Bhi08G001010 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G001010
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like
Location	chr8: 37768400 .. 37771633 (+)
RNA-Seq Expression	Bhi08G001010
Synteny	Bhi08G001010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGTAAGCCACTCAGTCGAAGCTCGTTTACATTTTTCCGTGAACCACTGAACCATACCTCTTCATCCTTCGACAGTTCTTCAAGCAAGGCGAGCGAGGGCGAGGGCGAGAGAGGCCATGGAAGCTGCAATTTGCGGTCGAGTATCTCTTTCACCCAACCATTTCTTCAGCTCAACCAAGCCAGGTATTCATACTTCTACGAATTTGCTCCTCTTAACTTTCTTCCCTAATCAATTTGTCTGTACTTCTTTTGGCTCTTGGCGCTATGTTCTTAATCCAAATTTAGAGGAAGGTTTTTGAGAAATTTCGGTTTCTTTGTTGAATATTTGCATAATTCCTGGCTTTGTGGAGACTGGAGGTTTTGGCTTCTTAGAATGAGTAGAATTATAATTATTAACCGGGAAAATCTGCGTACCATCTGCATGTAGAATGATTATTTTCCTGTTTGTATGAATTTTATTTGTCTTAAAGAAGGAAACAAGGTGTTGCATTATGAGGGGGAAGAACTACAGATGGAACCAAATTGATATTTAGAGGAAGATCTGAAGCTTTCTATTTGTGTGTGTCTGTGTATTTACGGTGCAGTAGTTTAATTCTTTCGTGATTGTTTAGTAAAATCTTGTTTGTGTGGGTGGAAATATTGATATAATTAACTTTATCCTAATCCAAACGTGTAAGAGAGTAAGAAGTCATATTTTCAAATCCTGTAATGTCATTTTTACTAGGTAACATGAAGTTTGATCTTTAAATTAACTGGCAATGAGAAAAGTAGCTTATCTATCTTATTAAAATCGGAAGGTCTCTTGATTTTTCCAATGTAGGATCCTTGGCATGCCCCCTCAAGATAATACCTCTTTTGGGTTCACCATTCTTGAAATTGGATCCTTTTTTTTTTTATTGAACCAAATTCTCGTTTGGGTTTTATGAACTCTGTTACCATATTAGATAACATGGAACTCCATCTCAAAACTAATTGGCAATGAAAGGTCAAAGGAGTAGCTCATATATCTTGTTAAGATTTTGAGGTCTTTTAGCCAATTGATCTTCCAATATGCCAGTTTCAATTTGCGAGGCCCCTTGATTTCTCCAATGTGGAATTCTCAAAAAATTTATCTCCAATCAATATTGCATTCCGAGAGATAAGACACTAAAAGTGAATTAAAATAAAGCTTTTCAATTGGAACTTAGAGTAGAAAGACTATAGTCTTTGAAAAAACTGCATTCTTTGCACCAATATAAAGCTTGAAACAAAATTAATTAAAAAAAACTATCAACATTTGAGGAAGGGTACCCAAAAATTCTCCCATTTTGTTCACACCAAAGGTTCAAAAAATCTTCCCTGTTGATAGCAAGCTATGATGATTTCTTCCCACCATGGTAAGGATGACCCACAAAAATGGAGGCAAGAATGTCATCAATGTTGGAACTTAGAGTAGAAAGACTATGGTCTTTGAAAAAACTGCATTCTTTGCACCAATATAAAGCTTGAAACAAAATTAATTAAAAAAAGCTATCAACATTTGAAGAAGGGTACGCAAAAATTCTCCCATTTTGTTCACACCAAAGGTCCAAAAAATCTTCCCTGTTGATAGCAAGCTATGATGATTTCTTCCCACCATGGTAAGGATGACCCACAAAAATGGAGGCAAGAATGTCATCATGTTGCTAGACATAATCATTGACCAACCAAAAGCATCCAACATTAGTATCCAAAATTCAAGAGGCAAAAGAGCAACCGGACAAAAAGATGGCATGGATGTTAAGAAAACACATCACACCCTAGGAAGCAGAGAGGCGAACATGGAGCATTCTCCTTTGAAGGCCAACAACAATATTGATACCCCCATGACTTAGCTCCCACAAAAAGATTTAAATTTTCTTCAGATAAGCTTCCTTCTAAATCACCGAATACAGGTTGTTCGGAGATGAGTCCTTAGCATGGATAAAATCCTTCATTAATAAACGTATCATGAAAGCTTTAGAGGGATGGTCAAATCCGCCAATTGTTAACATTCCTCTTAGGCATGTCCCGGTGGCAAAGAGTTAGGATGTTTGGTGATATTCACCAAAGTTCTACTTCAAGTCTTGCAGGCTAAAAATTTAATACTAATGCAACCCACATTCCATCTAAGACCTAGAAAATATGATGCATTAAATATTTGTGTAAAATTCAATTGGTTAAGGCATATACTCTTGACGTAGAGGTCAAAATTCAAATCCTCGACCCCTACTTATCATTGACTAGTGTGTGAATCATGCAAGTGGATAAACATAAAAGAGGTTCATTGTAAGAACTAAATTTGCAAGTATCTTAGATCCTATTTATATACTCAGCTTTAAGAAACCTTTAAATTTCTAGTTTGAGATAAATATTAATGGCCTATTCTAAACGTTAATATTCTTGGATAATCTTGGATGACAAATCTTGGATAATCTTGGATGGTGATTGTTAAATTTTACATGATCCATAATGGACCAGATCCTGGGCTGCATTTAATTAAGAACTTCTTGCATTTAACACGTGACCAAAAAGTGAACACTTGGGAATATATATTGATAGATGAGCTCAGAATCAGAGTCAGCTTTGGGCTACAATATTCATAATCACAGTACATTTTTTTTTTACCTGCAAAAGTGTTGACGCTGTTCATTTTATTATTCGTTGGAACTTGCATGACATCTTCATACAATATTATCCATTTATAATTGCTATTTGTGTCATAGGGGATAAATACTATTTTCATAAACAATGTAGAAACCGGAGCGTCTTAATGATGTTATCAGTTGCCGAGCTTGGAAAAGGTGGGGGGTTGTTGGAAAAGCCAACAATAGAGAAGACAACGCCTGGTCGTGAATCTGAGTTTGATGTTAGGTATAAAACATTTCTCCTTTGAATTTATGCCACGTATAGGCAACTAAAGATCTGTACGCATAAAAGAAGGTTCAACTTCCAAAAAAAATTTGGTCTTCAGGAAATTAAGGAAAACTTCTCCGCCTTATCGAGTGTTGCTACATAACGACAATTACAACAAGCGGGAATACGTTGTCCAAGTTCTGATGAAGGTGATCCCTGGAATGACCCTTGACAATGCAGTCAACATAATGCAGGAGGCACATTACAATGGGATGGCAGTGGTAATTATCTGCGCACAAGTGGACGCAGAAGATCACTGCATGCAGCTGAGAGGCAATGGTCTTCTAAGTTCAATCGAGCCTGCAAGTGATGGTTGTTGA

mRNA sequence

CAATTCTTCAAGCAAGGCGAGCGAGGGCGAGGGCGAGAGAGGCCATGGAAGCTGCAATTTGCGGTCGAGTATCTCTTTCACCCAACCATTTCTTCAGCTCAACCAAGCCAGGGGATAAATACTATTTTCATAAACAATGTAGAAACCGGAGCGTCTTAATGATGTTATCAGTTGCCGAGCTTGGAAAAGGTGGGGGGTTGTTGGAAAAGCCAACAATAGAGAAGACAACGCCTGGTCGTGAATCTGAGTTTGATGTTAGGAAATTAAGGAAAACTTCTCCGCCTTATCGAGTGTTGCTACATAACGACAATTACAACAAGCGGGAATACGTTGTCCAAGTTCTGATGAAGGTGATCCCTGGAATGACCCTTGACAATGCAGTCAACATAATGCAGGAGGCACATTACAATGGGATGGCAGTGGTAATTATCTGCGCACAAGTGGACGCAGAAGATCACTGCATGCAGCTGAGAGGCAATGGTCTTCTAAGTTCAATCGAGCCTGCAAGTGATGGTTGTTGA

Coding sequence (CDS)

CAATTCTTCAAGCAAGGCGAGCGAGGGCGAGGGCGAGAGAGGCCATGGAAGCTGCAATTTGCGGTCGAGTATCTCTTTCACCCAACCATTTCTTCAGCTCAACCAAGCCAGGGGATAAATACTATTTTCATAAACAATGTAGAAACCGGAGCGTCTTAATGATGTTATCAGTTGCCGAGCTTGGAAAAGGTGGGGGGTTGTTGGAAAAGCCAACAATAGAGAAGACAACGCCTGGTCGTGAATCTGAGTTTGATGTTAGGAAATTAAGGAAAACTTCTCCGCCTTATCGAGTGTTGCTACATAACGACAATTACAACAAGCGGGAATACGTTGTCCAAGTTCTGATGAAGGTGATCCCTGGAATGACCCTTGACAATGCAGTCAACATAATGCAGGAGGCACATTACAATGGGATGGCAGTGGTAATTATCTGCGCACAAGTGGACGCAGAAGATCACTGCATGCAGCTGAGAGGCAATGGTCTTCTAAGTTCAATCGAGCCTGCAAGTGATGGTTGTTGA

Protein sequence

ILQARRARARAREAMEAAICGRVSLSPNHFFSSTKPGDKYYFHKQCRNRSVLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKLRKTSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

Homology

[Close]

BLAST of Bhi08G001010 vs. TAIR 10
Match: AT1G68660.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein )

HSP 1 Score: 237.3 bits (604), Expect = 9.4e-63
Identity = 118/160 (73.75%), Postives = 136/160 (85.00%), Query Frame = 0


Query: 15  MEAAICGRVSLSPNHFFSSTKPGDKYYFHK-QCRNRSVLMMLSV-AELGKGGGLLEKPTI 74
           ME AICGR++L+P+  F+S K GDK+   K  C NRS+LM LS  A LGKGGG+L+KP I
Sbjct: 1   METAICGRLALAPSSLFNS-KSGDKHLVSKGPCVNRSILMTLSTSAALGKGGGVLDKPII 60

Query: 75  EKTTPGRESEFDVRKLRKTSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQE 134
           EKTTPGRESEFD+RK +K +PPYRV+LHNDN+NKREYVVQVLMKVIPGMT+DNAVNIMQE
Sbjct: 61  EKTTPGRESEFDLRKSKKIAPPYRVILHNDNFNKREYVVQVLMKVIPGMTVDNAVNIMQE 120

Query: 135 AHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC 173
           AH NG+AVVI+CAQ DAE HCMQLRGNGLLSS+EP   GC
Sbjct: 121 AHINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC 159

[Close]

BLAST of Bhi08G001010 vs. TAIR 10
Match: AT1G68660.2 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein )

HSP 1 Score: 168.3 bits (425), Expect = 5.3e-42
Identity = 92/160 (57.50%), Postives = 107/160 (66.88%), Query Frame = 0


Query: 15  MEAAICGRVSLSPNHFFSSTKPGDKYYFHK-QCRNRSVLMMLSV-AELGKGGGLLEKPTI 74
           ME AICGR++L+P+  F+S K GDK+   K  C NRS+LM LS  A LGKGGG+L+KP I
Sbjct: 1   METAICGRLALAPSSLFNS-KSGDKHLVSKGPCVNRSILMTLSTSAALGKGGGVLDKPII 60

Query: 75  EKTTPGRESEFDVRKLRKTSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQE 134
           EKTTPGRESEFD+RK +K +PPYRV+LHNDN+NKREYVVQVLMK                
Sbjct: 61  EKTTPGRESEFDLRKSKKIAPPYRVILHNDNFNKREYVVQVLMK---------------- 120

Query: 135 AHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC 173
                          DAE HCMQLRGNGLLSS+EP   GC
Sbjct: 121 --------------ADAEQHCMQLRGNGLLSSVEPDGGGC 129

[Close]

BLAST of Bhi08G001010 vs. ExPASy Swiss-Prot
Match: Q9SX29 (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPLS1 PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.3e-61
Identity = 118/160 (73.75%), Postives = 136/160 (85.00%), Query Frame = 0


Query: 15  MEAAICGRVSLSPNHFFSSTKPGDKYYFHK-QCRNRSVLMMLSV-AELGKGGGLLEKPTI 74
           ME AICGR++L+P+  F+S K GDK+   K  C NRS+LM LS  A LGKGGG+L+KP I
Sbjct: 1   METAICGRLALAPSSLFNS-KSGDKHLVSKGPCVNRSILMTLSTSAALGKGGGVLDKPII 60

Query: 75  EKTTPGRESEFDVRKLRKTSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQE 134
           EKTTPGRESEFD+RK +K +PPYRV+LHNDN+NKREYVVQVLMKVIPGMT+DNAVNIMQE
Sbjct: 61  EKTTPGRESEFDLRKSKKIAPPYRVILHNDNFNKREYVVQVLMKVIPGMTVDNAVNIMQE 120

Query: 135 AHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC 173
           AH NG+AVVI+CAQ DAE HCMQLRGNGLLSS+EP   GC
Sbjct: 121 AHINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC 159

[Close]

BLAST of Bhi08G001010 vs. ExPASy Swiss-Prot
Match: A0A2K3CNL6 (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=CLPS1 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.0e-22
Identity = 57/109 (52.29%), Postives = 77/109 (70.64%), Query Frame = 0


Query: 64  GGLLEKPTIEKTTPGRESEFDVRKLRKTSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTL 123
           GG+++ PT   TT  ++    V + +K  P Y+VLLHNDNYNKREYVV+VL+KV+  +T+
Sbjct: 61  GGVMDAPT---TT--QQPASGVERSQKRPPIYKVLLHNDNYNKREYVVKVLLKVVEQITV 120

Query: 124 DNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC 173
           D+AV  MQEAH  G+A+V+ C Q +AE +C  LR NGL S+IEP   GC
Sbjct: 121 DDAVTCMQEAHETGVALVVACPQDNAERYCEGLRLNGLTSTIEPG--GC 162

[Close]

BLAST of Bhi08G001010 vs. ExPASy Swiss-Prot
Match: Q31QE7 (ATP-dependent Clp protease adapter protein ClpS OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpS PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 6.8e-18
Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 89  RKTSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVD 148
           RK +P YRVLLHND++N  EYVV VLM+ +P +T   AV+IM EAH NG  +VI C    
Sbjct: 15  RKIAPRYRVLLHNDDFNPMEYVVMVLMQTVPSLTQPQAVDIMMEAHTNGTGLVITCDIEP 74

Query: 149 AEDHCMQLRGNGLLSSIEP 168
           AE +C QL+ +GL SSIEP
Sbjct: 75  AEFYCEQLKSHGLSSSIEP 93

[Close]

BLAST of Bhi08G001010 vs. ExPASy Swiss-Prot
Match: Q5N3U1 (ATP-dependent Clp protease adapter protein ClpS OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=clpS PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.2e-15
Identity = 40/73 (54.79%), Postives = 51/73 (69.86%), Query Frame = 0


Query: 89  RKTSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVD 148
           RK +P YRVLLHND++N  EYVV VLM+ +P +T   AV+IM EAH NG  +VI C    
Sbjct: 15  RKIAPRYRVLLHNDDFNPMEYVVMVLMQTVPSLTQPQAVDIMMEAHTNGTGLVITCDIEP 74

Query: 149 AEDHCMQLRGNGL 162
           AE +C QL+ +GL
Sbjct: 75  AEFYCEQLKSHGL 87

[Close]

BLAST of Bhi08G001010 vs. ExPASy Swiss-Prot
Match: Q3AUR5 (ATP-dependent Clp protease adapter protein ClpS OS=Synechococcus sp. (strain CC9902) OX=316279 GN=clpS PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.5e-14
Identity = 44/102 (43.14%), Postives = 62/102 (60.78%), Query Frame = 0


Query: 68  EKPTIEKTTPGRESEFD--VRKLRKTSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDN 127
           E PT    +PG  +  D    ++RK SP Y+VLLHND  N  EYV+  L +V+P ++  +
Sbjct: 4   ETPT---RSPGGAAVLDKAPERVRKRSPRYKVLLHNDPVNSMEYVMTTLRQVVPQLSEQD 63

Query: 128 AVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEP 168
           A+ +M EAH  G+ +VI+C    AE +C  L+  GL SSIEP
Sbjct: 64  AMAVMLEAHNTGVGLVIVCDIEPAEFYCETLKSKGLTSSIEP 102

[Close]

BLAST of Bhi08G001010 vs. ExPASy TrEMBL
Match: A0A6J1C511 (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008549 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 7.0e-82
Identity = 150/158 (94.94%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 15  MEAAICGRVSLSPNHFFSSTKPGDKYYFHKQCRNRSVLMMLSVAELGKGGGLLEKPTIEK 74
           MEAAICGRV LSPNHFF+ T+PGDKYYFHKQCRNRS LMMLSVAELGKGGGLLEKPTIEK
Sbjct: 1   MEAAICGRVPLSPNHFFNQTRPGDKYYFHKQCRNRSTLMMLSVAELGKGGGLLEKPTIEK 60

Query: 75  TTPGRESEFDVRKLRKTSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 134
           TTPGRESEFDVRK RKT+PPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAH
Sbjct: 61  TTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 120

Query: 135 YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC 173
           YNGM+VVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Sbjct: 121 YNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC 158

[Close]

BLAST of Bhi08G001010 vs. ExPASy TrEMBL
Match: A0A1S3C561 (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103496767 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.1e-82
Identity = 151/158 (95.57%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 15  MEAAICGRVSLSPNHFFSSTKPGDKYYFHKQCRNRSVLMMLSVAELGKGGGLLEKPTIEK 74
           MEAAICGRV LSPN FF+STKPGDKYYFHKQCRNRS LMM+SVAELGKGGGLLEKPTIEK
Sbjct: 1   MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEK 60

Query: 75  TTPGRESEFDVRKLRKTSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 134
           TTPGRESEFDVRK RKTSPPYRVLLHNDN+NKREYVVQVLMKVIPGMTLDNAVNIMQEAH
Sbjct: 61  TTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 120

Query: 135 YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC 173
           YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Sbjct: 121 YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC 158

[Close]

BLAST of Bhi08G001010 vs. ExPASy TrEMBL
Match: A0A0A0LSY6 (ClpS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042210 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.5e-81
Identity = 150/158 (94.94%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 15  MEAAICGRVSLSPNHFFSSTKPGDKYYFHKQCRNRSVLMMLSVAELGKGGGLLEKPTIEK 74
           MEAAICGRV LSPN FF+STKPGDKYYFHKQCRNRS LMM+SVAELGKGGGLLEKP IEK
Sbjct: 1   MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEK 60

Query: 75  TTPGRESEFDVRKLRKTSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 134
           TTPGRESEFDVRK RKTSPPYRVLLHNDN+NKREYVVQVLMKVIPGMTLDNAVNIMQEAH
Sbjct: 61  TTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 120

Query: 135 YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC 173
           YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Sbjct: 121 YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC 158

[Close]

BLAST of Bhi08G001010 vs. ExPASy TrEMBL
Match: A0A6J1K0P0 (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111490541 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.7e-78
Identity = 144/158 (91.14%), Postives = 152/158 (96.20%), Query Frame = 0


Query: 15  MEAAICGRVSLSPNHFFSSTKPGDKYYFHKQCRNRSVLMMLSVAELGKGGGLLEKPTIEK 74
           MEAAICGR+ LSP HFF+ST+PGDKYYFHKQCRNRS+L MLSVAELGKGGGLLEKPT EK
Sbjct: 1   MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEK 60

Query: 75  TTPGRESEFDVRKLRKTSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 134
           TTPGRESEF+VRK RK +PPYRVLLHNDN+NKREYVVQVLMKVIPGMT+DNAVNIMQEAH
Sbjct: 61  TTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVLMKVIPGMTVDNAVNIMQEAH 120

Query: 135 YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC 173
           YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Sbjct: 121 YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC 158

[Close]

BLAST of Bhi08G001010 vs. ExPASy TrEMBL
Match: A0A6J1GS56 (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457001 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.0e-77
Identity = 143/158 (90.51%), Postives = 151/158 (95.57%), Query Frame = 0


Query: 15  MEAAICGRVSLSPNHFFSSTKPGDKYYFHKQCRNRSVLMMLSVAELGKGGGLLEKPTIEK 74
           MEAAICGR+ LSP HFF+ST+PGDKYYFHKQCRNRS+L MLSVAELGKGGGLLEKP  EK
Sbjct: 1   MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPATEK 60

Query: 75  TTPGRESEFDVRKLRKTSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 134
           TTPGRESEF+VRK RK +PPYRVLLHNDN+NKREYVVQVLMKVIPGMT+DNAVNIMQEAH
Sbjct: 61  TTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVLMKVIPGMTVDNAVNIMQEAH 120

Query: 135 YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC 173
           YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Sbjct: 121 YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC 158

The following BLAST results are available for this feature:

BLAST of Bhi08G001010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68660.1	9.4e-63	73.75	Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family pr...	[more]
AT1G68660.2	5.3e-42	57.50	Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family pr...	[more]

BLAST of Bhi08G001010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX29	1.3e-61	73.75	ATP-dependent Clp protease adapter protein CLPS1, chloroplastic OS=Arabidopsis t...	[more]
A0A2K3CNL6	6.0e-22	52.29	ATP-dependent Clp protease adapter protein CLPS1, chloroplastic OS=Chlamydomonas...	[more]
Q31QE7	6.8e-18	56.96	ATP-dependent Clp protease adapter protein ClpS OS=Synechococcus elongatus (stra...	[more]
Q5N3U1	3.2e-15	54.79	ATP-dependent Clp protease adapter protein ClpS OS=Synechococcus sp. (strain ATC...	[more]
Q3AUR5	3.5e-14	43.14	ATP-dependent Clp protease adapter protein ClpS OS=Synechococcus sp. (strain CC9...	[more]

BLAST of Bhi08G001010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C511	7.0e-82	94.94	ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X1 ...	[more]
A0A1S3C561	9.1e-82	95.57	ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like OS=Cucumis ...	[more]
A0A0A0LSY6	3.5e-81	94.94	ClpS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042210 PE=3 S...	[more]
A0A6J1K0P0	2.7e-78	91.14	ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like OS=Cucurbit...	[more]
A0A6J1GS56	1.0e-77	90.51	ATP-dependent Clp protease adapter protein CLPS1, chloroplastic OS=Cucurbita mos...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003769	Adaptor protein ClpS, core	PFAM	PF02617	ClpS	coord: 91..158 e-value: 1.3E-18 score: 66.6
IPR014719	Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like	GENE3D	3.30.1390.10		coord: 89..167 e-value: 2.5E-21 score: 77.3
IPR014719	Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like	SUPERFAMILY	54736	ClpS-like	coord: 89..166
None	No IPR available	PANTHER	PTHR33473:SF14	ATP-DEPENDENT CLP PROTEASE ADAPTOR PROTEIN CLPS	coord: 15..172
IPR022935	ATP-dependent Clp protease adaptor protein ClpS	PANTHER	PTHR33473	ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC	coord: 15..172
IPR022935	ATP-dependent Clp protease adaptor protein ClpS	HAMAP	MF_00302	ClpS	coord: 75..169 score: 15.051861

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M001010	Bhi08M001010	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030163	protein catabolic process
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008233	peptidase activity