Bhi09G002127 (gene) Wax gourd (B227) v1

Overview
NameBhi09G002127
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionTranscription initiation factor IIA subunit 2
Locationchr9: 68161440 .. 68163424 (-)
RNA-Seq ExpressionBhi09G002127
SyntenyBhi09G002127
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAAATAAAGTCGCCTTCCTTCTGGCTTATAGGGACAAATTCGTCACTTTGTTCTGTCTCTATATATACCCTCATCTACAAAATCTAGGGTATAAAAGGCCCCAAATTTCTTCGCTCGCAAAAAGCTACGGAGCCAACGTTAATTCCTTGCTTTACTCTCTCTTTATTATTATTATCTCTTCGTTCATTCCTTTTCAAATTGATCTCTCGCTTTAATTTCAAAGATTTTGCCAGCTTTCTCGAATTCTGACGCTATGTTCCAAAATTTTCTCAAGTTTTTTCAATTCCGGATGTGTATTTTTCAACTAAATTTGATATCTTAACTGAAGAGCTTTCATATTTAGCAGATCTTGATTTCCGAAGAAGAATGGCAACATTCGAACTCTATCGCAGATCGACGATCGGAATGTGTTTGACTGAAACTTTGGATGAAATGGTCCAGAACGGTACTCTTAGTCCTGAGCTTGCTATTCAGGTTCTTGTCCAGTTCGATAAGGTACAGCCTAAGCTGTTTGGAGATGTGGTATATTTTGGATTTGTGTTCATAATTTAGGTCTTGTTTGATTTAATTTCTTACTGCTTCTGGCTTTTGCAGTCCATGACTGAGGCTTTGGAATCACAGGTGAAAAGCAAGGTGACTATCAAGGTATCTTTTCTTGGCTTGTGAATTTGATGATTCTTTAATGCCATAGATTTATGTTGCTAAATAAGTCAACTTTATAAATTTGAAACGTATTTTTACTGATAAGAGGAATTGATTGTGTTTTCCTGCTCTGATATTGCTCTATTTGTGCTCTAGAGCACCTTTAGCCTTGAGCCAAATTGTTTTGTCAATAACACATCTATATGTCAAATGTATAATGAAACATTTCCCCCTGGTCTTTTGGTTGCCACGAAGTGAATGGAGAACCATGATCTAGAAAAGAGATGGAAGTTTCGTTAATGGAACTTTTGATATCTATGTGATTAGGTTGCTTGTGTTCATTCCATTCCTTGCTTTGTTATCCCCTGATTCCTGAAACATTTTTCATTATAAAATATTGCATCTTGAATAAGTTTCTCTGGGATAAACTTCACAATTCTTTGTGTTTTTGGAATCTGGGGATAATCTCTGTCATTAGGATGTGGCCATATCAGGTTCTACAATGAGTCATGGATTGACTTATGAAGTATTTGTAAGTGTAAAAAAAGTGTTTATAAGCACTTAAAAGGTCATTCCAAACGGTAATGACTCCCAACTCTTGTTTTTTGGATTTTCTAACAATACTCAGTTGAAAGTTCATTGTACATATATTGTATGAGGACCATTTCTTTAAAAGAAAGGATGAAATCAAAATCACACAGCGCAATGTTTATGGAGTTATATTGTCAACAGGCCTGGCATTTTTTTTAGGTCCTCCCAGCCATCTCTTTTGACTCTTTCTTTCAGAAGACCATTCAATTTGTCCTTTGTTTTTTTTTTTTTTTTTTTTTTTTGCTTCCTCATTTTGCCAAGTGAATTTATTTAATAAGGACCCCTTCTAACACTTATTCTGTAGCGATTTCTGAACCTCTTTGTACTCCTACTATCTTGCAACAGGGGCATTTGCACACCTATCGGTTCTGCGACAATGTTTGGACATTCATTTTGCAAGATGCAACATTTAAGAACGAGGATTCCTCAGAGAGTGTTGGGAGAATTAAAATAGTAGCTTGTGACTCAAAGTTACTCTCGCAATAAGCTTCTAGACATGAAGTTCTTTAGATAAAATTTGCATAATTATTGCCAATGATGGAGGGAAAAATAGTCATGGTGAGGAAAAGGCCATTCAGGAAGAGATTCAAACGTGATTTTGTAAAGTCATCGACTTGAACAGCAAAAAGAATTACACCGATGATACATTTGACTGTAATTGGCTTTTAAAGCTGATTACATAACAATTATACGACCCTTCTAGTTTAATGATAATAAAATTTGATATCTGTTTTAATATTATGCTATTAA

mRNA sequence

GAGAAATAAAGTCGCCTTCCTTCTGGCTTATAGGGACAAATTCGTCACTTTGTTCTGTCTCTATATATACCCTCATCTACAAAATCTAGGGTATAAAAGGCCCCAAATTTCTTCGCTCGCAAAAAGCTACGGAGCCAACATCTTGATTTCCGAAGAAGAATGGCAACATTCGAACTCTATCGCAGATCGACGATCGGAATGTGTTTGACTGAAACTTTGGATGAAATGGTCCAGAACGGTACTCTTAGTCCTGAGCTTGCTATTCAGGTTCTTGTCCAGTTCGATAAGTCCATGACTGAGGCTTTGGAATCACAGGTGAAAAGCAAGGTGACTATCAAGGGGCATTTGCACACCTATCGGTTCTGCGACAATGTTTGGACATTCATTTTGCAAGATGCAACATTTAAGAACGAGGATTCCTCAGAGAGTGTTGGGAGAATTAAAATAGTAGCTTGTGACTCAAAGTTACTCTCGCAATAAGCTTCTAGACATGAAGTTCTTTAGATAAAATTTGCATAATTATTGCCAATGATGGAGGGAAAAATAGTCATGGTGAGGAAAAGGCCATTCAGGAAGAGATTCAAACGTGATTTTGTAAAGTCATCGACTTGAACAGCAAAAAGAATTACACCGATGATACATTTGACTGTAATTGGCTTTTAAAGCTGATTACATAACAATTATACGACCCTTCTAGTTTAATGATAATAAAATTTGATATCTGTTTTAATATTATGCTATTAA

Coding sequence (CDS)

ATGGCAACATTCGAACTCTATCGCAGATCGACGATCGGAATGTGTTTGACTGAAACTTTGGATGAAATGGTCCAGAACGGTACTCTTAGTCCTGAGCTTGCTATTCAGGTTCTTGTCCAGTTCGATAAGTCCATGACTGAGGCTTTGGAATCACAGGTGAAAAGCAAGGTGACTATCAAGGGGCATTTGCACACCTATCGGTTCTGCGACAATGTTTGGACATTCATTTTGCAAGATGCAACATTTAAGAACGAGGATTCCTCAGAGAGTGTTGGGAGAATTAAAATAGTAGCTTGTGACTCAAAGTTACTCTCGCAATAA

Protein sequence

MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIKGHLHTYRFCDNVWTFILQDATFKNEDSSESVGRIKIVACDSKLLSQ
Homology
[Close]
BLAST of Bhi09G002127 vs. TAIR 10
Match: AT4G24440.1 (transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) )

HSP 1 Score: 193.0 bits (489), Expect = 1.2e-49
Identity = 94/106 (88.68%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60
           MATFELYRRSTIGMCLTETLDEMVQ+GTLSPELAIQVLVQFDKSMTEALESQVK+KV+IK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKTKVSIK 60

Query: 61  GHLHTYRFCDNVWTFILQDATFKNEDSSESVGRIKIVACDSKLLSQ 107
           GHLHTYRFCDNVWTFILQDA FK++D  E+V R+KIVACDSKLL+Q
Sbjct: 61  GHLHTYRFCDNVWTFILQDAMFKSDDRQENVSRVKIVACDSKLLTQ 106

[Close]
BLAST of Bhi09G002127 vs. TAIR 10
Match: AT4G24440.2 (transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) )

HSP 1 Score: 193.0 bits (489), Expect = 1.2e-49
Identity = 94/106 (88.68%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60
           MATFELYRRSTIGMCLTETLDEMVQ+GTLSPELAIQVLVQFDKSMTEALESQVK+KV+IK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKTKVSIK 60

Query: 61  GHLHTYRFCDNVWTFILQDATFKNEDSSESVGRIKIVACDSKLLSQ 107
           GHLHTYRFCDNVWTFILQDA FK++D  E+V R+KIVACDSKLL+Q
Sbjct: 61  GHLHTYRFCDNVWTFILQDAMFKSDDRQENVSRVKIVACDSKLLTQ 106

[Close]
BLAST of Bhi09G002127 vs. ExPASy Swiss-Prot
Match: Q39236 (Transcription initiation factor IIA subunit 2 OS=Arabidopsis thaliana OX=3702 GN=TFIIA-S PE=3 SV=2)

HSP 1 Score: 193.0 bits (489), Expect = 1.8e-48
Identity = 94/106 (88.68%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60
           MATFELYRRSTIGMCLTETLDEMVQ+GTLSPELAIQVLVQFDKSMTEALESQVK+KV+IK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKTKVSIK 60

Query: 61  GHLHTYRFCDNVWTFILQDATFKNEDSSESVGRIKIVACDSKLLSQ 107
           GHLHTYRFCDNVWTFILQDA FK++D  E+V R+KIVACDSKLL+Q
Sbjct: 61  GHLHTYRFCDNVWTFILQDAMFKSDDRQENVSRVKIVACDSKLLTQ 106

[Close]
BLAST of Bhi09G002127 vs. ExPASy Swiss-Prot
Match: A2XZI2 (Transcription initiation factor IIA subunit 2 OS=Oryza sativa subsp. indica OX=39946 GN=TFIIAy PE=3 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 2.3e-48
Identity = 93/106 (87.74%), Postives = 103/106 (97.17%), Query Frame = 0 

Query: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60
           MATFELYRRSTIGMCLTETLDEMV +GTLSPELAIQVLVQFDKSMTEALE+QVKSKV+IK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK 60

Query: 61  GHLHTYRFCDNVWTFILQDATFKNEDSSESVGRIKIVACDSKLLSQ 107
           GHLHTYRFCDNVWTFIL +A+FKNE+++E VG++KIVACDSKLLSQ
Sbjct: 61  GHLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSKLLSQ 106

[Close]
BLAST of Bhi09G002127 vs. ExPASy Swiss-Prot
Match: Q0DLD3 (Transcription initiation factor IIA subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TFIIAy PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 2.3e-48
Identity = 93/106 (87.74%), Postives = 103/106 (97.17%), Query Frame = 0 

Query: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60
           MATFELYRRSTIGMCLTETLDEMV +GTLSPELAIQVLVQFDKSMTEALE+QVKSKV+IK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK 60

Query: 61  GHLHTYRFCDNVWTFILQDATFKNEDSSESVGRIKIVACDSKLLSQ 107
           GHLHTYRFCDNVWTFIL +A+FKNE+++E VG++KIVACDSKLLSQ
Sbjct: 61  GHLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSKLLSQ 106

[Close]
BLAST of Bhi09G002127 vs. ExPASy Swiss-Prot
Match: O74948 (Transcription initiation factor IIA subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=toa2 PE=3 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-26
Identity = 52/99 (52.53%), Postives = 80/99 (80.81%), Query Frame = 0 

Query: 4   FELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIKGHL 63
           +ELYRRS+IG+ LT+ LD+++  G +SP+LA++VL  FDKSMTEAL  +V+S++T KGHL
Sbjct: 5   YELYRRSSIGISLTDALDDLISQGKISPQLAMKVLFNFDKSMTEALAEKVRSRLTFKGHL 64

Query: 64  HTYRFCDNVWTFILQDATFKNEDSSESVGRIKIVACDSK 103
            TYRFCD VWTFI+++ +F+ ++ + +  +I+IVAC ++
Sbjct: 65  DTYRFCDEVWTFIIKNPSFRFDNETVTSNKIRIVACATR 103

[Close]
BLAST of Bhi09G002127 vs. ExPASy Swiss-Prot
Match: Q54ND1 (Transcription initiation factor IIA subunit 2 OS=Dictyostelium discoideum OX=44689 GN=gtf2a2 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.1e-25
Identity = 56/101 (55.45%), Postives = 76/101 (75.25%), Query Frame = 0 

Query: 4   FELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIKGHL 63
           +ELYR+STIG  LT+TL+E++ N  +S  L  ++L QFDK++ EAL + VK+K T KG L
Sbjct: 8   YELYRKSTIGEALTDTLEELLINQYISNSLYQKILTQFDKTINEALSNTVKAKTTFKGSL 67

Query: 64  HTYRFCDNVWTFILQDATFKNE-DSSESVGRIKIVACDSKL 104
           HTYRFCD+VWTFIL++A FK E +    V R+KIVACD+ +
Sbjct: 68  HTYRFCDSVWTFILENAQFKTEANEIVKVDRVKIVACDANV 108

[Close]
BLAST of Bhi09G002127 vs. ExPASy TrEMBL
Match: A0A0A0LMF8 (Transcription initiation factor IIA subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_2G401990 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.5e-50
Identity = 103/106 (97.17%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60
           MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVT+K
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTVK 60

Query: 61  GHLHTYRFCDNVWTFILQDATFKNEDSSESVGRIKIVACDSKLLSQ 107
           GHLHTYRFCDNVWTFILQDA+FKNEDSSE+VGRIKIVACDSKLLSQ
Sbjct: 61  GHLHTYRFCDNVWTFILQDASFKNEDSSENVGRIKIVACDSKLLSQ 106

[Close]
BLAST of Bhi09G002127 vs. ExPASy TrEMBL
Match: A0A1S3B2F6 (Transcription initiation factor IIA subunit 2 OS=Cucumis melo OX=3656 GN=LOC103485407 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.5e-50
Identity = 103/106 (97.17%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60
           MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMT+ALESQVKSKVTIK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTDALESQVKSKVTIK 60

Query: 61  GHLHTYRFCDNVWTFILQDATFKNEDSSESVGRIKIVACDSKLLSQ 107
           GHLHTYRFCDNVWTFILQDA+FKNEDSSE+VGRIKIVACDSKLLSQ
Sbjct: 61  GHLHTYRFCDNVWTFILQDASFKNEDSSETVGRIKIVACDSKLLSQ 106

[Close]
BLAST of Bhi09G002127 vs. ExPASy TrEMBL
Match: A0A6J1J100 (Transcription initiation factor IIA subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111480333 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.5e-50
Identity = 103/106 (97.17%), Postives = 105/106 (99.06%), Query Frame = 0 

Query: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60
           MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60

Query: 61  GHLHTYRFCDNVWTFILQDATFKNEDSSESVGRIKIVACDSKLLSQ 107
           GHLHTYRFCDNVWTFILQDATFKNEDS E+VGRIKIVACDSKLL+Q
Sbjct: 61  GHLHTYRFCDNVWTFILQDATFKNEDSQETVGRIKIVACDSKLLTQ 106

[Close]
BLAST of Bhi09G002127 vs. ExPASy TrEMBL
Match: A0A6J1FTM1 (Transcription initiation factor IIA subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111446721 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.5e-50
Identity = 103/106 (97.17%), Postives = 105/106 (99.06%), Query Frame = 0 

Query: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60
           MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60

Query: 61  GHLHTYRFCDNVWTFILQDATFKNEDSSESVGRIKIVACDSKLLSQ 107
           GHLHTYRFCDNVWTFILQDATFKNEDS E+VGRIKIVACDSKLL+Q
Sbjct: 61  GHLHTYRFCDNVWTFILQDATFKNEDSQETVGRIKIVACDSKLLTQ 106

[Close]
BLAST of Bhi09G002127 vs. ExPASy TrEMBL
Match: A0A6J1BWA2 (Transcription initiation factor IIA subunit 2 OS=Momordica charantia OX=3673 GN=LOC111006284 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.3e-50
Identity = 103/106 (97.17%), Postives = 105/106 (99.06%), Query Frame = 0 

Query: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60
           MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKV+IK
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIK 60

Query: 61  GHLHTYRFCDNVWTFILQDATFKNEDSSESVGRIKIVACDSKLLSQ 107
           GHLHTYRFCDNVWTFILQDATFKNEDS E+VGRIKIVACDSKLLSQ
Sbjct: 61  GHLHTYRFCDNVWTFILQDATFKNEDSQENVGRIKIVACDSKLLSQ 106

The following BLAST results are available for this feature:
BLAST of Bhi09G002127 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G24440.11.2e-4988.68transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) [more]
AT4G24440.21.2e-4988.68transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) [more]
BLAST of Bhi09G002127 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q392361.8e-4888.68Transcription initiation factor IIA subunit 2 OS=Arabidopsis thaliana OX=3702 GN... [more]
A2XZI22.3e-4887.74Transcription initiation factor IIA subunit 2 OS=Oryza sativa subsp. indica OX=3... [more]
Q0DLD32.3e-4887.74Transcription initiation factor IIA subunit 2 OS=Oryza sativa subsp. japonica OX... [more]
O749481.4e-2652.53Transcription initiation factor IIA subunit 2 OS=Schizosaccharomyces pombe (stra... [more]
Q54ND16.1e-2555.45Transcription initiation factor IIA subunit 2 OS=Dictyostelium discoideum OX=446... [more]
BLAST of Bhi09G002127 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMF81.5e-5097.17Transcription initiation factor IIA subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_... [more]
A0A1S3B2F62.5e-5097.17Transcription initiation factor IIA subunit 2 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
A0A6J1J1002.5e-5097.17Transcription initiation factor IIA subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1FTM12.5e-5097.17Transcription initiation factor IIA subunit 2 OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1BWA23.3e-5097.17Transcription initiation factor IIA subunit 2 OS=Momordica charantia OX=3673 GN=... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015871Transcription initiation factor IIA, gamma subunit, C-terminalPFAMPF02751TFIIA_gamma_Ccoord: 60..101
e-value: 1.2E-21
score: 76.5
IPR015871Transcription initiation factor IIA, gamma subunit, C-terminalCDDcd10014TFIIA_gamma_Ccoord: 57..102
e-value: 3.12026E-23
score: 82.2955
IPR015872Transcription initiation factor IIA, gamma subunit, N-terminalPFAMPF02268TFIIA_gamma_Ncoord: 4..49
e-value: 1.1E-22
score: 79.8
IPR015872Transcription initiation factor IIA, gamma subunit, N-terminalCDDcd10145TFIIA_gamma_Ncoord: 4..49
e-value: 1.67044E-22
score: 80.6876
IPR003194Transcription initiation factor IIA, gamma subunitPIRSFPIRSF009415TFIIA_gamma_humcoord: 1..106
e-value: 2.6E-49
score: 163.9
IPR003194Transcription initiation factor IIA, gamma subunitPANTHERPTHR10966TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2coord: 1..106
IPR009083Transcription factor IIA, alpha-helical domainGENE3D1.10.287.190coord: 3..54
e-value: 3.1E-24
score: 86.6
IPR009088Transcription factor IIA, beta-barrelGENE3D2.30.18.10coord: 55..105
e-value: 1.4E-23
score: 84.5
IPR009088Transcription factor IIA, beta-barrelSUPERFAMILY50784Transcription factor IIA (TFIIA), beta-barrel domaincoord: 52..102
NoneNo IPR availablePANTHERPTHR10966:SF8TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2coord: 1..106
NoneNo IPR availableSUPERFAMILY47396Transcription factor IIA (TFIIA), alpha-helical domaincoord: 4..54

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M002127Bhi09M002127mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051123 RNA polymerase II preinitiation complex assembly
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
cellular_component GO:0005672 transcription factor TFIIA complex
molecular_function GO:0016251 RNA polymerase II general transcription initiation factor activity
molecular_function GO:0017025 TBP-class protein binding