Bhi09G000435 (gene) Wax gourd (B227) v1

Overview


Name	Bhi09G000435
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic
Location	chr9: 11160156 .. 11165026 (+)
RNA-Seq Expression	Bhi09G000435
Synteny	Bhi09G000435

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCAAGAAGTTGAAGGGGCTAATGCAAATATTCTAGAAGAGAGAGGACCCGCGGGAAAATCATAAAGTGGCGTCTTCAAGTTCGTTATCGTCTCATCCAAACGACCGGCTGTCTTTTCCCCGGCGACTGAACTTCGACTGAGAACTTCAGAGAGCTTAGCCATGGCGATCATGGCGTTTGTCTCTTCACCACCGCAAATTCCCTCTCTATCTCGATCGTTTCACAGCAACTTTCTCTTCTCTCCCATTTCCTCTTCCTTCTGCGCACTACGGCGTTCTACACGATCCAGCTTATTTGGCGCTCAAACTTTGGCAACTTCGGGATTTTGCTTTAGGATACACTGTCGTGACAAAGAACGAACTTCACCGGTTACTCAGAGCTCCGATCCTAAGGCTGGAGTTCCCATTTATAAGCCCAAAACCTACGAGGTCTTAGTCTCCGATGCTGCGAATTCTCTTGCTTATGCTCTGGAGGACGGAAAGATCCGCTTGGAGATTGATTTCCCGTAATCTTTCGTTTTCTCTATGAATATTGGGGGTCTTATTCTTCAGTCCTATTAGGCTTGTTTTTTTAGGAACACTGTCCATTCCTTTAATTTGTTACTTAGCAAGTTAGCATTAGAGTTATTACTACAATGCTGTACGTTTATTTTCGTTTCTGCTAATTCCTCTGCCCCGAAGTATAGTAATCGGTTGTGGGTTTTATTTCAGTCTTATTTGAAACTGAGATTCAAACCGTAGTCCGTTTAGGTAAATTGTTTCTTAATATCTTTGCAGCTTATGAGAAGTAACAATATCCTTTTAGCGTCGAAATGTTTCGGAGTATAATCCTCATTATTTTCTAACCCTCGTTTTGTTTTTTGTTTTTTTGGTGGGATTTCCTATATTCAGACCCCTGCCTAGCAACATTTCTTCGTATAAGGTATCTTTCTAAAGCATGTTCTTAATGGAATTCGATGCTCAGAACATTATGTTTTCTCATTTATTAAAATACTCCCCATATAGGCCTTTTCCTTAGAGGATATTTCTATATATGTAAAGGGATCCTTGTATGATTTCATTGATGTAAATAATCAACTTGCAAGGAACCTCAAAGAAAAGGGGGAAAACTAGACCTGCTTAAATATTTAGTCGTTCATCATAAATCTTCAACCAATGTACCTTGCAGCTCGTATTAGTTCTCGATTATAGATGTACTCAGTTAACCTAGGGCCATGGTATAAATTGTCCAAAGAATTTTATGCTTGCATGTTTTTCTTTTATGAGCTAGCCATGAATATAGAATAGTATTCCTTGCGAGGACACCAGTTGAAAAGAAGTTGTGAATAGTATATTAACATGAGGTATAGATAAATGCCTCCACCGATTTGACACTTGATGTGTGGAGTATGGGTTACATTCAGAATTATGTTGATTTGGATTGTTGATAGCAGATGTTCATTTGATTTGAGAAAATTTCTAAATATGTCAAGGGATCTTCAGATGAGTTCATTGATGCAAATATCCAACTTGCCCTGGCTGTTGCAAGGAATCTTCAAGAAAAGAGAGGAACTAGATCTTGCATTGTAAGCAACTATGTATATATACACACACATATATATATATTGCAAACCCCTTTGGAAGTTTGTGCAGCTGTTAAAAACTCGTGTTATAACTTTAGGTGTTTCCAGATAAGCCAGAGAAGCGCAGAGCTTCACAGTTGTTCAAAACAGCTCTCGACTCGGTAACAAGCCAACTCTTCAAACCTCTTTGTTTTGCCTTGTTGTTAAGAAGTAAATATTTTGTTTAAGATGGTAAGAGTACCAAAAGAGAGGGAAGATCCAAACCAAGTGAAAAGATATTACAGCAGAAACTCTGTGGTTGTTATTAATTGGTTATATAAATAATTCTGGAGGATTGGGAAAAACACCCCAAGAAGGACATCCTAAAGTTGTTAAGAAAAAAAATCTATATATTCGATGAAAAATTATCCTATTTGTCTCTAGTCAGTCCTTCCAAAGATAGTGAAAAGAGCATCCACCCAAAGCCTCAACTGCTTCATCTTAAGGGATTTTTTCATTTTTTAAAAAAATGTATTTGTTCCCACCATGATGAGGGTTTAGGCAAGCTTGTCCACACAATATAAATCTTGGTCCCCGTTTTATGTGCTCATTTGATCTTGTTTTTCCCTTTTATCTTTCAGATTGATGGAATAACCGTAAGTTCCCTGGATGATGTCCCTGCTGGGCCTGTCACATCTTTCTTCAGATCTGTTAGAAACACCCTTGATTTTGATTTTGAAGACGAGAATTCAGGTTGGTTCTATACGCATGGATCTCAGAAGATGTTTCACATTCTTGTCCTCTTTTTTTTATTATGTGCATGTCATGGCCATGTGTTTCACTATTAAGTGCGTTTTGCAAATATATGATATATTTTGCATGACCCTAACCATTATGGCAAGACTGAAACTTACATTCATAAACTGTATAATAAAGAAAAGGAAAATGACAGGGAGAAAAGAAAGAGCCAAAGGGAAGAAAAAAATGATGAGAGAAAAAAAAGAGAGAAATACTATGATCGAACATAATCCTATATGAGAGAACTATGTATAAACTTAAAACTGCCTCTTCCTATGTATTTCACTTCACTTTTGTGGATATAAACATGTTTCTTCTTGTTCAGCTTGTCTGTATGTGTTATATTGTAATAATCTTTTATTTCTTTACCCGCTTTTCTCCAGGGCCAACATTCTCATTTGATGATTTCTCACTCTTTGCAATCTATCTGATTTGCAGGTCGTTGGACATCTAGTGACCCTCCATCTTTGTATATATTCATTAATTGTAGCACGCGTGAACTTGGTTTGATAGAGAAGTATGTGGTATGATGTCTATGCTAATTGCAAGATAGCAATTTTTGAACCTATGGCATAAACTGATTAGCTTCTGATTAAAAGTTATCATGATTTCTTCTCTAATTGGTCACGTTGGGCTAATTTCCGTTTTTTCACTACATATTTTCTTAAAATGTTTTCCTCCTATTGATTATGATTTAGCTGTCTACTGAATACTGATATTTTAGAGGACATGGGGTGAGTTCTTATAATTATTGCCGTTACATAAGTGGCATCTTTCATGGTGGGATTGATGGTTATAAAATACTTCTTCTCCAACTTAATAGGCACGTTCTGCGTAAGACCTATTCATGGCTTTCTGAGTGACATTTTTTCACGTAATAAGTTATGTTTTAGTTAACTTCATTTGGTTTAGCCCAATTTGTTTTTGCCTGTCAACATAAGGTGACTCATTTTGGGATTTGCAGGAAACTTTTGCTTCGTCAATCCCCACCCTGTTGTTTAATCTAGAACTTGAAACCTTGCGGTAATGATCCTCCTCTTCATCCATCTTTGATAGATATTGGGTTCATATATGTAACTACTGATCAAAAGTTTGTAAATTACAGTGCGGACTTGGGCTTACTGGGATTCCCCCCCAAAGATTTGCATTATCGATTTCTCTCTCAATTTATCCCAGTGTTCTATATTCGAATCAGAGAGTATTCTAAGGTCTCGGATCTCATCTTGGAAACTTTTTTAGTTATACTTATATTTATATCTTGACTAAATTCTCTATTCTTGGTTCTCTTTGGGGGGAGGGATACTAAGACAGTAGCAGTAGCACCGTATATTGTTAATTACAGTGGAGCATTGTTTCGTCAATACCCTGGTGCGTATAATGTTTTATTGCACTTTCTGTTGGAGAATTTCGTTTTTTAATTCTCTTGATATCTTTCTGTGTCCAAATTGGTTCACCACCCTCTTAAGTTTCGCTAGCTAATTTTTAGATTCATCTGTGTTTTTACATCTATCTGTCGTCATTTCTATTCATCCTCATAATACTTTCAGGACCTTGGCAAGTGATGCTAAAACAATCAGATAATTCTTATGCTTGCGTTGCAGAGAGTGAGACAAGGTTCACCCTTGGTGAAGTATGTAAAACTGAAGTACTTCAAACTTTTAGCTGTTAAACATTTGTCTGGTGTTTTTGGACTAACCGTTGCTTGTAATTTAGACCAAAGATGAACTATTAAGGGTCCTTGGACTACAGGAAGAACAAGGAAGCTCACTAGAATTTCTCCGCAGGGGCTACAAGGTTTTTTCTTTATATCTGTGATTCTGTTTTATATCTTTCCTTCTATATGGCGATAACTCATTGCTACTTTTTCTTGTGCAATTAATTCTTATTTGCTTCCCCACCAACCTACCAGAAATTTGAAGAGAAATCTGCTTCATATTTTGCTGCCAAATCGTATTAGTAAAATTGTAGGAAACTGTTGAAATCTAGTCTACTTTTGCAGGCTGCCACTTGGTGGGAAGAAGATGTTGACTCTGAAGTATCTTCGGCATGGCGTAGTTGAGCACCTCTAGTGTCAATTATTTCCTCGTATTTTCGTAGACACAACGTTGATGACATCGGACACGAGATTTCAACTATATTTCCTTGATCAAACGGATGGCTTCTTTATAAAAGACTCTTATGGCTATCTTTGAAGAGTTACTGCAGGGAAATTCTATCTCAAAAGTTAAATCTACATCTCTTTTCAACCCACCAGCTTCAGAAGATTGACACAAACTTGAATCCAGCTCATTCACCTCTGGAATTCAAGGTGAAGTAATCTTGTACATTTTATAAGTCGCAGTAAATTACGATTTGTTGTTCATCCTTGATACTGAGTTTCTTTTTCTTTTTCACTCATGTTCCTTTAAAAAAGTATAAATCAGGCCTCTTAGATGGTTTAATCCTTGCCAAGTATGAAGTTCAACTATTTTCATGCAATATGTGGTTCATAACTGAGTTTTTTAACTGAATCCATAATATGTAGAACAATC

mRNA sequence

ATTTCAAGAAGTTGAAGGGGCTAATGCAAATATTCTAGAAGAGAGAGGACCCGCGGGAAAATCATAAAGTGGCGTCTTCAAGTTCGTTATCGTCTCATCCAAACGACCGGCTGTCTTTTCCCCGGCGACTGAACTTCGACTGAGAACTTCAGAGAGCTTAGCCATGGCGATCATGGCGTTTGTCTCTTCACCACCGCAAATTCCCTCTCTATCTCGATCGTTTCACAGCAACTTTCTCTTCTCTCCCATTTCCTCTTCCTTCTGCGCACTACGGCGTTCTACACGATCCAGCTTATTTGGCGCTCAAACTTTGGCAACTTCGGGATTTTGCTTTAGGATACACTGTCGTGACAAAGAACGAACTTCACCGGTTACTCAGAGCTCCGATCCTAAGGCTGGAGTTCCCATTTATAAGCCCAAAACCTACGAGGTCTTAGTCTCCGATGCTGCGAATTCTCTTGCTTATGCTCTGGAGGACGGAAAGATCCGCTTGGAGATTGATTTCCCACCCCTGCCTAGCAACATTTCTTCGTATAAGGGATCTTCAGATGAGTTCATTGATGCAAATATCCAACTTGCCCTGGCTGTTGCAAGGAATCTTCAAGAAAAGAGAGGAACTAGATCTTGCATTGTGTTTCCAGATAAGCCAGAGAAGCGCAGAGCTTCACAGTTGTTCAAAACAGCTCTCGACTCGATTGATGGAATAACCGTAAGTTCCCTGGATGATGTCCCTGCTGGGCCTGTCACATCTTTCTTCAGATCTGTTAGAAACACCCTTGATTTTGATTTTGAAGACGAGAATTCAGGTCGTTGGACATCTAGTGACCCTCCATCTTTGTATATATTCATTAATTGTAGCACGCGTGAACTTGGTTTGATAGAGAAGTATGTGGAAACTTTTGCTTCGTCAATCCCCACCCTGTTGTTTAATCTAGAACTTGAAACCTTGCGTGCGGACTTGGGCTTACTGGGATTCCCCCCCAAAGATTTGCATTATCGATTTCTCTCTCAATTTATCCCAGTGTTCTATATTCGAATCAGAGAGTATTCTAAGACAGTAGCAGTAGCACCGTATATTGTTAATTACAGTGGAGCATTGTTTCGTCAATACCCTGGACCTTGGCAAGTGATGCTAAAACAATCAGATAATTCTTATGCTTGCGTTGCAGAGAGTGAGACAAGGTTCACCCTTGGTGAAACCAAAGATGAACTATTAAGGGTCCTTGGACTACAGGAAGAACAAGGAAGCTCACTAGAATTTCTCCGCAGGGGCTACAAGGCTGCCACTTGGTGGGAAGAAGATGTTGACTCTGAAGTATCTTCGGCATGGCGTAGTTGAGCACCTCTAGTGTCAATTATTTCCTCGTATTTTCGTAGACACAACGTTGATGACATCGGACACGAGATTTCAACTATATTTCCTTGATCAAACGGATGGCTTCTTTATAAAAGACTCTTATGGCTATCTTTGAAGAGTTACTGCAGGGAAATTCTATCTCAAAAGTTAAATCTACATCTCTTTTCAACCCACCAGCTTCAGAAGATTGACACAAACTTGAATCCAGCTCATTCACCTCTGGAATTCAAGGTGAAGTAATCTTGTACATTTTATAAGTCGCAGTAAATTACGATTTGTTGTTCATCCTTGATACTGAGTTTCTTTTTCTTTTTCACTCATGTTCCTTTAAAAAAGTATAAATCAGGCCTCTTAGATGGTTTAATCCTTGCCAAGTATGAAGTTCAACTATTTTCATGCAATATGTGGTTCATAACTGAGTTTTTTAACTGAATCCATAATATGTAGAACAATC

Coding sequence (CDS)

ATGGCGATCATGGCGTTTGTCTCTTCACCACCGCAAATTCCCTCTCTATCTCGATCGTTTCACAGCAACTTTCTCTTCTCTCCCATTTCCTCTTCCTTCTGCGCACTACGGCGTTCTACACGATCCAGCTTATTTGGCGCTCAAACTTTGGCAACTTCGGGATTTTGCTTTAGGATACACTGTCGTGACAAAGAACGAACTTCACCGGTTACTCAGAGCTCCGATCCTAAGGCTGGAGTTCCCATTTATAAGCCCAAAACCTACGAGGTCTTAGTCTCCGATGCTGCGAATTCTCTTGCTTATGCTCTGGAGGACGGAAAGATCCGCTTGGAGATTGATTTCCCACCCCTGCCTAGCAACATTTCTTCGTATAAGGGATCTTCAGATGAGTTCATTGATGCAAATATCCAACTTGCCCTGGCTGTTGCAAGGAATCTTCAAGAAAAGAGAGGAACTAGATCTTGCATTGTGTTTCCAGATAAGCCAGAGAAGCGCAGAGCTTCACAGTTGTTCAAAACAGCTCTCGACTCGATTGATGGAATAACCGTAAGTTCCCTGGATGATGTCCCTGCTGGGCCTGTCACATCTTTCTTCAGATCTGTTAGAAACACCCTTGATTTTGATTTTGAAGACGAGAATTCAGGTCGTTGGACATCTAGTGACCCTCCATCTTTGTATATATTCATTAATTGTAGCACGCGTGAACTTGGTTTGATAGAGAAGTATGTGGAAACTTTTGCTTCGTCAATCCCCACCCTGTTGTTTAATCTAGAACTTGAAACCTTGCGTGCGGACTTGGGCTTACTGGGATTCCCCCCCAAAGATTTGCATTATCGATTTCTCTCTCAATTTATCCCAGTGTTCTATATTCGAATCAGAGAGTATTCTAAGACAGTAGCAGTAGCACCGTATATTGTTAATTACAGTGGAGCATTGTTTCGTCAATACCCTGGACCTTGGCAAGTGATGCTAAAACAATCAGATAATTCTTATGCTTGCGTTGCAGAGAGTGAGACAAGGTTCACCCTTGGTGAAACCAAAGATGAACTATTAAGGGTCCTTGGACTACAGGAAGAACAAGGAAGCTCACTAGAATTTCTCCGCAGGGGCTACAAGGCTGCCACTTGGTGGGAAGAAGATGTTGACTCTGAAGTATCTTCGGCATGGCGTAGTTGA

Protein sequence

MAIMAFVSSPPQIPSLSRSFHSNFLFSPISSSFCALRRSTRSSLFGAQTLATSGFCFRIHCRDKERTSPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENSGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

Homology

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BLAST of Bhi09G000435 vs. TAIR 10
Match: AT1G73060.1 (Low PSII Accumulation 3 )

HSP 1 Score: 538.1 bits (1385), Expect = 5.8e-153
Identity = 262/353 (74.22%), Postives = 302/353 (85.55%), Query Frame = 0


Query: 43  SLFGAQTLATSGFCFRIHCRDKERT----SPVTQSSDPKAGVPIYKPKTYEVLVSDAANS 102
           +LF + ++ TS    RI C     +    S  + +SDP+ GVP+YKPK+YEVL +DAANS
Sbjct: 10  ALFSSPSILTS----RIRCGATANSGGAISSTSSNSDPRRGVPLYKPKSYEVLATDAANS 69

Query: 103 LAYALEDGKIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVF 162
           LA+AL+D K RLEIDFPPLPS+ISSYKGSSD+FIDANIQLA+ V R LQEK  TR+CIVF
Sbjct: 70  LAFALQDSKSRLEIDFPPLPSSISSYKGSSDDFIDANIQLAVTVVRKLQEKIETRACIVF 129

Query: 163 PDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENSGRWT 222
           PDKPEKRRASQ FK A DS+DGI++ SLDD+P   VT+FFRS+R+TLDFDFEDEN G W 
Sbjct: 130 PDKPEKRRASQRFKAAFDSVDGISIGSLDDIPGTSVTNFFRSIRSTLDFDFEDENEGTWE 189

Query: 223 SSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHY 282
             +PP+LYIFINCSTREL  IEK+VETFASS P LLFNLEL+TLRADLGLLGFPPKDLHY
Sbjct: 190 PKEPPTLYIFINCSTRELSFIEKFVETFASSTPALLFNLELDTLRADLGLLGFPPKDLHY 249

Query: 283 RFLSQFIPVFYIRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESE 342
           RFLSQFIPVFYIR REYSKTVAVAP+++NY+GALFRQYPGPWQVMLKQ+D S+ACVAES 
Sbjct: 250 RFLSQFIPVFYIRTREYSKTVAVAPFVLNYNGALFRQYPGPWQVMLKQTDGSFACVAESP 309

Query: 343 TRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 392
           TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRGYK+ATWWEEDV+ E SS WR+
Sbjct: 310 TRFTLGETKEELLQVLGLQEEKGSSLEFLRRGYKSATWWEEDVELEASSNWRN 358

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BLAST of Bhi09G000435 vs. TAIR 10
Match: AT5G48790.1 (Domain of unknown function (DUF1995) )

HSP 1 Score: 65.1 bits (157), Expect = 1.4e-10
Identity = 74/283 (26.15%), Postives = 127/283 (44.88%), Query Frame = 0


Query: 85  PKTYEVLVSDAANSLAYALEDGKIRLEIDFPPLPSNISSYKGSSD---EFIDANIQLALA 144
           P+ Y  L++ A  ++  AL+D K  +EI+FP   S ++S  G  +   E  ++   +   
Sbjct: 68  PRDYVELINQAKEAVEMALKDEKQLMEIEFP--TSGLASVPGDGEGATEMTESINMIREF 127

Query: 145 VARNLQEKRGTRSCIVFPDKPEKRRASQ-LFKTALDSIDGITVSSLDDVPAGPVTSFFRS 204
             R L  ++   + I FP+  E + A + +F      +D +T  SL +            
Sbjct: 128 CDRLLAPEKARSTRIFFPEANEVKFAQKTVFGGTYFKLDYLTKPSLFE------------ 187

Query: 205 VRNTLDFDFED--ENSGRWTSSDPPSLYIFINCSTRELGLIEK-YVETFASSIPTL-LFN 264
                DF F +  + + R    D   L  +   +  E+ ++E+ Y E   ++   L +FN
Sbjct: 188 -----DFGFFERVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVVNTDRKLIIFN 247

Query: 265 LELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKT----VAVAPYIVNY---- 324
            EL+ +R+     G+ PK             FY ++   +KT    +    YI N+    
Sbjct: 248 GELDRIRS-----GYYPK------------FFYPKLAALTKTLLPKMETVYYIHNFKGQK 307

Query: 325 SGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELL 352
            G LFR YPGPWQV L+++ N Y CV + E+  +L E   ++L
Sbjct: 308 GGVLFRCYPGPWQV-LRRTRNKYICVHQQESMPSLKEVALDIL 313

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BLAST of Bhi09G000435 vs. ExPASy Swiss-Prot
Match: Q8H0W0 (Protein LPA3 OS=Arabidopsis thaliana OX=3702 GN=LPA3 PE=1 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 8.2e-152
Identity = 262/353 (74.22%), Postives = 302/353 (85.55%), Query Frame = 0


Query: 43  SLFGAQTLATSGFCFRIHCRDKERT----SPVTQSSDPKAGVPIYKPKTYEVLVSDAANS 102
           +LF + ++ TS    RI C     +    S  + +SDP+ GVP+YKPK+YEVL +DAANS
Sbjct: 10  ALFSSPSILTS----RIRCGATANSGGAISSTSSNSDPRRGVPLYKPKSYEVLATDAANS 69

Query: 103 LAYALEDGKIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVF 162
           LA+AL+D K RLEIDFPPLPS+ISSYKGSSD+FIDANIQLA+ V R LQEK  TR+CIVF
Sbjct: 70  LAFALQDSKSRLEIDFPPLPSSISSYKGSSDDFIDANIQLAVTVVRKLQEKIETRACIVF 129

Query: 163 PDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENSGRWT 222
           PDKPEKRRASQ FK A DS+DGI++ SLDD+P   VT+FFRS+R+TLDFDFEDEN G W 
Sbjct: 130 PDKPEKRRASQRFKAAFDSVDGISIGSLDDIPGTSVTNFFRSIRSTLDFDFEDENEGTWE 189

Query: 223 SSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHY 282
             +PP+LYIFINCSTREL  IEK+VETFASS P LLFNLEL+TLRADLGLLGFPPKDLHY
Sbjct: 190 PKEPPTLYIFINCSTRELSFIEKFVETFASSTPALLFNLELDTLRADLGLLGFPPKDLHY 249

Query: 283 RFLSQFIPVFYIRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESE 342
           RFLSQFIPVFYIR REYSKTVAVAP+++NY+GALFRQYPGPWQVMLKQ+D S+ACVAES 
Sbjct: 250 RFLSQFIPVFYIRTREYSKTVAVAPFVLNYNGALFRQYPGPWQVMLKQTDGSFACVAESP 309

Query: 343 TRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 392
           TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRGYK+ATWWEEDV+ E SS WR+
Sbjct: 310 TRFTLGETKEELLQVLGLQEEKGSSLEFLRRGYKSATWWEEDVELEASSNWRN 358

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BLAST of Bhi09G000435 vs. ExPASy TrEMBL
Match: A0A5A7UU42 (Protein LOW PSII ACCUMULATION 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001640 PE=4 SV=1)

HSP 1 Score: 746.5 bits (1926), Expect = 5.6e-212
Identity = 375/391 (95.91%), Postives = 382/391 (97.70%), Query Frame = 0


Query: 1   MAIMAFVSSPPQIPSLSRSFHSNFLFSPISSSFCALRRSTRSSLFGAQTLATSGFCFRIH 60
           M IMAF+SSPP IPSLSR FHSNFLFSPISSS   LRRST SSLFGAQTLA SGFCFRIH
Sbjct: 1   MPIMAFLSSPPYIPSLSRPFHSNFLFSPISSS---LRRSTPSSLFGAQTLAASGFCFRIH 60

Query: 61  CRDKERTSPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKIRLEIDFPPLPSN 120
           CRDKER +PVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGK+RLEIDFPPLPSN
Sbjct: 61  CRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSN 120

Query: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDG 180
           ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRAS+LFKTA+DSIDG
Sbjct: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDG 180

Query: 181 ITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENSGRWTSSDPPSLYIFINCSTRELGLIE 240
           ITVSSLDDVPAGPVTSFFRSVRNTLDFDFED+N+GRWTSSDPPSLYIFINCSTRELGLIE
Sbjct: 181 ITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIE 240

Query: 241 KYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA 300
           KYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
Sbjct: 241 KYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA 300

Query: 301 VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360
           VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ
Sbjct: 301 VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360

Query: 361 GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 392
           GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Sbjct: 361 GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 388

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BLAST of Bhi09G000435 vs. ExPASy TrEMBL
Match: A0A1S3CFB8 (protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499841 PE=4 SV=1)

HSP 1 Score: 744.2 bits (1920), Expect = 2.8e-211
Identity = 374/391 (95.65%), Postives = 381/391 (97.44%), Query Frame = 0


Query: 1   MAIMAFVSSPPQIPSLSRSFHSNFLFSPISSSFCALRRSTRSSLFGAQTLATSGFCFRIH 60
           M IMAF+SSPP IPSLSR F SNFLFSPISSS   LRRST SSLFGAQTLA SGFCFRIH
Sbjct: 1   MPIMAFISSPPYIPSLSRPFQSNFLFSPISSS---LRRSTPSSLFGAQTLAASGFCFRIH 60

Query: 61  CRDKERTSPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKIRLEIDFPPLPSN 120
           CRDKER +PVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGK+RLEIDFPPLPSN
Sbjct: 61  CRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSN 120

Query: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDG 180
           ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRAS+LFKTA+DSIDG
Sbjct: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDG 180

Query: 181 ITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENSGRWTSSDPPSLYIFINCSTRELGLIE 240
           ITVSSLDDVPAGPVTSFFRSVRNTLDFDFED+N+GRWTSSDPPSLYIFINCSTRELGLIE
Sbjct: 181 ITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIE 240

Query: 241 KYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA 300
           KYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
Sbjct: 241 KYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA 300

Query: 301 VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360
           VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ
Sbjct: 301 VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360

Query: 361 GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 392
           GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Sbjct: 361 GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 388

[Close]

BLAST of Bhi09G000435 vs. ExPASy TrEMBL
Match: A0A6J1JTN7 (protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111488800 PE=4 SV=1)

HSP 1 Score: 742.3 bits (1915), Expect = 1.1e-210
Identity = 367/391 (93.86%), Postives = 381/391 (97.44%), Query Frame = 0


Query: 1   MAIMAFVSSPPQIPSLSRSFHSNFLFSPISSSFCALRRSTRSSLFGAQTLATSGFCFRIH 60
           MAIMAF+SSPP IPSL R FHSNFLFSPISSSF ALRRSTRSSLFGAQTLATSGFCFRIH
Sbjct: 1   MAIMAFLSSPPHIPSLVRPFHSNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIH 60

Query: 61  CRDKERTSPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKIRLEIDFPPLPSN 120
           C DKER +PVT+SSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGK+RLEIDFPPLPSN
Sbjct: 61  CSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSN 120

Query: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDG 180
           ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RASQLFKTALDSIDG
Sbjct: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSIDG 180

Query: 181 ITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENSGRWTSSDPPSLYIFINCSTRELGLIE 240
           IT+SSLDD+PAGPVTSFFRS+RNTLDFDFEDEN+GRWTSS+PPSLYIFINCSTREL +IE
Sbjct: 181 ITISSLDDIPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIE 240

Query: 241 KYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA 300
           KYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Sbjct: 241 KYVETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVP 300

Query: 301 VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360
           +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQ
Sbjct: 301 IAPYIVNYSGALFRQYPGPWQVMLKQTDNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360

Query: 361 GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 392
           GSSLEFLRRGYKAATWWEED DSEVSSAWRS
Sbjct: 361 GSSLEFLRRGYKAATWWEEDNDSEVSSAWRS 391

[Close]

BLAST of Bhi09G000435 vs. ExPASy TrEMBL
Match: A0A6J1GQW6 (protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456648 PE=4 SV=1)

HSP 1 Score: 741.5 bits (1913), Expect = 1.8e-210
Identity = 367/391 (93.86%), Postives = 381/391 (97.44%), Query Frame = 0


Query: 1   MAIMAFVSSPPQIPSLSRSFHSNFLFSPISSSFCALRRSTRSSLFGAQTLATSGFCFRIH 60
           MAIMAF+SSPP IPSL R FHSNFLFSPI+SSF ALRRSTRSSLFGAQTLATSGFCFRIH
Sbjct: 1   MAIMAFLSSPPHIPSLVRPFHSNFLFSPIASSFSALRRSTRSSLFGAQTLATSGFCFRIH 60

Query: 61  CRDKERTSPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKIRLEIDFPPLPSN 120
           C DKER +PVT+SSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGK+RLEIDFPPLPSN
Sbjct: 61  CSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSN 120

Query: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDG 180
           ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RASQLFKTALDSIDG
Sbjct: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSIDG 180

Query: 181 ITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENSGRWTSSDPPSLYIFINCSTRELGLIE 240
           IT+SSLDDVPAGPVTSFFRS+RNTLDFDFEDEN+GRWTSS+PPSLYIFINCSTREL +IE
Sbjct: 181 ITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIE 240

Query: 241 KYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA 300
           KYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Sbjct: 241 KYVETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVP 300

Query: 301 VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360
           +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQ
Sbjct: 301 IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360

Query: 361 GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 392
           GSSLEFLRRGYKAATWWEED DSEVSSAWRS
Sbjct: 361 GSSLEFLRRGYKAATWWEEDNDSEVSSAWRS 391

[Close]

BLAST of Bhi09G000435 vs. ExPASy TrEMBL
Match: A0A0A0KA03 (DUF1995 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G431980 PE=4 SV=1)

HSP 1 Score: 733.4 bits (1892), Expect = 4.9e-208
Identity = 370/391 (94.63%), Postives = 377/391 (96.42%), Query Frame = 0


Query: 1   MAIMAFVSSPPQIPSLSRSFHSNFLFSPISSSFCALRRSTRSSLFGAQTLATSGFCFRIH 60
           MAIMAF+SSPP IPSLS  FH+NFLFSPISSS   LRRSTRSSLFGAQTLA SGFCFRIH
Sbjct: 1   MAIMAFLSSPPHIPSLSPPFHTNFLFSPISSS---LRRSTRSSLFGAQTLAASGFCFRIH 60

Query: 61  CRDKERTSPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKIRLEIDFPPLPSN 120
           C DKER +PVTQ SDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGK+RLEIDFPPLPSN
Sbjct: 61  CLDKERAAPVTQRSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSN 120

Query: 121 ISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSIDG 180
           ISSYKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKPEKRRASQLFKTALDSIDG
Sbjct: 121 ISSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDG 180

Query: 181 ITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENSGRWTSSDPPSLYIFINCSTRELGLIE 240
           ITVSSLDDVPAG VTSFFRSVRNTLDFDFED+N+GRWTSSDPPSLYIFINCSTRELGLIE
Sbjct: 181 ITVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIE 240

Query: 241 KYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA 300
           KYVETFASSIP LLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
Sbjct: 241 KYVETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA 300

Query: 301 VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360
           VAPYIVNYSGALFRQY GPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ
Sbjct: 301 VAPYIVNYSGALFRQYAGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQ 360

Query: 361 GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 392
           GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Sbjct: 361 GSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 388

The following BLAST results are available for this feature:

BLAST of Bhi09G000435 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73060.1	5.8e-153	74.22	Low PSII Accumulation 3	[more]
AT5G48790.1	1.4e-10	26.15	Domain of unknown function (DUF1995)	[more]

BLAST of Bhi09G000435 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H0W0	8.2e-152	74.22	Protein LPA3 OS=Arabidopsis thaliana OX=3702 GN=LPA3 PE=1 SV=1	[more]

BLAST of Bhi09G000435 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UU42	5.6e-212	95.91	Protein LOW PSII ACCUMULATION 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CFB8	2.8e-211	95.65	protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1JTN7	1.1e-210	93.86	protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1GQW6	1.8e-210	93.86	protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A0A0KA03	4.9e-208	94.63	DUF1995 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G431980 PE=...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018962	Domain of unknown function DUF1995	PFAM	PF09353	DUF1995	coord: 85..347 e-value: 5.5E-50 score: 170.2
IPR044687	Protein LOW PSII ACCUMULATION 3	PANTHER	PTHR34051	PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC	coord: 49..391
None	No IPR available	PANTHER	PTHR34051:SF2	PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC	coord: 49..391

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi09M000435	Bhi09M000435	mRNA