Bhi09G000089 (gene) Wax gourd (B227) v1

Overview
NameBhi09G000089
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionAcyl-[acyl-carrier-protein] hydrolase
Locationchr9: 2246707 .. 2246997 (-)
RNA-Seq ExpressionBhi09G000089
SyntenyBhi09G000089
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAGTCTATCACTTCTTTGAATCAGAAAAAGAAAAGGTTTGTGAATATTATGGTTTCTTTCAGGGAACTCCTCGTTGGGTATCACAGAGTCATCAGTTGTCGGTTGTAATAATCAAATACCTTAAAGAATGTGGAGTAGACAAGCAATTACAATCTTTGTCTATGCCTATGGAAAACGGTGTTGTTTTGAATGGTAAAAAAGAAGACATCAAACTCCACCACTCTGTGATCACTGATGGAATTGAACTTGTTCGAGCAACGACTCTTTGGACACCAAAATCCATTTAA

mRNA sequence

ATGCGAGTCTATCACTTCTTTGAATCAGAAAAAGAAAAGGTTTGTGAATATTATGGTTTCTTTCAGGGAACTCCTCGTTGGGTATCACAGAGTCATCAGTTGTCGGTTGTAATAATCAAATACCTTAAAGAATGTGGAGTAGACAAGCAATTACAATCTTTGTCTATGCCTATGGAAAACGGTGTTGTTTTGAATGGTAAAAAAGAAGACATCAAACTCCACCACTCTGTGATCACTGATGGAATTGAACTTGTTCGAGCAACGACTCTTTGGACACCAAAATCCATTTAA

Coding sequence (CDS)

ATGCGAGTCTATCACTTCTTTGAATCAGAAAAAGAAAAGGTTTGTGAATATTATGGTTTCTTTCAGGGAACTCCTCGTTGGGTATCACAGAGTCATCAGTTGTCGGTTGTAATAATCAAATACCTTAAAGAATGTGGAGTAGACAAGCAATTACAATCTTTGTCTATGCCTATGGAAAACGGTGTTGTTTTGAATGGTAAAAAAGAAGACATCAAACTCCACCACTCTGTGATCACTGATGGAATTGAACTTGTTCGAGCAACGACTCTTTGGACACCAAAATCCATTTAA

Protein sequence

MRVYHFFESEKEKVCEYYGFFQGTPRWVSQSHQLSVVIIKYLKECGVDKQLQSLSMPMENGVVLNGKKEDIKLHHSVITDGIELVRATTLWTPKSI
Homology
BLAST of Bhi09G000089 vs. ExPASy Swiss-Prot
Match: Q9SQI3 (Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum OX=3635 GN=FATB1 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.8e-05
Identity = 26/81 (32.10%), Postives = 43/81 (53.09%), Query Frame = 0

Query: 16  EYYGF-FQGTPRWVSQSHQLSVVIIKYLKECGVDKQLQSLSMPMENGVVLNGKKEDIKLH 75
           +Y G+  +  P  + +SH+LS + ++Y +ECG D  LQSL+   ++         +    
Sbjct: 317 KYIGWILESAPLPILESHELSALTLEYRRECGRDSVLQSLTTVSDSNTENAVNVGEFNCQ 376

Query: 76  HSV-ITDGIELVRATTLWTPK 95
           H + + DG E+VR  T W PK
Sbjct: 377 HLLRLDDGAEIVRGRTRWRPK 397

BLAST of Bhi09G000089 vs. ExPASy TrEMBL
Match: A0A5A7UZ85 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002510 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.5e-22
Identity = 53/79 (67.09%), Postives = 66/79 (83.54%), Query Frame = 0

Query: 22  QGTPRWVSQSHQLSVVIIKYLKECGVDKQLQSLSMPMENGVVLNG----KKEDIKLHHSV 81
           +GTPRW+ +SH+LS V +KYLKECGVDK LQSLSMP++N V+ NG    K+  IKLHHS+
Sbjct: 282 EGTPRWMLESHRLSTVTVKYLKECGVDKILQSLSMPIQNDVISNGNYLVKENYIKLHHSI 341

Query: 82  ITDGIELVRATTLWTPKSI 97
           +++GIELVRATTLWTP SI
Sbjct: 342 VSEGIELVRATTLWTPYSI 360

BLAST of Bhi09G000089 vs. ExPASy TrEMBL
Match: A0A1S4E345 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis melo OX=3656 GN=LOC107991799 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.7e-21
Identity = 52/79 (65.82%), Postives = 65/79 (82.28%), Query Frame = 0

Query: 22  QGTPRWVSQSHQLSVVIIKYLKECGVDKQLQSLSMPMENGVVLNG----KKEDIKLHHSV 81
           +GTPRW+ +SH+LS V +KYLKECGVDK LQSLSMP++N V+ NG    K+  IKLHHS+
Sbjct: 62  EGTPRWMLESHRLSTVTVKYLKECGVDKILQSLSMPIQNDVISNGNSLVKENYIKLHHSI 121

Query: 82  ITDGIELVRATTLWTPKSI 97
           +++GIELVRATTLW P SI
Sbjct: 122 VSEGIELVRATTLWIPYSI 140

BLAST of Bhi09G000089 vs. ExPASy TrEMBL
Match: A0A0A0KAB7 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis sativus OX=3659 GN=Csa_7G440560 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.2e-20
Identity = 52/79 (65.82%), Postives = 63/79 (79.75%), Query Frame = 0

Query: 22  QGTPRWVSQSHQLSVVIIKYLKECGVDKQLQSLSMPMENGVVLNG----KKEDIKLHHSV 81
           +GTP WV +SH LS + IKYLKECGV K+LQSLSMP++N  V NG    ++  IKLHHSV
Sbjct: 62  EGTPGWVLESHWLSALTIKYLKECGVGKKLQSLSMPIQNDTVSNGNYLVRENFIKLHHSV 121

Query: 82  ITDGIELVRATTLWTPKSI 97
           +++GIELVRATTLWTP SI
Sbjct: 122 LSEGIELVRATTLWTPYSI 140

BLAST of Bhi09G000089 vs. ExPASy TrEMBL
Match: A0A6J1H8Q2 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111461080 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.0e-18
Identity = 51/77 (66.23%), Postives = 63/77 (81.82%), Query Frame = 0

Query: 22  QGTPRWVSQSHQLSVVIIKYLKECGVDKQLQSLSMPMENGVVLNG----KKEDIKLHHSV 81
           +GTPR V + +QLS + IKYLKEC VD+QLQSLS+P+EN VV NG    K +DIKLHHS+
Sbjct: 272 EGTPRSVLEKYQLSGITIKYLKECSVDQQLQSLSVPLENDVV-NGTPLIKDKDIKLHHSI 331

Query: 82  ITDGIELVRATTLWTPK 95
           ++DGIELVRA T+WTPK
Sbjct: 332 LSDGIELVRAKTVWTPK 347

BLAST of Bhi09G000089 vs. ExPASy TrEMBL
Match: A0A6J1KZF4 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111497736 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 4.0e-18
Identity = 49/76 (64.47%), Postives = 62/76 (81.58%), Query Frame = 0

Query: 22  QGTPRWVSQSHQLSVVIIKYLKECGVDKQLQSLSMPMENGVVLNG---KKEDIKLHHSVI 81
           +GTPR V +++QLS + IKYLKEC VD+QLQSLS+P+EN VV      K +DIKLHHS++
Sbjct: 272 EGTPRSVLENYQLSRITIKYLKECSVDQQLQSLSLPLENDVVNVTPLIKDKDIKLHHSIL 331

Query: 82  TDGIELVRATTLWTPK 95
           +DGIELVRA T+WTPK
Sbjct: 332 SDGIELVRAKTVWTPK 347

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Q9SQI34.8e-0532.10Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum... [more]
Match NameE-valueIdentityDescription
A0A5A7UZ853.5e-2267.09Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S4E3451.7e-2165.82Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis melo OX=3656 GN=LOC107991799 PE... [more]
A0A0A0KAB74.2e-2065.82Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis sativus OX=3659 GN=Csa_7G440560... [more]
A0A6J1H8Q21.0e-1866.23Acyl-[acyl-carrier-protein] hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111461... [more]
A0A6J1KZF44.0e-1864.47Acyl-[acyl-carrier-protein] hydrolase OS=Cucurbita maxima OX=3661 GN=LOC11149773... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.129.10Hotdog Thioesterasecoord: 13..96
e-value: 2.2E-9
score: 38.8
IPR002864Acyl-ACP thioesterasePFAMPF01643Acyl-ACP_TEcoord: 25..92
e-value: 3.0E-6
score: 26.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M000089Bhi09M000089mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
cellular_component GO:0009507 chloroplast
molecular_function GO:0016297 acyl-[acyl-carrier-protein] hydrolase activity
molecular_function GO:0016790 thiolester hydrolase activity