Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCATTAACTCTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTAGAAGCTCTTGATGAGATTGTTTCCTTCGTTTCTCGCTTCCATGGCTGCGAAGATGACGCTATAGATCTTGTTCTTGACAATCTTCATGACGAATCTTGTACTACTCTGTTCCTTTTTCTTTCATACTACAATTATATCTTCTCTGCAATTCACCTCATTCCTTTTCATGGACAGTTTCTTTGTTTTTTCTATTGTGGCAGTGAAATCTTCGATATTAGACAAGGATGCGGTGCATCGGGTTGTCAGCATTATGCTTGCAGCTGATGAAGTGGGAGAAGAGAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCGACGCTTTTGATATCTCCAAGTTTCGTTATGATCCCATCAAAAAGATCTTCTATCTGTATGTTTTTCTCCCTTTTATATTTATCTGAATAATTATCGAACAATTGTAGAATGAAAGTGTAAGGTTCCTAGTTAGGAATATATTGGAATAATTAGTGGATTATTAGTATGGGTATTAAGAGGTTCCTAGTTAGGAATATATTGGAATAATTAGTGGATTATTAGTATGGATATTAAGAGGAGCAAATTAGTAAATAGTTAGTAAGTTGGTTAAGGCTTTTTATTATGAATAGGAGTGGGTTTGAAAGAAGGGAATAGGAGTGGGTTTGAAAGAAAGGTGTGAAGAATTTTATGTGGGATTTCCTAGTTGGGAATTTGGGAGAGGATTCTCAGCCCTCTAGAATGTGCTGAGCTAATTGATAACAAATTGGTATCCTAATAATATTACTGAAAATCCTTAGCCAACACGTTCTAGAGGGTTGAGAATCCTCTCCCAATATAGCTCAGCACATTCTAGAAGGTTGAGAATCCTCTCCCAAATTCCCAATTAGGAAATCCCACATAAAGTTCTTCACACCCTCCTCTCAACCCTACTCCTTCTACTTATAATAAAAATCCTTAACCAACCTACTAACTATTTACTAATTTGCCCCTTTTAATGCCAATACTAATAAAGCACTAATTATCCCAATATATTCTTAACTAGGAACCTTACAGAAAGCCACCAATTGGCCAATCTGAGCATAGCTGGTTAAGCATATACTCTCGACCAAGAAATTAGGGCAAAATTTCTTATTCCCATATGTTGTTGAATACTTGTAAAAAAAGCTACTAGTTGGACTTTGGGATAATTAGATGGGATAAGTAATGGAACTCACTGCAAAAAAGAGAGGTATAATGGATTTTAACACCTGTTTTTGAACCACGTATGTATATATATATATTTTTTAGACACACAGGAAAACTTCCAATTCATGGGGATGCTCCTGCTAAAGCTGCTTTATATAGAGATAGATTTCTTCTGCTTTCCCAAAGGCTCTCCCGAGATCAGCATTTCTCCAAACCCGCTTTTGACACTGGCATGTCTCATTTTGGAAGTTGTGAGGTACTCCATTTCTCTCGACCCATGAACTGAGCTTGTTAGCCTCTACAATTGAACATGAGCATTTACACTAATTTCGTTTGTGTTATGTTTCCCAGATTTCTCCTATTCAATCTCTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGACGGCCACTTTTACTTGGAGGACCTTACTGCGTCTGTGGAGATTAATTTATCTAATGCTATATCCTTTACTGGCATCTTATATGATGTGGAAAAATCTGAACTTGTTTGA
mRNA sequence
ATGGATGCATTAACTCTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTAGAAGCTCTTGATGAGATTGTTTCCTTCGTTTCTCGCTTCCATGGCTGCGAAGATGACGCTATAGATCTTGTTCTTGACAATCTTCATGACGAATCTTTGAAATCTTCGATATTAGACAAGGATGCGGTGCATCGGGTTGTCAGCATTATGCTTGCAGCTGATGAAGTGGGAGAAGAGAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCGACGCTTTTGATATCTCCAAGTTTCGTTATGATCCCATCAAAAAGATCTTCTATCTACACACAGGAAAACTTCCAATTCATGGGGATGCTCCTGCTAAAGCTGCTTTATATAGAGATAGATTTCTTCTGCTTTCCCAAAGGCTCTCCCGAGATCAGCATTTCTCCAAACCCGCTTTTGACACTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTCTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGACGGCCACTTTTACTTGGAGGACCTTACTGCGTCTGTGGAGATTAATTTATCTAATGCTATATCCTTTACTGGCATCTTATATGATGTGGAAAAATCTGAACTTGTTTGA
Coding sequence (CDS)
ATGGATGCATTAACTCTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTAGAAGCTCTTGATGAGATTGTTTCCTTCGTTTCTCGCTTCCATGGCTGCGAAGATGACGCTATAGATCTTGTTCTTGACAATCTTCATGACGAATCTTTGAAATCTTCGATATTAGACAAGGATGCGGTGCATCGGGTTGTCAGCATTATGCTTGCAGCTGATGAAGTGGGAGAAGAGAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCGACGCTTTTGATATCTCCAAGTTTCGTTATGATCCCATCAAAAAGATCTTCTATCTACACACAGGAAAACTTCCAATTCATGGGGATGCTCCTGCTAAAGCTGCTTTATATAGAGATAGATTTCTTCTGCTTTCCCAAAGGCTCTCCCGAGATCAGCATTTCTCCAAACCCGCTTTTGACACTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTCTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGACGGCCACTTTTACTTGGAGGACCTTACTGCGTCTGTGGAGATTAATTTATCTAATGCTATATCCTTTACTGGCATCTTATATGATGTGGAAAAATCTGAACTTGTTTGA
Protein sequence
MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIDLVLDNLHDESLKSSILDKDAVHRVVSIMLAADEVGEESPNTITSTSALCIIDAFDISKFRYDPIKKIFYLHTGKLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGILYDVEKSELV
Homology
BLAST of Bhi08G001603 vs. TAIR 10
Match:
AT5G22110.1 (DNA polymerase epsilon subunit B2 )
HSP 1 Score: 224.6 bits (571), Expect = 8.3e-59
Identity = 124/211 (58.77%), Postives = 156/211 (73.93%), Query Frame = 0
Query: 7 RKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCED-DAIDLVLDNLHDESLKSSILDKD 66
RKK+Q+K K RG Y++K +ALDEI+ F +F +D +AIDL+LDNL E+ KSS +D +
Sbjct: 8 RKKIQKKFKNRG-YNLKFDALDEILVFADQFPDDDDGEAIDLLLDNL-QETHKSSTVDAE 67
Query: 67 AVHRVVSIMLAADEVGEESPNTITSTSALCIIDAFDISKFRYDPIKKIFYLHTGKLPIHG 126
+V +++ +L A EE TS S+L IIDAF + KF YD +KK F HT LPIHG
Sbjct: 68 SVRGLINRLLGAHNAPEE---PTTSASSLAIIDAFLVPKFGYDSVKKKFNEHTSSLPIHG 127
Query: 127 DAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRKWVMG 186
+A AK ALYR+RF+LLSQR+SR +HFS+PAFD MS F + EIS IQSL+ Q GRKWVMG
Sbjct: 128 EASAKTALYRERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQRGRKWVMG 187
Query: 187 VISQMEDGHFYLEDLTASVEINLSNAISFTG 217
VISQ+EDGHFYLEDL+ASVEI+LS A TG
Sbjct: 188 VISQLEDGHFYLEDLSASVEIDLSKAKITTG 213
BLAST of Bhi08G001603 vs. ExPASy Swiss-Prot
Match:
Q500V9 (DNA polymerase epsilon subunit B OS=Arabidopsis thaliana OX=3702 GN=DPB2 PE=1 SV=1)
HSP 1 Score: 224.6 bits (571), Expect = 1.2e-57
Identity = 124/211 (58.77%), Postives = 156/211 (73.93%), Query Frame = 0
Query: 7 RKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCED-DAIDLVLDNLHDESLKSSILDKD 66
RKK+Q+K K RG Y++K +ALDEI+ F +F +D +AIDL+LDNL E+ KSS +D +
Sbjct: 8 RKKIQKKFKNRG-YNLKFDALDEILVFADQFPDDDDGEAIDLLLDNL-QETHKSSTVDAE 67
Query: 67 AVHRVVSIMLAADEVGEESPNTITSTSALCIIDAFDISKFRYDPIKKIFYLHTGKLPIHG 126
+V +++ +L A EE TS S+L IIDAF + KF YD +KK F HT LPIHG
Sbjct: 68 SVRGLINRLLGAHNAPEE---PTTSASSLAIIDAFLVPKFGYDSVKKKFNEHTSSLPIHG 127
Query: 127 DAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRKWVMG 186
+A AK ALYR+RF+LLSQR+SR +HFS+PAFD MS F + EIS IQSL+ Q GRKWVMG
Sbjct: 128 EASAKTALYRERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQRGRKWVMG 187
Query: 187 VISQMEDGHFYLEDLTASVEINLSNAISFTG 217
VISQ+EDGHFYLEDL+ASVEI+LS A TG
Sbjct: 188 VISQLEDGHFYLEDLSASVEIDLSKAKITTG 213
BLAST of Bhi08G001603 vs. ExPASy Swiss-Prot
Match:
Q54Y85 (DNA polymerase epsilon subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pole2 PE=3 SV=1)
HSP 1 Score: 95.9 bits (237), Expect = 6.3e-19
Identity = 67/214 (31.31%), Postives = 113/214 (52.80%), Query Frame = 0
Query: 7 RKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIDLVLDNLHDESLKSSILDK-D 66
+K++ + + G +SIK +A+ I++ + E I ++DNL KS L +
Sbjct: 6 KKQITKSFSLTG-FSIKADAMKCIINRIKN----EGYDITQLIDNLLKNLDKSQYLQTIE 65
Query: 67 AVHRVVSIMLAADEVGEESPNTITSTSALCIIDAFDISKFRYDPIKKIFYLHTG-KLPIH 126
+++ + ++D + +E AL +IDAF+ F +D K F +H
Sbjct: 66 GCFKLIDTINSSDAIEKE---------ALKVIDAFNTPLFNFDSNSKQFIKSENFDRSLH 125
Query: 127 GDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRKWVM 186
G + +K+ LYR R+L + QR R+ +FS P + I+P+ SL+G TGRK V+
Sbjct: 126 GSSNSKSDLYRKRYLKVLQRTERNDYFSTPVLASDKLKNEYQTITPLSSLLGNTGRKHVL 185
Query: 187 GVISQMEDGHFYLEDLTASVEINLSNAISFTGIL 219
G ISQ+E+ FY+EDL +V+I++S A GI+
Sbjct: 186 GTISQIEEDQFYIEDLNTNVKIDISKAKFEFGIV 205
BLAST of Bhi08G001603 vs. ExPASy Swiss-Prot
Match:
A7YWS7 (DNA polymerase epsilon subunit 2 OS=Bos taurus OX=9913 GN=POLE2 PE=2 SV=1)
HSP 1 Score: 84.0 bits (206), Expect = 2.5e-15
Identity = 64/221 (28.96%), Postives = 116/221 (52.49%), Query Frame = 0
Query: 6 LRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCE-DDAIDLVLDNLHDESLKSSILDK 65
LR + K+RGL ++ EA+ + + + E +DA++ ++D + + L S+++++
Sbjct: 6 LRSRALSAFKLRGL-MLRGEAVKYLTEALQSINEIELEDALEKIIDAVEKQPLSSNMIER 65
Query: 66 DAVHRVVSIMLAADEVGEESPNTITSTSALCIIDAFDISKFRYDPIKKIF---YLHTGKL 125
V A E + TI II AFDI +F Y+ +K F +
Sbjct: 66 SVVE------AAVQECSQSVDETI--DHIFNIIGAFDIPRFVYNSERKKFLPLLMTNHPA 125
Query: 126 P-IHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGS-CEISPIQSLVGQT- 185
P + G A KA L+R+R+ +L QR R + F+ P + GS ++ I++L+G T
Sbjct: 126 PNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTS 185
Query: 186 --GRKWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGI 218
G V+G+I+Q+++G F+LED T +++++LS A +G+
Sbjct: 186 KIGDVIVLGMITQLKEGKFFLEDPTGTIQLDLSKAQFHSGL 217
BLAST of Bhi08G001603 vs. ExPASy Swiss-Prot
Match:
Q5ZKQ6 (DNA polymerase epsilon subunit 2 OS=Gallus gallus OX=9031 GN=POLE2 PE=2 SV=1)
HSP 1 Score: 82.0 bits (201), Expect = 9.4e-15
Identity = 66/230 (28.70%), Postives = 120/230 (52.17%), Query Frame = 0
Query: 1 MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCE-DDAIDLVLDNLHDESLKS 60
M+ LR+++ ++RGL ++ EA+ + + + E +D ID ++D + + L +
Sbjct: 1 MEPERLRRRLGSAFRVRGLL-LRAEAVKYLTETLESLNEEEFEDVIDKIIDAVEKQPLST 60
Query: 61 SILDKDAVHRVV-SIMLAADEVGEESPNTITSTSALCIIDAFDISKFRYDPIKKIFY-LH 120
++++ V V A DE T + II AFDI ++ Y+P +K F L
Sbjct: 61 NMIELSTVEAAVQECSQALDE---------TIKNVFNIIGAFDIPRYIYNPDRKRFVPLS 120
Query: 121 TGKLPI---HGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAF----DTGMSHFGSCEISP 180
LP+ G A KA L+R+R+ +L QR R + F+ A D S F ++
Sbjct: 121 MTNLPVPNLFGTARDKAELFRERYSILQQRTHRHELFTPAAVVIHPDDNRSKF---QLKT 180
Query: 181 IQSLVGQTGR---KWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGI 218
+++L+G T + V+G+I+Q+++G ++LED T V+++LS A +G+
Sbjct: 181 VETLLGNTAKVREVIVLGMITQLKEGKYFLEDPTGVVQLDLSKAQFHSGL 217
BLAST of Bhi08G001603 vs. ExPASy Swiss-Prot
Match:
O54956 (DNA polymerase epsilon subunit 2 OS=Mus musculus OX=10090 GN=Pole2 PE=2 SV=2)
HSP 1 Score: 79.0 bits (193), Expect = 7.9e-14
Identity = 62/221 (28.05%), Postives = 111/221 (50.23%), Query Frame = 0
Query: 6 LRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCE-DDAIDLVLDNLHDESLKSSILDK 65
LR + K+RGL ++ EA + + E ++ + ++D + + L S+++++
Sbjct: 6 LRSRTVSAFKLRGLL-LRSEATKYLTEALQSVTELELEENLGKIIDAVEKQPLSSNMIER 65
Query: 66 DAVHRVVSIMLAADEVGEESPNTITSTSALCIIDAFDISKFRYDPIKKIF----YLHTGK 125
V A E + TI II AFDI +F Y+ +K F +
Sbjct: 66 SVVE------AAVQECSQSMDETI--EHVFNIIGAFDIPRFIYNSERKKFLPLSMTNHAA 125
Query: 126 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGS-CEISPIQSLVGQT- 185
+ G A KA LY +R+ +L QR R + F+ P + + GS ++ I++L+G T
Sbjct: 126 PTLFGTARDKAELYLERYTILHQRTHRHELFTPPVIGSHLEESGSKFQLKTIETLLGSTS 185
Query: 186 --GRKWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGI 218
G V+G+I+Q+++G F+LED T +V+++LS A +G+
Sbjct: 186 KVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGL 217
BLAST of Bhi08G001603 vs. ExPASy TrEMBL
Match:
A0A0A0LUV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G434690 PE=4 SV=1)
HSP 1 Score: 401.4 bits (1030), Expect = 2.6e-108
Identity = 206/227 (90.75%), Postives = 214/227 (94.27%), Query Frame = 0
Query: 1 MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIDLVLDNLHDESLKSS 60
MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSR HG ED+AI+ VLDNLH+ESLKS
Sbjct: 1 MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
Query: 61 ILDKDAVHRVVSIMLAADEVGEESPNTITSTSALCIIDAFDISKFRYDPIKKIFYLHTGK 120
ILDKDAVHRV+SIM+AAD+VGEESPNTITSTSALCII+AFDI KFRYDPIKKIF LHT
Sbjct: 61 ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIF-LHTEN 120
Query: 121 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGR 180
LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGR
Sbjct: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180
Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGILYDVEKSELV 228
KWVMGVISQMEDGHFYLEDLTASVEINLS+AISFTG YDVEKSELV
Sbjct: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNFYDVEKSELV 226
BLAST of Bhi08G001603 vs. ExPASy TrEMBL
Match:
A0A5A7T342 (Glutamate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00330 PE=3 SV=1)
HSP 1 Score: 396.7 bits (1018), Expect = 6.3e-107
Identity = 199/221 (90.05%), Postives = 209/221 (94.57%), Query Frame = 0
Query: 1 MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIDLVLDNLHDESLKSS 60
MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHG EDDAI+LVLD+LH+ESLKS
Sbjct: 614 MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSP 673
Query: 61 ILDKDAVHRVVSIMLAADEVGEESPNTITSTSALCIIDAFDISKFRYDPIKKIFYLHTGK 120
IL+KD VHRV+S +LAA+E E SPNTITST+ALCIIDAFDISKFRYDPIKKIF+ HTG
Sbjct: 674 ILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGD 733
Query: 121 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGR 180
LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGR
Sbjct: 734 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 793
Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGILYDV 222
KWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTG YD+
Sbjct: 794 KWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGNFYDI 834
BLAST of Bhi08G001603 vs. ExPASy TrEMBL
Match:
A0A5D3BIF9 (Glutamate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00380 PE=3 SV=1)
HSP 1 Score: 395.6 bits (1015), Expect = 1.4e-106
Identity = 199/220 (90.45%), Postives = 208/220 (94.55%), Query Frame = 0
Query: 1 MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIDLVLDNLHDESLKSS 60
MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHG EDDAI+LVLD+LH+ESLKS
Sbjct: 613 MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSP 672
Query: 61 ILDKDAVHRVVSIMLAADEVGEESPNTITSTSALCIIDAFDISKFRYDPIKKIFYLHTGK 120
IL+KD VHRV+S +LAA+E E SPNTITST+ALCIIDAFDISKFRYDPIKKIF+ HTG
Sbjct: 673 ILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGD 732
Query: 121 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGR 180
LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGR
Sbjct: 733 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 792
Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGILYD 221
KWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTG YD
Sbjct: 793 KWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGNFYD 832
BLAST of Bhi08G001603 vs. ExPASy TrEMBL
Match:
A0A1S4DTQ5 (DNA polymerase epsilon subunit OS=Cucumis melo OX=3656 GN=LOC103501415 PE=3 SV=1)
HSP 1 Score: 384.4 bits (986), Expect = 3.3e-103
Identity = 194/217 (89.40%), Postives = 204/217 (94.01%), Query Frame = 0
Query: 1 MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIDLVLDNLHDESLKSS 60
MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHG EDDAI+LVLD+LH+ESLKS
Sbjct: 1 MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSP 60
Query: 61 ILDKDAVHRVVSIMLAADEVGEESPNTITSTSALCIIDAFDISKFRYDPIKKIFYLHTGK 120
IL+KD VHRV+S +LAA+E E SPNTITST+ALCIIDAFDISKFRYDPIKKIF+ HTG
Sbjct: 61 ILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGD 120
Query: 121 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGR 180
LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGR
Sbjct: 121 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180
Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGI 218
KWVMGVISQMEDGHFYLEDLTASVEINLSNA TG+
Sbjct: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSNAKITTGL 217
BLAST of Bhi08G001603 vs. ExPASy TrEMBL
Match:
A0A6J1KGF0 (DNA polymerase epsilon subunit OS=Cucurbita maxima OX=3661 GN=LOC111492993 PE=3 SV=1)
HSP 1 Score: 375.9 bits (964), Expect = 1.2e-100
Identity = 190/217 (87.56%), Postives = 203/217 (93.55%), Query Frame = 0
Query: 1 MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGCEDDAIDLVLDNLHDESLKSS 60
MD TLR+KVQRK+KIRG YSIKL+AL EIVSF SRF GCEDDAIDLVLD+LHDESL+SS
Sbjct: 1 MDESTLRRKVQRKSKIRG-YSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSS 60
Query: 61 ILDKDAVHRVVSIMLAADEVGEESPNTITSTSALCIIDAFDISKFRYDPIKKIFYLHTGK 120
I+DKDAVHRVVSI+LAADE GEE P+T TSTSALCIIDAFDISK+RYDPIKKIFY+HTG
Sbjct: 61 IIDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKYRYDPIKKIFYMHTGS 120
Query: 121 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGR 180
LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFD+GMSHFGSCEISPIQSLVGQTGR
Sbjct: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDSGMSHFGSCEISPIQSLVGQTGR 180
Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGI 218
KWVMGVISQMEDGHFYLEDLTASVEINLS+A TG+
Sbjct: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGL 216
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
AT5G22110.1 | 8.3e-59 | 58.77 | DNA polymerase epsilon subunit B2 | [more] |
Match Name | E-value | Identity | Description | |
Q500V9 | 1.2e-57 | 58.77 | DNA polymerase epsilon subunit B OS=Arabidopsis thaliana OX=3702 GN=DPB2 PE=1 SV... | [more] |
Q54Y85 | 6.3e-19 | 31.31 | DNA polymerase epsilon subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pole2 P... | [more] |
A7YWS7 | 2.5e-15 | 28.96 | DNA polymerase epsilon subunit 2 OS=Bos taurus OX=9913 GN=POLE2 PE=2 SV=1 | [more] |
Q5ZKQ6 | 9.4e-15 | 28.70 | DNA polymerase epsilon subunit 2 OS=Gallus gallus OX=9031 GN=POLE2 PE=2 SV=1 | [more] |
O54956 | 7.9e-14 | 28.05 | DNA polymerase epsilon subunit 2 OS=Mus musculus OX=10090 GN=Pole2 PE=2 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LUV9 | 2.6e-108 | 90.75 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G434690 PE=4 SV=1 | [more] |
A0A5A7T342 | 6.3e-107 | 90.05 | Glutamate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3BIF9 | 1.4e-106 | 90.45 | Glutamate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S4DTQ5 | 3.3e-103 | 89.40 | DNA polymerase epsilon subunit OS=Cucumis melo OX=3656 GN=LOC103501415 PE=3 SV=1 | [more] |
A0A6J1KGF0 | 1.2e-100 | 87.56 | DNA polymerase epsilon subunit OS=Cucurbita maxima OX=3661 GN=LOC111492993 PE=3 ... | [more] |