Bhi08G001634 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G001634
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	UPF0426 protein At1g28150, chloroplastic
Location	chr8: 57872267 .. 57874917 (-)
RNA-Seq Expression	Bhi08G001634
Synteny	Bhi08G001634

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTGACATAGGTAACCCAACGCCAATGGTAGCCAAGTTAAATGTAGATTAAAAAGACGATGGACATGTGCCTGTTTCTCGAAATGTTTGGTCAATTGCAAGAAGAAAACAAGCGAATTGAAGACATTGTCTCAACTGGAACGCAATATCTTCATCGTCTTCTTCCGTCTCCAGTCAATCAGAAGCAGCTCTGCTCCATTGGCATCGTCAGAGATTACCCATGGCCGCTCTTCTTCTTCACTCCTCTTCGGCTACGAGCGTTCTGGTATGCCCATCTCTACAGTCTTTAATTGCTTTCGCTCTTTTCTATAACTTCCCTCTTATTTCTCTTCTTCGATGTTCTCCATTTTCCTCTTTGATTCTATTGAAAGTTTGGAGAAATGGGGAAATTAAAGGGACGGAATCATCATTCCATTTTATCATCCGACAAACCTGTGCGTGGTAACTTTCTTCGTCTCCGCTGCAACAATCCTACAAATGGCATCTCTGCATTTTTCTTCAATCCAGTTGAGGATCCCGTTCTCAAAGAAGCTCTTAAGGTATTCAATTACCTCTTACATCAAAAAACCTTCCTGGGTTTTGGCTGTTGTGTTGATTCGCTTAGTTTCTACTGGATTAAGGTCTTGATTAATGAGTATGTTCAAAATATGGAGGATTCAATTAATTTCCCATTGTATTCCCAAAGCACTTAAAAGACAGATTTACTTTGATAACCAATTGCCTTTTCGAGTAGAGTTACAAATATGGCCTACAAGTGCGAGTTAGGGTAGATGGATGGATGGATCTAAATTTTTTCTAGTCATGTCATGTCATGTTGAAACTAATAGAACTATGCAGGACCATGGGGAAGATTTTTACAGTATAAGACACTCAAGTTAACCATTCCATCTCTCTGACTCTGATGACAACGACTGCATAACATAAGTATTCTTGAGTCAACTTTTATAATCTGCAAACAATAATCTCGAACTAACTTCAAAGGAGAAAAAAATGCCTTTATGATCTGGAAGGTTGTTTATCGAGGAAATTGTATAAAGATGTTTATAATTTATAAACTCTAAGCAAAAGAGAACTTCGACCACACTCCTCACTCCTAGGGGGCGGGGAGTAATGCTCACTTTAAAGAAAATTTTGGCAATTTAGTATTTTCTCATCTAGAGGATATTAAGTTGGCATCACTTTCACAAATCCTTTAAACCATGCTTTTCACATTCATGAATCTATATTGGTTACCTTACTGTAGAACCAAAATCCTAGAGGATGAAGATAATAAGACAGGTTGTTGTATTGGTTTCTTTGTTTCCTGCTACCTCAGTGTGACAGAGCATTCACAGATGAAGCTAAAAAGTATACGCCACTCTGGCTACTTATCTCCGAGAAAAAACCTCCTCTTATAAAGTTTACTTGATTCATACTACACAAAAGACTGAAACTAAACACTTTTTACCGTACACCGGCCCCTGCTCTGATTTTCCCCTTGGGTTGTGCCACTATACTACTCGGTATTAAAATTCTACCCATCAATGAAATCTAAGTAGAAACTGCCCCAATGGATGCCCACAAGATTAATGAGTCCTGTTCTGGCTGAAAGAATCCAGTGTTGGTGCTTATACACATTTGGTTCTTGCTGATATGTCAGGATACTATTTAAATTGTTTTGAGTTTGGATAACTTCTTCTGATTCTTTCCTTGTTGTTTTGTAAGATTAAAATTTGCTAGAAACCTTATCAACATCTCATCTCTAAGACTCATCATTGTCACCATGTTGCATTTGCTTTCACACTCGTGATATTGCTGAACTGACGGTTGGCAAAAGGCTCATTTGAGATACTGGACGTATTTTGATTGACTTTTTAAGTGCTTAAACAATCCAAACAAGCCTATAATGTTGGTTGTTTCCAAAATTCTCACTGCTATGGAGACTGCTGAAGCCAAAAGTAAATGTTACTTTCCTATGCCAAATACATTTCCATAGAATTGAAGCAGTCCCAATCACTCGTTGCGACTGAATGTTTGAGTGTCTATTGGTTTTTCATCATTTATTACTAAATAAGCAATCTCAGTTCAAATTCTTACCGTTGCATTAGGATTCTTTGTTGGTATGGTTCCTTCCGAACTATATAAAATAAGATGTTGAGGCTTTGATTAGCTGGGAAGCATGAATTCTTTAGATGAAAACACTCACTTTAATAACTTTGATTTGCCCTTGTCTTTTGTAGTTCATATCAAAGATATCATGTGAAAGTAAAGTAATTTGAACTGTTGTAGGAGCCAGTGGCCTTTGCAGGTGGGCTATTTGCTGGACTTCTAAGGCTTGATTTAAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACGGTGGAATCAGCTGGACTCACGGAAGAAATTGATACTCAAGGATCTGTACAAGAGGATGGTCCAACCGAGATCGAGATCGAATAATCCCATCAATATGGACCTAACCTCCTACAGTTTGTTCTTATTTATTCCAATAATATATACCGATGGAAAAGTGGGGATGAAATGATATTAAATTTGATTTAGTATTACTACAGCTCCCTTGATTTCAAACAAGAAGTGAATTTCAATTAGGAGTTGACCATTTTTCGTATCCCAAAATTCTTCTACTTTTTTTTCTTGATTTAGGAGG

