTATATAATCTCCCTCAAATTATCCATATTCCCTCTCTAAAAAATCCTCCACAAAAAAATGAAGAAAATAAATTATCTATTGAGAAAATGCAAGAGCCTTTCAAGGCAATTGGGAAGATCCTCTTCATATAGCAGCCTGAGATCAAAATCCACAAGAGAAGATCTTTGGGTTTGTGGAACAAAAATGGAAGAAGAAGATTTTGAGCAGCAAAAGCAGCAACTTGAAAAGGTGAGTGGCAATGATGTAATTTTATATGTTGGAAGCACAAGGAAGAGATATGCAATAAGTTCTAAGTATTTGAGCCATCCTTTGCTAAATGCTCTTATTGACAAATCCAAGTCTAAGAAATTATTAGCTAATGATGATGATGAAGAAGAAGATTGTATTTCTGTCAGATGTGAAGTTGTTCTATTCGATCATCTCTTGTGGATGTTGGAAAATTCTGATCCAAATATTAGTTTCGATTCTAATTTGGAGGAATTGGCTGAGCTTTATGTTTTTTGAATTCCATGTATCCAAAATTAGTAGGAGTTGTTACGTATCAGAGTTTTGTTTGGTGACGTTTTTGTTTTGAGAAG

Coding sequence (CDS)

ATGAAGAAAATAAATTATCTATTGAGAAAATGCAAGAGCCTTTCAAGGCAATTGGGAAGATCCTCTTCATATAGCAGCCTGAGATCAAAATCCACAAGAGAAGATCTTTGGGTTTGTGGAACAAAAATGGAAGAAGAAGATTTTGAGCAGCAAAAGCAGCAACTTGAAAAGGTGAGTGGCAATGATGTAATTTTATATGTTGGAAGCACAAGGAAGAGATATGCAATAAGTTCTAAGTATTTGAGCCATCCTTTGCTAAATGCTCTTATTGACAAATCCAAGTCTAAGAAATTATTAGCTAATGATGATGATGAAGAAGAAGATTGTATTTCTGTCAGATGTGAAGTTGTTCTATTCGATCATCTCTTGTGGATGTTGGAAAATTCTGATCCAAATATTAGTTTCGATTCTAATTTGGAGGAATTGGCTGAGCTTTATGTTTTTTGA

Protein sequence

MKKINYLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCGTKMEEEDFEQQKQQLEKVSGNDVILYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLANDDDEEEDCISVRCEVVLFDHLLWMLENSDPNISFDSNLEELAELYVF

Homology

[Close]

BLAST of Bhi09G003017 vs. TAIR 10
Match: AT3G12955.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.1 bits (266), Expect = 1.3e-23
Identity = 68/146 (46.58%), Postives = 91/146 (62.33%), Query Frame = 0


Query: 3   KINYLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCGTKMEEEDFEQQKQQLEKVSGND 62
           ++  +LR+CKS+S QLGRS SY+SLRSKS R D          +D  Q   Q    S   
Sbjct: 6   RLMMMLRRCKSVSTQLGRSYSYTSLRSKSARRD---------PQDHLQDVDQSPTPSMYQ 65

Query: 63  VILYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLANDDDEEEDC-ISVRCEVVLFDH 122
            +L VG T+K Y IS K+L HPLLNAL++K +  +    DD+E+  C I+V+CEVVLFDH
Sbjct: 66  TVL-VGRTKKPYLISKKHLKHPLLNALVEKQQRYE---EDDNEDGSCIITVKCEVVLFDH 125

Query: 123 LLWMLENSDPNISFDSNLEELAELYV 148
           LLWMLE  D  +    +L++ A LY+
Sbjct: 126 LLWMLEYGD-EVHILESLDDFAHLYL 137

[Close]

BLAST of Bhi09G003017 vs. TAIR 10
Match: AT1G72430.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 69.7 bits (169), Expect = 2.2e-12
Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 64  ILYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLANDDDEEEDCISVRCEVVLFDHLL 123
           ++YVG TR+ Y +    +SHPL   L+D+S S+ +      E++  I V CEVVLF+HLL
Sbjct: 45  VVYVGQTRRPYMLRPDIISHPLFQELVDRSSSRSI------EQDREIVVACEVVLFEHLL 104

Query: 124 WMLENSDPNISFDSNLEELAELYVF 149
           WML++         ++EELAE Y +
Sbjct: 105 WMLKSGQEG----GSVEELAEFYTY 119

[Close]

BLAST of Bhi09G003017 vs. TAIR 10
Match: AT1G17345.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 68.9 bits (167), Expect = 3.8e-12
Identity = 35/90 (38.89%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 64  ILYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLANDDDEEEDCISVRCEVVLFDHLL 123
           ++YVG +R+ Y +SS  ++HPL   L+D+S        ++  +++ + V CEVVLF+HLL
Sbjct: 46  VVYVGKSRRPYMLSSHVIAHPLFQELLDRSSR----FIEERHDQETVLVACEVVLFEHLL 105

Query: 124 WMLENS-----DPNISFDSNLEELAELYVF 149
           WML+NS     D +     ++EELAE Y +
Sbjct: 106 WMLKNSSSDHGDEDDRERGSVEELAEFYTY 131

[Close]

BLAST of Bhi09G003017 vs. TAIR 10
Match: AT5G20820.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 68.2 bits (165), Expect = 6.5e-12
Identity = 37/82 (45.12%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 65  LYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLANDDDEEEDCISVRCEVVLFDHLLW 124
           +YVG TR+ Y +SS  +SHPL   L         +      E+  ISV CEVVLF+HLLW
Sbjct: 51  VYVGRTRRTYHVSSDVVSHPLFQQL-------AAVDGGCGSEDGSISVSCEVVLFEHLLW 110

Query: 125 MLENSDPNISFDSNLEELAELY 147
           MLEN+D + S   ++ EL E Y
Sbjct: 111 MLENADADESRPESVYELVEFY 125

[Close]

BLAST of Bhi09G003017 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 43.1 bits (100), Expect = 2.2e-04
Identity = 25/94 (26.60%), Postives = 49/94 (52.13%), Query Frame = 0


Query: 45  EEDFEQQKQQLEKVSGNDVILYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLANDDD 104
           +E+  Q  +    V   ++ +YVG   +R+ I + YLSH L   L++K++ +        
Sbjct: 66  DEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEE-----FGF 125

Query: 105 EEEDCISVRCEVVLFDHLLWMLENSDPNISFDSN 139
           ++   +++ CEV  F +LL  +EN+  ++  D N
Sbjct: 126 DQSGALTIPCEVETFKYLLKCMENNLKDLHPDDN 154

[Close]

BLAST of Bhi09G003017 vs. ExPASy Swiss-Prot
Match: Q9C9E1 (Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.1e-11
Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 64  ILYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLANDDDEEEDCISVRCEVVLFDHLL 123
           ++YVG TR+ Y +    +SHPL   L+D+S S+ +      E++  I V CEVVLF+HLL
Sbjct: 45  VVYVGQTRRPYMLRPDIISHPLFQELVDRSSSRSI------EQDREIVVACEVVLFEHLL 104

Query: 124 WMLENSDPNISFDSNLEELAELYVF 149
           WML++         ++EELAE Y +
Sbjct: 105 WMLKSGQEG----GSVEELAEFYTY 119

[Close]

BLAST of Bhi09G003017 vs. ExPASy Swiss-Prot
Match: Q9LQI6 (Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.3e-11
Identity = 35/90 (38.89%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 64  ILYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLANDDDEEEDCISVRCEVVLFDHLL 123
           ++YVG +R+ Y +SS  ++HPL   L+D+S        ++  +++ + V CEVVLF+HLL
Sbjct: 46  VVYVGKSRRPYMLSSHVIAHPLFQELLDRSSR----FIEERHDQETVLVACEVVLFEHLL 105

Query: 124 WMLENS-----DPNISFDSNLEELAELYVF 149
           WML+NS     D +     ++EELAE Y +
Sbjct: 106 WMLKNSSSDHGDEDDRERGSVEELAEFYTY 131

[Close]

