Bhi09G002295 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G002295
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr9: 73286955 .. 73287731 (-)
RNA-Seq Expression	Bhi09G002295
Synteny	Bhi09G002295

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTCAAGAGGTTACAGACTATATGATCCTGTCGGTGGAAAGGTTTTTGTGAGTAGAGATGTAATTTTTGAGGAAGAAAAACAATGGGATTGTGATGCAAAACAAATAGTAGCAGTACACTTAGATTTGGGTGATGGTGATGATGCAGATGAGGAAAAAAATGTGAGTGAAAATGAACTTAATAGTGATAAAGAAGATGGAGTTAGGGAGGAGGATCACATTTTTGGTGATGGTGGGCAAAATGTGAGGAATTTAAGGGAATCTCGTGAGAGACGTCTTCCTACATGGATGAATGATTATATTAGTGGAGAAGGTCTTTCAGAGGATGAAGCTCATATGGCACCAGGGATATCAACTGATCCATTGTATTTTGAAGATGCTATACAAGATGGAAATTGGAGGCTGGCCATGGACAATGAAATCAGATCCATTGAGAAGAACAAAACGTGGACACTTGTTGAACTAACAATTGGAGCTAAAAGGATTGGAGTAAAGTGGGTCTACAAAATCAAATACAATGAGCACGGAAAAATTGATAAGTACAAGGCTCGATTGGTTGCTAAAGGTTACTCTCAGCAATATGGAGTAGACTACACAGAAGTTTTTCCACCAGTGGCAAGGATGGATACAGTAAGAATGATTATTGCTCTAGCTGCACAAAAGGATTGGAATATTTTTCAGCTTGATGTTAAGTCAGTTTTTCTCCATGGTGAGTTAACTGAAGATGTTTATGTAGAGCAACCAAAAGGGTATCAAAAGAAGGGTAATGAGCACTTA

mRNA sequence

GAGTCAAGAGGTTACAGACTATATGATCCTGTCGGTGGAAAGGTTTTTGTGAGTAGAGATGTAATTTTTGAGGAAGAAAAACAATGGGATTGTGATGCAAAACAAATAGTAGCAGTACACTTAGATTTGGGTGATGGTGATGATGCAGATGAGGAAAAAAATGTGAGTGAAAATGAACTTAATAGTGATAAAGAAGATGGAGTTAGGGAGGAGGATCACATTTTTGGTGATGGTGGGCAAAATGTGAGGAATTTAAGGGAATCTCGTGAGAGACGTCTTCCTACATGGATGAATGATTATATTAGTGGAGAAGGTCTTTCAGAGGATGAAGCTCATATGGCACCAGGGATATCAACTGATCCATTGTATTTTGAAGATGCTATACAAGATGGAAATTGGAGGCTGGCCATGGACAATGAAATCAGATCCATTGAGAAGAACAAAACGTGGACACTTGTTGAACTAACAATTGGAGCTAAAAGGATTGGAGTAAAGTGGGTCTACAAAATCAAATACAATGAGCACGGAAAAATTGATAAGTACAAGGCTCGATTGGTTGCTAAAGGTTACTCTCAGCAATATGGAGTAGACTACACAGAAGTTTTTCCACCAGTGGCAAGGATGGATACAGTAAGAATGATTATTGCTCTAGCTGCACAAAAGGATTGGAATATTTTTCAGCTTGATGTTAAGTCAGTTTTTCTCCATGGTGAGTTAACTGAAGATGTTTATGTAGAGCAACCAAAAGGGTATCAAAAGAAGGGTAATGAGCACTTA

Coding sequence (CDS)

GAGTCAAGAGGTTACAGACTATATGATCCTGTCGGTGGAAAGGTTTTTGTGAGTAGAGATGTAATTTTTGAGGAAGAAAAACAATGGGATTGTGATGCAAAACAAATAGTAGCAGTACACTTAGATTTGGGTGATGGTGATGATGCAGATGAGGAAAAAAATGTGAGTGAAAATGAACTTAATAGTGATAAAGAAGATGGAGTTAGGGAGGAGGATCACATTTTTGGTGATGGTGGGCAAAATGTGAGGAATTTAAGGGAATCTCGTGAGAGACGTCTTCCTACATGGATGAATGATTATATTAGTGGAGAAGGTCTTTCAGAGGATGAAGCTCATATGGCACCAGGGATATCAACTGATCCATTGTATTTTGAAGATGCTATACAAGATGGAAATTGGAGGCTGGCCATGGACAATGAAATCAGATCCATTGAGAAGAACAAAACGTGGACACTTGTTGAACTAACAATTGGAGCTAAAAGGATTGGAGTAAAGTGGGTCTACAAAATCAAATACAATGAGCACGGAAAAATTGATAAGTACAAGGCTCGATTGGTTGCTAAAGGTTACTCTCAGCAATATGGAGTAGACTACACAGAAGTTTTTCCACCAGTGGCAAGGATGGATACAGTAAGAATGATTATTGCTCTAGCTGCACAAAAGGATTGGAATATTTTTCAGCTTGATGTTAAGTCAGTTTTTCTCCATGGTGAGTTAACTGAAGATGTTTATGTAGAGCAACCAAAAGGGTATCAAAAGAAGGGTAATGAGCACTTA

Protein sequence

ESRGYRLYDPVGGKVFVSRDVIFEEEKQWDCDAKQIVAVHLDLGDGDDADEEKNVSENELNSDKEDGVREEDHIFGDGGQNVRNLRESRERRLPTWMNDYISGEGLSEDEAHMAPGISTDPLYFEDAIQDGNWRLAMDNEIRSIEKNKTWTLVELTIGAKRIGVKWVYKIKYNEHGKIDKYKARLVAKGYSQQYGVDYTEVFPPVARMDTVRMIIALAAQKDWNIFQLDVKSVFLHGELTEDVYVEQPKGYQKKGNEHL

Homology

[Close]

BLAST of Bhi09G002295 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 132.5 bits (332), Expect = 4.9e-31
Identity = 61/140 (43.57%), Postives = 95/140 (67.86%), Query Frame = 0


Query: 120 DPLYFEDAIQDGNWRLAMDNEIRSIEKNKTWTLVELTIGAKRIGVKWVYKIKYNEHGKID 179
           +P  + +A +   W  AMD+EI ++E   TW +  L    K IG KWVYKIKYN  G I+
Sbjct: 85  EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144

Query: 180 KYKARLVAKGYSQQYGVDYTEVFPPVARMDTVRMIIALAAQKDWNIFQLDVKSVFLHGEL 239
           +YKARLVAKGY+QQ G+D+ E F PV ++ +V++I+A++A  ++ + QLD+ + FL+G+L
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204

Query: 240 TEDVYVEQPKGYQKKGNEHL 260
            E++Y++ P GY  +  + L
Sbjct: 205 DEEIYMKLPPGYAARQGDSL 224

[Close]

BLAST of Bhi09G002295 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-17
Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 117 ISTDPLYFEDAIQDGNWRLAMDNEIRSIEKNKTWTLVELTIGAKRIGVKWVYKIKYNEHG 176
           I  +P     A++D  W  AM  E+ ++ +NKTW LV   +    +G KWV+K K +  G
Sbjct: 24  IKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDG 83

Query: 177 KIDKYKARLVAKGYSQQYGVDYTEVFPPVARMDTVRMIIALAAQ 221
            +D+ KARLVAKG+ Q+ G+ + E + PV R  T+R I+ +A Q
Sbjct: 84  TLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ 127

[Close]

BLAST of Bhi09G002295 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 5.1e-33
Identity = 88/271 (32.47%), Postives = 143/271 (52.77%), Query Frame = 0


Query: 1   ESRGYRLYDPVGGKVFVSRDVIF-EEEKQWDCDAKQIVA-------VHLDLGDGDDADEE 60
           E  GYRL+DPV  KV  SRDV+F E E +   D  + V        V +     +    E
Sbjct: 682 EEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAE 741

Query: 61  KNVSENELNSDKEDGVREEDHIFGDGGQNVRNLRESRERRLPTWMNDYISGEGLS-EDEA 120
               E     ++   V E+     +G + V +  +  E+  P   ++    E        
Sbjct: 742 STTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTE 801

Query: 121 HMAPGISTDPLYFEDAI---QDGNWRLAMDNEIRSIEKNKTWTLVELTIGAKRIGVKWVY 180
           ++      +P   ++ +   +      AM  E+ S++KN T+ LVEL  G + +  KWV+
Sbjct: 802 YVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVF 861

Query: 181 KIKYNEHGKIDKYKARLVAKGYSQQYGVDYTEVFPPVARMDTVRMIIALAAQKDWNIFQL 240
           K+K +   K+ +YKARLV KG+ Q+ G+D+ E+F PV +M ++R I++LAA  D  + QL
Sbjct: 862 KLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQL 921

Query: 241 DVKSVFLHGELTEDVYVEQPKGYQKKGNEHL 260
           DVK+ FLHG+L E++Y+EQP+G++  G +H+
Sbjct: 922 DVKTAFLHGDLEEEIYMEQPEGFEVAGKKHM 952

[Close]

BLAST of Bhi09G002295 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.1e-27
Identity = 60/141 (42.55%), Postives = 89/141 (63.12%), Query Frame = 0


Query: 119  TDPLYFEDAIQDGNWRLAMDNEIRSIEKNKTWTLV-----ELTIGAKRIGVKWVYKIKYN 178
            ++P     A++D  WR AM +EI +   N TW LV      +TI    +G +W++  KYN
Sbjct: 954  SEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTI----VGCRWIFTKKYN 1013

Query: 179  EHGKIDKYKARLVAKGYSQQYGVDYTEVFPPVARMDTVRMIIALAAQKDWNIFQLDVKSV 238
              G +++YKARLVAKGY+Q+ G+DY E F PV +  ++R+++ +A  + W I QLDV + 
Sbjct: 1014 SDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNA 1073

Query: 239  FLHGELTEDVYVEQPKGYQKK 255
            FL G LT+DVY+ QP G+  K
Sbjct: 1074 FLQGTLTDDVYMSQPPGFIDK 1090

[Close]

BLAST of Bhi09G002295 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.7e-26
Identity = 58/142 (40.85%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 118  STDPLYFEDAIQDGNWRLAMDNEIRSIEKNKTWTLV-----ELTIGAKRIGVKWVYKIKY 177
            +++P     A++D  WR AM +EI +   N TW LV      +TI    +G +W++  K+
Sbjct: 936  NSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTI----VGCRWIFTKKF 995

Query: 178  NEHGKIDKYKARLVAKGYSQQYGVDYTEVFPPVARMDTVRMIIALAAQKDWNIFQLDVKS 237
            N  G +++YKARLVAKGY+Q+ G+DY E F PV +  ++R+++ +A  + W I QLDV +
Sbjct: 996  NSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNN 1055

Query: 238  VFLHGELTEDVYVEQPKGYQKK 255
             FL G LT++VY+ QP G+  K
Sbjct: 1056 AFLQGTLTDEVYMSQPPGFVDK 1073

[Close]

BLAST of Bhi09G002295 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 112.1 bits (279), Expect = 9.6e-24
Identity = 51/133 (38.35%), Postives = 84/133 (63.16%), Query Frame = 0


Query: 118  STDPLYFEDAIQDGNWRLAMDNEIRSIEKNKTWTLVELTIGAKRIGVKWVYKIKYNEHGK 177
            S D + + D     +W  A++ E+ + + N TWT+ +       +  +WV+ +KYNE G 
Sbjct: 893  SFDEIQYRD--DKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGN 952

Query: 178  IDKYKARLVAKGYSQQYGVDYTEVFPPVARMDTVRMIIALAAQKDWNIFQLDVKSVFLHG 237
              +YKARLVA+G++Q+Y +DY E F PVAR+ + R I++L  Q +  + Q+DVK+ FL+G
Sbjct: 953  PIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNG 1012

Query: 238  ELTEDVYVEQPKG 251
             L E++Y+  P+G
Sbjct: 1013 TLKEEIYMRLPQG 1023

[Close]

BLAST of Bhi09G002295 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-16
Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 117 ISTDPLYFEDAIQDGNWRLAMDNEIRSIEKNKTWTLVELTIGAKRIGVKWVYKIKYNEHG 176
           I  +P     A++D  W  AM  E+ ++ +NKTW LV   +    +G KWV+K K +  G
Sbjct: 24  IKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDG 83

Query: 177 KIDKYKARLVAKGYSQQYGVDYTEVFPPVARMDTVRMIIALAAQ 221
            +D+ KARLVAKG+ Q+ G+ + E + PV R  T+R I+ +A Q
Sbjct: 84  TLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ 127

[Close]

BLAST of Bhi09G002295 vs. ExPASy TrEMBL
Match: A0A2N9H9R9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39009 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 5.0e-100
Identity = 190/264 (71.97%), Postives = 219/264 (82.95%), Query Frame = 0


Query: 1   ESRGYRLYDPVGGKVFVSRDVIFEEEKQWDCDA--KQIVAVHLDLGDGD-DADEEKNVSE 60
           ES+GYRL+DPV  +V VSRDVIFEEEKQWD D   ++ + V L+ GDGD D + E  VSE
Sbjct: 690 ESKGYRLFDPVAKRVVVSRDVIFEEEKQWDWDVSYEEQIVVDLEWGDGDGDGENEGGVSE 749

Query: 61  --NELNSDKEDGVREEDHIFGDGGQNVRNLRESRERRLPTWMNDYISGEGLSEDEAHMAP 120
             N  N+D E GVREE+    +G + VR LR+SRER+ PTWM DY+SGEGL EDE HMA 
Sbjct: 750 NGNRENTDVE-GVREEEDGSSEGEERVRELRQSRERQPPTWMGDYVSGEGLFEDEVHMAL 809

Query: 121 GISTDPLYFEDAIQDGNWRLAMDNEIRSIEKNKTWTLVELTIGAKRIGVKWVYKIKYNEH 180
             STDPLYFE+A++  NWRLAM++EI+SIEKN+TWTL EL  GAKRIGVKWVYK KYNEH
Sbjct: 810 VESTDPLYFEEAVKSANWRLAMNSEIKSIEKNQTWTLTELPAGAKRIGVKWVYKTKYNEH 869

Query: 181 GKIDKYKARLVAKGYSQQYGVDYTEVFPPVARMDTVRMIIALAAQKDWNIFQLDVKSVFL 240
           GKIDKYKARLVAKGYSQ+YGVDYTEVF PVARMDTVRMIIALAAQK+W IFQLDVKS FL
Sbjct: 870 GKIDKYKARLVAKGYSQKYGVDYTEVFAPVARMDTVRMIIALAAQKNWTIFQLDVKSAFL 929

Query: 241 HGELTEDVYVEQPKGYQKKGNEHL 260
           HGEL+E+VYVEQP+GY+KKG+EHL
Sbjct: 930 HGELSEEVYVEQPRGYEKKGSEHL 952

[Close]

BLAST of Bhi09G002295 vs. ExPASy TrEMBL
Match: A0A2N9GWV7 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31696 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 5.0e-100
Identity = 190/264 (71.97%), Postives = 219/264 (82.95%), Query Frame = 0


Query: 1   ESRGYRLYDPVGGKVFVSRDVIFEEEKQWDCDA--KQIVAVHLDLGDGD-DADEEKNVSE 60
           ES+GYRL+DPV  +V VSRDVIFEEEKQWD D   ++ + V L+ GDGD D + E  VSE
Sbjct: 593 ESKGYRLFDPVAKRVVVSRDVIFEEEKQWDWDVSYEEQIVVDLEWGDGDGDGENEGGVSE 652

Query: 61  --NELNSDKEDGVREEDHIFGDGGQNVRNLRESRERRLPTWMNDYISGEGLSEDEAHMAP 120
             N  N+D E GVREE+    +G + VR LR+SRER+ PTWM DY+SGEGL EDE HMA 
Sbjct: 653 NGNRENTDVE-GVREEEDGSSEGEERVRELRQSRERQPPTWMGDYVSGEGLFEDEVHMAL 712

Query: 121 GISTDPLYFEDAIQDGNWRLAMDNEIRSIEKNKTWTLVELTIGAKRIGVKWVYKIKYNEH 180
             STDPLYFE+A++  NWRLAM++EI+SIEKN+TWTL EL  GAKRIGVKWVYK KYNEH
Sbjct: 713 VESTDPLYFEEAVKSANWRLAMNSEIKSIEKNQTWTLTELPAGAKRIGVKWVYKTKYNEH 772

Query: 181 GKIDKYKARLVAKGYSQQYGVDYTEVFPPVARMDTVRMIIALAAQKDWNIFQLDVKSVFL 240
           GKIDKYKARLVAKGYSQ+YGVDYTEVF PVARMDTVRMIIALAAQK+W IFQLDVKS FL
Sbjct: 773 GKIDKYKARLVAKGYSQKYGVDYTEVFAPVARMDTVRMIIALAAQKNWTIFQLDVKSAFL 832

Query: 241 HGELTEDVYVEQPKGYQKKGNEHL 260
           HGEL+E+VYVEQP+GY+KKG+EHL
Sbjct: 833 HGELSEEVYVEQPRGYEKKGSEHL 855

[Close]

BLAST of Bhi09G002295 vs. ExPASy TrEMBL
Match: A0A4Y1QX25 (ADP glucose pyrophosphorylase large subunit 1 OS=Prunus dulcis OX=3755 GN=Prudu_005175 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 2.1e-98
Identity = 189/270 (70.00%), Postives = 219/270 (81.11%), Query Frame = 0


Query: 1   ESRGYRLYDPVGGKVFVSRDVIFEEEKQWDCDA---KQIVAVHLDLGDGDDADEEKNVSE 60
           ES+GYRL+DPV  +V VSRDVIFEEEKQWD D    KQIV V L+ GDGD  +EE  VSE
Sbjct: 692 ESKGYRLFDPVAKRVVVSRDVIFEEEKQWDWDVSYEKQIV-VDLEWGDGDGENEE-GVSE 751

Query: 61  N--------ELNSDKEDGVREEDHIFGDGGQNVRNLRESRERRLPTWMNDYISGEGLSED 120
           N        E+   ++  VREE++   +G + V  LR+ RER+ PTWM DY+SGEGLSED
Sbjct: 752 NGNRENTDGEVGKTRDTEVREEEYGSSEGEERVGELRQPRERQPPTWMGDYVSGEGLSED 811

Query: 121 EAHMAPGISTDPLYFEDAIQDGNWRLAMDNEIRSIEKNKTWTLVELTIGAKRIGVKWVYK 180
           E HMA   STDPL+FE+A++  NWRLAM++EI+SIEKN+TWTL EL  GAKRIGVKWVYK
Sbjct: 812 EVHMALVESTDPLHFEEAVKSANWRLAMNSEIKSIEKNQTWTLTELPAGAKRIGVKWVYK 871

Query: 181 IKYNEHGKIDKYKARLVAKGYSQQYGVDYTEVFPPVARMDTVRMIIALAAQKDWNIFQLD 240
            KYNEHGKIDKYKARLVAKGYSQ+YGVDYTEVF PVARMDT+RMIIALAAQK+W IFQLD
Sbjct: 872 TKYNEHGKIDKYKARLVAKGYSQKYGVDYTEVFAPVARMDTIRMIIALAAQKNWTIFQLD 931

Query: 241 VKSVFLHGELTEDVYVEQPKGYQKKGNEHL 260
           VKS FLHGEL+EDVYVEQP+GY+KKG+EHL
Sbjct: 932 VKSAFLHGELSEDVYVEQPRGYEKKGSEHL 959

[Close]

BLAST of Bhi09G002295 vs. ExPASy TrEMBL
Match: A0A2N9GII1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27255 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 1.1e-94
Identity = 180/261 (68.97%), Postives = 205/261 (78.54%), Query Frame = 0


Query: 1   ESRGYRLYDPVGGKVFVSRDVIFEEEKQWDCDA--KQIVAVHLDLGDGDDADEEKNVSEN 60
           ES+GYRL+DPV  +V VSRDVIFEEEKQWD D   ++ + V L+ GDGD           
Sbjct: 399 ESKGYRLFDPVAKRVVVSRDVIFEEEKQWDWDVSYEEQIVVDLEWGDGDG---------- 458

Query: 61  ELNSDKEDGVREEDHIFGDGGQNVRNLRESRERRLPTWMNDYISGEGLSEDEAHMAPGIS 120
                  DG  EE      G + VR LR+SRER+ PTWM DY+SGEGL EDE HMA   S
Sbjct: 459 -------DGENEE-----GGEERVRELRQSRERQPPTWMGDYVSGEGLFEDEVHMALVES 518

Query: 121 TDPLYFEDAIQDGNWRLAMDNEIRSIEKNKTWTLVELTIGAKRIGVKWVYKIKYNEHGKI 180
           TDPLYFE+A++  NWRLAM++EI+SIEKN+TWTL EL  GAKRIGVKWVYK KYNEHGKI
Sbjct: 519 TDPLYFEEAVKSANWRLAMNSEIKSIEKNQTWTLTELPAGAKRIGVKWVYKTKYNEHGKI 578

Query: 181 DKYKARLVAKGYSQQYGVDYTEVFPPVARMDTVRMIIALAAQKDWNIFQLDVKSVFLHGE 240
           DKYKARLVAKGYSQ+YGVDYTEVF PVARMDTVRMIIALAAQK+W IFQLDVKS FLHGE
Sbjct: 579 DKYKARLVAKGYSQKYGVDYTEVFAPVARMDTVRMIIALAAQKNWTIFQLDVKSAFLHGE 637

Query: 241 LTEDVYVEQPKGYQKKGNEHL 260
           L+E+VYVEQP+GY+KKG+EHL
Sbjct: 639 LSEEVYVEQPRGYEKKGSEHL 637

[Close]

BLAST of Bhi09G002295 vs. ExPASy TrEMBL
Match: A0A438HLL6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1266 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.6e-93
Identity = 183/272 (67.28%), Postives = 210/272 (77.21%), Query Frame = 0


Query: 1   ESRGYRLYDPVGGKVFVSRDVIFEEEKQWDCDA--KQIVAVHLDLGDGD-------DADE 60
           ES+GYRL+DP+  +V VSRDVIFEEEKQWD D   K+ + V L  GDGD       D + 
Sbjct: 139 ESKGYRLFDPIAKRVVVSRDVIFEEEKQWDWDVSYKEQMVVDLKWGDGDSDGDSDGDGEN 198

Query: 61  EKNVSENELNSDKEDGVREEDHIFG----DGGQNVRNLRESRERRLPTWMNDYISGEGLS 120
           E+ VSEN  N +  DG   E H  G    +G + VR LR+SR+R+ PTWM DY+SGEGL 
Sbjct: 199 EEGVSENG-NRENIDGEVGETHDKGVGSSEGEERVRELRQSRDRQPPTWMGDYVSGEGLF 258

Query: 121 EDEAHMAPGISTDPLYFEDAIQDGNWRLAMDNEIRSIEKNKTWTLVELTIGAKRIGVKWV 180
           EDE HMA   STDPLYFE A+ + NWRLAM+NEI+SIEKN+TWTL EL  GAK+IGVKWV
Sbjct: 259 EDEVHMALVESTDPLYFEAAVNNANWRLAMNNEIKSIEKNQTWTLTELPAGAKKIGVKWV 318

Query: 181 YKIKYNEHGKIDKYKARLVAKGYSQQYGVDYTEVFPPVARMDTVRMIIALAAQKDWNIFQ 240
           YK KYNEH KIDKYK RLVAKGYSQ+YGVDY EVF PVARMDT+RMIIALAAQK+W IFQ
Sbjct: 319 YKTKYNEHEKIDKYKDRLVAKGYSQKYGVDYIEVFAPVARMDTIRMIIALAAQKNWTIFQ 378

Query: 241 LDVKSVFLHGELTEDVYVEQPKGYQKKGNEHL 260
           L VK  FLHGEL+EDVYVEQPKGY+KKG+EHL
Sbjct: 379 LHVKLAFLHGELSEDVYVEQPKGYEKKGSEHL 409

The following BLAST results are available for this feature:

BLAST of Bhi09G002295 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	4.9e-31	43.57	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	1.4e-17	39.42	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

BLAST of Bhi09G002295 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	5.1e-33	32.47	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q94HW2	7.1e-27	42.55	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.7e-26	40.85	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	9.6e-24	38.35	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92520	1.9e-16	39.42	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Bhi09G002295 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9H9R9	5.0e-100	71.97	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39009 PE=4 SV=1	[more]
A0A2N9GWV7	5.0e-100	71.97	Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB...	[more]
A0A4Y1QX25	2.1e-98	70.00	ADP glucose pyrophosphorylase large subunit 1 OS=Prunus dulcis OX=3755 GN=Prudu_...	[more]
A0A2N9GII1	1.1e-94	68.97	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27255 PE=4 SV=1	[more]
A0A438HLL6	1.6e-93	67.28	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 147..257 e-value: 4.6E-37 score: 127.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..80
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 132..257
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 146..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M002295	Bhi09M002295	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034645	cellular macromolecule biosynthetic process
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008270	zinc ion binding