mRNA sequence

TTTTTGACATAGGTAACCCAACGCCAATGGTAGCCAAGTTAAATGTAGATTAAAAAGACGATGGACATGTGCCTGTTTCTCGAAATGTTTGGTCAATTGCAAGAAGAAAACAAGCGAATTGAAGACATTGTCTCAACTGGAACGCAATATCTTCATCGTCTTCTTCCGTCTCCAGTCAATCAGAAGCAGCTCTGCTCCATTGGCATCGTCAGAGATTACCCATGGCCGCTCTTCTTCTTCACTCCTCTTCGGCTACGAGCGTTCTGTTTGGAGAAATGGGGAAATTAAAGGGACGGAATCATCATTCCATTTTATCATCCGACAAACCTGTGCGTGGTAACTTTCTTCGTCTCCGCTGCAACAATCCTACAAATGGCATCTCTGCATTTTTCTTCAATCCAGTTGAGGATCCCGTTCTCAAAGAAGCTCTTAAGGAGCCAGTGGCCTTTGCAGGTGGGCTATTTGCTGGACTTCTAAGGCTTGATTTAAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACGGTGGAATCAGCTGGACTCACGGAAGAAATTGATACTCAAGGATCTGTACAAGAGGATGGTCCAACCGAGATCGAGATCGAATAATCCCATCAATATGGACCTAACCTCCTACAGTTTGTTCTTATTTATTCCAATAATATATACCGATGGAAAAGTGGGGATGAAATGATATTAAATTTGATTTAGTATTACTACAGCTCCCTTGATTTCAAACAAGAAGTGAATTTCAATTAGGAGTTGACCATTTTTCGTATCCCAAAATTCTTCTACTTTTTTTTCTTGATTTAGGAGG

Coding sequence (CDS)

ATGGCCGCTCTTCTTCTTCACTCCTCTTCGGCTACGAGCGTTCTGTTTGGAGAAATGGGGAAATTAAAGGGACGGAATCATCATTCCATTTTATCATCCGACAAACCTGTGCGTGGTAACTTTCTTCGTCTCCGCTGCAACAATCCTACAAATGGCATCTCTGCATTTTTCTTCAATCCAGTTGAGGATCCCGTTCTCAAAGAAGCTCTTAAGGAGCCAGTGGCCTTTGCAGGTGGGCTATTTGCTGGACTTCTAAGGCTTGATTTAAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACGGTGGAATCAGCTGGACTCACGGAAGAAATTGATACTCAAGGATCTGTACAAGAGGATGGTCCAACCGAGATCGAGATCGAATAA

Protein sequence

MAALLLHSSSATSVLFGEMGKLKGRNHHSILSSDKPVRGNFLRLRCNNPTNGISAFFFNPVEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEIDTQGSVQEDGPTEIEIE

Homology

[Close]

BLAST of Bhi08G001634 vs. TAIR 10
Match: AT1G28150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 96 Blast hits to 96 proteins in 44 species: Archae - 0; Bacteria - 56; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 99.4 bits (246), Expect = 2.3e-21
Identity = 56/112 (50.00%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 20  GKLKGRNHHSILSSDKPVRGNFLRLRCNNPTNGISAFFFNPVEDPVLKEALKEPVAFAGG 79
           G +  + HH   S+   V+ N L  R    T    +  FN  ++P+L EALKEP+AF GG
Sbjct: 14  GVVVSQLHHHQFSAG--VKSNELWFRPTRRTLISKSSCFNLPQEPILSEALKEPIAFLGG 73

Query: 80  LFAGLLRLDLNEDPLKEWVKKTVESAGLT-EEIDTQGSV--QEDGPTEIEIE 129
           +FAGLLRLDLNE+PLK+WV +TVE++G+T EE+D  G V   ED P +IEIE
Sbjct: 74  MFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDADGVVSNDEDSPQQIEIE 123

[Close]

BLAST of Bhi08G001634 vs. ExPASy Swiss-Prot
Match: Q9FZ89 (UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g28150 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.2e-20
Identity = 56/112 (50.00%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 20  GKLKGRNHHSILSSDKPVRGNFLRLRCNNPTNGISAFFFNPVEDPVLKEALKEPVAFAGG 79
           G +  + HH   S+   V+ N L  R    T    +  FN  ++P+L EALKEP+AF GG
Sbjct: 14  GVVVSQLHHHQFSAG--VKSNELWFRPTRRTLISKSSCFNLPQEPILSEALKEPIAFLGG 73

Query: 80  LFAGLLRLDLNEDPLKEWVKKTVESAGLT-EEIDTQGSV--QEDGPTEIEIE 129
           +FAGLLRLDLNE+PLK+WV +TVE++G+T EE+D  G V   ED P +IEIE
Sbjct: 74  MFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDADGVVSNDEDSPQQIEIE 123

[Close]

BLAST of Bhi08G001634 vs. ExPASy Swiss-Prot
Match: P74786 (UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=ssl0294 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-06
Identity = 27/67 (40.30%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 64  PVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTE--EIDTQGSVQEDG 123
           PV +E  ++P+AFAGG  +G+LRL L +DPLK+W++K     G+T+    D   + Q++ 
Sbjct: 8   PVTRELCQQPIAFAGGFVSGVLRLKLTDDPLKKWLQK----QGVTDFSGADINQTAQDNR 67

Query: 124 PTEIEIE 129
           P  I+I+
Sbjct: 68  PQSIDID 70

[Close]

BLAST of Bhi08G001634 vs. ExPASy Swiss-Prot
Match: Q8YQ06 (UPF0426 protein asl4034 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=asl4034 PE=3 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 9.3e-04
Identity = 20/65 (30.77%), Postives = 36/65 (55.38%), Query Frame = 0


Query: 64  PVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEIDTQGSVQEDGPT 123
           P+ K+ ++ P +F GG  +G+LRL+L +DP+K W+ K       +  +    + +  GP 
Sbjct: 8   PIFKQLVQHPASFLGGFASGVLRLNLADDPVKSWLDKQRGVNSYSFPVTDAHNGKASGPQ 67

Query: 124 EIEIE 129
            I I+
Sbjct: 68  SISID 72

[Close]

BLAST of Bhi08G001634 vs. ExPASy TrEMBL
Match: A0A5D3BGH6 (UPF0426 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00680 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.4e-57
Identity = 116/128 (90.62%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 1   MAALLLHSSSATSVLFGEMGKLKGRNHHSILSSDKPVRGNFLRLRCNNPTNGISAFFFNP 60
           MAALLLHSSS  SVLFGEMGKLK R+HHSILSS KP+R +FLRL  NN TNGISAFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60

Query: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEIDTQGSVQED 120
           VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEE+DTQGSVQED
Sbjct: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of Bhi08G001634 vs. ExPASy TrEMBL
Match: A0A1S3AZP7 (UPF0426 protein At1g28150, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484480 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.4e-57
Identity = 116/128 (90.62%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 1   MAALLLHSSSATSVLFGEMGKLKGRNHHSILSSDKPVRGNFLRLRCNNPTNGISAFFFNP 60
           MAALLLHSSS  SVLFGEMGKLK R+HHSILSS KP+R +FLRL  NN TNGISAFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60

Query: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEIDTQGSVQED 120
           VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEE+DTQGSVQED
Sbjct: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of Bhi08G001634 vs. ExPASy TrEMBL
Match: A0A0A0LT92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032470 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.4e-56
Identity = 115/128 (89.84%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 1   MAALLLHSSSATSVLFGEMGKLKGRNHHSILSSDKPVRGNFLRLRCNNPTNGISAFFFNP 60
           MAALLLHSSS  SVLFGEMGKLKGRNH+SILSS KPVR +F RL  NN TNGISAFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60

Query: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEIDTQGSVQED 120
           V DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL EE+DTQGSVQED
Sbjct: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of Bhi08G001634 vs. ExPASy TrEMBL
Match: A0A6J1E8W6 (UPF0426 protein At1g28150, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431718 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 8.9e-50
Identity = 103/128 (80.47%), Postives = 110/128 (85.94%), Query Frame = 0


Query: 1   MAALLLHSSSATSVLFGEMGKLKGRNHHSILSSDKPVRGNFLRLRCNNPTNGISAFFFNP 60
           MA LLLHSSS  SVL G MGK +  N HSI S  KP+R N LRL C+N TNGI AF FNP
Sbjct: 1   MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNP 60

Query: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEIDTQGSVQED 120
           +EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+TEE+DTQGSVQED
Sbjct: 61  LEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of Bhi08G001634 vs. ExPASy TrEMBL
Match: A0A6J1KGM3 (UPF0426 protein At1g28150, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495083 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.7e-48
Identity = 101/128 (78.91%), Postives = 107/128 (83.59%), Query Frame = 0


Query: 1   MAALLLHSSSATSVLFGEMGKLKGRNHHSILSSDKPVRGNFLRLRCNNPTNGISAFFFNP 60
           MA LLLHSSS   VL G MGK +  N HSI S  KP+R N LRL CNN TN I AF F P
Sbjct: 1   MAGLLLHSSSTACVLLGGMGKFREGNRHSIFSPKKPMRANCLRLGCNNSTNAICAFLFTP 60

Query: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEIDTQGSVQED 120
           +EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+TEE+DTQGSVQED
Sbjct: 61  LEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

The following BLAST results are available for this feature:

BLAST of Bhi08G001634 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28150.1	2.3e-21	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

BLAST of Bhi08G001634 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ89	3.2e-20	50.00	UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g...	[more]
P74786	1.5e-06	40.30	UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=11117...	[more]
Q8YQ06	9.3e-04	30.77	UPF0426 protein asl4034 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) ...	[more]

BLAST of Bhi08G001634 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGH6	4.4e-57	90.63	UPF0426 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G0068...	[more]
A0A1S3AZP7	4.4e-57	90.63	UPF0426 protein At1g28150, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484480...	[more]
A0A0A0LT92	6.4e-56	89.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032470 PE=4 SV=1	[more]
A0A6J1E8W6	8.9e-50	80.47	UPF0426 protein At1g28150, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KGM3	1.7e-48	78.91	UPF0426 protein At1g28150, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..128
IPR040278	UPF0426 protein	PANTHER	PTHR35996	OSJNBA0038O10.25 PROTEIN	coord: 1..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M001634	Bhi08M001634	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043086	negative regulation of catalytic activity
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0030599	pectinesterase activity
molecular_function	GO:0046910	pectinesterase inhibitor activity