BLAST of Bhi09G003017 vs. ExPASy Swiss-Prot
Match: Q29PU2 (Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.1e-11
Identity = 37/82 (45.12%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 65  LYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLANDDDEEEDCISVRCEVVLFDHLLW 124
           +YVG TR+ Y +SS  +SHPL   L         +      E+  ISV CEVVLF+HLLW
Sbjct: 51  VYVGRTRRTYHVSSDVVSHPLFQQL-------AAVDGGCGSEDGSISVSCEVVLFEHLLW 110

Query: 125 MLENSDPNISFDSNLEELAELY 147
           MLEN+D + S   ++ EL E Y
Sbjct: 111 MLENADADESRPESVYELVEFY 125

[Close]

BLAST of Bhi09G003017 vs. ExPASy TrEMBL
Match: A0A1S3B9J9 (uncharacterized protein LOC103487659 OS=Cucumis melo OX=3656 GN=LOC103487659 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.5e-56
Identity = 126/157 (80.25%), Postives = 136/157 (86.62%), Query Frame = 0


Query: 1   MKKINYLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCGTKMEEEDFEQQKQQLEKVSG 60
           MKKIN LLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC  + +EEDFEQQ  Q  KVSG
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC--EKQEEDFEQQFDQ--KVSG 60

Query: 61  -NDVILYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLANDDDE--------EEDCIS 120
            N+V+LYVGSTRK+YAI+SKYL HPLLNALIDKSKSKKL+ + DDE        +EDCI 
Sbjct: 61  NNNVVLYVGSTRKKYAINSKYLGHPLLNALIDKSKSKKLVDDHDDEHEEHDDGDDEDCIL 120

Query: 121 VRCEVVLFDHLLWMLENSDPNISFDSNLEELAELYVF 149
           VRCEVVLFDHLLWMLENSDPNI+FDSNLEELAELYVF
Sbjct: 121 VRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 153

[Close]

BLAST of Bhi09G003017 vs. ExPASy TrEMBL
Match: A0A6J1C0S4 (uncharacterized protein LOC111007398 OS=Momordica charantia OX=3673 GN=LOC111007398 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.7e-55
Identity = 121/152 (79.61%), Postives = 135/152 (88.82%), Query Frame = 0


Query: 1   MKKINYLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VCGTKMEEEDFEQ---QKQQLE 60
           MKKIN LLRKCKSLSRQLGRSSSYSSLRSKSTREDLW +CGTKMEEE+ E+   Q+QQLE
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDHQQQQLE 60

Query: 61  KVSGNDVILYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLANDDDEEEDCISVRCEV 120
           KV G++VI+YVGSTRK+Y ISSK+LSHPL+NALIDKSKSK    ++D E    ISVRCEV
Sbjct: 61  KVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCE---AISVRCEV 120

Query: 121 VLFDHLLWMLENSDPNISFDSNLEELAELYVF 149
           VLFDHLLWMLENSDPNI+FDSNLEELA+LYVF
Sbjct: 121 VLFDHLLWMLENSDPNITFDSNLEELADLYVF 149

[Close]

BLAST of Bhi09G003017 vs. ExPASy TrEMBL
Match: B9RI47 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1576420 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 6.3e-39
Identity = 99/148 (66.89%), Postives = 111/148 (75.00%), Query Frame = 0


Query: 1   MKKINYLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCGTKMEEEDFEQQKQQLEKVSG 60
           MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTRE+LW      +EED E Q         
Sbjct: 1   MKKINLILRKCKSLSRQLGRSSSYSSLRSKSTREELW---GDHKEEDEEHQS-------- 60

Query: 61  NDVILYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLANDDDEEEDCISVRCEVVLFD 120
               L+VGSTRKRY ISSKYLSHPL+NALI KSK +        + E+ + V+CEVVLFD
Sbjct: 61  ---TLFVGSTRKRYVISSKYLSHPLVNALIQKSKQR--------QGEEILVVKCEVVLFD 120

Query: 121 HLLWMLENSDPNISFDSNLEELAELYVF 149
           HLLWMLEN+DPN+SFDS LEELAELYVF
Sbjct: 121 HLLWMLENADPNLSFDS-LEELAELYVF 125

[Close]

BLAST of Bhi09G003017 vs. ExPASy TrEMBL
Match: A0A6J5USU2 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS26472 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 5.3e-38
Identity = 100/150 (66.67%), Postives = 109/150 (72.67%), Query Frame = 0


Query: 1   MKKINYLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWV-CGTKMEEEDFEQQKQQLEKVS 60
           MKKIN+LLRKCKSLSRQLGRSSSYSSLRSKSTREDLWV  G KM E D   Q        
Sbjct: 1   MKKINFLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVGHGDKMHEIDHHHQ-------- 60

Query: 61  GNDVILYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLANDDDEEEDCISVRCEVVLF 120
               I++VGSTRKRY ISSKYL+HPLLNALIDKS  +K       E ED I V CEVVLF
Sbjct: 61  ---TIIFVGSTRKRYVISSKYLNHPLLNALIDKSSKQK----QGGEAED-ILVNCEVVLF 120

Query: 121 DHLLWMLEN-SDPNISFDSNLEELAELYVF 149
           DHL+WMLEN +DP+     +LEELA LYVF
Sbjct: 121 DHLIWMLENAADPSFGASESLEELAALYVF 134

[Close]

BLAST of Bhi09G003017 vs. ExPASy TrEMBL
Match: A0A2P5DV80 (Small auxin-up RNA OS=Parasponia andersonii OX=3476 GN=PanWU01x14_028090 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 9.1e-38
Identity = 94/148 (63.51%), Postives = 107/148 (72.30%), Query Frame = 0


Query: 1   MKKINYLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCGTKMEEEDFEQQKQQLEKVSG 60
           MKKIN LLRKCKSLSRQLGRSSSYS+LRSKSTRED W+     ++ D +Q   QL K S 
Sbjct: 1   MKKINLLLRKCKSLSRQLGRSSSYSNLRSKSTREDFWI----PDQHDHDQDDPQLHKNSI 60

Query: 61  NDVILYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLANDDDEEEDCISVRCEVVLFD 120
               ++VGSTRKRY IS+KYLSHPLL ALIDKSK     A  D   +  + V+CEVVLFD
Sbjct: 61  TTSTIFVGSTRKRYVISTKYLSHPLLAALIDKSKQNNKAAGADG--DGVLVVKCEVVLFD 120

Query: 121 HLLWMLENSDPNISFDSNLEELAELYVF 149
           HLLWMLEN+DP      +LEELA LYVF
Sbjct: 121 HLLWMLENADPVSLGSESLEELAALYVF 142

The following BLAST results are available for this feature:

BLAST of Bhi09G003017 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12955.1	1.3e-23	46.58	SAUR-like auxin-responsive protein family	[more]
AT1G72430.1	2.2e-12	41.18	SAUR-like auxin-responsive protein family	[more]
AT1G17345.1	3.8e-12	38.89	SAUR-like auxin-responsive protein family	[more]
AT5G20820.1	6.5e-12	45.12	SAUR-like auxin-responsive protein family	[more]
AT5G20810.1	2.2e-04	26.60	SAUR-like auxin-responsive protein family	[more]

BLAST of Bhi09G003017 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9E1	3.1e-11	41.18	Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 S...	[more]
Q9LQI6	5.3e-11	38.89	Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 S...	[more]
Q29PU2	9.1e-11	45.12	Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 S...	[more]

BLAST of Bhi09G003017 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9J9	2.5e-56	80.25	uncharacterized protein LOC103487659 OS=Cucumis melo OX=3656 GN=LOC103487659 PE=...	[more]
A0A6J1C0S4	3.7e-55	79.61	uncharacterized protein LOC111007398 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
B9RI47	6.3e-39	66.89	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1576420 PE=3 SV=1	[more]
A0A6J5USU2	5.3e-38	66.67	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS26472 PE=3 S...	[more]
A0A2P5DV80	9.1e-38	63.51	Small auxin-up RNA OS=Parasponia andersonii OX=3476 GN=PanWU01x14_028090 PE=3 SV...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 31..126 e-value: 7.2E-14 score: 51.7
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 3..148
None	No IPR available	PANTHER	PTHR31374:SF195	EXPRESSED PROTEIN	coord: 3..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M003017	Bhi09M003017	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0016020	membrane