Bhi08G001227 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G001227
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	F-box protein At1g67340
Location	chr8: 43229723 .. 43231502 (-)
RNA-Seq Expression	Bhi08G001227
Synteny	Bhi08G001227

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAATCTGTCTCGGCTCTTCCCAGCCGTTGCTGGGTCGCTTAGGGATATATAATGAACGCACTCGATTCGTTTTGCCGTCACTACATCCATTTGCTCTAACAACGATTCAATTCTGGCTTCATTTCATCCTCCATCAACGGACCTCCATTTTTGTACTCCTCTCATGGCGGTTTCATTTTCAAGGTGAACGCCACAACGAAGACCACTCTATTACATTCCGGAATGTTGTGCAATAAAAGGAGGAGAACTTCGACCAGCGCCGCCGCCGGGATTTCTGATCTTTTCGACGGTTTGCCGGATGATCTTGTCGTCGTCGTCCTTGGCAAGCTTAGCGCCACCGCTTCTTCTCCGTCCGACCTCGTCAATGTTATGATAACGTAAGAATTGCCGTCTGTTTCGCCTAATTTCTTCAGTTTGTTGTAATTTTCTGCTTGATGTTTATGTGATATTTTGTTGGCGAATTATAGATGTAAAAGGTTCAATCGATTGGCTTTGCATCCGATTGTGTTATCGAAGGCTGGACCTAAATTATTTGAAATCCTAACCAAGAACTGGTCTGAATCGACTCATCGATTTCTCAAATTGTGTGTTTCTGCTGGTAACGTGGAAGCCTGCTACACTCTCGGAATGGTTCGTGTAATTGATTGATTATCCTTTCTGCAATTTCAAATTCACTTGATTTTGAATCTTAATTCGTTCTCTCTTTTCGTTTTTCATTTTTTCAGATCGAGTTTTATTGTTTGAAGAACAGAGGGAGTGGAGCTTCGTTAATGGCGAAAGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCGCTCGCCATCGTACAATTTAACGGAAGCGGTGGCTCAAAGAGCGACAAGAATCTCCGTGCCGGAGTTGCTCTGTGTGGACGAGCCGCTTATCTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGTGTCCCTCAAAACGCATCCGAAGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAACTCACGTCCATAACAAACTCCTCCCTCCGCCGTCTCCACTGCTCCGGCGACCTCCCTTCCGCGATGGATTCCGGCGGATCGCTTCTCAGTGATTTCGGCTGTAACTTTCCAGCGGCAGAGGCTCATCCGGCGAACCGGTTTTTAAGAGATTGGTTCGCATCGGGGCGTGGATTTGTCGCTGAAGGACTGAGACTGTGCTCAAACAGTGGATGTGGAAGGCCGGAGACTCGGCTACATGAATTCCGGCGATGCTCTGTTTGTGGTAATGTAAACTATTGTTCACGAGGATGCCAAGCTTTGGACTGGAAACTGCGGCACAAGACGGAATGTGCGCCGTTTGATCGGTGGCTAATCGAGGATGATGACCTCGAAGGCGACGACAACGGCGACGTAAATAGAATAGAGCAGTTTGGAGACGGTGAGAACGTGGAATCTGAATAAAATTTGATGATTAAAAGCAAGGCTTAATTCTGTTGCTGAACGTCAATTTATTTATCTTTTTGAAGTTCTATTTATTTATTTTTAATTTTGTTTTTCCTTCTCGTTTTTTTAACTTAGAGATGACATCTCGAGGTTTTTGTCCGTATAGCTGCAGCTTTTTTTTCTTTTTTTTTTCCTTCTTTCTTCCATCTCTCTATTTACTTCTCGTTACAAAATGTAAATTTAAAATGTGTATATTTATAATTTTGTAGGTTAAAAAAACTTTAAACACATTTCAATGCTCGAGGTTTTTGTCTGAATACTTACAGAGTCCCTCCC

mRNA sequence

CCAAATCTGTCTCGGCTCTTCCCAGCCGTTGCTGGGTCGCTTAGGGATATATAATGAACGCACTCGATTCGTTTTGCCGTCACTACATCCATTTGCTCTAACAACGATTCAATTCTGGCTTCATTTCATCCTCCATCAACGGACCTCCATTTTTGTACTCCTCTCATGGCGGTTTCATTTTCAAGGTGAACGCCACAACGAAGACCACTCTATTACATTCCGGAATGTTGTGCAATAAAAGGAGGAGAACTTCGACCAGCGCCGCCGCCGGGATTTCTGATCTTTTCGACGGTTTGCCGGATGATCTTGTCGTCGTCGTCCTTGGCAAGCTTAGCGCCACCGCTTCTTCTCCGTCCGACCTCGTCAATGTTATGATAACATGTAAAAGGTTCAATCGATTGGCTTTGCATCCGATTGTGTTATCGAAGGCTGGACCTAAATTATTTGAAATCCTAACCAAGAACTGGTCTGAATCGACTCATCGATTTCTCAAATTGTGTGTTTCTGCTGGTAACGTGGAAGCCTGCTACACTCTCGGAATGATCGAGTTTTATTGTTTGAAGAACAGAGGGAGTGGAGCTTCGTTAATGGCGAAAGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCGCTCGCCATCGTACAATTTAACGGAAGCGGTGGCTCAAAGAGCGACAAGAATCTCCGTGCCGGAGTTGCTCTGTGTGGACGAGCCGCTTATCTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGTGTCCCTCAAAACGCATCCGAAGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAACTCACGTCCATAACAAACTCCTCCCTCCGCCGTCTCCACTGCTCCGGCGACCTCCCTTCCGCGATGGATTCCGGCGGATCGCTTCTCAGTGATTTCGGCTGTAACTTTCCAGCGGCAGAGGCTCATCCGGCGAACCGGTTTTTAAGAGATTGGTTCGCATCGGGGCGTGGATTTGTCGCTGAAGGACTGAGACTGTGCTCAAACAGTGGATGTGGAAGGCCGGAGACTCGGCTACATGAATTCCGGCGATGCTCTGTTTGTGGTAATGTAAACTATTGTTCACGAGGATGCCAAGCTTTGGACTGGAAACTGCGGCACAAGACGGAATGTGCGCCGTTTGATCGGTGGCTAATCGAGGATGATGACCTCGAAGGCGACGACAACGGCGACGTAAATAGAATAGAGCAGTTTGGAGACGGTGAGAACGTGGAATCTGAATAAAATTTGATGATTAAAAGCAAGGCTTAATTCTGTTGCTGAACGTCAATTTATTTATCTTTTTGAAGTTCTATTTATTTATTTTTAATTTTGTTTTTCCTTCTCGTTTTTTTAACTTAGAGATGACATCTCGAGGTTTTTGTCCGTATAGCTGCAGCTTTTTTTTCTTTTTTTTTTCCTTCTTTCTTCCATCTCTCTATTTACTTCTCGTTACAAAATGTAAATTTAAAATGTGTATATTTATAATTTTGTAGGTTAAAAAAACTTTAAACACATTTCAATGCTCGAGGTTTTTGTCTGAATACTTACAGAGTCCCTCCC

Coding sequence (CDS)

ATGTTGTGCAATAAAAGGAGGAGAACTTCGACCAGCGCCGCCGCCGGGATTTCTGATCTTTTCGACGGTTTGCCGGATGATCTTGTCGTCGTCGTCCTTGGCAAGCTTAGCGCCACCGCTTCTTCTCCGTCCGACCTCGTCAATGTTATGATAACATGTAAAAGGTTCAATCGATTGGCTTTGCATCCGATTGTGTTATCGAAGGCTGGACCTAAATTATTTGAAATCCTAACCAAGAACTGGTCTGAATCGACTCATCGATTTCTCAAATTGTGTGTTTCTGCTGGTAACGTGGAAGCCTGCTACACTCTCGGAATGATCGAGTTTTATTGTTTGAAGAACAGAGGGAGTGGAGCTTCGTTAATGGCGAAAGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCGCTCGCCATCGTACAATTTAACGGAAGCGGTGGCTCAAAGAGCGACAAGAATCTCCGTGCCGGAGTTGCTCTGTGTGGACGAGCCGCTTATCTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGTGTCCCTCAAAACGCATCCGAAGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAACTCACGTCCATAACAAACTCCTCCCTCCGCCGTCTCCACTGCTCCGGCGACCTCCCTTCCGCGATGGATTCCGGCGGATCGCTTCTCAGTGATTTCGGCTGTAACTTTCCAGCGGCAGAGGCTCATCCGGCGAACCGGTTTTTAAGAGATTGGTTCGCATCGGGGCGTGGATTTGTCGCTGAAGGACTGAGACTGTGCTCAAACAGTGGATGTGGAAGGCCGGAGACTCGGCTACATGAATTCCGGCGATGCTCTGTTTGTGGTAATGTAAACTATTGTTCACGAGGATGCCAAGCTTTGGACTGGAAACTGCGGCACAAGACGGAATGTGCGCCGTTTGATCGGTGGCTAATCGAGGATGATGACCTCGAAGGCGACGACAACGGCGACGTAAATAGAATAGAGCAGTTTGGAGACGGTGAGAACGTGGAATCTGAATAA

Protein sequence

MLCNKRRRTSTSAAAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLALHPIVLSKAGPKLFEILTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVPQNASEGRRLLIEANARELTSITNSSLRRLHCSGDLPSAMDSGGSLLSDFGCNFPAAEAHPANRFLRDWFASGRGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDNGDVNRIEQFGDGENVESE

Homology

[Close]

BLAST of Bhi08G001227 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 438.3 bits (1126), Expect = 5.6e-123
Identity = 217/339 (64.01%), Postives = 258/339 (76.11%), Query Frame = 0


Query: 18  SDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLALHPIVLSKAGPKLFEIL 77
           +DL D +PDDLV+ +L KL +T+  P+D +NV++TCKR   LA++PIVLS+  PK   + 
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 78  TKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGASLMAKAAIKSHPLALYSL 137
             NWSE +HRFLK CV AG++EACYTLGMI FYCL+NRG+GASLMAKAAI SH  ALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 138 AIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVPQNASEGRRLL 197
           A++QFNGSGGSK+DK+LRAGVALC RAA+LGH+DALRELGHCLQDGYGVPQN SEGRR L
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 198 IEANARELTSITNSSLRR----LHCSGDLPSAMDSGGS----LLSDFGCNFPAAEAHPAN 257
           ++ANAREL ++ +S ++     L  S   P  + + G     LLSDFGCN PA E HPAN
Sbjct: 221 VQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280

Query: 258 RFLRDWFA-SGRGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKL 317
           RFL DWFA  G     +GLRLCS++GCGRPETR HEFRRCSVCG VNYCSR CQALDWKL
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340

Query: 318 RHKTECAPFDRWLIEDDDLEGDDNGDVNRIEQFGDGENV 348
           RHK +CAP  RWL E D  EG+   D N     G+G+NV
Sbjct: 341 RHKMDCAPVQRWLEEGDGGEGNVQIDGN-----GNGDNV 374

[Close]

BLAST of Bhi08G001227 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 414.1 bits (1063), Expect = 1.1e-115
Identity = 202/328 (61.59%), Postives = 249/328 (75.91%), Query Frame = 0


Query: 4   NKRRRTSTSAAAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLALHP 63
           NK++R   +    +++ F+ L DDL++ +L KL+ +ASSPSD + V+ TCKR NRL LHP
Sbjct: 5   NKKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHP 64

Query: 64  IVLSKAGPKLFEILTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGASLMA 123
           +VLSKAG +   +  + WS+S+H+FLKLCV+AGN++A Y+LGMI FYCL+N  SGASLMA
Sbjct: 65  LVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMA 124

Query: 124 KAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDG 183
           KAAIKSH  ALYSL+++QFNGSGGSK+DKNLRAGVALC R+AYLGH+DALRELGHCLQDG
Sbjct: 125 KAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDG 184

Query: 184 YGVPQNASEGRRLLIEANARELTSITNSSLRRLHCSGDLPSAMDSGGSLLSDFGCNFPAA 243
           YGVP++ SEGRRLLI+ANAREL     S L     SGD           L+D     P  
Sbjct: 185 YGVPRDVSEGRRLLIQANARELACSLRSYLSLK--SGD-------ENETLTDLSV-VPVQ 244

Query: 244 EAHPANRFLRDWFASGRGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQA 303
           E HP NRFL++WF+SGR  +AEGLR+CS+ GCGRPETR HEFRRCSVCG VNYCSRGCQA
Sbjct: 245 EIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQA 304

Query: 304 LDWKLRHKTECAPFDRWLIEDDDLEGDD 332
           LDW+ +HK EC P D W+    ++ GDD
Sbjct: 305 LDWRAKHKVECTPLDLWVAAAAEI-GDD 321

[Close]

BLAST of Bhi08G001227 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 47.0 bits (110), Expect = 3.7e-05
Identity = 26/72 (36.11%), Postives = 35/72 (48.61%), Query Frame = 0


Query: 260 RGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPF-- 319
           R F+      C  S CG+  T     ++CS C +V YCS  CQ  DWK  HK +C  F  
Sbjct: 54  RDFMVSDTAEC--SVCGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKCKGFRS 113

Query: 320 -DRWLIEDDDLE 329
            D   +  DD++
Sbjct: 114 TDSSPVRRDDID 118

[Close]

BLAST of Bhi08G001227 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 45.8 bits (107), Expect = 8.1e-05
Identity = 16/32 (50.00%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 287 RCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 319
           RCS C +V YCS  CQ + W++ HK EC P +
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of Bhi08G001227 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 45.8 bits (107), Expect = 8.1e-05
Identity = 16/32 (50.00%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 287 RCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 319
           RCS C +V YCS  CQ + W++ HK EC P +
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of Bhi08G001227 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 7.9e-122
Identity = 217/339 (64.01%), Postives = 258/339 (76.11%), Query Frame = 0


Query: 18  SDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLALHPIVLSKAGPKLFEIL 77
           +DL D +PDDLV+ +L KL +T+  P+D +NV++TCKR   LA++PIVLS+  PK   + 
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 78  TKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGASLMAKAAIKSHPLALYSL 137
             NWSE +HRFLK CV AG++EACYTLGMI FYCL+NRG+GASLMAKAAI SH  ALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 138 AIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVPQNASEGRRLL 197
           A++QFNGSGGSK+DK+LRAGVALC RAA+LGH+DALRELGHCLQDGYGVPQN SEGRR L
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 198 IEANARELTSITNSSLRR----LHCSGDLPSAMDSGGS----LLSDFGCNFPAAEAHPAN 257
           ++ANAREL ++ +S ++     L  S   P  + + G     LLSDFGCN PA E HPAN
Sbjct: 221 VQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280

Query: 258 RFLRDWFA-SGRGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKL 317
           RFL DWFA  G     +GLRLCS++GCGRPETR HEFRRCSVCG VNYCSR CQALDWKL
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340

Query: 318 RHKTECAPFDRWLIEDDDLEGDDNGDVNRIEQFGDGENV 348
           RHK +CAP  RWL E D  EG+   D N     G+G+NV
Sbjct: 341 RHKMDCAPVQRWLEEGDGGEGNVQIDGN-----GNGDNV 374

[Close]

BLAST of Bhi08G001227 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 1.6e-114
Identity = 202/328 (61.59%), Postives = 249/328 (75.91%), Query Frame = 0


Query: 4   NKRRRTSTSAAAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLALHP 63
           NK++R   +    +++ F+ L DDL++ +L KL+ +ASSPSD + V+ TCKR NRL LHP
Sbjct: 5   NKKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHP 64

Query: 64  IVLSKAGPKLFEILTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGASLMA 123
           +VLSKAG +   +  + WS+S+H+FLKLCV+AGN++A Y+LGMI FYCL+N  SGASLMA
Sbjct: 65  LVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMA 124

Query: 124 KAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDG 183
           KAAIKSH  ALYSL+++QFNGSGGSK+DKNLRAGVALC R+AYLGH+DALRELGHCLQDG
Sbjct: 125 KAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDG 184

Query: 184 YGVPQNASEGRRLLIEANARELTSITNSSLRRLHCSGDLPSAMDSGGSLLSDFGCNFPAA 243
           YGVP++ SEGRRLLI+ANAREL     S L     SGD           L+D     P  
Sbjct: 185 YGVPRDVSEGRRLLIQANARELACSLRSYLSLK--SGD-------ENETLTDLSV-VPVQ 244

Query: 244 EAHPANRFLRDWFASGRGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQA 303
           E HP NRFL++WF+SGR  +AEGLR+CS+ GCGRPETR HEFRRCSVCG VNYCSRGCQA
Sbjct: 245 EIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQA 304

Query: 304 LDWKLRHKTECAPFDRWLIEDDDLEGDD 332
           LDW+ +HK EC P D W+    ++ GDD
Sbjct: 305 LDWRAKHKVECTPLDLWVAAAAEI-GDD 321

[Close]

BLAST of Bhi08G001227 vs. ExPASy Swiss-Prot
Match: Q2YDC9 (Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 6.1e-05
Identity = 23/53 (43.40%), Postives = 28/53 (52.83%), Query Frame = 0


Query: 266 GLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 319
           G  LC   GC  P       +RCS C   +YCS+  Q+LDW+L HK  CA  D
Sbjct: 131 GAHLCRVCGCSGP-------KRCSRCHKAHYCSKEHQSLDWRLGHKQACAQTD 176

[Close]

BLAST of Bhi08G001227 vs. ExPASy Swiss-Prot
Match: Q09415 (SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=4 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04
Identity = 20/42 (47.62%), Postives = 26/42 (61.90%), Query Frame = 0


Query: 273 SGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTEC 315
           S C +  T + E ++CS C  + YCS+ CQ  DWKL HK EC
Sbjct: 24  SYCNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVEC 64

[Close]

BLAST of Bhi08G001227 vs. ExPASy Swiss-Prot
Match: Q9SJA1 (Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP19 PE=2 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 5.1e-04
Identity = 26/72 (36.11%), Postives = 35/72 (48.61%), Query Frame = 0


Query: 260 RGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPF-- 319
           R F+      C  S CG+  T     ++CS C +V YCS  CQ  DWK  HK +C  F  
Sbjct: 54  RDFMVSDTAEC--SVCGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKCKGFRS 113

Query: 320 -DRWLIEDDDLE 329
            D   +  DD++
Sbjct: 114 TDSSPVRRDDID 118

[Close]

BLAST of Bhi08G001227 vs. ExPASy TrEMBL
Match: A0A5A7UP50 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004680 PE=4 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 3.2e-190
Identity = 330/350 (94.29%), Postives = 337/350 (96.29%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAAAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSA AGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKLFEILTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120
           LHPIVLSKAGPK FEI TKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNASEGRRLLIEANARELTSITNSSLRRLHCSGDLPSAMDSGGSLLSDFGCNF 240
           QDGYGVPQNASEGRRLLIEANAREL  ITNSSLRRLHCS    SA DSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAAEAHPANRFLRDWFASGRGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PA EAHPAN+FLRDWFASGRG +AEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDNGDVNRIEQFGDGENVESE 351
           CQALDWKLRHKTECAPFDRWLIED++LEGD++G VNRIEQFGDGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDEELEGDEDGGVNRIEQFGDGENVESE 350

[Close]

BLAST of Bhi08G001227 vs. ExPASy TrEMBL
Match: A0A1S3AZD5 (F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103484413 PE=4 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 3.2e-190
Identity = 330/350 (94.29%), Postives = 337/350 (96.29%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAAAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSA AGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKLFEILTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120
           LHPIVLSKAGPK FEI TKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNASEGRRLLIEANARELTSITNSSLRRLHCSGDLPSAMDSGGSLLSDFGCNF 240
           QDGYGVPQNASEGRRLLIEANAREL  ITNSSLRRLHCS    SA DSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAAEAHPANRFLRDWFASGRGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PA EAHPAN+FLRDWFASGRG +AEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDNGDVNRIEQFGDGENVESE 351
           CQALDWKLRHKTECAPFDRWLIED++LEGD++G VNRIEQFGDGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDEELEGDEDGGVNRIEQFGDGENVESE 350

[Close]

BLAST of Bhi08G001227 vs. ExPASy TrEMBL
Match: A0A0A0LTV0 (MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050480 PE=4 SV=1)

HSP 1 Score: 663.7 bits (1711), Expect = 4.3e-187
Identity = 328/351 (93.45%), Postives = 334/351 (95.16%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAAAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSAA GISDLFDGLPDDLVVVVLGKLSATASSP DLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKLFEILTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120
           LHPIVLSKAGPK FEI TKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNASEGRRLLIEANARELTSITNSSLRRLHCSGDLPSAMDSGGSLLSDFGCNF 240
           QDGYGVPQN SEGRRLLIEANAREL  ITNSSLRRLHCS    SA DSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAAEAHPANRFLRDWFASGRGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PA EAHPAN+FLRDWFASGRG +AEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDNGD-VNRIEQFGDGENVESE 351
           CQALDWKLRHKTECAPFDRWLIE+D+LEGDD+G  VNRIEQF DGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 351

[Close]

BLAST of Bhi08G001227 vs. ExPASy TrEMBL
Match: A0A6J1EA77 (F-box protein At5g50450-like OS=Cucurbita moschata OX=3662 GN=LOC111431294 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 1.8e-185
Identity = 322/350 (92.00%), Postives = 329/350 (94.00%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAAAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           M+CNKRRRTSTS  AGISDLFDGLPDDLVVVVLGKLSA ASSPSD+VNVMITCKRFNRLA
Sbjct: 1   MVCNKRRRTSTSTDAGISDLFDGLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKLFEILTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120
           LHP VL KAGPK+FEI T NWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNASEGRRLLIEANARELTSITNSSLRRLHCSGDLPSAMDSGGSLLSDFGCNF 240
           QDGYGV QNASEGRRLLIEANAREL SITNSSL RLHC GD P A DS  SLLSDFGC F
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDQPPATDSSESLLSDFGCKF 240

Query: 241 PAAEAHPANRFLRDWFASGRGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PA E HPAN+FLRDWFASGRGF+AEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDNGDVNRIEQFGDGENVESE 351
           CQALDWKLRHKTECAPFDRWLIEDDDLEGDD+GDVNRIEQ  DGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGDVNRIEQLEDGEDVESE 350

[Close]

BLAST of Bhi08G001227 vs. ExPASy TrEMBL
Match: A0A6J1KQ99 (F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111495512 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 8.9e-185
Identity = 320/350 (91.43%), Postives = 328/350 (93.71%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAAAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           M+CNKRRRTSTS  AGISDLFD LPDDLVVVVLGKLSA ASSPSD+VNVMITCKR NRLA
Sbjct: 1   MVCNKRRRTSTSTGAGISDLFDSLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRLNRLA 60

Query: 61  LHPIVLSKAGPKLFEILTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120
           LHP VL KAGPK+FEI T NWSES+HRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESSHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNASEGRRLLIEANARELTSITNSSLRRLHCSGDLPSAMDSGGSLLSDFGCNF 240
           QDGYGV QNASEGRRLLIEANAREL SITNSSL RLHC GD P A DS  SLLSDFGC F
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDRPPATDSSESLLSDFGCKF 240

Query: 241 PAAEAHPANRFLRDWFASGRGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PA E HPAN+FLRDWFASGRGF+AEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDNGDVNRIEQFGDGENVESE 351
           CQALDWKLRHKTECAPFDRWLIEDDDLEGDD+GDVNRIEQ GDGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGDVNRIEQLGDGEDVESE 350

The following BLAST results are available for this feature:

BLAST of Bhi08G001227 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	5.6e-123	64.01	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	1.1e-115	61.59	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT2G24640.1	3.7e-05	36.11	ubiquitin-specific protease 19	[more]
AT1G17110.1	8.1e-05	50.00	ubiquitin-specific protease 15	[more]
AT1G17110.2	8.1e-05	50.00	ubiquitin-specific protease 15	[more]

BLAST of Bhi08G001227 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	7.9e-122	64.01	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	1.6e-114	61.59	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q2YDC9	6.1e-05	43.40	Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1	[more]
Q09415	3.0e-04	47.62	SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=...	[more]
Q9SJA1	5.1e-04	36.11	Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP1...	[more]

BLAST of Bhi08G001227 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UP50	3.2e-190	94.29	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004680...	[more]
A0A1S3AZD5	3.2e-190	94.29	F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103484413 PE=4 SV=1	[more]
A0A0A0LTV0	4.3e-187	93.45	MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050480 P...	[more]
A0A6J1EA77	1.8e-185	92.00	F-box protein At5g50450-like OS=Cucurbita moschata OX=3662 GN=LOC111431294 PE=4 ...	[more]
A0A6J1KQ99	8.9e-185	91.43	F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111495512 PE=4 SV...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 274..314 e-value: 2.9E-8 score: 33.7
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 272..314 score: 11.205131
None	No IPR available	GENE3D	6.10.140.2220		coord: 262..317 e-value: 2.8E-11 score: 44.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..350
None	No IPR available	PANTHER	PTHR46758:SF9	HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN	coord: 1..340
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 269..319
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 86..200
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 72..259 e-value: 3.2E-16 score: 61.6
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 1..340
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 18..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M001227	Bhi08M001227	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding