Bhi09G002350 (gene) Wax gourd (B227) v1

Overview
NameBhi09G002350
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionAt4g19430
Locationchr9: 74862898 .. 74863678 (+)
RNA-Seq ExpressionBhi09G002350
SyntenyBhi09G002350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTTCTCTAAGCCTTGTCTTCCATTCATCTATTAATGTCTATTTCCACCCAACTTCTAGGGCTTGGAGGGCTTGAGAAGAAAGGAAAAAAGAGCCTGAAGAGAGAGAGTTTAAAGAGAGAAAGCAATGGCCATTGTGCATACAAGGAAGTGAGTGACAGTGAGAAGCTTGGAGATGGCAAGGGAAGAAGAAGAAGAAGAAGAAGGAGTAGAAGAAGAAAGAAAGGTCAGTTTGGGAATAATGCAAGAGAAGTACTTCACTTGAATTTGTGGTATTTTACTTCAACAATCAGCCATATATTAAGGAAGGCTAAAGCCTTTTACAATGAATGTTGCTGTGATGCCTATGAAGATGAGAGAATGAAGAAGATTGAAGTGATTTCTGTTGATGCTTATTTCTCAATGCCTGTTTTGCCTTATACTACTACTATGCCTAATTATTGTATGTAAAATGTGATATTAAAGGCATAAGAATGAGTGATGGAACTAGTATCATGTGTGTTTCTAATTCTACCAACTTAAATGTATGTGTCTAGGCTTAGAATAATATTTTGGGTCCACTTTGGAACTCTTTTGAAAACCAAACGAAAAAAAATAAGTCTTTTTCCTTTTGTTTTCAACATTGTTTGTAAAAAGTATGATTGGGTGGCTAGTAAGAAGTAAACATTATTGTGCACTAGAACTTTTTGTTTATAAGCTTGTGATGTTGAGATCTCGTTTGATAATCCTTTGATTTTTTTTTTTAAAGATTAAGTTTATAGATATTACTTACACCTCCAAA

mRNA sequence

CTTCTTCTCTAAGCCTTGTCTTCCATTCATCTATTAATGTCTATTTCCACCCAACTTCTAGGGCTTGGAGGGCTTGAGAAGAAAGGAAAAAAGAGCCTGAAGAGAGAGAGTTTAAAGAGAGAAAGCAATGGCCATTGTGCATACAAGGAAGTGAGTGACAGTGAGAAGCTTGGAGATGGCAAGGGAAGAAGAAGAAGAAGAAGAAGGAGTAGAAGAAGAAAGAAAGGTCAGTTTGGGAATAATGCAAGAGAAGTACTTCACTTGAATTTGTGGTATTTTACTTCAACAATCAGCCATATATTAAGGAAGGCTAAAGCCTTTTACAATGAATGTTGCTGTGATGCCTATGAAGATGAGAGAATGAAGAAGATTGAAGTGATTTCTGTTGATGCTTATTTCTCAATGCCTGTTTTGCCTTATACTACTACTATGCCTAATTATTGTATGTAAAATGTGATATTAAAGGCATAAGAATGAGTGATGGAACTAGTATCATGTGTGTTTCTAATTCTACCAACTTAAATGTATGTGTCTAGGCTTAGAATAATATTTTGGGTCCACTTTGGAACTCTTTTGAAAACCAAACGAAAAAAAATAAGTCTTTTTCCTTTTGTTTTCAACATTGTTTGTAAAAAGTATGATTGGGTGGCTAGTAAGAAGTAAACATTATTGTGCACTAGAACTTTTTGTTTATAAGCTTGTGATGTTGAGATCTCGTTTGATAATCCTTTGATTTTTTTTTTTAAAGATTAAGTTTATAGATATTACTTACACCTCCAAA

Coding sequence (CDS)

ATGTCTATTTCCACCCAACTTCTAGGGCTTGGAGGGCTTGAGAAGAAAGGAAAAAAGAGCCTGAAGAGAGAGAGTTTAAAGAGAGAAAGCAATGGCCATTGTGCATACAAGGAAGTGAGTGACAGTGAGAAGCTTGGAGATGGCAAGGGAAGAAGAAGAAGAAGAAGAAGGAGTAGAAGAAGAAAGAAAGGTCAGTTTGGGAATAATGCAAGAGAAGTACTTCACTTGAATTTGTGGTATTTTACTTCAACAATCAGCCATATATTAAGGAAGGCTAAAGCCTTTTACAATGAATGTTGCTGTGATGCCTATGAAGATGAGAGAATGAAGAAGATTGAAGTGATTTCTGTTGATGCTTATTTCTCAATGCCTGTTTTGCCTTATACTACTACTATGCCTAATTATTGTATGTAA

Protein sequence

MSISTQLLGLGGLEKKGKKSLKRESLKRESNGHCAYKEVSDSEKLGDGKGRRRRRRRSRRRKKGQFGNNAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVISVDAYFSMPVLPYTTTMPNYCM
Homology
BLAST of Bhi09G002350 vs. TAIR 10
Match: AT4G19430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 4.3e-10
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 0

Query: 65  QFGNNAREVLHLN-LWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVISVDAYFSM 124
           ++G+  R+V  L+ LWY   +ISHILRKA+AFYNE CCD Y +     +    V+ YFS+
Sbjct: 101 KYGDLRRDVARLSLLWYMKCSISHILRKARAFYNEFCCDTYAESNTMAV----VEPYFSI 159

