Bhi09G001098 (gene) Wax gourd (B227) v1

Overview
NameBhi09G001098
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionPectinesterase
Locationchr9: 32895592 .. 32897636 (+)
RNA-Seq ExpressionBhi09G001098
SyntenyBhi09G001098
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TAACAACCAGGTACTAATCTTTTAATCTTTTAAATTTTGGAAAATAGTAAAAACCACTCCTAAGATATGGTTAATAATTAAAATTGAACTCTTAAACTTATATGAGTGTTAGAATCTGACTCTCAAATTTATAATAATTGTAAAATTTTATCCGCCAAATGTTAAAATTGAAGTTTCAAACTTATACAATTGTTTTCCGGTCTAACTTTAATAACTATTATGTAAGCTTCGAGTCTACCTTTAACAATTGAATGTTTCAACTTATTATTGCAACTACCACTTTCAACTATGTCGTACAGTAATTTCACAACTATTTATTAATTTACTTACAACCATTATTGTTTGTTTTCATAATTTTACCTTCTATTAGAAGTTTGTATTTATAGAGTTTTTAAAGTGCTTAATAAATTTTTAAACTAACTTTTAATGTTTTTTTCTCAATGCATCATTGAACTTTGAATTTTATGTGTTTGACAAATTCAAAATTTTCAATTAAAAAATTAATAACGTTTTTCTCTAACAAAAATTAAACAAATATTTTTTGGTTGGCGAGATTTTTATATAATAAAATATTACAAAGTTTTTTCATTTATCACTTTAACGTAGTTTTATCTATTAATATTAATTAAATTGTTATAATAGAATATTAAATATCACAAATTTTAAATAGTTCATAATAATACTAACTGTTGTCTAAGTAATAAACTATGTTAATTATTTTAATGGATAAAACAATTTTATTTTAGTGAAATTATAATTGGTGATAGAACTAGTTGGTATGTTATCCAACTTGAGCATATTTAACTAGTTAAAGAACGAGATTTTAAAAAATAGAAAAATAAAGTAAACTATTTATGCAAAACAGTAAAATTTTAATCTTCTCTTATAAAGGTTGATAGAAGTCAATCATTATCTATCAATGATTGAAATTGATAGAAGTCTATCACTAATAGACATAGAAGTCTATGAGTATTTTTTTGCTATTTTTATAAATAGTTTGACATTTATCTTATTTGTAAAAAATTCTCTTAAAGAAATATGTCTTGACCATATGTAGTTATGTTTACGAATTTTTTTCCGTACCAATTTTTCATATATTTGGATCAATAGTAATATATTCTTAAAAATTTGAAGACTATAATGATACATATTGAGAACTTAGGATAAAACATATTAGAAATGCATTCTGCGAAAACGATACTAGCGTTCTATTTTTCTAGAAATATGAAAGCGAAAATGTTTAGTAATTTGATGTATTTTGATTCCTATCTTGGTTCTAGATACGGCTTTGTAGGTAACAATTGTAACACGTTTCTGAATCCAATTATTGGACATTTCTGCCTTTTACATTAGTTTTGATTTTGATTGTATGACAGTGAATGAGACGTATGATTGGAGATTTTTTTCTTTTTTTAAATATTTTTGAATATAAATATGAAGGGAGGATTGAACCTCAAATCTCAAACGAGCGACTGCATATCAATTATATATCAAGCTAAACTCATTTTTACATACTATACTTAATAATGCCAATACATCAAAATTATTATTATATCAATTACATTATTTAAGTCCATCATGGGATATCCGAAATGTACCATCATTGATGAGATAATTGTAATGAATAAAACTTTTAAGATTAATAATTAAGTATATGGTAACATTTTTAAAGAATTGCAAATAGACTCTTATCGACGATACGATCTATCTTAATGTATTCAAGTTTAGGCAAAACTATAGGGAAGGAAACATTGAGACAATAAGGACTAAATTAACCCAAAACACAAACCACACAACAAAAATTGAAACATTTGGAGCAGTAACTAAGGGACCAAATTGAAATTTTGTGAAAATAATAGGAGGAAGGTGAGAATAATAGAGGAAGGAAGGGTTTAGAAGATGAAATAAAGTGGCCAGAATGGATGGCAACCGGTGACCAGAGGCTTATGGAGTCATCGATGGAAGCTGCGGCGGACGTGGTGGTGGCGGCAGATGGAAATGGAAATTATAAAATAGTCGGAGGCGGTGGCGGCGGCGCCGAGTAA

mRNA sequence

TAACAACCAGGAGGAAGTGGCCAGAATGGATGGCAACCGGTGACCAGAGGCTTATGGAGTCATCGATGGAAGCTGCGGCGGACGTGGTGGTGGCGGCAGATGGAAATGGAAATTATAAAATAGTCGGAGGCGGTGGCGGCGGCGCCGAGTAA

Coding sequence (CDS)

TAACAACCAGGAGGAAGTGGCCAGAATGGATGGCAACCGGTGACCAGAGGCTTATGGAGTCATCGATGGAAGCTGCGGCGGACGTGGTGGTGGCGGCAGATGGAAATGGAAATTATAAAATAGTCGGAGGCGGTGGCGGCGGCGCCGAGTAA

Protein sequence

TTRRKWPEWMATGDQRLMESSMEAAADVVVAADGNGNYKIVGGGGGGAE
Homology
[Close]
BLAST of Bhi09G001098 vs. TAIR 10
Match: AT3G43270.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 40.8 bits (94), Expect = 3.7e-04
Identity = 16/37 (43.24%), Postives = 25/37 (67.57%), Query Frame = 0 

Query: 5   KWPEWMATGDQRLMESSMEAAADVVVAADGNGNYKIV 42
           K+P W+  GD++L+++     AD VVAADG GN+  +
Sbjct: 192 KFPSWVKPGDRKLLQTDNITVADAVVAADGTGNFTTI 228

[Close]
BLAST of Bhi09G001098 vs. ExPASy Swiss-Prot
Match: Q43143 (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum OX=4081 GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.4e-05
Identity = 22/37 (59.46%), Postives = 30/37 (81.08%), Query Frame = 0 

Query: 5   KWPEWMATGDQRLMESSMEAAADVVVAADGNGNYKIV 42
           +WPEW++ GD+RL++SS     DVVVAADG+G+YK V
Sbjct: 251 EWPEWLSAGDRRLLQSS-TVTPDVVVAADGSGDYKTV 286

[Close]
BLAST of Bhi09G001098 vs. ExPASy TrEMBL
Match: A0A0A0K6S6 (Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_7G343850 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.2e-06
Identity = 27/37 (72.97%), Postives = 30/37 (81.08%), Query Frame = 0 

Query: 5   KWPEWMATGDQRLMESSMEAAADVVVAADGNGNYKIV 42
           KWPEWM+  DQ L++SS E AADVVVAADG GNYK V
Sbjct: 252 KWPEWMSIQDQMLLDSSSEEAADVVVAADGTGNYKTV 288

[Close]
BLAST of Bhi09G001098 vs. ExPASy TrEMBL
Match: A0A0A0K9Y3 (Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_7G343870 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.2e-06
Identity = 26/37 (70.27%), Postives = 32/37 (86.49%), Query Frame = 0 

Query: 5   KWPEWMATGDQRLMESSMEAAADVVVAADGNGNYKIV 42
           KWP+WM+  DQ+L+ESS EAAA+ VVAADG+GNYK V
Sbjct: 245 KWPKWMSIEDQKLLESSSEAAAEAVVAADGSGNYKTV 281

[Close]
BLAST of Bhi09G001098 vs. ExPASy TrEMBL
Match: A0A1S3C861 (Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103497582 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-05
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 5   KWPEWMATGDQRLME-SSMEAAADVVVAADGNGNYKIV 42
           KWPEWM+  DQ+L+E SS EAAADVVVA DG+GNYK V
Sbjct: 251 KWPEWMSIQDQKLLESSSSEAAADVVVAVDGSGNYKTV 288

[Close]
BLAST of Bhi09G001098 vs. ExPASy TrEMBL
Match: A0A5D3E4E8 (Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G001330 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.4e-05
Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 5   KWPEWMATGDQRLME-SSMEAAADVVVAADGNGNYKIV 42
           KWPEWM+  DQ+L+E SS EAA DVVVA DG+GNYK V
Sbjct: 240 KWPEWMSIQDQKLLESSSSEAAVDVVVAVDGSGNYKTV 277

[Close]
BLAST of Bhi09G001098 vs. ExPASy TrEMBL
Match: A0A5A7SNA2 (Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G001370 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.4e-05
Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 5   KWPEWMATGDQRLME-SSMEAAADVVVAADGNGNYKIV 42
           KWPEWM+  DQ+L+E SS EAA DVVVA DG+GNYK V
Sbjct: 234 KWPEWMSIQDQKLLESSSSEAAVDVVVAVDGSGNYKTV 271

The following BLAST results are available for this feature:
BLAST of Bhi09G001098 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G43270.13.7e-0443.24Plant invertase/pectin methylesterase inhibitor superfamily [more]
BLAST of Bhi09G001098 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q431431.4e-0559.46Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum OX=4081 GN=PM... [more]
BLAST of Bhi09G001098 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6S65.2e-0672.97Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_7G343850 PE=3 SV=1[more]
A0A0A0K9Y35.2e-0670.27Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_7G343870 PE=3 SV=1[more]
A0A1S3C8611.5e-0573.68Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103497582 PE=3 SV=1[more]
A0A5D3E4E84.4e-0571.05Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00133... [more]
A0A5A7SNA24.4e-0571.05Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G001370... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M001098Bhi09M001098mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042545 cell wall modification
biological_process GO:0043086 negative regulation of catalytic activity
biological_process GO:0045490 pectin catabolic process
molecular_function GO:0045330 aspartyl esterase activity
molecular_function GO:0030599 pectinesterase activity
molecular_function GO:0046910 pectinesterase inhibitor activity