Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGAAATTGCCAGGATTTCCACGCGCGATTTAAGATTAGGGTTTCTTTCTCTCTTCTCTCTCTTTTTTCAGCTGCTCTTCTTCCCTAATTGGGGATTCGATCTCCGAGTTTTAACTTCCTCTTCCTTACTTTGAAATTCGTTTCCTAACTGCTTCCATCGGCTTTCTGATTTTACCTGCATTCAATTTCTGAATTTGAATGAATCTCTAGAGGGGGTTGTTGAAGAAGGTAGAAATGGATGAAAGTGAGGGTGGGTTCGGTGAGGGTGTGGATCAGATTGATCAGTTTCATCGGAACGAGGCCATTTCAGCCGTTGCTGATGATGGTTTCTTGGGCGAAGATGAGGATGAATACGAGGACTTGTATAACGATGTTAATGTTGGGGAAGGGTTCCTTCAGTCGTTGAGGAAGAACGATGATTTGGGATTCAAAACCGAGGAGCCCAAGATGGAGCCTCCTGCACCTGCACCACCCAGTTCCGGTGCTTCCATACCTGGTGTTGGTGGAGGTGCGACTGAAGTTGCTGGTTTAGGAGATGGTGGGCACAGTGTTTCGGAGAGAGTAACCGAGGGTTACAATCAGATTCCAGATATAAGAGCGAATGAGATGGCTATCAGAGGTGGGGCGGGACCGGGGCCGCCTGTAGGCGGCGGAGGTGGGATTAGGGTTGAATTAGGGCAAGGGAGTAAAACCAATGAGTTGGAGGAGCGAAGCAATAATAACATAGCTGCGCATCAGGCTCCGCAGCAGCAACAGCCACAGCTGCAGGCGCAGCCACAGCCGCAACACCACCACCAACCACCTCAGAGCGGAGTCTTAGGAAATCCTGGGAGTGTAGAAAATGAAGGTTTGCTAAGGCAAGGAGGTGGAGTAAATGTAAATGGGGTTGGTGGAAATGGGTTCGGTAACATGGGGAGTGCAGGGGGAGGTGGTGGTGGAACGATTTTGTTTGTTGGTGATTTACATTGGTGGACTACAGATGCGGAGCTGGAGGCAGAACTCTGTAAGTATGGTCCGTTGAAGGAGGTCAAGTTTTATGACGAGAAAGCCAGTGGAAAATCAAAGGGCTATTGCCAGGTTGAGTTTTATGATCCTTCTGCTGCCACAGCTTGCAAGGAGGGAATGAATGGGCATATTTTTAATGGACGTCCATGTGTTGTTGCATATGCATCACCCTTTAGTGTTAAGAGGATGGGAGAAGCCCAAGTGAATAGGAACCAACAGATGTCCCAAGCTACTAATCCTCAAGCAAGGAGGGGTCCTAATGATGCTGTAGGTAAAATTGGTGGAAGTAACATTGCAACCGGTGGTAACTATCAAGGTGGTGATAACAATAGAGGTTCTGGGAGAGGTAATTGGGGAAGAGGTAATGCACATGGAATGGGAGGTCGAGGACCAGCTGGTCCAATGAGGAGTAGGGGTGGTGGGATGGGTGGCAGAGGTATAATGGGAAATGGTGGAAACGGATTTGGACAAGGAATTGGTGCTGCCCCTCCTTTATTACATCCGCAATCAATGATGGCCCAAGGTTTTGATCCATCTTTTGGTGCACCTATGGGAAGAATGGGCACATATGGTGGTTTTCCTGGAGCTCCGGCTCCCCCTTTCTCTGGAATTTTATCGTCCTTTCCTCCTGTTGGGGGTGTTGGCCTTCCTGGTGTAGCTCCTCATGTGAACCCAGCATTTTTTGGAAGGGGTATGCCTATGAATGGAATGGGCATGATGCCAACATCGGGTGTTGATGGACCTAATATGGGAATGTGGTCTGATCCTAGTATGGGTGGATGGGGCAGTGAAGAACATGGTGGTGGGAGAGCTGACGAGTCTAGTTATGGAGAAGAAGCTGGTTCTGACCAGCAATATGGTGAAGGCAGTCATGACAGAGGGGCATGGGCAAATTCAACAAAGGAGAAAGATAGAGGCTCCGAAAGGGACTGGTCACAGTCTTCTGATAGAAGGTATCGAGATGATAGAGATGTTGGATATGATAGAGAGAGATCCAAAGAAAAAGATCCGGGGCCTGACCATGATTGGCCAGATAGGAGGCCACGTGATGATAGAGATATAGGGCGTGAAAGGGATAAAGATAGGGACCGAGATAGGGATAGAGAACGATCTCGAGATTATGAGCGTGGTCATCATGACCGTGATCGTGAACGTGACAGAGATCGTGACCGTGATAGGTACAAGGAAGATAGGGATAGATATTCTGATCATCATAGGTACAGAGACCGGGAACCAGAGCATGAGGAGGATTGGGAAAGGGGACGGTCATCAAGGACGCATAGCAAGTCCCGATTATCACAAGAAGAAGAAAATCGTTCTAGAACAAGGGATGCTGATTATGGGAAGAGGCGGAGGCTTACTTCTGAATAGTTGAATCATTCAGCATACATGCTTTAAACTTTATAGAGTATGGCTTTCCATGTTCATTTGGGTTCTCTCTTCGATGTTTTGGGCTCTTTGATTCATCATTACCTTTTTTGCCTATGCTGTTTATTGTCTGAACTCCGGCATATGTCTTCTACCTACAGGAGCGCAGTCTGATTTGGTGCAGAAAAAAAGTAAGCTCATACAATTCATTCTCTTTTACTAATTTTTCAAAATTAAATTCTGGTAGATTTGCAGGCTTTGTTTGGTACACTTGTGACGTTCTAACGTGTTTTAATATGGTCATGCTAATTGATGCACTTGTTCAAAACTTAGTCATGCTAATTGATGCACTTGTTCAAAACTTACTCTGTTGATGCTCTAATAAAATTTCTTCTTTCCTATATTTAAAAAAAAAGTGTTGCAGCGATGGTAGATTTTTGGTTCTTAGAATGAATATCATTGTTGATTTTATCACCATAGTTGTACCTTCTATTGTTTGGTATTATTTATCAACCTCATTTTTCAACACTAATTTTGTATTTCCATTTCATAATTGTAAAAGGTTAGCATTCGTTGATGCTATGCTAGATTAAGATACTAAAGATATGGACTCATCAACATCTACATTTTCTAAAATAATAGTAAAAAAATTAGGCATAGACATGATTAGGAACTTTGGACACTTCTATTAGATTTTTTTATTATATTTTTCATACATTTGAATGATTTTCACATTAAAATTTAAAAGTATGTTTTACTTCATGATATTTAGTTTTGAAATATTATGTGAAAGAAATGATGAAATATATGCCACACTTTATGAGGTTGGGAAAAGTCAAAGGGGGTGTTTGGATCAGTGAATTGAGTTATGAAGTCTAGAGTTAATATGTTGAAGCTAAGAAATTTGTGTGGGGTGCAAAGTTGTAAGATGAAGTTTCTCAATAAAGGTGCAAAATAGAAGAATAGAAGAAGATTGAGTTCCTCGATTAATGTGCAAACTTAGTTATTTAACACCAACTCATGAAATTGGTAGGCAAAAAAACCTCCCAAGAGGTGAACATAGATTTGTTCTGGAAAATTTGTCATGATTCTTATTTCTAATGTCATCTCTAAAAATGTAAAAGTTCTAGATTAGACTAATTAGTTTCTCCAACTCTAAGAAGATCTAGAGGGCCAATTTAGTTCGACTTGGATAGAAGGGAGCGTTCTCTAATTCTAGTAAGATCTAGAGGGCCAATTTGGTTTGACTTGGATAGAAGAGACCCTAGTGATGTTTGGGTGGGTCCTTATTAGGTTTCATGTTTCTCTTTGGGTCTTGACTTCAAAGTTTCTTTTTGTAACTATTTTATCATCACTATTTTGCTTGATTGGTCCCCTTTTCTTTTGAGGGGTCCCGTTTTTTGTAAGGTTGGTTTTTTTGTATTCTCTTATATTCTTTCAGTATTTCTCAGTGAAAGTATTTTGTTTAAAATAAATAATTAAAATAAAATAAAATAATCACCCGGCTACATTGTTCATGCTTCATAGGGTTCCATGCTCCTCCTTACCGTTTGAATTTTGTTCTCACTGGGTAACCTTGGTTGTATTATGTTTTTCCTTATGTACCTAAATAAAGAATGAGTTGCTCAATTCTTTTGTTTGAACTTATGTGCTTATTTTCATTTTCTGAGGCTCCATTCTTTCTCACTTTTATCTGTTCTGGGGATGAAGTTTCATTTCATCTAAACATAACATTTTGAGTTAATTCTATTTTAGATTTTCGATGTCAAATCTGTCTCATCTACTCTCAGTTGCCAATAATTATCTAGATAGATTTTTGTAGCTTTATGTTGATATACTAATTACCAATAGGAGAGCACGCCATTAACTTTGTTTCTGATTGGAAGTGCCTCTCGTTTTTTGTTTTTTTGTAGCTTAAAAGGATATTTGATAGTGAGGATTTCTTTCAGTGGAACAAAAGTTGGTTTGGGGACAGCAACGGGGGCTTTTAAATTCTCGTCTGCATAGAGAGAACCCATGCATGGCAATGCCTTCTCGCTCTATTAATTTGATAAAGAAACTTCTTGGTTAAAACTTCTCACGTTTCTTTTGAATGATGTTTCTTCTTGACTTCTTGGCACTTGATGATATTGATATTCTTGTTGTAATGGCTAAATATTGCTGGAGTCTTAGTCATGTCTGAATGTTTTCAGACATGTAATGGCTTACTATGTTGTTAGAGTATCTTAGCCTGGAGGATGTTGTATTGTGCGTTATTCTGTGTTATGAGCTGTTGTATCATATATTCACACCTCTTTCCATTCCTTCTTGTTTTCTTTGATACCACACCTTAGTCATTCTATTGTGAAGATGTAGAGCTAACCATTCTTTTAGAGCTGTTTCTTTACCCTTTAGAGGTTGTATGTACCTGTTACCAATTCACTAAATGTA
mRNA sequence
GGAGAAATTGCCAGGATTTCCACGCGCGATTTAAGATTAGGGTTTCTTTCTCTCTTCTCTCTCTTTTTTCAGCTGCTCTTCTTCCCTAATTGGGGATTCGATCTCCGAGTTTTAACTTCCTCTTCCTTACTTTGAAATTCGTTTCCTAACTGCTTCCATCGGCTTTCTGATTTTACCTGCATTCAATTTCTGAATTTGAATGAATCTCTAGAGGGGGTTGTTGAAGAAGGTAGAAATGGATGAAAGTGAGGGTGGGTTCGGTGAGGGTGTGGATCAGATTGATCAGTTTCATCGGAACGAGGCCATTTCAGCCGTTGCTGATGATGGTTTCTTGGGCGAAGATGAGGATGAATACGAGGACTTGTATAACGATGTTAATGTTGGGGAAGGGTTCCTTCAGTCGTTGAGGAAGAACGATGATTTGGGATTCAAAACCGAGGAGCCCAAGATGGAGCCTCCTGCACCTGCACCACCCAGTTCCGGTGCTTCCATACCTGGTGTTGGTGGAGGTGCGACTGAAGTTGCTGGTTTAGGAGATGGTGGGCACAGTGTTTCGGAGAGAGTAACCGAGGGTTACAATCAGATTCCAGATATAAGAGCGAATGAGATGGCTATCAGAGGTGGGGCGGGACCGGGGCCGCCTGTAGGCGGCGGAGGTGGGATTAGGGTTGAATTAGGGCAAGGGAGTAAAACCAATGAGTTGGAGGAGCGAAGCAATAATAACATAGCTGCGCATCAGGCTCCGCAGCAGCAACAGCCACAGCTGCAGGCGCAGCCACAGCCGCAACACCACCACCAACCACCTCAGAGCGGAGTCTTAGGAAATCCTGGGAGTGTAGAAAATGAAGGTTTGCTAAGGCAAGGAGGTGGAGTAAATGTAAATGGGGTTGGTGGAAATGGGTTCGGTAACATGGGGAGTGCAGGGGGAGGTGGTGGTGGAACGATTTTGTTTGTTGGTGATTTACATTGGTGGACTACAGATGCGGAGCTGGAGGCAGAACTCTGTAAGTATGGTCCGTTGAAGGAGGTCAAGTTTTATGACGAGAAAGCCAGTGGAAAATCAAAGGGCTATTGCCAGGTTGAGTTTTATGATCCTTCTGCTGCCACAGCTTGCAAGGAGGGAATGAATGGGCATATTTTTAATGGACGTCCATGTGTTGTTGCATATGCATCACCCTTTAGTGTTAAGAGGATGGGAGAAGCCCAAGTGAATAGGAACCAACAGATGTCCCAAGCTACTAATCCTCAAGCAAGGAGGGGTCCTAATGATGCTGTAGGTAAAATTGGTGGAAGTAACATTGCAACCGGTGGTAACTATCAAGGTGGTGATAACAATAGAGGTTCTGGGAGAGGTAATTGGGGAAGAGGTAATGCACATGGAATGGGAGGTCGAGGACCAGCTGGTCCAATGAGGAGTAGGGGTGGTGGGATGGGTGGCAGAGGTATAATGGGAAATGGTGGAAACGGATTTGGACAAGGAATTGGTGCTGCCCCTCCTTTATTACATCCGCAATCAATGATGGCCCAAGGTTTTGATCCATCTTTTGGTGCACCTATGGGAAGAATGGGCACATATGGTGGTTTTCCTGGAGCTCCGGCTCCCCCTTTCTCTGGAATTTTATCGTCCTTTCCTCCTGTTGGGGGTGTTGGCCTTCCTGGTGTAGCTCCTCATGTGAACCCAGCATTTTTTGGAAGGGGTATGCCTATGAATGGAATGGGCATGATGCCAACATCGGGTGTTGATGGACCTAATATGGGAATGTGGTCTGATCCTAGTATGGGTGGATGGGGCAGTGAAGAACATGGTGGTGGGAGAGCTGACGAGTCTAGTTATGGAGAAGAAGCTGGTTCTGACCAGCAATATGGTGAAGGCAGTCATGACAGAGGGGCATGGGCAAATTCAACAAAGGAGAAAGATAGAGGCTCCGAAAGGGACTGGTCACAGTCTTCTGATAGAAGGTATCGAGATGATAGAGATGTTGGATATGATAGAGAGAGATCCAAAGAAAAAGATCCGGGGCCTGACCATGATTGGCCAGATAGGAGGCCACGTGATGATAGAGATATAGGGCGTGAAAGGGATAAAGATAGGGACCGAGATAGGGATAGAGAACGATCTCGAGATTATGAGCGTGGTCATCATGACCGTGATCGTGAACGTGACAGAGATCGTGACCGTGATAGGTACAAGGAAGATAGGGATAGATATTCTGATCATCATAGGTACAGAGACCGGGAACCAGAGCATGAGGAGGATTGGGAAAGGGGACGGTCATCAAGGACGCATAGCAAGTCCCGATTATCACAAGAAGAAGAAAATCGTTCTAGAACAAGGGATGCTGATTATGGGAAGAGGCGGAGGCTTACTTCTGAATAGTTGAATCATTCAGCATACATGCTTTAAACTTTATAGAGAGCGCAGTCTGATTTGGTGCAGAAAAAAACTTAAAAGGATATTTGATAGTGAGGATTTCTTTCAGTGGAACAAAAGTTGGTTTGGGGACAGCAACGGGGGCTTTTAAATTCTCGTCTGCATAGAGAGAACCCATGCATGGCAATGCCTTCTCGCTCTATTAATTTGATAAAGAAACTTCTTGGTTAAAACTTCTCACGTTTCTTTTGAATGATGTTTCTTCTTGACTTCTTGGCACTTGATGATATTGATATTCTTGTTGTAATGGCTAAATATTGCTGGAGTCTTAGTCATGTCTGAATGTTTTCAGACATGTAATGGCTTACTATGTTGTTAGAGTATCTTAGCCTGGAGGATGTTGTATTGTGCGTTATTCTGTGTTATGAGCTGTTGTATCATATATTCACACCTCTTTCCATTCCTTCTTGTTTTCTTTGATACCACACCTTAGTCATTCTATTGTGAAGATGTAGAGCTAACCATTCTTTTAGAGCTGTTTCTTTACCCTTTAGAGGTTGTATGTACCTGTTACCAATTCACTAAATGTA
Coding sequence (CDS)
ATGGATGAAAGTGAGGGTGGGTTCGGTGAGGGTGTGGATCAGATTGATCAGTTTCATCGGAACGAGGCCATTTCAGCCGTTGCTGATGATGGTTTCTTGGGCGAAGATGAGGATGAATACGAGGACTTGTATAACGATGTTAATGTTGGGGAAGGGTTCCTTCAGTCGTTGAGGAAGAACGATGATTTGGGATTCAAAACCGAGGAGCCCAAGATGGAGCCTCCTGCACCTGCACCACCCAGTTCCGGTGCTTCCATACCTGGTGTTGGTGGAGGTGCGACTGAAGTTGCTGGTTTAGGAGATGGTGGGCACAGTGTTTCGGAGAGAGTAACCGAGGGTTACAATCAGATTCCAGATATAAGAGCGAATGAGATGGCTATCAGAGGTGGGGCGGGACCGGGGCCGCCTGTAGGCGGCGGAGGTGGGATTAGGGTTGAATTAGGGCAAGGGAGTAAAACCAATGAGTTGGAGGAGCGAAGCAATAATAACATAGCTGCGCATCAGGCTCCGCAGCAGCAACAGCCACAGCTGCAGGCGCAGCCACAGCCGCAACACCACCACCAACCACCTCAGAGCGGAGTCTTAGGAAATCCTGGGAGTGTAGAAAATGAAGGTTTGCTAAGGCAAGGAGGTGGAGTAAATGTAAATGGGGTTGGTGGAAATGGGTTCGGTAACATGGGGAGTGCAGGGGGAGGTGGTGGTGGAACGATTTTGTTTGTTGGTGATTTACATTGGTGGACTACAGATGCGGAGCTGGAGGCAGAACTCTGTAAGTATGGTCCGTTGAAGGAGGTCAAGTTTTATGACGAGAAAGCCAGTGGAAAATCAAAGGGCTATTGCCAGGTTGAGTTTTATGATCCTTCTGCTGCCACAGCTTGCAAGGAGGGAATGAATGGGCATATTTTTAATGGACGTCCATGTGTTGTTGCATATGCATCACCCTTTAGTGTTAAGAGGATGGGAGAAGCCCAAGTGAATAGGAACCAACAGATGTCCCAAGCTACTAATCCTCAAGCAAGGAGGGGTCCTAATGATGCTGTAGGTAAAATTGGTGGAAGTAACATTGCAACCGGTGGTAACTATCAAGGTGGTGATAACAATAGAGGTTCTGGGAGAGGTAATTGGGGAAGAGGTAATGCACATGGAATGGGAGGTCGAGGACCAGCTGGTCCAATGAGGAGTAGGGGTGGTGGGATGGGTGGCAGAGGTATAATGGGAAATGGTGGAAACGGATTTGGACAAGGAATTGGTGCTGCCCCTCCTTTATTACATCCGCAATCAATGATGGCCCAAGGTTTTGATCCATCTTTTGGTGCACCTATGGGAAGAATGGGCACATATGGTGGTTTTCCTGGAGCTCCGGCTCCCCCTTTCTCTGGAATTTTATCGTCCTTTCCTCCTGTTGGGGGTGTTGGCCTTCCTGGTGTAGCTCCTCATGTGAACCCAGCATTTTTTGGAAGGGGTATGCCTATGAATGGAATGGGCATGATGCCAACATCGGGTGTTGATGGACCTAATATGGGAATGTGGTCTGATCCTAGTATGGGTGGATGGGGCAGTGAAGAACATGGTGGTGGGAGAGCTGACGAGTCTAGTTATGGAGAAGAAGCTGGTTCTGACCAGCAATATGGTGAAGGCAGTCATGACAGAGGGGCATGGGCAAATTCAACAAAGGAGAAAGATAGAGGCTCCGAAAGGGACTGGTCACAGTCTTCTGATAGAAGGTATCGAGATGATAGAGATGTTGGATATGATAGAGAGAGATCCAAAGAAAAAGATCCGGGGCCTGACCATGATTGGCCAGATAGGAGGCCACGTGATGATAGAGATATAGGGCGTGAAAGGGATAAAGATAGGGACCGAGATAGGGATAGAGAACGATCTCGAGATTATGAGCGTGGTCATCATGACCGTGATCGTGAACGTGACAGAGATCGTGACCGTGATAGGTACAAGGAAGATAGGGATAGATATTCTGATCATCATAGGTACAGAGACCGGGAACCAGAGCATGAGGAGGATTGGGAAAGGGGACGGTCATCAAGGACGCATAGCAAGTCCCGATTATCACAAGAAGAAGAAAATCGTTCTAGAACAAGGGATGCTGATTATGGGAAGAGGCGGAGGCTTACTTCTGAATAG
Protein sequence
MDESEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKTEEPKMEPPAPAPPSSGASIPGVGGGATEVAGLGDGGHSVSERVTEGYNQIPDIRANEMAIRGGAGPGPPVGGGGGIRVELGQGSKTNELEERSNNNIAAHQAPQQQQPQLQAQPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTILFVGDLHWWTTDAELEAELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQATNPQARRGPNDAVGKIGGSNIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGAAPPLLHPQSMMAQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRADESSYGEEAGSDQQYGEGSHDRGAWANSTKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSRLSQEEENRSRTRDADYGKRRRLTSE
Homology
BLAST of Bhi09G001475 vs. TAIR 10
Match:
AT5G55670.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 666.8 bits (1719), Expect = 2.0e-191
Identity = 431/737 (58.48%), Postives = 516/737 (70.01%), Query Frame = 0
Query: 9 GEGVDQIDQFHRNEAISAVADDGFLGEDE-DEYEDLYNDVNVGEGFLQSLRKNDDLGFKT 68
G+G DQ+DQFH+NEAISAVADDGF+ E+E D+YEDLYNDVNVGEGFLQS++KND+ G +
Sbjct: 4 GDGRDQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSMKKNDEAGSRN 63
Query: 69 EEPK---MEPPAPAPPSSG-----ASIPGVGGGATE-----VAGLGDGGHSVSERVTEGY 128
EE + ME P G SIPG+ G + E +G G G V
Sbjct: 64 EEKEKVNMEEEDRVEPVLGEAEVSISIPGLVGESVEKEAEAESGGGGSGSGTDVVVASSG 123
Query: 129 NQIPDIRANEMA--IRGGAGPGPPVGGGGGIRVELGQGS-KTNELEERSNNNIAAHQAPQ 188
+++ ++++ I GG G G GGG+RVELGQ S + N+LE NNI+ P
Sbjct: 124 YGAQEVKVSDVSQEIPGGIG----TGTGGGLRVELGQASNRANDLEAPRGNNISQGLLP- 183
Query: 189 QQQPQLQAQPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGN----GFGNMG 248
P +++ V+GN G + G G N+ G G N G G
Sbjct: 184 --------PPPVLGNNENLMRPVMGNV-----NGGIPPGPGSNMVGNGANIAMPGVVGGG 243
Query: 249 SAGGGGGGTILFVGDLHWWTTDAELEAELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDP 308
+ GGGGGG LFVGDLHWWTTDAELEAELCKYG +KEVKF+DEKASGKSKGYCQVEFYDP
Sbjct: 244 TGGGGGGGAFLFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGYCQVEFYDP 303
Query: 309 SAATACKEGMNGHIFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQATNPQARRGPNDAV 368
AA+ACK+ +NG+ FNGRPCVV YASP+SVKRMGEAQVNR QQ R GP D
Sbjct: 304 VAASACKDALNGYPFNGRPCVVEYASPYSVKRMGEAQVNRTQQAQSVIAQAKRGGPADPP 363
Query: 369 GK-------IGGSNIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMG 428
K +N A GGN+QGG+ NRG GRGNWGRGNA GMGGRGP GPMR+R GMG
Sbjct: 364 SKPLVANNNNNNNNNAIGGNFQGGE-NRGFGRGNWGRGNAQGMGGRGPGGPMRNRPNGMG 423
Query: 429 GRGIMGNGGNGFGQGIGAAPPL-LHPQSMMAQGFDPSFGAPMGRMGTYGGFPGAPAPPFS 488
GRG+MGNG GFGQG+G PP+ + Q MM QGF+ +FG PM RMG YGGFPGAP P F
Sbjct: 424 GRGLMGNG--GFGQGMGTGPPMNMMHQPMMGQGFEQAFGGPMARMGGYGGFPGAPGPQFP 483
Query: 489 GILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVD-GPNMGMWSDPSMGGW 548
G+LSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMP +GVD G NMGMW DP+ GGW
Sbjct: 484 GLLSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPNAGVDGGHNMGMW-DPNSGGW 543
Query: 549 GS-EEHGGGRADESSYGEEAGSDQQYGEGSHDRGAWANSTKEKDRGSERDWSQSSDRRYR 608
G+ E+ G GRA ESSYGEEA SD QYGE +H+RGA N KEK+R SER+WS SSDRR R
Sbjct: 544 GAGEDLGSGRAAESSYGEEAASDHQYGEVNHERGARPNPVKEKERASEREWSGSSDRRNR 603
Query: 609 DDRDVGYDRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHD 668
+D+D GY+R+ +EKD G +D P+RR RDDRD GRER+++ +DRERSR+ H
Sbjct: 604 EDKDAGYERDIPREKDVGHGYDMPERRHRDDRDTGREREREH-HHKDRERSRE-----HV 663
Query: 669 RDRERDRDRDRDRYKEDRDRYSDHHRYRDR-EPEHEEDWERGRSSRTHSKSRLSQEEENR 714
RDRE R+R+RDR++E+R+RY HR R R EPEH+E+W RGRSSR H+KSRLS+E+ +R
Sbjct: 664 RDRE--RERERDRHREERERYGGDHRTRHRDEPEHDEEWNRGRSSRGHNKSRLSREDNHR 710
BLAST of Bhi09G001475 vs. TAIR 10
Match:
AT5G55670.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 446.4 bits (1147), Expect = 4.2e-125
Identity = 338/734 (46.05%), Postives = 412/734 (56.13%), Query Frame = 0
Query: 9 GEGVDQIDQFHRNEAISAVADDGFLGEDE-DEYEDLYNDVNVGEGFLQSLRKNDDLGFKT 68
G+G DQ+DQFH+NEAISAVADDGF+ E+E D+YEDLYNDVNVGEGFLQS++KND+ G +
Sbjct: 4 GDGRDQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSMKKNDEAGSRN 63
Query: 69 EEPK---MEPPAPAPPSSG-----ASIPGVGGGATE-----VAGLGDGGHSVSERVTEGY 128
EE + ME P G SIPG+ G + E +G G G V
Sbjct: 64 EEKEKVNMEEEDRVEPVLGEAEVSISIPGLVGESVEKEAEAESGGGGSGSGTDVVVASSG 123
Query: 129 NQIPDIRANEMA--IRGGAGPGPPVGGGGGIRVELGQGS-KTNELEERSNNNIAAHQAPQ 188
+++ ++++ I GG G G GGG+RVELGQ S + N+LE NNI+ P
Sbjct: 124 YGAQEVKVSDVSQEIPGGIG----TGTGGGLRVELGQASNRANDLEAPRGNNISQGLLP- 183
Query: 189 QQQPQLQAQPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGN----GFGNMG 248
P +++ V+GN G + G G N+ G G N G G
Sbjct: 184 --------PPPVLGNNENLMRPVMGNV-----NGGIPPGPGSNMVGNGANIAMPGVVGGG 243
Query: 249 SAGGGGGGTILFVGDLHWWTTDAELEAELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDP 308
+ GGGGGG LFVGDLHWWTTDAELEAELCKYG +KEVKF+DEKASGKSKGYCQVEFYDP
Sbjct: 244 TGGGGGGGAFLFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGYCQVEFYDP 303
Query: 309 SAATACKEGMNGHIFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQATNPQARRGPNDAV 368
AA+ACK+ +NG+ FNGRPCVV YASP+SVKRMGEAQVNR QQ R GP D
Sbjct: 304 VAASACKDALNGYPFNGRPCVVEYASPYSVKRMGEAQVNRTQQAQSVIAQAKRGGPADPP 363
Query: 369 GK-------IGGSNIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMG 428
K +N A GGN+QGG+ NRG GRGNWGRGNA GMGGRGP GPMR+R GM
Sbjct: 364 SKPLVANNNNNNNNNAIGGNFQGGE-NRGFGRGNWGRGNAQGMGGRGPGGPMRNRPNGM- 423
Query: 429 GRGIMGNGGNGFGQGIGAAPPLLHPQSMMAQGFDPSFGAPMGRMGTYGGFPGAPAPPFSG 488
Sbjct: 424 ------------------------------------------------------------ 483
Query: 489 ILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGS 548
Sbjct: 484 ------------------------------------------------------------ 543
Query: 549 EEHGGGRADESSYGEEAGSDQQYGEGSHDRGAWANSTKEKDRGSERDWSQSSDRRYRDDR 608
GGRA ESSYGEEA SD QYGE +H+RGA N KEK+R SER+WS SSDRR R+D+
Sbjct: 544 ----GGRAAESSYGEEAASDHQYGEVNHERGARPNPVKEKERASEREWSGSSDRRNREDK 585
Query: 609 DVGYDRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDR 668
D GY+R+ +EKD G +D P+RR RDDRD GRER+++ +DRERSR+ H RDR
Sbjct: 604 DAGYERDIPREKDVGHGYDMPERRHRDDRDTGREREREH-HHKDRERSRE-----HVRDR 585
Query: 669 ERDRDRDRDRYKEDRDRYSDHHRYRDR-EPEHEEDWERGRSSRTHSKSRLSQEEENRSRT 714
E R+R+RDR++E+R+RY HR R R EPEH+E+W RGRSSR H+KSRLS+E+ +RS++
Sbjct: 664 E--RERERDRHREERERYGGDHRTRHRDEPEHDEEWNRGRSSRGHNKSRLSREDNHRSKS 585
BLAST of Bhi09G001475 vs. TAIR 10
Match:
AT1G13190.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 228.0 bits (580), Expect = 2.4e-59
Identity = 256/722 (35.46%), Postives = 351/722 (48.61%), Query Frame = 0
Query: 24 ISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKTEEPKMEPPAPAPPSSG 83
I A+AD+ +G D+DEY+DLY+DVNVGE F Q+ + +PPA S+
Sbjct: 21 IPALADEELMG-DDDEYDDLYSDVNVGESFFQA------------HNQPQPPAQVNTSNA 80
Query: 84 ---------ASIPGVG---GGATEVAGLGDGGH---SVSERVTEGYNQIP---------D 143
A+ P +G GG E DGGH S + ++ Y Q D
Sbjct: 81 SLQAQNSHVAAEPRMGIVSGGTVEGKYRNDGGHNGISGPDTRSDVYPQASSFGAKGLNID 140
Query: 144 IRANEMAIRGGAGPGPPVGGGGGIRVELGQGSKTNELEERSNNNIAAHQAPQQQQP--QL 203
I++N++A +G V G G+ N E +N+ A QQ P Q+
Sbjct: 141 IQSNKIAQQGST---TVVLNNHGF-----SGNAVNVPEMPVHNSYGAPPQGAQQIPVSQM 200
Query: 204 QAQPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTI 263
P + P QS V+ N G T+
Sbjct: 201 SVNPNVMMNKSPTQSFVVDN------------------------------------GNTM 260
Query: 264 LFVGDLHWWTTDAELEAELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGM 323
LFVG+LHWWTTDAE+E+ L +YG +KE+KF+DE+ SGKSKGYCQVEFYD +AA ACKEGM
Sbjct: 261 LFVGELHWWTTDAEIESVLSQYGRVKEIKFFDERVSGKSKGYCQVEFYDSAAAAACKEGM 320
Query: 324 NGHIFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQATNPQARRGPNDAVGKIGGSNIAT 383
NG IFNG+ CVVA+ASP ++K+MG RNQ +Q N RR N+ +G+ G+N
Sbjct: 321 NGFIFNGKACVVAFASPETLKQMGANFTGRNQGQNQIQN---RRPLNEGMGR--GNNNNN 380
Query: 384 GGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGI----MGNGGNGFG 443
N Q GD R GRG + RG GMG RG A GG M GRG+ G+G +G
Sbjct: 381 NMNTQNGDGGRNYGRGGFARG-GQGMGNRGGAW-----GGAMRGRGVNNMASGSGAGPYG 440
Query: 444 QGIG--AAPPLLHPQSMM-AQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGG 503
G+ A ++HPQ MM A GFDP+F MGR YGG+ G P G+ S+P V
Sbjct: 441 PGLAGPAFGGMMHPQGMMGAGGFDPTF---MGRGAGYGGYSGIAYP---GMPHSYPGVNA 500
Query: 504 VGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPN-MGMWSDPSMGGWGSEEHGGGRAD 563
+G+ G+APHVNPAFFG GMG M +SG++G + MW SE +GGG
Sbjct: 501 MGMVGIAPHVNPAFFG-----TGMGTMGSSGMNGVHAAAMW---------SEANGGG--- 560
Query: 564 ESSYGEEAGSDQQYGEGSHDRGAWANSTKEKDRGSERDWSQSSDRRYRDDRDVGYDRERS 623
GEE GS +YG GY+
Sbjct: 561 ----GEEGGS--EYG--------------------------------------GYE---- 571
Query: 624 KEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRD-RERDRDRDR 683
D ++++ + SRD ER +RD E DR
Sbjct: 621 ----------------------------DETQEKEEKPSRDKERATTERDWSENSGDRRH 571
Query: 684 DRYKEDRDRYSDHHRYRDREPEHEEDWERGRSS-RTHSKSRLSQEEENRSRTRDADYGKR 710
++E++D + ++ + RDR+ ++++RG+SS ++ S+SR+S E+++RSR+RDADYGKR
Sbjct: 681 KSHREEKDSHREYKQQRDRD---SDEFDRGQSSLKSRSRSRMS-EDDHRSRSRDADYGKR 571
BLAST of Bhi09G001475 vs. TAIR 10
Match:
AT1G60900.1 (U2 snRNP auxilliary factor, large subunit, splicing factor )
HSP 1 Score: 43.9 bits (102), Expect = 6.3e-04
Identity = 57/152 (37.50%), Postives = 75/152 (49.34%), Query Frame = 0
Query: 558 KEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDWPDRRPRDDRDIGRERDK 617
K+ + SE+D D+ DRD DR+R K +D R+R+K
Sbjct: 44 KDSSKISEKDNENGRDKDGNKDRDREKDRDREKSRD-------------------RDREK 103
Query: 618 DRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHH-RYRDREPEHEEDWE 677
RDRDRDRERS+D +R H RDR RDR R+R ++D D DHH R RDR+ D +
Sbjct: 104 SRDRDRDRERSKDRQRDRHHRDRHRDRSRERSEKRDDLD--DDHHRRSRDRDRRRSRDRD 163
Query: 678 RGRSSRTHSKSRLSQEEENRSRTRDADYGKRR 709
R R S+SR E RSR+ + R
Sbjct: 164 REVRHRRRSRSRSRSRSERRSRSEHRHKSEHR 174
BLAST of Bhi09G001475 vs. ExPASy TrEMBL
Match:
A0A5D3CC60 (Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00770 PE=4 SV=1)
HSP 1 Score: 1266.1 bits (3275), Expect = 0.0e+00
Identity = 666/717 (92.89%), Postives = 688/717 (95.96%), Query Frame = 0
Query: 1 MDESEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
MDE EGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1 MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
Query: 61 DDLGFK-TEEPKMEPPAPAPPSSGASIPGVGGGATEVAGLGD-GGHSVSERVTEGYNQIP 120
D LGFK EEPKMEPPAP PP+SGASIPG+GGGATEV GLGD GGH+VSERVTEGYNQIP
Sbjct: 61 DGLGFKREEEPKMEPPAPVPPTSGASIPGIGGGATEVTGLGDAGGHTVSERVTEGYNQIP 120
Query: 121 DIRANEMAIRGGAGPGPPVGGGGGIRVELGQGSKTNELEERSNNNIAAHQAPQQQQPQLQ 180
D+R NEMAIRGGAG GPPVGGG GIRVELGQGSK ELEERS+NN+A HQAP QQPQLQ
Sbjct: 121 DLRTNEMAIRGGAGSGPPVGGGVGIRVELGQGSKPIELEERSSNNVAGHQAP--QQPQLQ 180
Query: 181 AQPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTIL 240
QPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGN+GSAGGG GGT+L
Sbjct: 181 PQPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNVGSAGGGSGGTVL 240
Query: 241 FVGDLHWWTTDAELEAELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMN 300
FVGDLHWWTTDAELE ELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMN
Sbjct: 241 FVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMN 300
Query: 301 GHIFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQATNPQARRGPNDAVGKIGGSNIATG 360
GHIFNGRPCVVAYASPFSVK+MGEAQVNRNQQ++QATNPQARR PNDAVGKIGGS+IATG
Sbjct: 301 GHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATG 360
Query: 361 GNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGA 420
GNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMR RGGG+GGRGIMGNGGNGFGQGIGA
Sbjct: 361 GNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGA 420
Query: 421 APPLLHPQSMMAQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAP 480
PPLLHPQSMM QGFDPSFGAP+GRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAP
Sbjct: 421 TPPLLHPQSMMGQGFDPSFGAPIGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAP 480
Query: 481 HVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRADESSYGEEAG 540
HVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE GGGRA ESSYGEEAG
Sbjct: 481 HVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAG 540
Query: 541 SDQQYGEGSHDRGAWANSTKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDH 600
SDQ YGEGSH+RG WANS KEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDH
Sbjct: 541 SDQHYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDH 600
Query: 601 DWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRY 660
DWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHH+RDRER+RDRDRDRYK+DR+RY
Sbjct: 601 DWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHERDRERERDRDRDRYKDDRERY 660
Query: 661 SDHHRYRDREPEHEEDWERGRSSRT--HSKSRLSQEEENRSRTRDADYGKRRRLTSE 714
SDHHRYRDREPEH+EDWERGRSSRT HSKSRLSQEEE+RSR+RDADYGKRRRLTSE
Sbjct: 661 SDHHRYRDREPEHDEDWERGRSSRTHSHSKSRLSQEEESRSRSRDADYGKRRRLTSE 715
BLAST of Bhi09G001475 vs. ExPASy TrEMBL
Match:
A0A0A0K3G6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G104800 PE=4 SV=1)
HSP 1 Score: 1250.0 bits (3233), Expect = 0.0e+00
Identity = 658/715 (92.03%), Postives = 681/715 (95.24%), Query Frame = 0
Query: 1 MDESEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
MDE EGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRK+
Sbjct: 1 MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKS 60
Query: 61 DDLGFK-TEEPKMEPPAPAPPSSGASIPGVGGGATEVAGLGD-GGHSVSERVTEGYNQIP 120
DDLGFK EEPKMEPPAP PPSS ASIPG+GGGATEV GLGD GG +VSERVTEGYNQIP
Sbjct: 61 DDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGLGDAGGRTVSERVTEGYNQIP 120
Query: 121 DIRANEMAIRGGAGPGPPVGGGGGIRVELGQGSKTNELEERSNNNIAAHQAPQQQQPQLQ 180
D+R NEMAIRGG G GPPVG G GIRVELGQGSK ELEERS+NN+A HQAP Q QP Q
Sbjct: 121 DLRTNEMAIRGGVGSGPPVGTGVGIRVELGQGSKAIELEERSSNNVAGHQAPPQPQP--Q 180
Query: 181 AQPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGGGTIL 240
QPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGN+GSAGGGGGGTIL
Sbjct: 181 PQPQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNIGSAGGGGGGTIL 240
Query: 241 FVGDLHWWTTDAELEAELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMN 300
FVGDLHWWTTDAELE ELCKYGPLKEVKFYDEKASGKSKGYCQVEFYD SAATACKEGMN
Sbjct: 241 FVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDSSAATACKEGMN 300
Query: 301 GHIFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQATNPQARRGPNDAVGKIGGSNIATG 360
GHIFNGRPCVVAYASPFSVK+MGEAQV+RNQQ++QATNPQARR PN+AVGKIGG++IATG
Sbjct: 301 GHIFNGRPCVVAYASPFSVKKMGEAQVSRNQQIAQATNPQARRAPNEAVGKIGGNSIATG 360
Query: 361 GNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQGIGA 420
GNYQGGDNNRGSGRGNWGR NAHGMGGRGPAG MR RGGGMGGRGIMGNGGNGFGQGIGA
Sbjct: 361 GNYQGGDNNRGSGRGNWGRSNAHGMGGRGPAGQMRGRGGGMGGRGIMGNGGNGFGQGIGA 420
Query: 421 APPLLHPQSMMAQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAP 480
PPLLHPQSMM QGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAP
Sbjct: 421 TPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAP 480
Query: 481 HVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRADESSYGEEAG 540
HVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE GGGRA ESSYGEEAG
Sbjct: 481 HVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAG 540
Query: 541 SDQQYGEGSHDRGAWANSTKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDH 600
SDQ YGEGSH+RG WANS KEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDH
Sbjct: 541 SDQHYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDH 600
Query: 601 DWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRY 660
DWPDRRPR+DRDIGRERDKDRDR+RDRERSRDYERGHH+RDRER+RDRDRDRYK+DRD+Y
Sbjct: 601 DWPDRRPREDRDIGRERDKDRDRERDRERSRDYERGHHERDRERERDRDRDRYKDDRDKY 660
Query: 661 SDHHRYRDREPEHEEDWERGRSSRTHSKSRLSQEEENRSRTRDADYGKRRRLTSE 714
SDHHRYRDREPEH+EDWERGRSSRTHSKSRLSQEEENRSR+RDADYGKRRRLTSE
Sbjct: 661 SDHHRYRDREPEHDEDWERGRSSRTHSKSRLSQEEENRSRSRDADYGKRRRLTSE 713
BLAST of Bhi09G001475 vs. ExPASy TrEMBL
Match:
A0A6J1ILS2 (cleavage and polyadenylation specificity factor subunit 6-like OS=Cucurbita maxima OX=3661 GN=LOC111476425 PE=4 SV=1)
HSP 1 Score: 1245.0 bits (3220), Expect = 0.0e+00
Identity = 663/728 (91.07%), Postives = 683/728 (93.82%), Query Frame = 0
Query: 1 MDESEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
MDE EGG G G DQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1 MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
Query: 61 DDLGFKT-EEPKMEPPAPAPPSSGASIPGVGGGATEVAGLGDGGHSVSERVTEGYNQIPD 120
DDLGFK+ EEPKMEPPA PP+SGASIPG GGG T+V GLGDGGHSV+ERVTEGYNQIPD
Sbjct: 61 DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIPD 120
Query: 121 IRANEMAIRGGAGPGPPVGGGGGIRVELGQGSKTNELEERSNNNIAAHQAPQQQQPQLQ- 180
+RANEMAIR GAG GPP+GGGGGIRVELGQGSKTNELEERS+NN+AAHQAPQQQQPQ Q
Sbjct: 121 LRANEMAIRVGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPQQQQPQPQQ 180
Query: 181 -----AQPQP----QHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNMGSA 240
AQPQP QHHHQ Q GVLGNP SVENEGLLRQGGGVNVNGVGGNGFGN+GSA
Sbjct: 181 QLQPPAQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVGSA 240
Query: 241 ----GGGGGGTILFVGDLHWWTTDAELEAELCKYGPLKEVKFYDEKASGKSKGYCQVEFY 300
GGGGGGTILFVGDLHWWTTDAELE ELCKYGPLKEVKF+DEKASGKSKGYCQVEFY
Sbjct: 241 GGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFY 300
Query: 301 DPSAATACKEGMNGHIFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQATNPQARRGPND 360
DPSAATACKEGMNGH+FNGRPCVVAYASPFSVKRMGEAQVNRNQQM+QATNPQARRGPND
Sbjct: 301 DPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGPND 360
Query: 361 AVGKIGGSNIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIM 420
VGK+GGS+IATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMR+RGGGMGGRGIM
Sbjct: 361 TVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIM 420
Query: 421 GNGGNGFGQGIGAAPPLLHPQSMMAQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSF 480
GNGGNGFGQG+GA PPLLHPQSMM QGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSF
Sbjct: 421 GNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSF 480
Query: 481 PPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGG 540
PPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGG
Sbjct: 481 PPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGG 540
Query: 541 GRADESSYGEEAGSDQQYGEGSHDRGAWANSTKEKDRGSERDWSQSSDRRYRDDRDVGYD 600
GRA ESSYGEEAGSDQQYGEGSH+RGAWANS KEKDRGSERDWSQSSDRRYRD D
Sbjct: 541 GRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD------D 600
Query: 601 RERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRD 660
RERSKEKD GPDHDWPDRRPRDDRDIGRERDKDRDRDRD+ERSRDYERGHHDRDR+RDRD
Sbjct: 601 RERSKEKDLGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRDRD 660
Query: 661 RDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSRLSQEEENRSRTRDADYG 714
RDRDRYKEDRDRYSDHHRYRDREPEH+EDWERGRSSRTHSKSRL QEEENRSRTRDADYG
Sbjct: 661 RDRDRYKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDADYG 720
BLAST of Bhi09G001475 vs. ExPASy TrEMBL
Match:
A0A6J1F726 (cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita moschata OX=3662 GN=LOC111442737 PE=4 SV=1)
HSP 1 Score: 1241.1 bits (3210), Expect = 0.0e+00
Identity = 660/730 (90.41%), Postives = 681/730 (93.29%), Query Frame = 0
Query: 1 MDESEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
MDE EGG G G DQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1 MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
Query: 61 DDLGFKT-EEPKMEPPAPAPPSSGASIPGVGGGATEVAGLGDGGHSVSERVTEGYNQIPD 120
DDLGFK+ EEPKMEPPA PP+SGASIPG GGG T+V GLGDGGHSV+ERVTEGYNQIPD
Sbjct: 61 DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIPD 120
Query: 121 IRANEMAIRGGAGPGPPVGGGGGIRVELGQGSKTNELEERSNNNIAAHQAPQQQQPQ--- 180
+R NEMAIR GAG GPP+GGGGGIRVELGQGSKTNELEERS+NN+AAHQAP QQQPQ
Sbjct: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPQPLQ 180
Query: 181 -----LQAQPQP----QHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNMG 240
Q QPQP QHHHQ Q GVLGNP SVENEGLLRQGGGVNVNGVGGNGFGN+G
Sbjct: 181 QLQPPAQPQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240
Query: 241 SA----GGGGGGTILFVGDLHWWTTDAELEAELCKYGPLKEVKFYDEKASGKSKGYCQVE 300
+A GGGGGGTILFVGDLHWWTTDAELE ELCKYGPLKEVKF+DEKASGKSKGYCQVE
Sbjct: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300
Query: 301 FYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQATNPQARRGP 360
FYDPSAATACKEGMNGH+FNGRPCVVAYASPFSVKRMGEAQVNRNQQM+QATNPQARRGP
Sbjct: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360
Query: 361 NDAVGKIGGSNIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRG 420
ND VGK+GGS+IATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMR+RGGGMGGRG
Sbjct: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420
Query: 421 IMGNGGNGFGQGIGAAPPLLHPQSMMAQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480
IMGNGGNGFGQG+GA PPLLHPQSMM QGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS
Sbjct: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480
Query: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540
SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH
Sbjct: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540
Query: 541 GGGRADESSYGEEAGSDQQYGEGSHDRGAWANSTKEKDRGSERDWSQSSDRRYRDDRDVG 600
GGGRA ESSYGEEAGSDQQYGEGSH+RGAWANS KEKDRGSERDWSQSSDRRYRD
Sbjct: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD----- 600
Query: 601 YDRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERD 660
DRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRD+ERSRDYERGHHDRDR+RD
Sbjct: 601 -DRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRD 660
Query: 661 RDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSRLSQEEENRSRTRDAD 714
RDRDRDRYKEDRDRYSDHHRYRDREPEH+EDWERGRSSRTHSKSRL QEEENRSRTRDAD
Sbjct: 661 RDRDRDRYKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDAD 720
BLAST of Bhi09G001475 vs. ExPASy TrEMBL
Match:
A0A6J1CCR1 (cleavage and polyadenylation specificity factor subunit 6 OS=Momordica charantia OX=3673 GN=LOC111010455 PE=4 SV=1)
HSP 1 Score: 1211.4 bits (3133), Expect = 0.0e+00
Identity = 646/719 (89.85%), Postives = 671/719 (93.32%), Query Frame = 0
Query: 1 MDESEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
MDE EGGFGEGVDQIDQFHRNEAISAVAD+GFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1 MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
Query: 61 DDLGFKTEE--PKMEPPAPAPPSSGASIPGVGGGATEVAGLGDGGHSVSERVTEGYNQIP 120
DDLGF+ EE PK+EPPA PSSGASIPGVGGGATEVA LGDGGHSV ERVTEGYNQIP
Sbjct: 61 DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP 120
Query: 121 DIRANEMAIRGGAGPGPPVGGGGGIRVELGQGSKTNELEERSNNNIAAHQAPQQQQPQLQ 180
D+R NEMA+RGGAG GPP+GGGGGIRVELGQGSKTNELEERS+NN+A HQAPQQ QPQ Q
Sbjct: 121 DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQ 180
Query: 181 AQPQ----PQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNMGSAGGGGG 240
Q Q QHHHQP SGVLGNPGSVEN+GLLRQ GGVNVNGVGGNG+GNMGSAGGGGG
Sbjct: 181 QQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQ-GGVNVNGVGGNGYGNMGSAGGGGG 240
Query: 241 GTILFVGDLHWWTTDAELEAELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACK 300
GTILFVGDLHWWTTDAELE ELCKYGPLKEVKF+DEKASGKSKGYCQVEFYDPSAATACK
Sbjct: 241 GTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAATACK 300
Query: 301 EGMNGHIFNGRPCVVAYASPFSVKRMGEAQVNRNQQMSQATNPQARRGPNDAVGKIGGSN 360
EGMNGH+FNGRPCVVA+ASPFSVK+MGEAQVNRNQQ++QA NPQARRGPNDAVGKIGGSN
Sbjct: 301 EGMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAVGKIGGSN 360
Query: 361 IATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRSRGGGMGGRGIMGNGGNGFGQ 420
I TGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMR+RGGGMGGRGIMGNGGNGFGQ
Sbjct: 361 IQTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQ 420
Query: 421 GIGAAPPLLHPQSMMAQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLP 480
GIGA PPLLHPQSMM QGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLP
Sbjct: 421 GIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLP 480
Query: 481 GVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRADESSYG 540
GVAPHVNPAFFGRGMPMNGMGMM SGVDGPNMGMWSDPSMGGWGSEEHGGGRA ESSYG
Sbjct: 481 GVAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGESSYG 540
Query: 541 EEAGSDQQYGEGSHDRGAWANSTKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDP 600
EEAGSDQQYGEGSHDRG WANS KEKDRGSERDWSQSSDRRYRD DRERSKEKDP
Sbjct: 541 EEAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSDRRYRD------DRERSKEKDP 600
Query: 601 GPDHDWPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHDRDRERDRDRDRDRYKED 660
GPDHDW DRRPRDDRD+GRERDK DRDRDRE SRDYERGH DR+RDRDRDRDR+KED
Sbjct: 601 GPDHDWQDRRPRDDRDVGRERDK--DRDRDRELSRDYERGH---DRDRDRDRDRDRHKED 660
Query: 661 RDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSRLSQEEENRSRTRDADYGKRRRLTSE 714
RDRYSDHHRYRDREPEHE++WERGRSSRTHSKSRL QEEE+RSR+RDADYGKRRRLTS+
Sbjct: 661 RDRYSDHHRYRDREPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRRRLTSD 707
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
AT5G55670.1 | 2.0e-191 | 58.48 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT5G55670.2 | 4.2e-125 | 46.05 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT1G13190.1 | 2.4e-59 | 35.46 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT1G60900.1 | 6.3e-04 | 37.50 | U2 snRNP auxilliary factor, large subunit, splicing factor | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CC60 | 0.0e+00 | 92.89 | Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. m... | [more] |
A0A0A0K3G6 | 0.0e+00 | 92.03 | RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G104800 PE=4 SV... | [more] |
A0A6J1ILS2 | 0.0e+00 | 91.07 | cleavage and polyadenylation specificity factor subunit 6-like OS=Cucurbita maxi... | [more] |
A0A6J1F726 | 0.0e+00 | 90.41 | cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita... | [more] |
A0A6J1CCR1 | 0.0e+00 | 89.85 | cleavage and polyadenylation specificity factor subunit 6 OS=Momordica charantia... | [more] |