Query: 125 PVL 127
           PV+
Sbjct: 161 PVI 159

BLAST of Bhi09G002350 vs. ExPASy TrEMBL
Match: A0A0A0L609 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G669230 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.4e-46
Identity = 100/130 (76.92%), Postives = 114/130 (87.69%), Query Frame = 0

Query: 1   MSISTQLLGLGGLEKKGKKSLKRESLKRESNGHCAYKEVSDSEKLGDGKGRRRRRRRSRR 60
           MS+STQLL LG LEKKGKK +KRESLKRE+NG+ +YK+VSD+E+ G+ KGRRRR    +R
Sbjct: 1   MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRR----KR 60

Query: 61  RKKGQFGNNAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVISVDAY 120
           RKKGQFG   R+VLH+N WYFTSTISHILRKAKAFYNECCCDA+EDERMKK EVIS+D Y
Sbjct: 61  RKKGQFG-TTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPY 120

Query: 121 FSMPVLPYTT 131
           FSMPVLPYTT
Sbjct: 121 FSMPVLPYTT 125

BLAST of Bhi09G002350 vs. ExPASy TrEMBL
Match: A0A5A7UDK1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G001040 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 3.3e-42
Identity = 97/130 (74.62%), Postives = 108/130 (83.08%), Query Frame = 0

Query: 1   MSISTQLLGLGGLEKKGKKSLKRESLKRESNGHCAYKEVSDSEKLGDGKGRRRRRRRSRR 60
           MS+STQLLGLG LEKKG+K +KRES KRE NG+ +YKEVSD+ + GD KGRRRR    RR
Sbjct: 1   MSLSTQLLGLGRLEKKGRKKIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRR----RR 60

Query: 61  RKKGQFGNNAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVISVDAY 120
           RKKGQFG   R+VLH+N WYFTSTISHILRKAKAFYNECCCDAYEDERM +    S+D Y
Sbjct: 61  RKKGQFG-TTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQ----SIDPY 120

Query: 121 FSMPVLPYTT 131
           FSMPVLPYTT
Sbjct: 121 FSMPVLPYTT 121

BLAST of Bhi09G002350 vs. ExPASy TrEMBL
Match: A0A5D3BSQ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00900 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.3e-42
Identity = 97/130 (74.62%), Postives = 108/130 (83.08%), Query Frame = 0

Query: 1   MSISTQLLGLGGLEKKGKKSLKRESLKRESNGHCAYKEVSDSEKLGDGKGRRRRRRRSRR 60
           MS+STQLLGLG LEKKG+K +KRES KRE NG+ +YKEVSD+ + GD KGRRRR    RR
Sbjct: 1   MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRR----RR 60

Query: 61  RKKGQFGNNAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVISVDAY 120
           RKKGQFG   R+VLH+N WYFTSTISHILRKAKAFYNECCCDAYEDERM +    S+D Y
Sbjct: 61  RKKGQFG-TTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQ----SIDPY 120

Query: 121 FSMPVLPYTT 131
           FSMPVLPYTT
Sbjct: 121 FSMPVLPYTT 121

BLAST of Bhi09G002350 vs. ExPASy TrEMBL
Match: A0A6J1FKP2 (uncharacterized protein LOC111446301 OS=Cucurbita moschata OX=3662 GN=LOC111446301 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.3e-35
Identity = 86/132 (65.15%), Postives = 103/132 (78.03%), Query Frame = 0

Query: 1   MSISTQLLGLGGLEKKGKKSLKRESLKRESNGHCAYKEVS--DSEKLGDGKGRRRRRRRS 60
           MS+S Q+LGL  L+KK KK  +RE L+RE  GH +  +    +SE+ GDGKGRRR +++ 
Sbjct: 1   MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQG 60

Query: 61  RRRKKGQFGNNAREVLHLNLWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVISVD 120
           RRRK  QFG  AR+VL  N+WYFTSTIS+ILRKAKAFYNECCCDAYEDERMK++EV  VD
Sbjct: 61  RRRKTTQFG-AARQVLQWNMWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVD 120

Query: 121 AYFSMPVLPYTT 131
            YFSMPV PYTT
Sbjct: 121 PYFSMPVFPYTT 131

BLAST of Bhi09G002350 vs. ExPASy TrEMBL
Match: A0A1Q3D8H6 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_32173 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 8.8e-11
Identity = 47/111 (42.34%), Postives = 65/111 (58.56%), Query Frame = 0

Query: 23  RESLKRESNGHCAYKEVSDSEKLGDGKGRRRRRRRSRRRKKGQFGNNAREVLHLNLWYFT 82
           R ++K ES     + E    E +G+       +   R++K G +   A +   L +WY T
Sbjct: 20  RRNIKLES-----HLEEEHEENMGE-------KYMPRKKKPGHW---ALQFPRLGIWYMT 79

Query: 83  STISHILRKAKAFYNECCCDAYEDERMKKIEVISVDAYFSMPVLPYTTTMP 134
           S+IS+ILRKAKAFYNECCCDA+ED  +   +V  VD+YFS PV+P  T  P
Sbjct: 80  SSISYILRKAKAFYNECCCDAFEDPVLMGKQVTLVDSYFSTPVVPPPTISP 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT4G19430.14.3e-1047.62unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L6096.4e-4676.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G669230 PE=4 SV=1[more]
A0A5A7UDK13.3e-4274.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BSQ84.3e-4274.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1FKP22.3e-3565.15uncharacterized protein LOC111446301 OS=Cucurbita moschata OX=3662 GN=LOC1114463... [more]
A0A1Q3D8H68.8e-1142.34Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M002350Bhi09M002350mRNA