Bhi09G001447 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G001447
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	30S ribosomal protein S10
Location	chr9: 46957976 .. 46962513 (+)
RNA-Seq Expression	Bhi09G001447
Synteny	Bhi09G001447

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAATACACACAGAAATTTATTTGGATAACGCTGCAACTCTGCCGGCAGATCATCCATTCTTTCAACTTCCGCCATTGATATTCAAAGCCAACTTCCATGGCTATTTCTTCACTCTCTGCTACTATAATCCCATCTCCTACTCTATTTAGTTCTTTATCATCCCATTCTTCTAAACCCAAACTTCTTCCATTCTCTGGTTTATCTTCTACTGCTTTAAAGCTCAAACCCCTTCAATTTTCGTTGCCAACGACAAGGGTTTATGTTGCTCCTGAAGTTCTAGACTCCTCGGATACCATTGAACCCCCTCCGGAAATCCTGGAGGGCTCTGGAGTTGCCACTCTCGAGGTTTGTGATAATTTTGTTCGGAATGGAGCAAAATGTTTCAATTTGTCTATGTTTTGTCATGGGTGCAAGAATTTTTGTTTACTATGGTTGTGACTCGGGATATGATTGACTGGTGGTGTTCTAAATTTCCATTTTGTTTTCAATTTTATTGCAAGTAGCTGAGGGACTTCCATTTTATTTTTGTCTAATGTTGTGTTCATGTTTAGGGTGAAGATTTTGAAGTGCCTGGTACTTCAGCGCTCGGCATTGGTGAGGATGTGGATAAGGTGAATTTTATGTTTTTTCAGATAATGTTTTACTCCAGCTTCTTGTGGCTTTATGAAGATATTAAATGTTCTGCAGAGAAACTTCTGAAACCAAAACTGAGCTCTGAAATATATAATGGCTTTGATGAGTAAAGAGTGGCCAGAAAATATACAATGAAATCATTTAATCAGATTATGTCAGTATCTTGATTTATGATCCTGCTAAGTTGACTGGGTAAGGTCATGATTGAATGGAAAACTGAAATTGTATGCATCAGTTGTAGATGTAGTGTTGTCTAACAGGCTAATGACATGTTTGGGAGTGATTTTGAAATGGTTAAAATCACTTTTTTCATTTTTTAAGATCATTAAAAAATGCTCTTGATCATTCAAAGTTAGTTTTAATAGTTTGAAAGTGTAAAATTAAACATTGAATTGATTTTGAGTGATTAGAAGTGTGTTGTGGGTTGCTTTAGACATGATAAAAGTGATTTTAACCATTTTAAAATCACTTTAAAATCACTCTCAAACATGCACTAAATAAGGTGATGAATCTCATGCAATGATAAAAGTTCCTAATGTAGTGGGATTGAGTGGAATGTTCATTTCCATATTCCTCTGTATGGAAGCTGCGTATGATGTATGTTCATCACAGAGATGCTAGTGCTATGATCACAGATGCCTTTTTCGGGAGAAGGGTGATTTTTTATGGATGGTGAGGGTGTGTGGATTTTATGGCTCTTGTGGGGTGAGCGAAATAGTAGGGTGTTTAGGGATGTAGAAAGGGACCCTAGGGAGATTTAGTCCCTTATTTGCCTATATGTCTCTTTGTGGGCTTTGATTTTGAAGACCTTTTGTAATTAGTCTATAGGTATGATTTCACATGGTTGGAGTCCCTTCTTGGGAGCTTTCCCTTTTTTGTGGGCTTGTTTTTTTTTTTTTTATGTCCATGTATTCTTTCATCTTTTCTCAATGAAAGTTTGTTTTTATCAAAAAAAAAAAATAATAATAATAATAAAAATAAAAATTAAACAACCTCCGCAACTGGGTAATGCATAGTTCTCCAATTGTACAATGGCTCCACTGGCTTAAGTTTTGTGATTTATTGGTCCATTAGGAGACATATATATGCATACACATTGGTAAAAAACTGAGCTTTCATTGGAAAAAAAAAAGAATACAAAGACATACAGAAAACGAGAGGACGCAAATTCGAAAGAACAAGGCCAAGAATAAGATCATAGTTACAAGAGGGCTTAGTGTGGGAAGTCCAAAGAGAGATTTAAACCTGGTCACCTCCCAAAATGTGGATACCAAGATATTCATTTTGTACTTTTATCTTCAAAATGCCAATATGGTCTTCAGCAGGTCACCGTGCCGCGTTTTGATTTGTTTGATTACCTGTGCTATGAGGTCTGTCTAGTCTAGGGACTTGTCTTAGCCTATTAGTGTTGTAATTGATAGTATCCATTTTTATCTTATATTTGGCTGATTTTAATGAACTAAAGATGTTTGTGGTTTCAGCTGGCGCCAAAGCAGAAAATTAGAATTAAACTAAGGTCTTACTGGGTTCCACTCATTGAAGATTCTTGCAAGCAGATAATGGATGCTGCAAGGAATACAAATGCAAAAACCATGGGTCCTGTGCCATTACCTACAAAAAAGCGCATCTATTGTGTTCTTAAATCCCCTCATGTTCATAAGGATGCAAGATTTCATTTTGAAATCAGAACCCACCAGCGCCTCATCGATATTTTGTACCCTACTGCCCAAACAATTGATTCTTTGATGCAACTTGACCTTCCAGCTGGTGTTGATGTGGAGGTCAAGCTATGAAGAGAACAGCTTCATCTAGGTAAAGATATATGGTCAGTATTCCTTTTACTGGTATATTGTCTTTCATGATGATGACATGCTAAATGTCTGCATCAAAACAAATCTATTATACAGCTAGCATTCCTTATCTGCTTCTTTAGTATTTTCTTCAAGAATTCAACTATTGTTAGTTTTTCCACACTAAAGTTTAAATGCTTGGCAGCATTTCTAAATTTAGCTACATCAATTAATTGTTGTGGTAGTGCAAGGTGGCTGATAGATCTCTGCTTTTAGTTTATTGAGAGGAAATCGAACCCTGTGAAGGGTCTAGCAGTCTGATATACACTAGATAAGGGGTTTTATTTTCTTCATAATTAATTAATAGCTCGGTTTCTCATGGAAAAGTTTTGTTTGCTTGTGTAGTTAAGCATCTAGATTGAAACAAATATGTACTCGTCAACAAGTGGAATCAGGAGTTAGTGTGACAATGTAAGAATAAGTCCATGAAACTATGAAAGTATAAGGGATTATGCTAGTAGAAAGGAGGATTGTTTCCTCCTGCAATAAGAAAAAACAGGAGGAGAGTCGATACTGGCTCTACGTTCGAGGCAAAAAAGGAATTGACATTTGAGATTTATGTCTTTGATAGAGTTGGGGTGAAAAAGAGAGAAAATTTGGCCTTTGTTTTGATCATAACATATTATGTAGCGAGGAAATAGAAGGAAGAGTTGGAAGGTTGTATTTGAATTTATTCCTTTTGTTTTGGGAACTTCACATAAAAGTGTCTTTATCTAGTAGGGGTGCTAGGAAAAATAAAAGATCTGAAAAATCCGCTTAAACAGACCAAAACTGCTTGTCGGTTCAGGTTGAAACGGGTCAGTTTGGCAATTTCATGTTGAACATATAAAAAATCGTAAATTTTCAGTCGGGTTAGGGTTATGCACAAAAAAAGAAAAGAAAAGAAAGGAAAAGTAAATTTGGATAACCGAATTGAATTGAACTGAACTGATTGATGATACATTTATAATAAATGCCAAATCTTATTTCATTTCAAAGGCTGCTTTGGTCAGGTTGGCGAGATCACGCATTGATAAATCAGGTCGTGAGTTCAATTATGGGAAAATGCATGATTTTATTTTACTTTGGGAAAAAAAAAAAAAGCGCATGTGAGACCTGTTCAATTCCATCTCCTTGACATGGCCATACCCGTGCACATGTGTAATCGGCAAACTGAGAGCCAAACAGACCTAACTGCTGGTCTAAGCTCTTCGGTCGGTACGGTTTCTCAAATAGTCTGGTTCGGTTTCAGTTTTCATGTTTCTTTCACCAATTAATCAGTTCGGCTTGAGTTTTCTGAAAACTGGAGCCGAACAATGCACTTACACTCCTATTATCTAGTAGGGGAAAATTGGTACCTGGTATCCCTTGGTGCCAATGCAAATTGGTATTATTTTCAACCTTTTACCCATTTCATTTCTATTGCTGAGTAATTTGTATGATTTCTCCCAAATCAATGTTATCTCCCCCTCATTATCCTGTTTACAACATTGCTATGGTGGATGGAACCGATTTCGCTAGTTTTGCACTTCGTTTATTCCGATAATCATCAGGCAGTCATATCGATTTTGGCCTGATTTCTTATATAGTTATTTACACACATTTCATTGTTAGATTGATCCCATGTTCATGCTCTCTTTAACACTTTTTGATTGGTTTTTTTGCATGTTAGGTAATGGGTTTCTGAGGATGTAACTACTGAAGTATATCAGAGCCTGAAATCTTGTAGACGATAACGATGGAACGGGTCGTAGAGACAATAGCTGGTCCTTACAGTATGCTTTTCTTTTGCTTGAATTTCTATGCCAATTCGGAAATGGGAGCAATGGAAATATAGGACTGTTAAAATCACATTTTCCTTTTTGTTAGTTCTTTGCTGCTTTGCAGTCTCTTATCAATTATTTTTATTAATTGTATTTTGTATTTTTTTTTTTTGGGTACTTAATGGAGCAATGAAAATGGTTGAATTCAATGCCTCACAACATCATCAAAATGCATAATTAAATATTCTTGAGACAACCTGATTTGTTTCTAATTTTCCATTAAAGTAATGTTCATGACCAG

mRNA sequence

AAAAAAAAAAAAAAATACACACAGAAATTTATTTGGATAACGCTGCAACTCTGCCGGCAGATCATCCATTCTTTCAACTTCCGCCATTGATATTCAAAGCCAACTTCCATGGCTATTTCTTCACTCTCTGCTACTATAATCCCATCTCCTACTCTATTTAGTTCTTTATCATCCCATTCTTCTAAACCCAAACTTCTTCCATTCTCTGGTTTATCTTCTACTGCTTTAAAGCTCAAACCCCTTCAATTTTCGTTGCCAACGACAAGGGTTTATGTTGCTCCTGAAGTTCTAGACTCCTCGGATACCATTGAACCCCCTCCGGAAATCCTGGAGGGCTCTGGAGTTGCCACTCTCGAGGGTGAAGATTTTGAAGTGCCTGGTACTTCAGCGCTCGGCATTGGTGAGGATGTGGATAAGCTGGCGCCAAAGCAGAAAATTAGAATTAAACTAAGGTCTTACTGGGTTCCACTCATTGAAGATTCTTGCAAGCAGATAATGGATGCTGCAAGGAATACAAATGCAAAAACCATGGGTCCTGTGCCATTACCTACAAAAAAGCGCATCTATTGTGTTCTTAAATCCCCTCATGTTCATAAGGATGCAAGATTTCATTTTGAAATCAGAACCCACCAGCGCCTCATCGATATTTTGTACCCTACTGCCCAAACAATTGATTCTTTGATGCAACTTGACCTTCCAGCTGGTGTTGATGTGGAGGTCAAGCTATGAAGAGAACAGCTTCATCTAGGTAATGGGTTTCTGAGGATGTAACTACTGAAGTATATCAGAGCCTGAAATCTTGTAGACGATAACGATGGAACGGGTCGTAGAGACAATAGCTGGTCCTTACAGTATGCTTTTCTTTTGCTTGAATTTCTATGCCAATTCGGAAATGGGAGCAATGGAAATATAGGACTGTTAAAATCACATTTTCCTTTTTGTTAGTTCTTTGCTGCTTTGCAGTCTCTTATCAATTATTTTTATTAATTGTATTTTGTATTTTTTTTTTTTGGGTACTTAATGGAGCAATGAAAATGGTTGAATTCAATGCCTCACAACATCATCAAAATGCATAATTAAATATTCTTGAGACAACCTGATTTGTTTCTAATTTTCCATTAAAGTAATGTTCATGACCAG

Coding sequence (CDS)

ATGGCTATTTCTTCACTCTCTGCTACTATAATCCCATCTCCTACTCTATTTAGTTCTTTATCATCCCATTCTTCTAAACCCAAACTTCTTCCATTCTCTGGTTTATCTTCTACTGCTTTAAAGCTCAAACCCCTTCAATTTTCGTTGCCAACGACAAGGGTTTATGTTGCTCCTGAAGTTCTAGACTCCTCGGATACCATTGAACCCCCTCCGGAAATCCTGGAGGGCTCTGGAGTTGCCACTCTCGAGGGTGAAGATTTTGAAGTGCCTGGTACTTCAGCGCTCGGCATTGGTGAGGATGTGGATAAGCTGGCGCCAAAGCAGAAAATTAGAATTAAACTAAGGTCTTACTGGGTTCCACTCATTGAAGATTCTTGCAAGCAGATAATGGATGCTGCAAGGAATACAAATGCAAAAACCATGGGTCCTGTGCCATTACCTACAAAAAAGCGCATCTATTGTGTTCTTAAATCCCCTCATGTTCATAAGGATGCAAGATTTCATTTTGAAATCAGAACCCACCAGCGCCTCATCGATATTTTGTACCCTACTGCCCAAACAATTGATTCTTTGATGCAACTTGACCTTCCAGCTGGTGTTGATGTGGAGGTCAAGCTATGA

Protein sequence

MAISSLSATIIPSPTLFSSLSSHSSKPKLLPFSGLSSTALKLKPLQFSLPTTRVYVAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALGIGEDVDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL

Homology

[Close]

BLAST of Bhi09G001447 vs. TAIR 10
Match: AT3G13120.1 (Ribosomal protein S10p/S20e family protein )

HSP 1 Score: 238.0 bits (606), Expect = 6.6e-63
Identity = 140/211 (66.35%), Postives = 160/211 (75.83%), Query Frame = 0


Query: 1   MAISSLSATIIPSPTL-FSSLSSHSSKPKLLPFS----GLSSTALKLKPLQFSLPTTRVY 60
           MA+S++S+ ++PS  +  SS SS   K  LLP S    GLSS  L  KP   S+  T+V+
Sbjct: 1   MAVSTVSSFLLPSFGIPSSSPSSTRLKVSLLPSSSTHGGLSSCVL-TKP---SVSLTKVF 60

Query: 61  VAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALGIGEDVDKLAPKQKIRIKLR 120
             P      DT++P PEIL+            EVP +S++ +  D DK+APKQKIRIKLR
Sbjct: 61  AVP------DTLDPTPEILDEPA--------SEVPSSSSISV--DADKMAPKQKIRIKLR 120

Query: 121 SYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 180
           SYWVPLIEDSCKQI+DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 121 SYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 180

Query: 181 RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           R+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 RMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191

[Close]

BLAST of Bhi09G001447 vs. TAIR 10
Match: AT3G13120.2 (Ribosomal protein S10p/S20e family protein )

HSP 1 Score: 238.0 bits (606), Expect = 6.6e-63
Identity = 140/211 (66.35%), Postives = 160/211 (75.83%), Query Frame = 0


Query: 1   MAISSLSATIIPSPTL-FSSLSSHSSKPKLLPFS----GLSSTALKLKPLQFSLPTTRVY 60
           MA+S++S+ ++PS  +  SS SS   K  LLP S    GLSS  L  KP   S+  T+V+
Sbjct: 1   MAVSTVSSFLLPSFGIPSSSPSSTRLKVSLLPSSSTHGGLSSCVL-TKP---SVSLTKVF 60

Query: 61  VAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALGIGEDVDKLAPKQKIRIKLR 120
             P      DT++P PEIL+            EVP +S++ +  D DK+APKQKIRIKLR
Sbjct: 61  AVP------DTLDPTPEILDEPA--------SEVPSSSSISV--DADKMAPKQKIRIKLR 120

Query: 121 SYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 180
           SYWVPLIEDSCKQI+DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 121 SYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 180

Query: 181 RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           R+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 RMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191

[Close]

BLAST of Bhi09G001447 vs. ExPASy Swiss-Prot
Match: Q9M4Y3 (30S ribosomal protein S10, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 GN=RPS10 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.3e-63
Identity = 143/212 (67.45%), Postives = 159/212 (75.00%), Query Frame = 0


Query: 1   MAISSLSATIIPSPTLFSSLSSHSSKPKLLPFSGLSSTALKLKPLQFSLPTT------RV 60
           MA SSLS TI+ SP   S+ SS  +KP++   S  SS +   + L  S P++      RV
Sbjct: 1   MATSSLS-TIVFSPLALSNSSSFPNKPQVSNLSLHSSLSNLRRTLSHSSPSSSSSSNVRV 60

Query: 61  YVAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALGIGEDVDKLAPKQKIRIKL 120
           + APEVL+S +T  P   + EGS              TSALGIG D D++APKQKIRIKL
Sbjct: 61  FAAPEVLESQET-GPESYVEEGS-------------ETSALGIGADSDQMAPKQKIRIKL 120

Query: 121 RSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTH 180
           RSYWVPLIEDSCKQIMDAAR TNAKTMGPVPLPTKKRI+CVLKSPHVHKDARFHFEIRTH
Sbjct: 121 RSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIFCVLKSPHVHKDARFHFEIRTH 180

Query: 181 QRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           QRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 QRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 197

[Close]

BLAST of Bhi09G001447 vs. ExPASy Swiss-Prot
Match: Q9LK61 (30S ribosomal protein S10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS10 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 9.3e-62
Identity = 140/211 (66.35%), Postives = 160/211 (75.83%), Query Frame = 0


Query: 1   MAISSLSATIIPSPTL-FSSLSSHSSKPKLLPFS----GLSSTALKLKPLQFSLPTTRVY 60
           MA+S++S+ ++PS  +  SS SS   K  LLP S    GLSS  L  KP   S+  T+V+
Sbjct: 1   MAVSTVSSFLLPSFGIPSSSPSSTRLKVSLLPSSSTHGGLSSCVL-TKP---SVSLTKVF 60

Query: 61  VAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALGIGEDVDKLAPKQKIRIKLR 120
             P      DT++P PEIL+            EVP +S++ +  D DK+APKQKIRIKLR
Sbjct: 61  AVP------DTLDPTPEILDEPA--------SEVPSSSSISV--DADKMAPKQKIRIKLR 120

Query: 121 SYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 180
           SYWVPLIEDSCKQI+DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 121 SYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 180

Query: 181 RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           R+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 RMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191

[Close]

BLAST of Bhi09G001447 vs. ExPASy Swiss-Prot
Match: P82162 (30S ribosomal protein S10 alpha, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS10 PE=1 SV=2)

HSP 1 Score: 218.8 bits (556), Expect = 5.8e-56
Identity = 135/214 (63.08%), Postives = 149/214 (69.63%), Query Frame = 0


Query: 1   MAISSLSATIIPSPTLFSSLSSHSSKPKLLPFSGLSSTALK--LKPLQFSLPTT------ 60
           MA SS+SA ++ SP    + SS S+K     FS LSS  L+  L P   S  T       
Sbjct: 1   MATSSISAALL-SPLTLRNASSSSTKQ---DFSTLSSLNLRRTLTPTLQSGHTLSNSSNF 60

Query: 61  RVYVAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALGIGEDVDKLAPKQKIRI 120
             + AP  L          E+LE S  +  +G +     TS + I  D D++APKQKIRI
Sbjct: 61  ATFAAPGAL----------EVLETSPDSFEDGSE-----TSKISIAADSDQMAPKQKIRI 120

Query: 121 KLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIR 180
           KLRSYWVPLIEDSCKQIMDAAR TNAK MGPVPLPTKKRIYCVLKSPHVHKDARFHFEIR
Sbjct: 121 KLRSYWVPLIEDSCKQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIR 180

Query: 181 THQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           THQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 THQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 195

[Close]

BLAST of Bhi09G001447 vs. ExPASy Swiss-Prot
Match: P17009 (Cyanelle 30S ribosomal protein S10 OS=Cyanophora paradoxa OX=2762 GN=rps10 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.9e-33
Identity = 65/98 (66.33%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 109 KIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFH 168
           KIRI+LRSY   L+E+SC+QI++AA+ T+A  +GP+PLPTKK+IYCVL+SPHV KD+R H
Sbjct: 8   KIRIQLRSYDSSLLENSCEQIIEAAKRTDATAVGPIPLPTKKKIYCVLRSPHVDKDSREH 67

Query: 169 FEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           FEIR H+R+ID+  P+++TID+L +LDLPAGVDVEVKL
Sbjct: 68  FEIRVHRRIIDLYLPSSKTIDTLTRLDLPAGVDVEVKL 105

[Close]

BLAST of Bhi09G001447 vs. ExPASy Swiss-Prot
Match: B7K833 (30S ribosomal protein S10 OS=Gloeothece citriformis (strain PCC 7424) OX=65393 GN=rpsJ PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.6e-32
Identity = 62/100 (62.00%), Postives = 86/100 (86.00%), Query Frame = 0


Query: 107 KQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDAR 166
           +QKIRI+L+++   L++ SC++I+D A  TNA  +GP+PLPTK+R+YCVL+SPHV KD+R
Sbjct: 6   QQKIRIRLKAFDRRLLDTSCEKIVDTANRTNATAIGPIPLPTKRRVYCVLRSPHVDKDSR 65

Query: 167 FHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
            HFE RTH+R+IDI  P+++TID+LM+LDLPAGVD+EVKL
Sbjct: 66  EHFETRTHRRIIDIYQPSSKTIDALMKLDLPAGVDIEVKL 105

[Close]

BLAST of Bhi09G001447 vs. ExPASy TrEMBL
Match: A0A1S3CI46 (30S ribosomal protein S10, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501224 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.5e-104
Identity = 199/206 (96.60%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MAISSLSATIIPSPTLFSSLSSHSSKPKLLPFSGLSSTALKLKPLQFSLPTTRVYVAPEV 60
           MAISSLSATIIPSPTLF+SLSSHSSKPK LPF G SSTALKLKPLQFSLP+TRVY APEV
Sbjct: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 60

Query: 61  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALGIGEDVDKLAPKQKIRIKLRSYWVP 120
           LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSAL IGEDVDKLAPKQKIRIKLRSYWVP
Sbjct: 61  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180
           LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 207
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]

BLAST of Bhi09G001447 vs. ExPASy TrEMBL
Match: A0A0A0LEH6 (Ribosomal_S10 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G769090 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.2e-101
Identity = 193/206 (93.69%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 1   MAISSLSATIIPSPTLFSSLSSHSSKPKLLPFSGLSSTALKLKPLQFSLPTTRVYVAPEV 60
           MAISSLSATIIPSPTLF+SLSSHSSKPK  PF   SSTALKLKPLQFS P+TR+Y APEV
Sbjct: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFPPFPASSSTALKLKPLQFSFPSTRLYAAPEV 60

Query: 61  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALGIGEDVDKLAPKQKIRIKLRSYWVP 120
           LDS DTIEPPPEILEGSGV+TLEGEDFEVPGTSAL IGEDVDKLAPKQKIRIKLRSYWVP
Sbjct: 61  LDSPDTIEPPPEILEGSGVSTLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180
           LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 207
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]

BLAST of Bhi09G001447 vs. ExPASy TrEMBL
Match: A0A6J1F6U3 (30S ribosomal protein S10, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111442692 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.0e-96
Identity = 186/206 (90.29%), Postives = 190/206 (92.23%), Query Frame = 0


Query: 1   MAISSLSATIIPSPTLFSSLSSHSSKPKLLPFSGLSSTALKLKPLQFSLPTTRVYVAPEV 60
           MAISSLSATIIPSP+LF  LSS   KP+ LPFSG SSTALKLKPL FSLP++RVY APEV
Sbjct: 1   MAISSLSATIIPSPSLFVPLSSLHPKPRFLPFSGSSSTALKLKPLHFSLPSSRVYAAPEV 60

Query: 61  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALGIGEDVDKLAPKQKIRIKLRSYWVP 120
           LDSSD  EPPPEILE SG ATLEGEDFE PGTSA  IGEDVDKLAPKQKIRIKLRSYWVP
Sbjct: 61  LDSSDANEPPPEILEDSGAATLEGEDFEAPGTSAFSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180
           LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 207
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]

BLAST of Bhi09G001447 vs. ExPASy TrEMBL
Match: A0A6J1J2J9 (30S ribosomal protein S10, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111480677 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.3e-95
Identity = 185/206 (89.81%), Postives = 190/206 (92.23%), Query Frame = 0


Query: 1   MAISSLSATIIPSPTLFSSLSSHSSKPKLLPFSGLSSTALKLKPLQFSLPTTRVYVAPEV 60
           MAISSLSATIIPSPTLF  +SS SSKPKLLPFS  S++  KL PLQFSL +TRVY APEV
Sbjct: 7   MAISSLSATIIPSPTLFGPISSLSSKPKLLPFSASSTSVSKLNPLQFSLSSTRVYAAPEV 66

Query: 61  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALGIGEDVDKLAPKQKIRIKLRSYWVP 120
           LDS  T EPPPEILEGSG A LEGEDFEVPGTSAL IGEDVDKLAPKQKIRIKLRSYWVP
Sbjct: 67  LDSPGTFEPPPEILEGSGAAVLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 126

Query: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180
           LIEDSCKQI+DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 127 LIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 186

Query: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 207
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 187 LYPTAQTIDSLMQLDLPAGVDVEVKL 212

[Close]

BLAST of Bhi09G001447 vs. ExPASy TrEMBL
Match: A0A6J1CD58 (30S ribosomal protein S10, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111010584 PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.0e-95
Identity = 183/206 (88.83%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 1   MAISSLSATIIPSPTLFSSLSSHSSKPKLLPFSGLSSTALKLKPLQFSLPTTRVYVAPEV 60
           MAISSLSA+IIPSPTL   LSS SSKP+LLPFSG SSTALKLKPLQFS  +TRVY APEV
Sbjct: 1   MAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQFSSSSTRVYAAPEV 60

Query: 61  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALGIGEDVDKLAPKQKIRIKLRSYWVP 120
           LDSSDTIEPPPEILEGSG +TLEGE++E PGTSAL IGEDVD+LAPKQKIRIKLRSYWVP
Sbjct: 61  LDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLRSYWVP 120

Query: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180
           LIEDSCKQIMDAAR+TNAK MGPVPLPTKKRIYCV+KSPHVHKD+RFHFE RTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQRLIDI 180

Query: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 207
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

The following BLAST results are available for this feature:

BLAST of Bhi09G001447 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13120.1	6.6e-63	66.35	Ribosomal protein S10p/S20e family protein	[more]
AT3G13120.2	6.6e-63	66.35	Ribosomal protein S10p/S20e family protein	[more]

BLAST of Bhi09G001447 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M4Y3	1.3e-63	67.45	30S ribosomal protein S10, chloroplastic OS=Mesembryanthemum crystallinum OX=354...	[more]
Q9LK61	9.3e-62	66.35	30S ribosomal protein S10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1...	[more]
P82162	5.8e-56	63.08	30S ribosomal protein S10 alpha, chloroplastic OS=Spinacia oleracea OX=3562 GN=R...	[more]
P17009	6.9e-33	66.33	Cyanelle 30S ribosomal protein S10 OS=Cyanophora paradoxa OX=2762 GN=rps10 PE=3 ...	[more]
B7K833	2.6e-32	62.00	30S ribosomal protein S10 OS=Gloeothece citriformis (strain PCC 7424) OX=65393 G...	[more]

BLAST of Bhi09G001447 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CI46	3.5e-104	96.60	30S ribosomal protein S10, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501224...	[more]
A0A0A0LEH6	6.2e-101	93.69	Ribosomal_S10 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G7690...	[more]
A0A6J1F6U3	6.0e-96	90.29	30S ribosomal protein S10, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1J2J9	1.3e-95	89.81	30S ribosomal protein S10, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1CD58	3.0e-95	88.83	30S ribosomal protein S10, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001848	Ribosomal protein S10	PRINTS	PR00971	RIBOSOMALS10	coord: 109..122 score: 42.58 coord: 165..179 score: 52.82 coord: 144..159 score: 53.37
IPR001848	Ribosomal protein S10	TIGRFAM	TIGR01049	TIGR01049	coord: 108..205 e-value: 1.2E-39 score: 132.6
IPR001848	Ribosomal protein S10	PANTHER	PTHR11700	30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER	coord: 1..206
IPR001848	Ribosomal protein S10	HAMAP	MF_00508	Ribosomal_S10	coord: 107..206 score: 24.177229
IPR027486	Ribosomal protein S10 domain	SMART	SM01403	Ribosomal_S10_2	coord: 111..205 e-value: 3.9E-51 score: 185.9
IPR027486	Ribosomal protein S10 domain	PFAM	PF00338	Ribosomal_S10	coord: 111..205 e-value: 1.9E-32 score: 111.4
IPR036838	Ribosomal protein S10 domain superfamily	GENE3D	3.30.70.600	Ribosomal protein S10 domain	coord: 98..206 e-value: 3.7E-41 score: 141.7
IPR036838	Ribosomal protein S10 domain superfamily	SUPERFAMILY	54999	Ribosomal protein S10	coord: 109..206
None	No IPR available	PANTHER	PTHR11700:SF31	BNAC05G40270D PROTEIN	coord: 1..206
IPR018268	Ribosomal protein S10, conserved site	PROSITE	PS00361	RIBOSOMAL_S10	coord: 133..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M001447	Bhi09M001447	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding