Bhi08G001851 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G001851
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	transcription factor TCP10-like
Location	chr8: 64193258 .. 64193850 (+)
RNA-Seq Expression	Bhi08G001851
Synteny	Bhi08G001851

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCTCAAAGGCTTTCTCTTAATGATGAGGATGAGAAGACGGCGAAGCTCGGCCGGAGAGACCGTCGCCTCCGTTCGAGCGCCGGCGCCGTTCCCGGCAAGGTTTACACCTCGAGAGGCCTCCGAGCGAGGAGGTTTCGGCTGTCGGCTCCGACTGCTATTGAATTCTACGACGTTCAGGATCGCCTTGGATTGGACCGACCAACTGAAACCATGGATTGGCTTCTTGAGAATGCCAAATCCGCCATTGATGCCCTTTCTCGACCATTAGAAACAGTGGACAGAGAGCTTAGAAAACAGATTTTCATCTCCCCTGTTCCTTCGTCTTCTTCCTCCCAGTTCCAGTCTTACCCACTTGAAAACTTCTCCCAAAAAGTTTGGTTTTTCCTTTTTAATTTTGTTTTCATTAGTTATACTTTTATTACAGTTGCTGGAAATAAAATTGTGTGATTCCGTAACAGGGTAACCTCGCTGTTTTCAGTCCGATGATTTTGAATGCCACGCCGGAGGAATTTTCCGGCATCCAGCCACCGGTTCCAAGTCAGAGCAATGTCGAAACTGGTTTTCTTTCCTTTCCGATCTGGGAATAG

mRNA sequence

ATGGGTTCTCAAAGGCTTTCTCTTAATGATGAGGATGAGAAGACGGCGAAGCTCGGCCGGAGAGACCGTCGCCTCCGTTCGAGCGCCGGCGCCGTTCCCGGCAAGGTTTACACCTCGAGAGGCCTCCGAGCGAGGAGGTTTCGGCTGTCGGCTCCGACTGCTATTGAATTCTACGACGTTCAGGATCGCCTTGGATTGGACCGACCAACTGAAACCATGGATTGGCTTCTTGAGAATGCCAAATCCGCCATTGATGCCCTTTCTCGACCATTAGAAACAGTGGACAGAGAGCTTAGAAAACAGATTTTCATCTCCCCTGTTCCTTCGTCTTCTTCCTCCCAGTTCCAGTCTTACCCACTTGAAAACTTCTCCCAAAAAGGTAACCTCGCTGTTTTCAGTCCGATGATTTTGAATGCCACGCCGGAGGAATTTTCCGGCATCCAGCCACCGGTTCCAAGTCAGAGCAATGTCGAAACTGGTTTTCTTTCCTTTCCGATCTGGGAATAG

Coding sequence (CDS)

ATGGGTTCTCAAAGGCTTTCTCTTAATGATGAGGATGAGAAGACGGCGAAGCTCGGCCGGAGAGACCGTCGCCTCCGTTCGAGCGCCGGCGCCGTTCCCGGCAAGGTTTACACCTCGAGAGGCCTCCGAGCGAGGAGGTTTCGGCTGTCGGCTCCGACTGCTATTGAATTCTACGACGTTCAGGATCGCCTTGGATTGGACCGACCAACTGAAACCATGGATTGGCTTCTTGAGAATGCCAAATCCGCCATTGATGCCCTTTCTCGACCATTAGAAACAGTGGACAGAGAGCTTAGAAAACAGATTTTCATCTCCCCTGTTCCTTCGTCTTCTTCCTCCCAGTTCCAGTCTTACCCACTTGAAAACTTCTCCCAAAAAGGTAACCTCGCTGTTTTCAGTCCGATGATTTTGAATGCCACGCCGGAGGAATTTTCCGGCATCCAGCCACCGGTTCCAAGTCAGAGCAATGTCGAAACTGGTTTTCTTTCCTTTCCGATCTGGGAATAG

Protein sequence

MGSQRLSLNDEDEKTAKLGRRDRRLRSSAGAVPGKVYTSRGLRARRFRLSAPTAIEFYDVQDRLGLDRPTETMDWLLENAKSAIDALSRPLETVDRELRKQIFISPVPSSSSSQFQSYPLENFSQKGNLAVFSPMILNATPEEFSGIQPPVPSQSNVETGFLSFPIWE

Homology

[Close]

BLAST of Bhi08G001851 vs. TAIR 10
Match: AT1G53230.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 )

HSP 1 Score: 79.7 bits (195), Expect = 2.4e-15
Identity = 41/71 (57.75%), Postives = 51/71 (71.83%), Query Frame = 0


Query: 19  GRRDRRLRSSAGAVPGKVYTSRGLRARRFRLSAPTAIEFYDVQDRLGLDRPTETMDWLLE 78
           GR+DR           KV T++G R RR RLSAPTAI+FYDVQDRLG DRP++ +DWL+ 
Sbjct: 48  GRKDRH---------SKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLIT 107

Query: 79  NAKSAIDALSR 90
            AKSAID L++
Sbjct: 108 KAKSAIDDLAQ 109

[Close]

BLAST of Bhi08G001851 vs. TAIR 10
Match: AT2G31070.1 (TCP domain protein 10 )

HSP 1 Score: 77.8 bits (190), Expect = 9.3e-15
Identity = 46/98 (46.94%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 19  GRRDRRLRSSAGAVPGKVYTSRGLRARRFRLSAPTAIEFYDVQDRLGLDRPTETMDWLLE 78
           GR+DR           KV+TS+G R RR RLSA TAI+FYDVQDRLG DRP++ +DWL++
Sbjct: 28  GRKDRH---------SKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIK 87

Query: 79  NAKSAIDALSRPLETVDRELRKQIFISPVPSSSSSQFQ 117
            AK+AID L   L        +Q  ++  P S +  FQ
Sbjct: 88  KAKTAIDKLE--LGETTTTTTRQEPVNTKPESPTLVFQ 114

[Close]

BLAST of Bhi08G001851 vs. TAIR 10
Match: AT3G15030.1 (TCP family transcription factor 4 )

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13
Identity = 47/116 (40.52%), Postives = 63/116 (54.31%), Query Frame = 0


Query: 19  GRRDRRLRSSAGAVPGKVYTSRGLRARRFRLSAPTAIEFYDVQDRLGLDRPTETMDWLLE 78
           GR+DR           KV T++G R RR RLSA TAI+FYDVQDRLG DRP++ +DWL++
Sbjct: 44  GRKDRH---------SKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIK 103

Query: 79  NAKSAIDALS-----RPLETV--------DRELRKQIFISPVPSSSSSQFQSYPLE 122
            AK++ID L+      P + +         R    +  ISP P     Q Q   L+
Sbjct: 104 KAKTSIDELAELPPWNPADAIRLAAANAKPRRTTAKTQISPSPPPPQQQQQQQQLQ 150

[Close]

BLAST of Bhi08G001851 vs. TAIR 10
Match: AT3G15030.2 (TCP family transcription factor 4 )

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13
Identity = 47/116 (40.52%), Postives = 63/116 (54.31%), Query Frame = 0


Query: 19  GRRDRRLRSSAGAVPGKVYTSRGLRARRFRLSAPTAIEFYDVQDRLGLDRPTETMDWLLE 78
           GR+DR           KV T++G R RR RLSA TAI+FYDVQDRLG DRP++ +DWL++
Sbjct: 44  GRKDRH---------SKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIK 103

Query: 79  NAKSAIDALS-----RPLETV--------DRELRKQIFISPVPSSSSSQFQSYPLE 122
            AK++ID L+      P + +         R    +  ISP P     Q Q   L+
Sbjct: 104 KAKTSIDELAELPPWNPADAIRLAAANAKPRRTTAKTQISPSPPPPQQQQQQQQLQ 150

[Close]

BLAST of Bhi08G001851 vs. TAIR 10
Match: AT3G15030.3 (TCP family transcription factor 4 )

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13
Identity = 47/116 (40.52%), Postives = 63/116 (54.31%), Query Frame = 0


Query: 19  GRRDRRLRSSAGAVPGKVYTSRGLRARRFRLSAPTAIEFYDVQDRLGLDRPTETMDWLLE 78
           GR+DR           KV T++G R RR RLSA TAI+FYDVQDRLG DRP++ +DWL++
Sbjct: 44  GRKDRH---------SKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIK 103

Query: 79  NAKSAIDALS-----RPLETV--------DRELRKQIFISPVPSSSSSQFQSYPLE 122
            AK++ID L+      P + +         R    +  ISP P     Q Q   L+
Sbjct: 104 KAKTSIDELAELPPWNPADAIRLAAANAKPRRTTAKTQISPSPPPPQQQQQQQQLQ 150

[Close]

BLAST of Bhi08G001851 vs. ExPASy Swiss-Prot
Match: A2WV68 (Transcription factor PCF7 OS=Oryza sativa subsp. indica OX=39946 GN=PCF7 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.6e-14
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 23  RRLRSSAGAVP--GKVYTSRGLRARRFRLSAPTAIEFYDVQDRLGLDRPTETMDWLLENA 82
           R +RS+AG      KV T+RGLR RR RL+A TAI FYDVQDRLG DRP++ +DWL+ NA
Sbjct: 132 RIVRSAAGRKDRHSKVCTARGLRDRRVRLAAHTAIRFYDVQDRLGYDRPSKAVDWLMRNA 191

Query: 83  KSAIDAL 88
           K+AID L
Sbjct: 192 KAAIDEL 198

[Close]

BLAST of Bhi08G001851 vs. ExPASy Swiss-Prot
Match: Q8LT05 (Transcription factor PCF7 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF7 PE=2 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 2.6e-14
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 23  RRLRSSAGAVP--GKVYTSRGLRARRFRLSAPTAIEFYDVQDRLGLDRPTETMDWLLENA 82
           R +RS+AG      KV T+RGLR RR RL+A TAI FYDVQDRLG DRP++ +DWL+ NA
Sbjct: 132 RIVRSAAGRKDRHSKVCTARGLRDRRVRLAAHTAIRFYDVQDRLGYDRPSKAVDWLMRNA 191

Query: 83  KSAIDAL 88
           K+AID L
Sbjct: 192 KAAIDEL 198

[Close]

BLAST of Bhi08G001851 vs. ExPASy Swiss-Prot
Match: A2ZMR9 (Transcription factor PCF8 OS=Oryza sativa subsp. indica OX=39946 GN=PCF8 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.6e-14
Identity = 43/79 (54.43%), Postives = 54/79 (68.35%), Query Frame = 0


Query: 11  EDEKTAKLGRRDRRLRSSAGAVP--GKVYTSRGLRARRFRLSAPTAIEFYDVQDRLGLDR 70
           E   TA   R  R  R++AG      KV TSRGLR RR RLS PTAI FYD+QDRLG+D+
Sbjct: 26  ESAATAAAWRTSRVARAAAGGKDRHSKVVTSRGLRDRRVRLSVPTAIAFYDIQDRLGVDQ 85

Query: 71  PTETMDWLLENAKSAIDAL 88
           P++ ++WL+  A +AIDAL
Sbjct: 86  PSKAIEWLIRAAAAAIDAL 104

[Close]

BLAST of Bhi08G001851 vs. ExPASy Swiss-Prot
Match: Q9MAH8 (Transcription factor TCP3 OS=Arabidopsis thaliana OX=3702 GN=TCP3 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.4e-14
Identity = 41/71 (57.75%), Postives = 51/71 (71.83%), Query Frame = 0


Query: 19  GRRDRRLRSSAGAVPGKVYTSRGLRARRFRLSAPTAIEFYDVQDRLGLDRPTETMDWLLE 78
           GR+DR           KV T++G R RR RLSAPTAI+FYDVQDRLG DRP++ +DWL+ 
Sbjct: 48  GRKDRH---------SKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLIT 107

Query: 79  NAKSAIDALSR 90
            AKSAID L++
Sbjct: 108 KAKSAIDDLAQ 109

[Close]

BLAST of Bhi08G001851 vs. ExPASy Swiss-Prot
Match: Q2QM59 (Transcription factor PCF8 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF8 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.5e-14
Identity = 42/75 (56.00%), Postives = 53/75 (70.67%), Query Frame = 0


Query: 15  TAKLGRRDRRLRSSAGAVP--GKVYTSRGLRARRFRLSAPTAIEFYDVQDRLGLDRPTET 74
           TA   R  R  R++AG      KV TSRGLR RR RLS PTAI FYD+QDRLG+D+P++ 
Sbjct: 30  TAAAWRTSRVARAAAGGKDRHSKVVTSRGLRDRRVRLSVPTAIAFYDIQDRLGVDQPSKA 89

Query: 75  MDWLLENAKSAIDAL 88
           ++WL+  A +AIDAL
Sbjct: 90  IEWLIRAAAAAIDAL 104

[Close]

BLAST of Bhi08G001851 vs. ExPASy TrEMBL
Match: A0A5A7UTZ9 (Transcription factor TCP10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002100 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.3e-59
Identity = 123/163 (75.46%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 7   SLNDEDEKTAKLGRRDRRLRSSAGAVPGKVYTSRGLRARRFRLSAPTAIEFYDVQDRLGL 66
           SL+D D+K AK+GRR+RRL SSAGA  GKVYTS+GLRARR RLSAPTAI+FYD+QDRLG 
Sbjct: 3   SLDDHDKKKAKIGRRNRRLCSSAGAGAGKVYTSKGLRARRLRLSAPTAIKFYDLQDRLGC 62

Query: 67  DRPTETMDWLLENAKSAIDALSRPLETVDRELRKQIFISPVP-SSSSSQFQSYPLENFSQ 126
            RPTE +DWLL+NAK AIDALSRPL+T D + RKQIF  PVP SSSSSQFQSYPL+NFSQ
Sbjct: 63  GRPTEAIDWLLQNAKPAIDALSRPLQTEDNDCRKQIFSLPVPSSSSSSQFQSYPLQNFSQ 122

Query: 127 KGNLAVFSPMILNATPEEFSGIQPPVPSQSNVETGFLSFPIWE 169
           KGNL+VFSPMILN T   FSG QPP PSQSNV  GF  FP+WE
Sbjct: 123 KGNLSVFSPMILNVTTAGFSGTQPPCPSQSNVGAGFPFFPMWE 165

[Close]

BLAST of Bhi08G001851 vs. ExPASy TrEMBL
Match: A0A1S3B7T4 (transcription factor TCP10-like OS=Cucumis melo OX=3656 GN=LOC103486739 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.3e-59
Identity = 123/163 (75.46%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 7   SLNDEDEKTAKLGRRDRRLRSSAGAVPGKVYTSRGLRARRFRLSAPTAIEFYDVQDRLGL 66
           SL+D D+K AK+GRR+RRL SSAGA  GKVYTS+GLRARR RLSAPTAI+FYD+QDRLG 
Sbjct: 3   SLDDHDKKKAKIGRRNRRLCSSAGAGAGKVYTSKGLRARRLRLSAPTAIKFYDLQDRLGC 62

Query: 67  DRPTETMDWLLENAKSAIDALSRPLETVDRELRKQIFISPVP-SSSSSQFQSYPLENFSQ 126
            RPTE +DWLL+NAK AIDALSRPL+T D + RKQIF  PVP SSSSSQFQSYPL+NFSQ
Sbjct: 63  GRPTEAIDWLLQNAKPAIDALSRPLQTEDNDCRKQIFSLPVPSSSSSSQFQSYPLQNFSQ 122

Query: 127 KGNLAVFSPMILNATPEEFSGIQPPVPSQSNVETGFLSFPIWE 169
           KGNL+VFSPMILN T   FSG QPP PSQSNV  GF  FP+WE
Sbjct: 123 KGNLSVFSPMILNVTTAGFSGTQPPCPSQSNVGAGFPFFPMWE 165

[Close]

BLAST of Bhi08G001851 vs. ExPASy TrEMBL
Match: A0A0A0LUP1 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G077150 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 8.4e-56
Identity = 120/172 (69.77%), Postives = 135/172 (78.49%), Query Frame = 0


Query: 7   SLNDEDEKTAKLGRRDRRLRSS--AGAVPGKVYTSRGLRARRFRLSAPTAIEFYDVQDRL 66
           SL+D D+ T K+ RR+RRL S+  AGA  GKVYTS+GLRARR RLSAPTAI+FYD+QDRL
Sbjct: 3   SLHDHDKNTTKIARRNRRLSSTADAGAGVGKVYTSKGLRARRLRLSAPTAIKFYDLQDRL 62

Query: 67  GLDRPTETMDWLLENAKSAIDALSRPLETVDRELRKQIFISPVP--------SSSSSQFQ 126
           G  RPTE +DWLL NAKSAIDALSRPL+T D + RKQ F  PVP        SSSSSQFQ
Sbjct: 63  GCGRPTEAIDWLLLNAKSAIDALSRPLQTEDNDCRKQSFSLPVPSSSSSSSSSSSSSQFQ 122

Query: 127 SYPLENFSQKGNLAVFSPMILNATPEEFSGIQPPVPSQSNVETGFLSFPIWE 169
           SYPL+NFSQKGNL+VF PMILNAT  EFSG QPP PSQSN+  GF  FP+WE
Sbjct: 123 SYPLQNFSQKGNLSVFCPMILNATTGEFSGTQPPCPSQSNIGAGFPFFPMWE 174

[Close]

BLAST of Bhi08G001851 vs. ExPASy TrEMBL
Match: A0A6J1KM30 (transcription factor PCF8-like OS=Cucurbita maxima OX=3661 GN=LOC111495803 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 8.4e-48
Identity = 104/148 (70.27%), Postives = 120/148 (81.08%), Query Frame = 0


Query: 22  DRRLRSSAGAVPGKVYTSRGLRARRFRLSAPTAIEFYDVQDRLGLDRPTETMDWLLENAK 81
           +RRLRSSAG+  GKVYTS+GLRARR RLSAPTAI+FYD+QDRLG +RPTE +DWLL+NAK
Sbjct: 3   ERRLRSSAGS--GKVYTSKGLRARRLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAK 62

Query: 82  SAIDALSRPLETVDRELRKQIFISPVP-SSSSSQFQSYPLENFSQKGNLAVFSPMILNAT 141
           SAIDALSRPLET D +       S VP SSSSSQF +YPLENF + GNL+V SPMI+N T
Sbjct: 63  SAIDALSRPLETEDGKRSFPSMASSVPSSSSSSQFLAYPLENFFRNGNLSVLSPMIMNVT 122

Query: 142 PEEFSGIQPPVPSQSNVETGFLSFPIWE 169
           P EFSG+QPP  SQSN  +G  SFP+WE
Sbjct: 123 PAEFSGMQPPCLSQSNATSGLPSFPMWE 148

[Close]

BLAST of Bhi08G001851 vs. ExPASy TrEMBL
Match: A0A6J5UKD4 (TCP domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS25215 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.2e-15
Identity = 42/56 (75.00%), Postives = 50/56 (89.29%), Query Frame = 0


Query: 35  KVYTSRGLRARRFRLSAPTAIEFYDVQDRLGLDRPTETMDWLLENAKSAIDALSRP 91
           KVYTS+G R RRFRLSAPTAI+FYDVQDRLG DRP++ +DWL+E AK+AI+ALS P
Sbjct: 119 KVYTSKGPRDRRFRLSAPTAIQFYDVQDRLGYDRPSKAIDWLIEKAKAAIEALSEP 174

The following BLAST results are available for this feature:

BLAST of Bhi08G001851 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53230.1	2.4e-15	57.75	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3	[more]
AT2G31070.1	9.3e-15	46.94	TCP domain protein 10	[more]
AT3G15030.1	1.0e-13	40.52	TCP family transcription factor 4	[more]
AT3G15030.2	1.0e-13	40.52	TCP family transcription factor 4	[more]
AT3G15030.3	1.0e-13	40.52	TCP family transcription factor 4	[more]

BLAST of Bhi08G001851 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2WV68	2.6e-14	62.69	Transcription factor PCF7 OS=Oryza sativa subsp. indica OX=39946 GN=PCF7 PE=4 SV...	[more]
Q8LT05	2.6e-14	62.69	Transcription factor PCF7 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF7 PE=2 ...	[more]
A2ZMR9	2.6e-14	54.43	Transcription factor PCF8 OS=Oryza sativa subsp. indica OX=39946 GN=PCF8 PE=4 SV...	[more]
Q9MAH8	3.4e-14	57.75	Transcription factor TCP3 OS=Arabidopsis thaliana OX=3702 GN=TCP3 PE=1 SV=1	[more]
Q2QM59	4.5e-14	56.00	Transcription factor PCF8 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF8 PE=2 ...	[more]

BLAST of Bhi08G001851 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UTZ9	1.3e-59	75.46	Transcription factor TCP10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3B7T4	1.3e-59	75.46	transcription factor TCP10-like OS=Cucumis melo OX=3656 GN=LOC103486739 PE=4 SV=...	[more]
A0A0A0LUP1	8.4e-56	69.77	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G077150 PE=4 SV...	[more]
A0A6J1KM30	8.4e-48	70.27	transcription factor PCF8-like OS=Cucurbita maxima OX=3661 GN=LOC111495803 PE=4 ...	[more]
A0A6J5UKD4	3.2e-15	75.00	TCP domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS25215 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 35..98 e-value: 3.5E-20 score: 73.1
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 20..87 score: 23.230671
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..28
None	No IPR available	PANTHER	PTHR31072:SF136	TRANSCRIPTION FACTOR TCP10	coord: 35..93
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 35..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M001851	Bhi08M001851	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000032	regulation of secondary shoot formation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding