Bhi08G001601 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G001601
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	MYB transcription factor 3
Location	chr8: 56958636 .. 56959645 (-)
RNA-Seq Expression	Bhi08G001601
Synteny	Bhi08G001601

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGGTAAAAAAATAAAAAATAAGATCTGAATTTTGGGTTGGAGGGGGAGGATTATTAGGGTTTTTAATTAGGAAAATGTGCAGCAGAGGGCACTGGCGGCCTGCGGAAGACGAGAAGCTTCGAGAACTGGTGGAGCGTTACGGGCCTCATAACTGGAACGCCATAGCTCAAAAGCTGCAAGGAAGGTCGGGGAAGAGCTGCCGGTTGAGATGGTTCAATCAGTTGGATCCACGAATCAACAGAACCCCTTTCACGGAGGAGGAAGAAGAGAGGCTTATGGCCTCGCACAGGCTTCACGGCAACAGATGGGCCATCATCGCAAGGCTTTTCCCTGGCCGCACCGATAACGCCGTCAAGAACCACTGGCACGTCATCATGGCTCGTAGGTCTAGAAACAAATCCAAAACCCAAACCCAAACCCCATCTAATTCTCTTCATCATCACAACAATAATCATCATCATCATCATCATAATCATAATCGCCTTCTTCTTTCTTCCTTTCTCCAACTCCATACATGTCCCACTTCTAATTCATTGTTCATCCCCAAACCACCATCTGGTAAATTATTTCATTCTATTCTTTCATTTTAATTCATTCTTCAATAATTAATCTGAGCTGACCATTTATATATATACATGCAGTGGATGCAGCACGTACTAATGCATCCGTTCATTATTACGACTTTCTCAACGTAAACACGGAGTCCATAAATGGAAGTGAAGTGATAGACAACTCAAGAAAAGAGGATTATGAAGAGGTCAACAATGGAGAACATCAATCGGTACTTCCCTTCATTGATTTCTTTTCTGCCTCCCAAACCTCCACTAATAACGATTCCATCTCATCCTATTCCTAATATGTGTATAATTATTATTATTAACCCTAAAACCCTCCTTTTATCTTACATTTCCCTCTAACTCATGAAAATCACACCCCGCCCAGACCCATATATAATTTACATATATACATACTTTCTATCCCATTGTAATTTGTACACACAATTTCAC

mRNA sequence

ATTTGGTAAAAAAATAAAAAATAAGATCTGAATTTTGGGTTGGAGGGGGAGGATTATTAGGGTTTTTAATTAGGAAAATGTGCAGCAGAGGGCACTGGCGGCCTGCGGAAGACGAGAAGCTTCGAGAACTGGTGGAGCGTTACGGGCCTCATAACTGGAACGCCATAGCTCAAAAGCTGCAAGGAAGGTCGGGGAAGAGCTGCCGGTTGAGATGGTTCAATCAGTTGGATCCACGAATCAACAGAACCCCTTTCACGGAGGAGGAAGAAGAGAGGCTTATGGCCTCGCACAGGCTTCACGGCAACAGATGGGCCATCATCGCAAGGCTTTTCCCTGGCCGCACCGATAACGCCGTCAAGAACCACTGGCACGTCATCATGGCTCGTAGGTCTAGAAACAAATCCAAAACCCAAACCCAAACCCCATCTAATTCTCTTCATCATCACAACAATAATCATCATCATCATCATCATAATCATAATCGCCTTCTTCTTTCTTCCTTTCTCCAACTCCATACATGTCCCACTTCTAATTCATTGTTCATCCCCAAACCACCATCTGTGGATGCAGCACGTACTAATGCATCCGTTCATTATTACGACTTTCTCAACGTAAACACGGAGTCCATAAATGGAAGTGAAGTGATAGACAACTCAAGAAAAGAGGATTATGAAGAGGTCAACAATGGAGAACATCAATCGGTACTTCCCTTCATTGATTTCTTTTCTGCCTCCCAAACCTCCACTAATAACGATTCCATCTCATCCTATTCCTAATATGTGTATAATTATTATTATTAACCCTAAAACCCTCCTTTTATCTTACATTTCCCTCTAACTCATGAAAATCACACCCCGCCCAGACCCATATATAATTTACATATATACATACTTTCTATCCCATTGTAATTTGTACACACAATTTCAC

Coding sequence (CDS)

ATGTGCAGCAGAGGGCACTGGCGGCCTGCGGAAGACGAGAAGCTTCGAGAACTGGTGGAGCGTTACGGGCCTCATAACTGGAACGCCATAGCTCAAAAGCTGCAAGGAAGGTCGGGGAAGAGCTGCCGGTTGAGATGGTTCAATCAGTTGGATCCACGAATCAACAGAACCCCTTTCACGGAGGAGGAAGAAGAGAGGCTTATGGCCTCGCACAGGCTTCACGGCAACAGATGGGCCATCATCGCAAGGCTTTTCCCTGGCCGCACCGATAACGCCGTCAAGAACCACTGGCACGTCATCATGGCTCGTAGGTCTAGAAACAAATCCAAAACCCAAACCCAAACCCCATCTAATTCTCTTCATCATCACAACAATAATCATCATCATCATCATCATAATCATAATCGCCTTCTTCTTTCTTCCTTTCTCCAACTCCATACATGTCCCACTTCTAATTCATTGTTCATCCCCAAACCACCATCTGTGGATGCAGCACGTACTAATGCATCCGTTCATTATTACGACTTTCTCAACGTAAACACGGAGTCCATAAATGGAAGTGAAGTGATAGACAACTCAAGAAAAGAGGATTATGAAGAGGTCAACAATGGAGAACATCAATCGGTACTTCCCTTCATTGATTTCTTTTCTGCCTCCCAAACCTCCACTAATAACGATTCCATCTCATCCTATTCCTAA

Protein sequence

MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKTQTQTPSNSLHHHNNNHHHHHHNHNRLLLSSFLQLHTCPTSNSLFIPKPPSVDAARTNASVHYYDFLNVNTESINGSEVIDNSRKEDYEEVNNGEHQSVLPFIDFFSASQTSTNNDSISSYS

Homology

[Close]

BLAST of Bhi08G001601 vs. TAIR 10
Match: AT1G73410.1 (myb domain protein 54 )

HSP 1 Score: 228.4 bits (581), Expect = 5.9e-60
Identity = 127/242 (52.48%), Postives = 163/242 (67.36%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKL++LVE+YGPHNWNAIA KL GRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 61  EEEEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKTQ---TQTPS 120
           EEEEERL+A+HR+HGNRW+IIARLFPGRTDNAVKNHWHVIMARR+R  SK +   + T S
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSKPRLLPSTTSS 122

Query: 121 NSLHHHNN--------NHHHHHHNHNRLLLSSFLQL-HTCPTSNSLFIPK-------PPS 180
           +SL             NH++   +  ++  + F+   +     N L   K         +
Sbjct: 123 SSLMASEQIMMSSGGYNHNYSSDDRKKIFPADFINFPYKFSHINHLHFLKEFFTGKIALN 182

Query: 181 VDAARTNASVHYYDFLNVNTESINGSEVIDNSRKEDYEEVNNGEHQSVLPFIDFFSASQT 224
             A ++   + +Y+FL VNT+S N SE+ID    +     ++ +H+S +PF DF S   +
Sbjct: 183 HKANQSKKPMEFYNFLQVNTDS-NKSEIIDQDSGQSKRSDSDTKHESHVPFFDFLSVGNS 242

[Close]

BLAST of Bhi08G001601 vs. TAIR 10
Match: AT1G17950.1 (myb domain protein 52 )

HSP 1 Score: 227.3 bits (578), Expect = 1.3e-59
Identity = 132/249 (53.01%), Postives = 166/249 (66.67%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKLRELVE++GPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 2   MCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFT 61

Query: 61  EEEEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKTQ-------- 120
           EEEEERL+ASHR+HGNRW++IAR FPGRTDNAVKNHWHVIMARR R +SK +        
Sbjct: 62  EEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRGLGHDG 121

Query: 121 TQTPSNSLHHH---------------NNNHHHHHHNHNRLLLSSFLQLHTCPTSNSLFIP 180
           T   +  + ++               N  +   H NH + +L  FL        NS    
Sbjct: 122 TVAATGMIGNYKDCDKERRLATTTAINFPYQFSHINHFQ-VLKEFL-TGKIGFRNSTTPI 181

Query: 181 KPPSVDAARTNASVHYYDFLNVNTESINGSEVIDNSRKEDYEEV---NNGEHQSVLPFID 224
           +  ++D  +T   + +Y+FL VNT+S    E+IDNSRK++ E+V   N   +++ +PF D
Sbjct: 182 QEGAID--QTKRPMEFYNFLQVNTDS-KIHELIDNSRKDEEEDVDQNNRIPNENCVPFFD 241

[Close]

BLAST of Bhi08G001601 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 )

HSP 1 Score: 195.3 bits (495), Expect = 5.5e-50
Identity = 88/109 (80.73%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 3   SRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEE 62
           SRGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEE
Sbjct: 106 SRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEE 165

Query: 63  EEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKT 112
           EEERLM +HRL+GN+WA+IARLFPGRTDN+VKNHWHVIMAR+ R +S +
Sbjct: 166 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQSSS 214

[Close]

BLAST of Bhi08G001601 vs. TAIR 10
Match: AT5G17800.1 (myb domain protein 56 )

HSP 1 Score: 190.3 bits (482), Expect = 1.8e-48
Identity = 83/116 (71.55%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           +CSRGHWRP ED KL+ELV ++GP NWN I+  L GRSGKSCRLRWFNQLDPRIN+  FT
Sbjct: 90  VCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRINKRAFT 149

Query: 61  EEEEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKTQTQTP 117
           EEEE RL+A+HR +GN+WA+I+RLFPGRTDNAVKNHWHVIMARR+R   + + Q P
Sbjct: 150 EEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRESQRQRQQPP 205

[Close]

BLAST of Bhi08G001601 vs. TAIR 10
Match: AT1G26780.1 (myb domain protein 117 )

HSP 1 Score: 188.7 bits (478), Expect = 5.2e-48
Identity = 94/135 (69.63%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 4   RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEE 63
           RGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 64  EERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKS---KTQTQTPSNSL 123
           EERLM +HRL+GN+WA+IARLFPGRTDN+VKNHWHV+MAR+ R  S   + +    +N L
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKLMSNNPL 217

Query: 124 HHHNNNHHHHHHNHN 136
             H  N+HH + N N
Sbjct: 218 KPHLTNNHHPNPNPN 232

[Close]

BLAST of Bhi08G001601 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 8.3e-59
Identity = 127/242 (52.48%), Postives = 163/242 (67.36%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKL++LVE+YGPHNWNAIA KL GRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 61  EEEEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKTQ---TQTPS 120
           EEEEERL+A+HR+HGNRW+IIARLFPGRTDNAVKNHWHVIMARR+R  SK +   + T S
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSKPRLLPSTTSS 122

Query: 121 NSLHHHNN--------NHHHHHHNHNRLLLSSFLQL-HTCPTSNSLFIPK-------PPS 180
           +SL             NH++   +  ++  + F+   +     N L   K         +
Sbjct: 123 SSLMASEQIMMSSGGYNHNYSSDDRKKIFPADFINFPYKFSHINHLHFLKEFFTGKIALN 182

Query: 181 VDAARTNASVHYYDFLNVNTESINGSEVIDNSRKEDYEEVNNGEHQSVLPFIDFFSASQT 224
             A ++   + +Y+FL VNT+S N SE+ID    +     ++ +H+S +PF DF S   +
Sbjct: 183 HKANQSKKPMEFYNFLQVNTDS-NKSEIIDQDSGQSKRSDSDTKHESHVPFFDFLSVGNS 242

[Close]

BLAST of Bhi08G001601 vs. ExPASy Swiss-Prot
Match: Q6R0C4 (Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.8e-58
Identity = 132/249 (53.01%), Postives = 166/249 (66.67%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKLRELVE++GPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR PFT
Sbjct: 2   MCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFT 61

Query: 61  EEEEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKTQ-------- 120
           EEEEERL+ASHR+HGNRW++IAR FPGRTDNAVKNHWHVIMARR R +SK +        
Sbjct: 62  EEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRGLGHDG 121

Query: 121 TQTPSNSLHHH---------------NNNHHHHHHNHNRLLLSSFLQLHTCPTSNSLFIP 180
           T   +  + ++               N  +   H NH + +L  FL        NS    
Sbjct: 122 TVAATGMIGNYKDCDKERRLATTTAINFPYQFSHINHFQ-VLKEFL-TGKIGFRNSTTPI 181

Query: 181 KPPSVDAARTNASVHYYDFLNVNTESINGSEVIDNSRKEDYEEV---NNGEHQSVLPFID 224
           +  ++D  +T   + +Y+FL VNT+S    E+IDNSRK++ E+V   N   +++ +PF D
Sbjct: 182 QEGAID--QTKRPMEFYNFLQVNTDS-KIHELIDNSRKDEEEDVDQNNRIPNENCVPFFD 241

[Close]

BLAST of Bhi08G001601 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 7.7e-49
Identity = 88/109 (80.73%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 3   SRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEE 62
           SRGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEE
Sbjct: 106 SRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEE 165

Query: 63  EEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKT 112
           EEERLM +HRL+GN+WA+IARLFPGRTDN+VKNHWHVIMAR+ R +S +
Sbjct: 166 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQSSS 214

[Close]

BLAST of Bhi08G001601 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-47
Identity = 103/191 (53.93%), Postives = 127/191 (66.49%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           +C+RGHWRPAED KL++LV +YGP NWN IA+KL GRSGKSCRLRWFNQLDPRINR  FT
Sbjct: 46  LCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINRRAFT 105

Query: 61  EEEEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKT-QTQTPSNS 120
           EEEEERLMA+HR +GN+WA+IARLFPGRTDNAVKNHWHV+MARR R +S   + + PS+S
Sbjct: 106 EEEEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMARRHREQSGAFRRRKPSSS 165

Query: 121 -------------------LHHHNNNHHHHHHNHNRLLLSSFLQLHTCPTSNSLFIPKPP 172
                              LHHH++ +   +  ++     S     TC T  SL      
Sbjct: 166 SASPAPAPAPPPPPQPVVALHHHHHRYSQQYSGYSG-AAESDESASTCTTDLSLSSGSAA 225

[Close]

BLAST of Bhi08G001601 vs. ExPASy Swiss-Prot
Match: Q6R053 (Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.5e-47
Identity = 83/116 (71.55%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           +CSRGHWRP ED KL+ELV ++GP NWN I+  L GRSGKSCRLRWFNQLDPRIN+  FT
Sbjct: 90  VCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRINKRAFT 149

Query: 61  EEEEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKTQTQTP 117
           EEEE RL+A+HR +GN+WA+I+RLFPGRTDNAVKNHWHVIMARR+R   + + Q P
Sbjct: 150 EEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRESQRQRQQPP 205

[Close]

BLAST of Bhi08G001601 vs. ExPASy TrEMBL
Match: A0A0A0LPV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G029570 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.1e-93
Identity = 192/241 (79.67%), Postives = 203/241 (84.23%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60

Query: 61  EEEEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKTQTQTPSNSL 120
           EEEEERLMASHR+HGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKTQT T + + 
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKTQTLTQTLTQ 120

Query: 121 HHHNNNHHHHHHNHNRLLLSSFLQLHTCPTSNSLFIPKPPSVDAARTNAS------VHYY 180
            H+NNN      N+NRLLLSSFLQLH  PTSN  FIPKPP  DAA   A+      +HYY
Sbjct: 121 THNNNN------NNNRLLLSSFLQLHAYPTSNISFIPKPPPDDAAAAAAAHSSCSIIHYY 180

Query: 181 DFLNVN-TESINGSEVIDN-SRKEDYEEV---NNGEHQSV-LPFIDFFSASQTSTNNDSI 230
           DFL VN T+S+NGSEVIDN SRKEDYEEV   NNGE Q+V LPFIDFFSA   S+NN SI
Sbjct: 181 DFLQVNSTDSMNGSEVIDNSSRKEDYEEVNNNNNGEQQAVLLPFIDFFSA---SSNNTSI 232

[Close]

BLAST of Bhi08G001601 vs. ExPASy TrEMBL
Match: A0A1S3C1Q2 (transcriptional activator Myb-like OS=Cucumis melo OX=3656 GN=LOC103495663 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 7.7e-92
Identity = 185/237 (78.06%), Postives = 199/237 (83.97%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKTQTQTPSNSL 120
           EEEEERLMASHR+HGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKTQT T + + 
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSKTQTLTQTLTQ 120

Query: 121 HHHNNNHHHHHHNHNRLLLSSFLQLHTCPTSNSLFIPKPPSVDAARTNAS------VHYY 180
            H+NN     H+N++RLLLSSFLQLH  PTS   F+PKPPS DAA   A+      +HYY
Sbjct: 121 THNNN-----HNNNHRLLLSSFLQLHAYPTSTISFVPKPPSDDAAAAAAAHSSCSIIHYY 180

Query: 181 DFLNVN-TESINGSEVIDN-SRKEDYEEVNN----GEHQSV-LPFIDFFSASQTSTN 225
           DFL VN T+S NGSEVIDN SRKEDYEEVNN    GE Q+V LPFIDFFSAS   T+
Sbjct: 181 DFLQVNSTDSTNGSEVIDNSSRKEDYEEVNNNNNSGEQQAVLLPFIDFFSASNNDTS 232

[Close]

BLAST of Bhi08G001601 vs. ExPASy TrEMBL
Match: A0A6J1KP91 (transcription factor MYB52-like OS=Cucurbita maxima OX=3661 GN=LOC111495269 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.0e-76
Identity = 166/254 (65.35%), Postives = 184/254 (72.44%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRNKSK---------- 120
           EEEEERLMASHR+HGNRWAIIARLFPGRTDNAVKNHWHVIMAR+SR+ SK          
Sbjct: 61  EEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKAK 120

Query: 121 --TQTQTPSNSLHHHNNNHHHHHHNHNRLLLSSFLQLHTCPTSNSLFI-----PKPPSVD 180
             T+TQT S S   H             LLLSSFLQ    P + SLF+     P P S  
Sbjct: 121 AITKTQTLSPSSQSH-------------LLLSSFLQTSCPPNNASLFLNHSLYPNPISSF 180

Query: 181 AAR-TNASVHYYDFLNVNTESINGSEVIDNSRKEDYEEVNN----GEHQSVLPFIDFFSA 233
             + T+ SV +YDFL++N ESIN SEVIDNSRKEDYEEVN        + + PFIDFFSA
Sbjct: 181 IPKPTDRSVEFYDFLHLNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFSA 238

[Close]

BLAST of Bhi08G001601 vs. ExPASy TrEMBL
Match: A0A6J1EDT2 (transcription factor MYB52-like OS=Cucurbita moschata OX=3662 GN=LOC111431625 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 8.5e-75
Identity = 165/253 (65.22%), Postives = 185/253 (73.12%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDDKLRELVERYGPHNWNAIAQKLLGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSRN----KSKTQTQTP 120
           EEEEERLM SHR+HGNRWAIIARLFPGRTDNAVKNHWHVIMAR+SR+    K+K + +T 
Sbjct: 61  EEEEERLMTSHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARKSRDSSKAKAKAKAKTK 120

Query: 121 SNSLHHHNNNHHHHHHNHNRLLLSSFLQLHTCPTSN---------------SLFIPKPPS 180
           + +L   + NH         LL SSFLQ  +CP +N               S FIPKP  
Sbjct: 121 TKTLTPSSQNH---------LLFSSFLQT-SCPPNNNASLFLNHSLYPNPISSFIPKP-- 180

Query: 181 VDAARTNASVHYYDFLNVNTESINGSEVIDNSRKEDYEEVNN----GEHQSVLPFIDFFS 231
                T+ SV +YDFL++N ESIN SEVIDNSRKEDYEEVN        + + PFIDFFS
Sbjct: 181 -----TDRSVEFYDFLHLNAESINASEVIDNSRKEDYEEVNQEATATAARPLFPFIDFFS 232

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BLAST of Bhi08G001601 vs. ExPASy TrEMBL
Match: A0A1R3KV89 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_00729 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 7.2e-66
Identity = 148/259 (57.14%), Postives = 173/259 (66.80%), Query Frame = 0


Query: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFT 60
           MCSRGHWRPAEDEKLRELVERYGPHNWNAIA+KLQGRSGKSCRLRWFNQLDPRINR+PFT
Sbjct: 1   MCSRGHWRPAEDEKLRELVERYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPFT 60

Query: 61  EEEEERLMASHRLHGNRWAIIARLFPGRTDNAVKNHWHVIMARRSR-----------NKS 120
           EEEEERL+ASHR+HGNRWA+IARLFPGRTDNAVKNHWHVIMARR R           N S
Sbjct: 61  EEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCRERSRLYAKRSINSS 120

Query: 121 KTQTQTPSNSLHHHNN---NHHHH----------------HHNHNRLLLSSFLQLHTCPT 180
            T T    + ++H+NN   NHH H                HH +     + +L  H  P 
Sbjct: 121 TTSTLPDHDQINHNNNNDQNHHQHAPLHTFDQSQLHFPNYHHKYKHGYPNPYLLPHASPR 180

Query: 181 SNSLFIPKPP------SVDAARTNASVHYYDFLNVNTESINGSEVIDNSRKEDYEEVNNG 224
               F  + P      ++     N  V +YDFL VNT+S N SEV DN+R++D EEV   
Sbjct: 181 FFKDFYARDPCPSHCITLTQDEKNQPVEFYDFLQVNTDS-NKSEVTDNTRRDD-EEVEQ- 240

The following BLAST results are available for this feature:

BLAST of Bhi08G001601 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73410.1	5.9e-60	52.48	myb domain protein 54	[more]
AT1G17950.1	1.3e-59	53.01	myb domain protein 52	[more]
AT1G69560.1	5.5e-50	80.73	myb domain protein 105	[more]
AT5G17800.1	1.8e-48	71.55	myb domain protein 56	[more]
AT1G26780.1	5.2e-48	69.63	myb domain protein 117	[more]

BLAST of Bhi08G001601 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FX36	8.3e-59	52.48	Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1	[more]
Q6R0C4	1.8e-58	53.01	Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1	[more]
Q9SEZ4	7.7e-49	80.73	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]
Q5NBM8	1.1e-47	53.93	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
Q6R053	2.5e-47	71.55	Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1	[more]

BLAST of Bhi08G001601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPV0	1.1e-93	79.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G029570 PE=4 SV=1	[more]
A0A1S3C1Q2	7.7e-92	78.06	transcriptional activator Myb-like OS=Cucumis melo OX=3656 GN=LOC103495663 PE=4 ...	[more]
A0A6J1KP91	2.0e-76	65.35	transcription factor MYB52-like OS=Cucurbita maxima OX=3661 GN=LOC111495269 PE=4...	[more]
A0A6J1EDT2	8.5e-75	65.22	transcription factor MYB52-like OS=Cucurbita moschata OX=3662 GN=LOC111431625 PE...	[more]
A0A1R3KV89	7.2e-66	57.14	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_00729 PE=4 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 55..103 e-value: 1.8E-14 score: 64.1 coord: 3..52 e-value: 3.6E-15 score: 66.4
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..50 score: 11.230598
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 51..101 score: 9.709374
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 7..48 e-value: 2.56132E-14 score: 62.9782
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 58..98 e-value: 3.88572E-11 score: 54.5038
None	No IPR available	GENE3D	1.10.10.60		coord: 4..55 e-value: 1.7E-24 score: 87.5
None	No IPR available	GENE3D	1.10.10.60		coord: 57..134 e-value: 5.2E-19 score: 70.1
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 7..67 e-value: 8.8E-17 score: 61.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..121
None	No IPR available	PANTHER	PTHR45614:SF111	MYB-RELATED PROTEIN A-LIKE	coord: 168..219
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 168..219
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 1..123
None	No IPR available	PANTHER	PTHR45614:SF111	MYB-RELATED PROTEIN A-LIKE	coord: 1..123
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..50 score: 21.547907
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 51..105 score: 25.961678
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 4..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M001601	Bhi08M001601	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding