Bhi09G002296 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G002296
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr9: 73287934 .. 73288551 (-)
RNA-Seq Expression	Bhi09G002296
Synteny	Bhi09G002296

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCTTCAAACAAAAGCTGAAGCTGAAAGTTTATCTCATATTTGGCATCAACGATATGGACATTTGAGTTACAAAGATTTGAGAACTCTACAGTGCAAAAACATGGTATATGGGCTTCCTCAATTTAGTGCCTCAAATGCTACATGCACTGATTGTATCAAAGGGAAACAACATCGAGATCCCTTTCCAAAAAGGAGCACTTGGAGAGCAACACAAAAGCTAGAACTTATTCATGCAGATATTTGTGGCCCAATCACCCCTACATCTAATAGCAACAAAAGGTACATTCTGTTGTTTATTGATGATTATAGCAGAAAAGCATGGGTATATTTTTTGGTAGAAAAGTCAGAATCTTTTAACTATTTCAAATACTTTAAGTCCTTGGTTGAGAAAGAAGTTGAGTTGCCTATTAAGTGTTTACGCACCGATAGAGGAGGAGAATTTAATTCAGTTGAGTTCAATGATTTTTGCAAACAAAATGGGATCAAAAGGCAATTAACGACCATCTATACTCCGCAACAGAATGGTGTAGCGGAAAGGAAAAACAGAACGATAATGAACTTGGTTCGTTCAATGCTATCGGAGAAAAATATACCCAAAACCTTTTGGTCGGAAGCA

mRNA sequence

TGCCTTCAAACAAAAGCTGAAGCTGAAAGTTTATCTCATATTTGGCATCAACGATATGGACATTTGAGTTACAAAGATTTGAGAACTCTACAGTGCAAAAACATGGTATATGGGCTTCCTCAATTTAGTGCCTCAAATGCTACATGCACTGATTGTATCAAAGGGAAACAACATCGAGATCCCTTTCCAAAAAGGAGCACTTGGAGAGCAACACAAAAGCTAGAACTTATTCATGCAGATATTTGTGGCCCAATCACCCCTACATCTAATAGCAACAAAAGGTACATTCTGTTGTTTATTGATGATTATAGCAGAAAAGCATGGGTATATTTTTTGGTAGAAAAGTCAGAATCTTTTAACTATTTCAAATACTTTAAGTCCTTGGTTGAGAAAGAAGTTGAGTTGCCTATTAAGTGTTTACGCACCGATAGAGGAGGAGAATTTAATTCAGTTGAGTTCAATGATTTTTGCAAACAAAATGGGATCAAAAGGCAATTAACGACCATCTATACTCCGCAACAGAATGGTGTAGCGGAAAGGAAAAACAGAACGATAATGAACTTGGTTCGTTCAATGCTATCGGAGAAAAATATACCCAAAACCTTTTGGTCGGAAGCA

Coding sequence (CDS)

TGCCTTCAAACAAAAGCTGAAGCTGAAAGTTTATCTCATATTTGGCATCAACGATATGGACATTTGAGTTACAAAGATTTGAGAACTCTACAGTGCAAAAACATGGTATATGGGCTTCCTCAATTTAGTGCCTCAAATGCTACATGCACTGATTGTATCAAAGGGAAACAACATCGAGATCCCTTTCCAAAAAGGAGCACTTGGAGAGCAACACAAAAGCTAGAACTTATTCATGCAGATATTTGTGGCCCAATCACCCCTACATCTAATAGCAACAAAAGGTACATTCTGTTGTTTATTGATGATTATAGCAGAAAAGCATGGGTATATTTTTTGGTAGAAAAGTCAGAATCTTTTAACTATTTCAAATACTTTAAGTCCTTGGTTGAGAAAGAAGTTGAGTTGCCTATTAAGTGTTTACGCACCGATAGAGGAGGAGAATTTAATTCAGTTGAGTTCAATGATTTTTGCAAACAAAATGGGATCAAAAGGCAATTAACGACCATCTATACTCCGCAACAGAATGGTGTAGCGGAAAGGAAAAACAGAACGATAATGAACTTGGTTCGTTCAATGCTATCGGAGAAAAATATACCCAAAACCTTTTGGTCGGAAGCA

Protein sequence

CLQTKAEAESLSHIWHQRYGHLSYKDLRTLQCKNMVYGLPQFSASNATCTDCIKGKQHRDPFPKRSTWRATQKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSESFNYFKYFKSLVEKEVELPIKCLRTDRGGEFNSVEFNDFCKQNGIKRQLTTIYTPQQNGVAERKNRTIMNLVRSMLSEKNIPKTFWSEA

Homology

[Close]

BLAST of Bhi09G002296 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.4e-41
Identity = 87/201 (43.28%), Postives = 122/201 (60.70%), Query Frame = 0


Query: 6   AEAESLSHIWHQRYGHLSYKDLRTLQCKNMVYGLPQFSASNATCTDCIKGKQHRDPFPKR 65
           A+ E    +WH+R GH+S K L+ L  K+++        +   C  C+ GKQHR  F + 
Sbjct: 416 AQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAK--GTTVKPCDYCLFGKQHRVSF-QT 475

Query: 66  STWRATQKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSESFNYFKYF 125
           S+ R    L+L+++D+CGP+   S    +Y + FIDD SRK WVY L  K + F  F+ F
Sbjct: 476 SSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKF 535

Query: 126 KSLVEKEVELPIKCLRTDRGGEFNSVEFNDFCKQNGIKRQLTTIYTPQQNGVAERKNRTI 185
            +LVE+E    +K LR+D GGE+ S EF ++C  +GI+ + T   TPQ NGVAER NRTI
Sbjct: 536 HALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTI 595

Query: 186 MNLVRSMLSEKNIPKTFWSEA 207
           +  VRSML    +PK+FW EA
Sbjct: 596 VEKVRSMLRMAKLPKSFWGEA 613

[Close]

BLAST of Bhi09G002296 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 138.7 bits (348), Expect = 7.6e-32
Identity = 72/197 (36.55%), Postives = 107/197 (54.31%), Query Frame = 0


Query: 14  IWHQRYGHLSYKDLRTLQCKNMVYG---LPQFSASNATCTDCIKGKQHRDPFPK-RSTWR 73
           +WH+R+GH+S   L  ++ KNM      L     S   C  C+ GKQ R PF + +    
Sbjct: 417 LWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTH 476

Query: 74  ATQKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSESFNYFKYFKSLV 133
             + L ++H+D+CGPITP +  +K Y ++F+D ++     Y +  KS+ F+ F+ F +  
Sbjct: 477 IKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKS 536

Query: 134 EKEVELPIKCLRTDRGGEFNSVEFNDFCKQNGIKRQLTTIYTPQQNGVAERKNRTIMNLV 193
           E    L +  L  D G E+ S E   FC + GI   LT  +TPQ NGV+ER  RTI    
Sbjct: 537 EAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKA 596

Query: 194 RSMLSEKNIPKTFWSEA 207
           R+M+S   + K+FW EA
Sbjct: 597 RTMVSGAKLDKSFWGEA 613

[Close]

BLAST of Bhi09G002296 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.3e-27
Identity = 72/195 (36.92%), Postives = 112/195 (57.44%), Query Frame = 0


Query: 15  WHQRYGHLSYKDLRTLQCKNMVYGLPQFSASN--ATCTDCIKGKQHRDPFPKRSTWRATQ 74
           WH R GH S   L ++      + LP  + S+   +C+DC   K H+ PF   ST  +++
Sbjct: 446 WHSRLGHPSLAILNSVISN---HSLPVLNPSHKLLSCSDCFINKSHKVPF-SNSTITSSK 505

Query: 75  KLELIHADI-CGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSESFNYFKYFKSLVEK 134
            LE I++D+   PI   S  N RY ++F+D ++R  W+Y L +KS+  + F  FKSLVE 
Sbjct: 506 PLEYIYSDVWSSPI--LSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVEN 565

Query: 135 EVELPIKCLRTDRGGEFNSVEFNDFCKQNGIKRQLTTIYTPQQNGVAERKNRTIMNLVRS 194
             +  I  L +D GGEF  V   D+  Q+GI    +  +TP+ NG++ERK+R I+ +  +
Sbjct: 566 RFQTRIGTLYSDNGGEF--VVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLT 625

Query: 195 MLSEKNIPKTFWSEA 207
           +LS  ++PKT+W  A
Sbjct: 626 LLSHASVPKTYWPYA 632

[Close]

BLAST of Bhi09G002296 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.6e-24
Identity = 67/193 (34.72%), Postives = 109/193 (56.48%), Query Frame = 0


Query: 15  WHQRYGHLSYKDLRTLQCKNMVYGLPQFSASNATCTDCIKGKQHRDPFPKRSTWRATQKL 74
           WH R GH +   L ++   N    +   S    +C+DC+  K ++ PF  +ST  +T+ L
Sbjct: 467 WHARLGHPAPSILNSV-ISNYSLSVLNPSHKFLSCSDCLINKSNKVPF-SQSTINSTRPL 526

Query: 75  ELIHADI-CGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSESFNYFKYFKSLVEKEV 134
           E I++D+   PI   S+ N RY ++F+D ++R  W+Y L +KS+    F  FK+L+E   
Sbjct: 527 EYIYSDVWSSPI--LSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRF 586

Query: 135 ELPIKCLRTDRGGEFNSVEFNDFCKQNGIKRQLTTIYTPQQNGVAERKNRTIMNLVRSML 194
           +  I    +D GGEF  V   ++  Q+GI    +  +TP+ NG++ERK+R I+    ++L
Sbjct: 587 QTRIGTFYSDNGGEF--VALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLL 646

Query: 195 SEKNIPKTFWSEA 207
           S  +IPKT+W  A
Sbjct: 647 SHASIPKTYWPYA 653

[Close]

BLAST of Bhi09G002296 vs. ExPASy Swiss-Prot
Match: Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.8e-18
Identity = 57/201 (28.36%), Postives = 96/201 (47.76%), Query Frame = 0


Query: 16  HQRYGHLSYKDLRTLQCKNMVYGLPQ-----FSASNATCTDCIKGK--QHRDPFPKRSTW 75
           H+  GH +++ ++    KN V  L +      +AS   C DC+ GK  +HR     R  +
Sbjct: 595 HRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKY 654

Query: 76  RAT-QKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSES--FNYFKYF 135
           + + +  + +H DI GP+     S   Y + F D+ +R  WVY L ++ E    N F   
Sbjct: 655 QESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSI 714

Query: 136 KSLVEKEVELPIKCLRTDRGGEFNSVEFNDFCKQNGIKRQLTTIYTPQQNGVAERKNRTI 195
            + ++ +    +  ++ DRG E+ +   + F    GI    TT    + +GVAER NRT+
Sbjct: 715 LAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTL 774

Query: 196 MNLVRSMLSEKNIPKTFWSEA 207
           +N  R++L    +P   W  A
Sbjct: 775 LNDCRTLLHCSGLPNHLWFSA 795

[Close]

BLAST of Bhi09G002296 vs. ExPASy TrEMBL
Match: A0A2N9H9R9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39009 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 5.0e-95
Identity = 168/206 (81.55%), Postives = 183/206 (88.83%), Query Frame = 0


Query: 1   CLQTKAEAESLSHIWHQRYGHLSYKDLRTLQCKNMVYGLPQFSASNATCTDCIKGKQHRD 60
           C  T+   ++LSH+WH+RYGHLSYK LRTL  KNMV GLPQ SAS+ TCTDCI GKQHRD
Sbjct: 418 CFHTR--TQNLSHLWHRRYGHLSYKGLRTLLYKNMVRGLPQLSASSVTCTDCINGKQHRD 477

Query: 61  PFPKRSTWRATQKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSESFN 120
           P PK+STWRATQKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSE+ N
Sbjct: 478 PIPKKSTWRATQKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSEALN 537

Query: 121 YFKYFKSLVEKEVELPIKCLRTDRGGEFNSVEFNDFCKQNGIKRQLTTIYTPQQNGVAER 180
            FK FK++VEKE  L +KCLRTDRGGEFNS EFNDFCKQ+GIKRQLT  YTPQQNGVAER
Sbjct: 538 SFKCFKTMVEKETGLFVKCLRTDRGGEFNSNEFNDFCKQSGIKRQLTAAYTPQQNGVAER 597

Query: 181 KNRTIMNLVRSMLSEKNIPKTFWSEA 207
           KNRT+MN+VRSMLS+KNIPKTFW EA
Sbjct: 598 KNRTVMNMVRSMLSDKNIPKTFWPEA 621

[Close]

BLAST of Bhi09G002296 vs. ExPASy TrEMBL
Match: A0A4Y1QX25 (ADP glucose pyrophosphorylase large subunit 1 OS=Prunus dulcis OX=3755 GN=Prudu_005175 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.6e-95
Identity = 168/206 (81.55%), Postives = 182/206 (88.35%), Query Frame = 0


Query: 1   CLQTKAEAESLSHIWHQRYGHLSYKDLRTLQCKNMVYGLPQFSASNATCTDCIKGKQHRD 60
           C  T+   + L H+WH+RYGHLSYK LRTL  KNMV GLPQ SAS+ TCTDCI GKQHRD
Sbjct: 420 CFHTR--TQDLFHLWHRRYGHLSYKGLRTLLYKNMVRGLPQLSASSVTCTDCINGKQHRD 479

Query: 61  PFPKRSTWRATQKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSESFN 120
           P PK+STWRATQKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSE+FN
Sbjct: 480 PIPKKSTWRATQKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSEAFN 539

Query: 121 YFKYFKSLVEKEVELPIKCLRTDRGGEFNSVEFNDFCKQNGIKRQLTTIYTPQQNGVAER 180
            FK FK++VEKE  L +KCLRTDRGGEFNS EFNDFCKQ+GIKRQLTT YTPQQNGVAER
Sbjct: 540 SFKCFKTMVEKETGLFVKCLRTDRGGEFNSNEFNDFCKQSGIKRQLTTAYTPQQNGVAER 599

Query: 181 KNRTIMNLVRSMLSEKNIPKTFWSEA 207
           KNRT+MN+VRSMLS+KNIPK FW EA
Sbjct: 600 KNRTVMNMVRSMLSDKNIPKNFWPEA 623

[Close]

BLAST of Bhi09G002296 vs. ExPASy TrEMBL
Match: A0A2N9GWV7 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31696 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 9.5e-94
Identity = 166/205 (80.98%), Postives = 181/205 (88.29%), Query Frame = 0


Query: 1   CLQTKAEAESLSHIWHQRYGHLSYKDLRTLQCKNMVYGLPQFSASNATCTDCIKGKQHRD 60
           C  T+   ++LSH+WH+RYGHLSYK LRTL  KNMV GLPQ SAS+ TCTDCI GKQHRD
Sbjct: 321 CFHTR--TQNLSHLWHRRYGHLSYKGLRTLLYKNMVRGLPQLSASSVTCTDCINGKQHRD 380

Query: 61  PFPKRSTWRATQKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSESFN 120
           P PK+STWRATQKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSE+ N
Sbjct: 381 PIPKKSTWRATQKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSEALN 440

Query: 121 YFKYFKSLVEKEVELPIKCLRTDRGGEFNSVEFNDFCKQNGIKRQLTTIYTPQQNGVAER 180
            FK FK++VEKE  L +KCLRTDRGGEFNS EFNDFCKQ+GIKRQLT  YTPQQNGVAER
Sbjct: 441 SFKCFKTMVEKETRLFVKCLRTDRGGEFNSNEFNDFCKQSGIKRQLTAAYTPQQNGVAER 500

Query: 181 KNRTIMNLVRSMLSEKNIPKTFWSE 206
           KNRT+MN+V SMLS+KNIPKTFW E
Sbjct: 501 KNRTVMNMVCSMLSDKNIPKTFWPE 523

[Close]

BLAST of Bhi09G002296 vs. ExPASy TrEMBL
Match: A0A2K3MZ63 (Retrotransposon-related protein OS=Trifolium pratense OX=57577 GN=L195_g019292 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.7e-93
Identity = 162/206 (78.64%), Postives = 182/206 (88.35%), Query Frame = 0


Query: 1   CLQTKAEAESLSHIWHQRYGHLSYKDLRTLQCKNMVYGLPQFSASNATCTDCIKGKQHRD 60
           C  TK  A+ LSH+WH+RYGHLSYK LRTL  KNMV GLPQFS S+  CT+CI GKQHRD
Sbjct: 418 CFHTK--AQDLSHLWHRRYGHLSYKGLRTLLYKNMVRGLPQFSISSVICTNCINGKQHRD 477

Query: 61  PFPKRSTWRATQKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSESFN 120
           P PK+S WRATQKLELIHAD+CGPI+P+SNSNKRYILLFIDDYSRK+WVYFLVEKSE+ N
Sbjct: 478 PIPKKSNWRATQKLELIHADVCGPISPSSNSNKRYILLFIDDYSRKSWVYFLVEKSEALN 537

Query: 121 YFKYFKSLVEKEVELPIKCLRTDRGGEFNSVEFNDFCKQNGIKRQLTTIYTPQQNGVAER 180
            FK FK++VEKE E+ IKCLRTDRGGEFNS EFNDFCKQ+G+KRQLTT YTPQQNGVAER
Sbjct: 538 SFKCFKTMVEKEAEMAIKCLRTDRGGEFNSNEFNDFCKQSGVKRQLTTAYTPQQNGVAER 597

Query: 181 KNRTIMNLVRSMLSEKNIPKTFWSEA 207
           KNRT+MN+VRS+L +KNIPKTFW EA
Sbjct: 598 KNRTVMNMVRSLLFDKNIPKTFWPEA 621

[Close]

BLAST of Bhi09G002296 vs. ExPASy TrEMBL
Match: A0A2N9J8J5 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60817 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.7e-93
Identity = 165/206 (80.10%), Postives = 181/206 (87.86%), Query Frame = 0


Query: 1   CLQTKAEAESLSHIWHQRYGHLSYKDLRTLQCKNMVYGLPQFSASNATCTDCIKGKQHRD 60
           C  T+   ++L H+WH+RYGHLSYK LRTL  KNMV GLPQ +AS+ TCTDCI GKQHRD
Sbjct: 312 CFHTR--TQNLFHLWHRRYGHLSYKGLRTLLYKNMVRGLPQLTASSVTCTDCINGKQHRD 371

Query: 61  PFPKRSTWRATQKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSESFN 120
           P PK+STWRATQKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSE+ N
Sbjct: 372 PIPKKSTWRATQKLELIHADICGPITPTSNSNKRYILLFIDDYSRKAWVYFLVEKSEALN 431

Query: 121 YFKYFKSLVEKEVELPIKCLRTDRGGEFNSVEFNDFCKQNGIKRQLTTIYTPQQNGVAER 180
            FK FK++VEKE  L +KC RTDRGGEFNS EFNDFCKQ+GIKRQLTT YTPQQN VAER
Sbjct: 432 SFKCFKTMVEKETGLFVKCFRTDRGGEFNSNEFNDFCKQSGIKRQLTTAYTPQQNDVAER 491

Query: 181 KNRTIMNLVRSMLSEKNIPKTFWSEA 207
           KNRT+MN+VRSMLS+KNIPKTFW EA
Sbjct: 492 KNRTMMNMVRSMLSDKNIPKTFWPEA 515

The following BLAST results are available for this feature:

BLAST of Bhi09G002296 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi09G002296 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.4e-41	43.28	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	7.6e-32	36.55	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	4.3e-27	36.92	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	2.6e-24	34.72	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q12491	4.8e-18	28.36	Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Bhi09G002296 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9H9R9	5.0e-95	81.55	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39009 PE=4 SV=1	[more]
A0A4Y1QX25	6.6e-95	81.55	ADP glucose pyrophosphorylase large subunit 1 OS=Prunus dulcis OX=3755 GN=Prudu_...	[more]
A0A2N9GWV7	9.5e-94	80.98	Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB...	[more]
A0A2K3MZ63	4.7e-93	78.64	Retrotransposon-related protein OS=Trifolium pratense OX=57577 GN=L195_g019292 P...	[more]
A0A2N9J8J5	4.7e-93	80.10	Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 64..206 e-value: 4.6E-37 score: 129.2
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 8..57 e-value: 2.5E-10 score: 40.0
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 71..172 e-value: 7.0E-12 score: 45.5
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 69..206 score: 21.550657
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 16..206
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 68..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M002296	Bhi09M002296	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding