Bhi08G000928 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G000928
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	H/ACA ribonucleoprotein complex subunit 4
Location	chr8: 35428324 .. 35430033 (+)
RNA-Seq Expression	Bhi08G000928
Synteny	Bhi08G000928

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCGGCTGTCGGTTCCGACGAACAGCCGTGGAAGGATGTTGTTGACTTTATGATCAAGCCTAGCAGTGTTGCTCCACCGGTGGACACATCTCAATGGCCTATTCTTCTGAAAAACTACGACCGTCTTAATGTACGTACTGGTCATTACACTCCTCTGCCGTCTGGTTTCTTGCCTCTCAAACGGCCTTTGGCTGAGTATATCAGGTATGGTATTCTCAATCTTGATAAACCAGCGAATCCTTCGTCGCACGAAGTGGTGGCTTGGATTAAGCGGATTCTTCGGGTTGATAAAACGGGTCATAGTGGTACTCTCGACCCGAAGGTAACTGGGAACCTGATTGTGTGCATTGATCGAGCCACACGACTTGTGAAGTCGCAACAGGGTGCGGGTAAAGAGTACGTGTGTGTTGCTCGGTTGCATTCTGCTGTGCCCGATGTTTCTAAAGTTGCTCGGGCTCTGGAGACGCTCACTGGGGCTGTGTTTCAGAGGCCGCCGTTGATATCTGCTGTGAAAAGACAGCTTAGGATTAGAACTATATATGAAAGCAAGCTTCTTGAGTATGATGTTGATAAACATTTGGTTGTATTTTGGATTTCTTGTGAAGCGGGAACTTATGTTAGGACGTTGTGTGTACACTTGGGTTTGATTCTTGGCGTTGGAGGGCACATGCAGGAACTTAGGAGGGTGAGATCTGGAATTTTGGGTGAGAAGGATAACATGGTTACAATGCATGATGTGATGGATGCCCAATGGGTTTATGATAATTTCAAGGATGAAAGCTATCTGAGGAGGGTAATTATGCCTCTTGAGGTGGTTTTGACAAGCTATAAAAGATTGGTTGTCAAGGATTCTGCTGTTAATGCTATTTGTTATGGTGCGAAGTTGATGATTCCAGGGTTGTTGAGATTCGAAAACGATATTGGAGTTGGGGAAGAAGTTGTACTTATGACCACCAAAGGTGAAGCCATTGCTCTTGGTATTGCAGAGATGACTACTGCAGTGATGGCAACTTGTGACCATGGTGTTGTTGCAAAGATCAAAAGGGTTGTGATGGATCGAGATACTTATCCAAGGAAGTGGGGACTAGGTCCAAGGGCATCAATGAAGAAAAAACTTATTGGGGAAGGGAAGTTGGACAAGCATGGGAAGCCAAATGAGAAAACTCCTCAGGAATGGCTGAGGAATTTGGTTTTACCCACTGGTGGGGACTCTTTGGTTGCAAGTGTTTTCGCTACCGACACTGCAACTGCTAAGCCTACTGCTGCAGAAGAGACAGGAAAAGATGGCGGAGGGCGGAAGCGAAAACTAGATGAAGAAACTGAAGCTGCTCCAGGTAAGAAACTGAAGGCTGATAAGGCTGAAGATGTTGAAGAAGAAGTCGGGAAGAAAGAGAAGAAGAAGAAGAAGAAGAAGAAAGACAAAGAGAAGGGTACTGCAGAAGAACCTTCGGATGAGGAGAATGTTGAAAATTCAGAGAAGAAAAAAAAGAAGAAGGACAAAGAAGCTAAAGAAGCTAAAGAAGCAGGTACACCTGAGACAGAAAAGTCCAAGAAGAAAAAGAAAAAGAAAGATAACGAATCTGGAAATGATGATTCTCATATACATGCAGCTGATGTTCAAAATGGTGAAGCAGATGGTCATGTTGATGGAAGTGAGAAGAAAAAGAAGAAGAAAAAGAAGAATAAAGAAGATGCAGAAGAATAA

mRNA sequence

ATGTCATCGGCTGTCGGTTCCGACGAACAGCCGTGGAAGGATGTTGTTGACTTTATGATCAAGCCTAGCAGTGTTGCTCCACCGGTGGACACATCTCAATGGCCTATTCTTCTGAAAAACTACGACCGTCTTAATGTACGTACTGGTCATTACACTCCTCTGCCGTCTGGTTTCTTGCCTCTCAAACGGCCTTTGGCTGAGTATATCAGGTATGGTATTCTCAATCTTGATAAACCAGCGAATCCTTCGTCGCACGAAGTGGTGGCTTGGATTAAGCGGATTCTTCGGGTTGATAAAACGGGTCATAGTGGTACTCTCGACCCGAAGGTAACTGGGAACCTGATTGTGTGCATTGATCGAGCCACACGACTTGTGAAGTCGCAACAGGGTGCGGGTAAAGAGTACGTGTGTGTTGCTCGGTTGCATTCTGCTGTGCCCGATGTTTCTAAAGTTGCTCGGGCTCTGGAGACGCTCACTGGGGCTGTGTTTCAGAGGCCGCCGTTGATATCTGCTGTGAAAAGACAGCTTAGGATTAGAACTATATATGAAAGCAAGCTTCTTGAGTATGATGTTGATAAACATTTGGTTGTATTTTGGATTTCTTGTGAAGCGGGAACTTATGTTAGGACGTTGTGTGTACACTTGGGTTTGATTCTTGGCGTTGGAGGGCACATGCAGGAACTTAGGAGGGTGAGATCTGGAATTTTGGGTGAGAAGGATAACATGGTTACAATGCATGATGTGATGGATGCCCAATGGGTTTATGATAATTTCAAGGATGAAAGCTATCTGAGGAGGGTAATTATGCCTCTTGAGGTGGTTTTGACAAGCTATAAAAGATTGGTTGTCAAGGATTCTGCTGTTAATGCTATTTGTTATGGTGCGAAGTTGATGATTCCAGGGTTGTTGAGATTCGAAAACGATATTGGAGTTGGGGAAGAAGTTGTACTTATGACCACCAAAGGTGAAGCCATTGCTCTTGGTATTGCAGAGATGACTACTGCAGTGATGGCAACTTGTGACCATGGTGTTGTTGCAAAGATCAAAAGGGTTGTGATGGATCGAGATACTTATCCAAGGAAGTGGGGACTAGGTCCAAGGGCATCAATGAAGAAAAAACTTATTGGGGAAGGGAAGTTGGACAAGCATGGGAAGCCAAATGAGAAAACTCCTCAGGAATGGCTGAGGAATTTGGTTTTACCCACTGGTGGGGACTCTTTGGTTGCAAGTGTTTTCGCTACCGACACTGCAACTGCTAAGCCTACTGCTGCAGAAGAGACAGGAAAAGATGGCGGAGGGCGGAAGCGAAAACTAGATGAAGAAACTGAAGCTGCTCCAGGTAAGAAACTGAAGGCTGATAAGGCTGAAGATGTTGAAGAAGAAGTCGGGAAGAAAGAGAAGAAGAAGAAGAAGAAGAAGAAAGACAAAGAGAAGGGTACTGCAGAAGAACCTTCGGATGAGGAGAATGTTGAAAATTCAGAGAAGAAAAAAAAGAAGAAGGACAAAGAAGCTAAAGAAGCTAAAGAAGCAGGTACACCTGAGACAGAAAAGTCCAAGAAGAAAAAGAAAAAGAAAGATAACGAATCTGGAAATGATGATTCTCATATACATGCAGCTGATGTTCAAAATGGTGAAGCAGATGGTCATGTTGATGGAAGTGAGAAGAAAAAGAAGAAGAAAAAGAAGAATAAAGAAGATGCAGAAGAATAA

Coding sequence (CDS)

ATGTCATCGGCTGTCGGTTCCGACGAACAGCCGTGGAAGGATGTTGTTGACTTTATGATCAAGCCTAGCAGTGTTGCTCCACCGGTGGACACATCTCAATGGCCTATTCTTCTGAAAAACTACGACCGTCTTAATGTACGTACTGGTCATTACACTCCTCTGCCGTCTGGTTTCTTGCCTCTCAAACGGCCTTTGGCTGAGTATATCAGGTATGGTATTCTCAATCTTGATAAACCAGCGAATCCTTCGTCGCACGAAGTGGTGGCTTGGATTAAGCGGATTCTTCGGGTTGATAAAACGGGTCATAGTGGTACTCTCGACCCGAAGGTAACTGGGAACCTGATTGTGTGCATTGATCGAGCCACACGACTTGTGAAGTCGCAACAGGGTGCGGGTAAAGAGTACGTGTGTGTTGCTCGGTTGCATTCTGCTGTGCCCGATGTTTCTAAAGTTGCTCGGGCTCTGGAGACGCTCACTGGGGCTGTGTTTCAGAGGCCGCCGTTGATATCTGCTGTGAAAAGACAGCTTAGGATTAGAACTATATATGAAAGCAAGCTTCTTGAGTATGATGTTGATAAACATTTGGTTGTATTTTGGATTTCTTGTGAAGCGGGAACTTATGTTAGGACGTTGTGTGTACACTTGGGTTTGATTCTTGGCGTTGGAGGGCACATGCAGGAACTTAGGAGGGTGAGATCTGGAATTTTGGGTGAGAAGGATAACATGGTTACAATGCATGATGTGATGGATGCCCAATGGGTTTATGATAATTTCAAGGATGAAAGCTATCTGAGGAGGGTAATTATGCCTCTTGAGGTGGTTTTGACAAGCTATAAAAGATTGGTTGTCAAGGATTCTGCTGTTAATGCTATTTGTTATGGTGCGAAGTTGATGATTCCAGGGTTGTTGAGATTCGAAAACGATATTGGAGTTGGGGAAGAAGTTGTACTTATGACCACCAAAGGTGAAGCCATTGCTCTTGGTATTGCAGAGATGACTACTGCAGTGATGGCAACTTGTGACCATGGTGTTGTTGCAAAGATCAAAAGGGTTGTGATGGATCGAGATACTTATCCAAGGAAGTGGGGACTAGGTCCAAGGGCATCAATGAAGAAAAAACTTATTGGGGAAGGGAAGTTGGACAAGCATGGGAAGCCAAATGAGAAAACTCCTCAGGAATGGCTGAGGAATTTGGTTTTACCCACTGGTGGGGACTCTTTGGTTGCAAGTGTTTTCGCTACCGACACTGCAACTGCTAAGCCTACTGCTGCAGAAGAGACAGGAAAAGATGGCGGAGGGCGGAAGCGAAAACTAGATGAAGAAACTGAAGCTGCTCCAGGTAAGAAACTGAAGGCTGATAAGGCTGAAGATGTTGAAGAAGAAGTCGGGAAGAAAGAGAAGAAGAAGAAGAAGAAGAAGAAAGACAAAGAGAAGGGTACTGCAGAAGAACCTTCGGATGAGGAGAATGTTGAAAATTCAGAGAAGAAAAAAAAGAAGAAGGACAAAGAAGCTAAAGAAGCTAAAGAAGCAGGTACACCTGAGACAGAAAAGTCCAAGAAGAAAAAGAAAAAGAAAGATAACGAATCTGGAAATGATGATTCTCATATACATGCAGCTGATGTTCAAAATGGTGAAGCAGATGGTCATGTTGATGGAAGTGAGAAGAAAAAGAAGAAGAAAAAGAAGAATAAAGAAGATGCAGAAGAATAA

Protein sequence

MSSAVGSDEQPWKDVVDFMIKPSSVAPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGFLPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDVDKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIGEGKLDKHGKPNEKTPQEWLRNLVLPTGGDSLVASVFATDTATAKPTAAEETGKDGGGRKRKLDEETEAAPGKKLKADKAEDVEEEVGKKEKKKKKKKKDKEKGTAEEPSDEENVENSEKKKKKKDKEAKEAKEAGTPETEKSKKKKKKKDNESGNDDSHIHAADVQNGEADGHVDGSEKKKKKKKKNKEDAEE

Homology

[Close]

BLAST of Bhi08G000928 vs. TAIR 10
Match: AT3G57150.1 (homologue of NAP57 )

HSP 1 Score: 755.7 bits (1950), Expect = 2.6e-218
Identity = 414/558 (74.19%), Postives = 466/558 (83.51%), Query Frame = 0


Query: 14  DVVDFMIKPSSVAPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGFLPLKRPLAEYIRYGI 73
           D  D+MIKP S  P +DTSQWPILLKNYDRLNVRTGHYTP+ +G  PLKRPL EYIRYG+
Sbjct: 23  DTGDYMIKPQSFTPAIDTSQWPILLKNYDRLNVRTGHYTPISAGHSPLKRPLQEYIRYGV 82

Query: 74  LNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGK 133
           +NLDKPANPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGK
Sbjct: 83  INLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGK 142

Query: 134 EYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDVDK 193
           EYVCVARLHSAVPDV+KVARALE+LTGAVFQRPPLISAVKRQLRIRTIYESKLLEYD D+
Sbjct: 143 EYVCVARLHSAVPDVAKVARALESLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADR 202

Query: 194 HLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQW 253
           HLVVFW+SCEAGTY+RT+CVHLGL+LGVGGHMQELRRVRSGILGE +NMVTMHDVMDAQ+
Sbjct: 203 HLVVFWVSCEAGTYIRTMCVHLGLLLGVGGHMQELRRVRSGILGENNNMVTMHDVMDAQF 262

Query: 254 VYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIGVGE 313
           VYDN +DESYLRRVIMPLE++LTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDI VG 
Sbjct: 263 VYDNSRDESYLRRVIMPLEMILTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIDVGT 322

Query: 314 EVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKK 373
           EVVLMTTKGEAIA+GIAEMTT+VMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKK
Sbjct: 323 EVVLMTTKGEAIAVGIAEMTTSVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKK 382

Query: 374 LIGEGKLDKHGKPNEKTPQEWLRNLVLPTGGDSLVASVFATDTATAKPTAAEETGKDGGG 433
           LI +GKLDKHGKPNEKTP EW RN+VLPTGGD+++A   A   A  +  A  E G+ G  
Sbjct: 383 LIADGKLDKHGKPNEKTPVEWSRNVVLPTGGDAIIAGAAA---APEEIKADAENGEAGEA 442

Query: 434 RKRKLDEETEAAPGKKLKADKAEDVEEEVGKKEKKKKKKKKDKEKGTAEEPSDEENVENS 493
           RKRK D+ +++      K  K ++VE E  +++ K  KKKK K+K   EE  +EE     
Sbjct: 443 RKRKHDDSSDSPAPVTTKKSKTKEVEGEEAEEKVKSSKKKKKKDK---EEEKEEEAGSEK 502

Query: 494 EKKKKKKDKEAKEAKEAGTPETEKSKKKKKKKDNESGNDDSHIHAADVQNGEADGHVDGS 553
           ++KKKKKDK+ +  +E  +P++EK KKKKK KD E+        A D ++  A    +  
Sbjct: 503 KEKKKKKDKKEEVIEEVASPKSEK-KKKKKSKDTEA--------AVDAEDESAAEKSEKK 562

Query: 554 EKKKKKKKKNK--EDAEE 570
           +KKK KKKKNK  ED EE
Sbjct: 563 KKKKDKKKKNKDSEDDEE 565

[Close]

BLAST of Bhi08G000928 vs. TAIR 10
Match: AT5G14460.1 (Pseudouridine synthase family protein )

HSP 1 Score: 98.2 bits (243), Expect = 2.2e-20
Identity = 63/202 (31.19%), Postives = 99/202 (49.01%), Query Frame = 0


Query: 73  ILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAG 132
           +L ++KP   +S  V   ++R+++V K GH+GTLDP  TG LIVC+ +AT++V   QG  
Sbjct: 323 VLLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKVVDRYQGMI 382

Query: 133 KEYVCVARLHSAVPDV-----------------SKVARALETLTGAVFQRPPLISAVK-- 192
           K Y  V RL  A   +                   + +AL +  G ++Q PP+ SA+K  
Sbjct: 383 KGYSGVFRLGEATSTLDADSPVIQRESWEHIKDDDIKKALTSFLGEIWQVPPMFSAIKVG 442

Query: 193 ------RQLRIRTIYES----KLLEYDVDKHL-----VVFWISCEAGTYVRTLCVHLGLI 241
                 +  R  T+  S     + ++D+++ L     ++F + C  GTY+R+LC  L   
Sbjct: 443 GEKMYEKARRGETVELSPRRISIFQFDIERSLDDRQNLIFRVICSKGTYIRSLCADLAKA 502

[Close]

BLAST of Bhi08G000928 vs. ExPASy Swiss-Prot
Match: Q9LD90 (H/ACA ribonucleoprotein complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=CBF5 PE=1 SV=1)

HSP 1 Score: 755.7 bits (1950), Expect = 3.6e-217
Identity = 414/558 (74.19%), Postives = 466/558 (83.51%), Query Frame = 0


Query: 14  DVVDFMIKPSSVAPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGFLPLKRPLAEYIRYGI 73
           D  D+MIKP S  P +DTSQWPILLKNYDRLNVRTGHYTP+ +G  PLKRPL EYIRYG+
Sbjct: 23  DTGDYMIKPQSFTPAIDTSQWPILLKNYDRLNVRTGHYTPISAGHSPLKRPLQEYIRYGV 82

Query: 74  LNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGK 133
           +NLDKPANPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGK
Sbjct: 83  INLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGK 142

Query: 134 EYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDVDK 193
           EYVCVARLHSAVPDV+KVARALE+LTGAVFQRPPLISAVKRQLRIRTIYESKLLEYD D+
Sbjct: 143 EYVCVARLHSAVPDVAKVARALESLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADR 202

Query: 194 HLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQW 253
           HLVVFW+SCEAGTY+RT+CVHLGL+LGVGGHMQELRRVRSGILGE +NMVTMHDVMDAQ+
Sbjct: 203 HLVVFWVSCEAGTYIRTMCVHLGLLLGVGGHMQELRRVRSGILGENNNMVTMHDVMDAQF 262

Query: 254 VYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIGVGE 313
           VYDN +DESYLRRVIMPLE++LTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDI VG 
Sbjct: 263 VYDNSRDESYLRRVIMPLEMILTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIDVGT 322

Query: 314 EVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKK 373
           EVVLMTTKGEAIA+GIAEMTT+VMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKK
Sbjct: 323 EVVLMTTKGEAIAVGIAEMTTSVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKK 382

Query: 374 LIGEGKLDKHGKPNEKTPQEWLRNLVLPTGGDSLVASVFATDTATAKPTAAEETGKDGGG 433
           LI +GKLDKHGKPNEKTP EW RN+VLPTGGD+++A   A   A  +  A  E G+ G  
Sbjct: 383 LIADGKLDKHGKPNEKTPVEWSRNVVLPTGGDAIIAGAAA---APEEIKADAENGEAGEA 442

Query: 434 RKRKLDEETEAAPGKKLKADKAEDVEEEVGKKEKKKKKKKKDKEKGTAEEPSDEENVENS 493
           RKRK D+ +++      K  K ++VE E  +++ K  KKKK K+K   EE  +EE     
Sbjct: 443 RKRKHDDSSDSPAPVTTKKSKTKEVEGEEAEEKVKSSKKKKKKDK---EEEKEEEAGSEK 502

Query: 494 EKKKKKKDKEAKEAKEAGTPETEKSKKKKKKKDNESGNDDSHIHAADVQNGEADGHVDGS 553
           ++KKKKKDK+ +  +E  +P++EK KKKKK KD E+        A D ++  A    +  
Sbjct: 503 KEKKKKKDKKEEVIEEVASPKSEK-KKKKKSKDTEA--------AVDAEDESAAEKSEKK 562

Query: 554 EKKKKKKKKNK--EDAEE 570
           +KKK KKKKNK  ED EE
Sbjct: 563 KKKKDKKKKNKDSEDDEE 565

[Close]

BLAST of Bhi08G000928 vs. ExPASy Swiss-Prot
Match: Q5ZJH9 (H/ACA ribonucleoprotein complex subunit DKC1 OS=Gallus gallus OX=9031 GN=DKC1 PE=2 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 2.6e-170
Identity = 324/506 (64.03%), Postives = 392/506 (77.47%), Query Frame = 0


Query: 11  PWKDVVD------FMIKPSSVAPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGFLPLKRP 70
           P +DV D      F+IKP S    +DTSQWP+LLKN+D+LNV T HYTPLPSG  PLKR 
Sbjct: 21  PDEDVADIQHTEEFLIKPESRVAQLDTSQWPLLLKNFDKLNVLTTHYTPLPSGANPLKRE 80

Query: 71  LAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRL 130
           +++Y+R G +NLDKP+NPSSHEVVAWI+RILRV+KTGHSGTLDPKVTG LIVCI+RATRL
Sbjct: 81  ISDYVRSGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRL 140

Query: 131 VKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYES 190
           VKSQQ AGKEYV + RLH+A+   +++ARA+ETLTGA+FQRPPLI+AVKRQLR+RTIYES
Sbjct: 141 VKSQQSAGKEYVGIVRLHNAIESEAQLARAIETLTGALFQRPPLIAAVKRQLRVRTIYES 200

Query: 191 KLLEYDVDKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVT 250
           KL+EYD ++ L +FW+SCEAGTY+RTLCVHLGL+LGVGG MQELRRVRSGILGE DNMVT
Sbjct: 201 KLVEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGILGEMDNMVT 260

Query: 251 MHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLR 310
           MHDV+DAQW YDN KD+SYLRRVI+PLE +LTS+KRLV+KDSAVNAICYGAK+M+PG+LR
Sbjct: 261 MHDVLDAQWQYDNNKDDSYLRRVILPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLR 320

Query: 311 FENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGL 370
           +E+ I + +E+V++TTKGEAI L IA MTTAV++TCDHGVVAKIKRV+M+RDTYPRKWGL
Sbjct: 321 YEDGIELKQEIVVITTKGEAICLAIALMTTAVISTCDHGVVAKIKRVIMERDTYPRKWGL 380

Query: 371 GPRASMKKKLIGEGKLDKHGKPNEKTPQEWLRNLVLPTGGDSLVASVFATDTATAKPTAA 430
           GP+AS KK +I +G LDKHGKPNE TP  W +  V     D   +S      A   P A 
Sbjct: 381 GPKASQKKMMIQKGLLDKHGKPNECTPDSWKKEYV-----DYRESS---KKEAAKVPQAV 440

Query: 431 EETGKDGGGRKRKLDEETEAAPGKKLKADKAEDVEEEVGKKEKKKKKKKKDKEKGTAEEP 490
            E  +    RKR+ + E EA          A    EE+ KKEKKKKKK+K  ++      
Sbjct: 441 SEVER-APKRKRESESENEAV---SPPPSPATPPPEELSKKEKKKKKKEKKAKEAAESGE 500

Query: 491 SDEENVENSEKKKKKKDKEAKEAKEA 511
              E +  S  KKKKK K+ KE +E+
Sbjct: 501 EQVEVISESSAKKKKKKKKQKEVEES 514

[Close]

BLAST of Bhi08G000928 vs. ExPASy Swiss-Prot
Match: O14007 (H/ACA ribonucleoprotein complex subunit cbf5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cbf5 PE=3 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 8.2e-169
Identity = 313/489 (64.01%), Postives = 380/489 (77.71%), Query Frame = 0


Query: 16  VDFMIKPSSV-APPVDTSQWPILLKNYDRLNVRTGHYTPLPSGFLPLKRPLAEYIRYGIL 75
           VDFMIKP +  A  +DT++WP+LLKN+D+L VRTGHYTP+P G  PLKRP+AEY+  G++
Sbjct: 8   VDFMIKPEATSASKIDTAEWPLLLKNFDKLLVRTGHYTPIPCGNNPLKRPIAEYVSSGVI 67

Query: 76  NLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKE 135
           NLDKPANPSSHEVVAW+K+ILRV+KTGHSGTLDPKVTG LI+C DRATRLVKSQQ AGKE
Sbjct: 68  NLDKPANPSSHEVVAWVKKILRVEKTGHSGTLDPKVTGCLIICNDRATRLVKSQQSAGKE 127

Query: 136 YVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDVDKH 195
           YVCV RLH +V     VA A+ETLTGA+FQRPPLISAVKRQLRIR+IYESKL+E+D +++
Sbjct: 128 YVCVLRLHDSVEGERNVASAIETLTGALFQRPPLISAVKRQLRIRSIYESKLIEFDNERN 187

Query: 196 LVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWV 255
           L VFW SCEAGTY+RTLCVHLGL+LGVGGHMQELRRVRSG L E D++VTMHDV+DAQW+
Sbjct: 188 LAVFWASCEAGTYMRTLCVHLGLLLGVGGHMQELRRVRSGCLSENDDIVTMHDVLDAQWI 247

Query: 256 YDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIGVGEE 315
           YDN +DESYLRRVI PLE +L  YKR+VVKDSAVNAICYGAKLMIPGLLR+E  I V EE
Sbjct: 248 YDNTRDESYLRRVIRPLESLLVGYKRIVVKDSAVNAICYGAKLMIPGLLRYEAGIEVNEE 307

Query: 316 VVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKL 375
           +VL+TTKGEAIA+GIA+M+T  ++TCDHGVVAK+KR +M+RD YPR+WGLGP++  KK L
Sbjct: 308 IVLITTKGEAIAVGIAQMSTVELSTCDHGVVAKVKRCIMERDVYPRRWGLGPQSMKKKTL 367

Query: 376 IGEGKLDKHGKPNEKTPQEWLRNLVLPTGGDSLVASVFATDTATAKPTAAEETGKDGGGR 435
             EGKLDK+G+PNE TP +W ++ +  +  ++ VA   A   A A PT   E       +
Sbjct: 368 KKEGKLDKYGRPNENTPADWSKSYIDYSDPNAEVAKP-APVVAPAAPTVEAEVNGVEDSK 427

Query: 436 KRKLDEETEAAPGKKLKADKAEDVEEEVGKKEKKKKKKKKDKEKGTAEEPSDEENVENSE 495
           KRK               + +E  E+E  KKE+K++KK+  KEK        +E  E  E
Sbjct: 428 KRK-------------SVESSEKDEDEAAKKEEKRRKKEAKKEK--------KEKKEKKE 474

Query: 496 KKKKKKDKE 504
           KK+KKK  E
Sbjct: 488 KKEKKKKSE 474

[Close]

BLAST of Bhi08G000928 vs. ExPASy Swiss-Prot
Match: P40615 (H/ACA ribonucleoprotein complex subunit DKC1 OS=Rattus norvegicus OX=10116 GN=Dkc1 PE=1 SV=4)

HSP 1 Score: 592.0 bits (1525), Expect = 7.0e-168
Identity = 314/493 (63.69%), Postives = 390/493 (79.11%), Query Frame = 0


Query: 17  DFMIKPSSVAPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGFLPLKRPLAEYIRYGILNL 76
           DF+IKP S A  +DTSQWP+LLKN+DRLNVRT HYTP+P G  PLKR + EY+R G +NL
Sbjct: 36  DFLIKPESKAAQLDTSQWPLLLKNFDRLNVRTTHYTPIPCGSNPLKREIGEYVRTGFINL 95

Query: 77  DKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYV 136
           DKP+NPSSHEVVAWI+RILRV+KTGHSGTLDPKVTG LIVCI+RATRLVKSQQ AGKEYV
Sbjct: 96  DKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYV 155

Query: 137 CVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDVDKHLV 196
            V RLH+A+   ++++RALETLTGA+FQRPPLI+AVKRQLR+RTIYES+++EYD ++ L 
Sbjct: 156 GVVRLHNAIEGTAQLSRALETLTGALFQRPPLIAAVKRQLRVRTIYESRVVEYDPERRLG 215

Query: 197 VFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWVYD 256
           VFW+SCEAGTY+RTLCVHLGL+LGVGG MQELRRVRSG++GE+D+MVTMHDV+DAQ++YD
Sbjct: 216 VFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVVGERDHMVTMHDVLDAQYLYD 275

Query: 257 NFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIGVGEEVV 316
           + +DESYLRRV+ PLE +LTS+KRLV+KDSAVNAICYGAK+M+PGLLR+E+ I V +EVV
Sbjct: 276 HHRDESYLRRVVFPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGLLRYEDGIEVNQEVV 335

Query: 317 LMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIG 376
           ++TTKGEA+ + IA MTTAV++TCDHGVVAKIKRV+M+RDTYPRKWGLGP+AS KK+LI 
Sbjct: 336 VITTKGEAVCVAIALMTTAVISTCDHGVVAKIKRVIMERDTYPRKWGLGPKASQKKQLIK 395

Query: 377 EGKLDKHGKPNEKTPQEWLRNLVLPTGGDSLVASVFATDTATAKPTAAEETGKDGGGRKR 436
           +G LDKHG+P + TP  W R+ V                 ++ K TAAE T   G     
Sbjct: 396 QGLLDKHGRPTDGTPASWTRDYV-------------DYSDSSKKATAAEATPGPG----- 455

Query: 437 KLDEETEAAPGKKLKADKAEDVEE---EVGKKEKKKKKKKKDKEKGTAEEPSDEENVENS 496
                 +AA   K K D   D +E       + KK+KKKKK+K  G  EE +++ + + +
Sbjct: 456 ---VTADAASIVKRKRDSDSDADEATPTTTPRVKKEKKKKKEKADG-GEEAAEDGDGDAT 506

Query: 497 EKKKKKKDKEAKE 507
            KKKKKK + A+E
Sbjct: 516 RKKKKKKARAAEE 506

[Close]

BLAST of Bhi08G000928 vs. ExPASy Swiss-Prot
Match: Q54T81 (Probable H/ACA ribonucleoprotein complex subunit 4 OS=Dictyostelium discoideum OX=44689 GN=nola4 PE=1 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 2.0e-167
Identity = 324/553 (58.59%), Postives = 413/553 (74.68%), Query Frame = 0


Query: 16  VDFMIKPSSVAPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGFLPLKRPLAEYIRYGILN 75
           V+ +IKP    P +DTS+WP+LLKNYD+L+VRTGHYTP+P+G  PLKRP+ EY++YGI+N
Sbjct: 19  VEQVIKPEK-TPILDTSKWPLLLKNYDQLSVRTGHYTPIPNGHSPLKRPIKEYVKYGIIN 78

Query: 76  LDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY 135
           LDKP+NPSSHEVVAWI+ ILRV KTGHSGTLDPKVTG LIVCI+RATRLVKSQQGAGKEY
Sbjct: 79  LDKPSNPSSHEVVAWIRTILRVTKTGHSGTLDPKVTGCLIVCIERATRLVKSQQGAGKEY 138

Query: 136 VCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDVDKHL 195
           + + RLH A+   +++++A++TLTGA+FQRPP  SAVK++LR+RTI+ SKLLE+D +++L
Sbjct: 139 IGIVRLHGAIEGTTELSKAVDTLTGALFQRPPQKSAVKKRLRVRTIHNSKLLEFDPERNL 198

Query: 196 VVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWVY 255
            + W+ CEAGTY+RTLCVH+GL++GVGGHMQELRRVRSGI+ EK   VTMHDV DAQ+ Y
Sbjct: 199 GLIWVDCEAGTYIRTLCVHIGLLMGVGGHMQELRRVRSGIMSEKKGQVTMHDVKDAQYEY 258

Query: 256 DNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIGVGEEV 315
           DN KDESYLRRVI PLE +LT+YKR+VVKDSA+NAICYGAKLMIPGLLR+E DI   EEV
Sbjct: 259 DNSKDESYLRRVIQPLEAILTNYKRIVVKDSAINAICYGAKLMIPGLLRYEQDIESNEEV 318

Query: 316 VLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLI 375
           VL+TTKGEAIA+GIA+MTTA MATCDHGVVA IKRV+MDRD YP +WGLGP+A +KK++I
Sbjct: 319 VLITTKGEAIAIGIAQMTTASMATCDHGVVATIKRVIMDRDVYPVRWGLGPKAKVKKEMI 378

Query: 376 GEGKLDKHGKPNEKTPQEWLRNLVLPTGGDSLVASVFATDTATAKPTAAEETGKDGGGRK 435
            +GKLDK GKPNEKTP +W       TG       V  T T +   +   +T K      
Sbjct: 379 KDGKLDKFGKPNEKTPSDWTNTYTYYTG------QVATTTTTSPVESMNVDTPK------ 438

Query: 436 RKLDEETEAAPGKKLKADKAEDVEEEVGKKEKKKKKKKKDKEKGTAEEPSDEENVENSEK 495
                +  A+   K + + +ED E+ V KKEKK KK+KK   K ++++ S+EE     +K
Sbjct: 439 -----KATASVAVKAEVESSED-EKPVPKKEKKDKKEKK---KDSSDDESEEEKSSKKDK 498

Query: 496 KKKKKDKEAKEAKEAGTPETEKSKKKKKKKDNESGNDDSHIHAADVQNGEADGHVDGSEK 555
           K+KK+ KE KE K +     ++S KK+KK      + D           ++D   + S+K
Sbjct: 499 KEKKEKKEKKEKKSSKDDSDDESSKKEKKDKKRKKSSDK----------DSDSEKESSDK 539

Query: 556 KKKKKKKNKEDAE 569
           K KK KK K+ ++
Sbjct: 559 KDKKDKKEKKKSK 539

[Close]

BLAST of Bhi08G000928 vs. ExPASy TrEMBL
Match: A0A1S3BLH6 (LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103491111 PE=3 SV=1)

HSP 1 Score: 970.7 bits (2508), Expect = 2.7e-279
Identity = 523/569 (91.92%), Postives = 535/569 (94.02%), Query Frame = 0


Query: 2   SSAVGSDEQPWKDVVDFMIKPSSVAPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGFLPL 61
           SSAV SDEQP K+V DFMIKP S  PPVDTSQWPILLKNYDRLNVRTGHYTPLPSG+LPL
Sbjct: 8   SSAVSSDEQPPKEVADFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYLPL 67

Query: 62  KRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRA 121
           KRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRA
Sbjct: 68  KRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRA 127

Query: 122 TRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTI 181
           TRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTI
Sbjct: 128 TRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTI 187

Query: 182 YESKLLEYDVDKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDN 241
           YESKLLEYD +KHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDN
Sbjct: 188 YESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDN 247

Query: 242 MVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPG 301
           MVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPG
Sbjct: 248 MVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPG 307

Query: 302 LLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRK 361
           LLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRK
Sbjct: 308 LLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRK 367

Query: 362 WGLGPRASMKKKLIGEGKLDKHGKPNEKTPQEWLRNLVLPTGGDSLVASVFATDTATAKP 421
           WGLGPRASMK KLIGEGKLDKHGKPNE TPQEWLRNLVLPTGGD LVAS FAT++ATAKP
Sbjct: 368 WGLGPRASMKXKLIGEGKLDKHGKPNENTPQEWLRNLVLPTGGDFLVASAFATESATAKP 427

Query: 422 TAAEETGKDGGGRKRKLDEETEAAPGKKLKADKAEDVEEEVGKKEKKKKKKKKDKEKGTA 481
           TAAEE+GKD GGRKRKLDE+TEAAP KKLK ++     EEVGKKE  KKKKKKDKEKGTA
Sbjct: 428 TAAEESGKDDGGRKRKLDEDTEAAPAKKLKTEEV----EEVGKKE--KKKKKKDKEKGTA 487

Query: 482 EEPSDEENVENSEKKKKKKDKEAKEAKEAGTPETEKSKKKKKKKDNESGNDDSHIHAADV 541
           EEPS+EE VE SEKKKKKKD   KEAKEAGTPET KS+KKKKKKD ESGNDDS + AADV
Sbjct: 488 EEPSNEEIVEYSEKKKKKKD---KEAKEAGTPETPKSEKKKKKKDKESGNDDSQLPAADV 547

Query: 542 QNGEADGHVDGSE-KKKKKKKKNKEDAEE 570
           QNGEA  H DGSE KKKKKKKKNKEDAEE
Sbjct: 548 QNGEAHDHDDGSEKKKKKKKKKNKEDAEE 567

[Close]

BLAST of Bhi08G000928 vs. ExPASy TrEMBL
Match: A0A6J1CVU2 (H/ACA ribonucleoprotein complex subunit 4 OS=Momordica charantia OX=3673 GN=LOC111015035 PE=3 SV=1)

HSP 1 Score: 941.8 bits (2433), Expect = 1.3e-270
Identity = 511/571 (89.49%), Postives = 526/571 (92.12%), Query Frame = 0


Query: 1   MSSAVGSDEQPWKDVVDFMIKPSSVAPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGFLP 60
           +S AVGSDEQP KD  DFMIKP S  PPVDTSQWPILLKNYDRLNVRTGHYTPLPSG+ P
Sbjct: 23  VSPAVGSDEQPQKDAADFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYSP 82

Query: 61  LKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDR 120
           LKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDR
Sbjct: 83  LKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDR 142

Query: 121 ATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRT 180
           ATRLVKSQQGAGKEYVC+ARLHS+VPDV+KV+RALETLTGAVFQRPPLISAVKRQLRIRT
Sbjct: 143 ATRLVKSQQGAGKEYVCIARLHSSVPDVAKVSRALETLTGAVFQRPPLISAVKRQLRIRT 202

Query: 181 IYESKLLEYDVDKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKD 240
           IYESKLLEYD +KHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKD
Sbjct: 203 IYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKD 262

Query: 241 NMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIP 300
           NMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIP
Sbjct: 263 NMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIP 322

Query: 301 GLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPR 360
           GLLRFENDI VGEEVVLMTTKGEAIALGIAEMTTAVMATCDHG+VAKIKRVVMDRDTYPR
Sbjct: 323 GLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGIVAKIKRVVMDRDTYPR 382

Query: 361 KWGLGPRASMKKKLIGEGKLDKHGKPNEKTPQEWLRNLVLPTGGDSLVASVFATDTATAK 420
           KWGLGPRASMKKKLIGEGKLDKHGKPNE TPQEWLRNLVLPTGGDSLVAS FA D A   
Sbjct: 383 KWGLGPRASMKKKLIGEGKLDKHGKPNENTPQEWLRNLVLPTGGDSLVASHFAADAA--- 442

Query: 421 PTAAEETGKDGGGRKRKLDEETEAAPGKKLKADKAEDVEE--EVGKKEKKKKKKKKDKEK 480
               +ET KDGGGRKRKLDE+ EAAP KKLK +KAE+ EE  EVGKKE  KKKKKKDKEK
Sbjct: 443 DEGKQETEKDGGGRKRKLDEDMEAAPTKKLKTEKAEEAEEVDEVGKKE--KKKKKKDKEK 502

Query: 481 GTAEEPSDEENVENSEKKKKKKDKEAKEAKEAGTPETEKSKKKKKKKDNESGNDDSHIHA 540
           G   EP+DEENVE SEKKKKKKD   KEAKEAGTPETEKS+KKKKKKD ESGND S    
Sbjct: 503 GNV-EPADEENVEKSEKKKKKKD---KEAKEAGTPETEKSEKKKKKKDKESGNDHSQ-SP 562

Query: 541 ADVQNGEADGHVDGSEKKKKKKKKNKEDAEE 570
           A +QNGEADGHVDGSEKKKKKKKKNK DAEE
Sbjct: 563 AGIQNGEADGHVDGSEKKKKKKKKNK-DAEE 582

[Close]

BLAST of Bhi08G000928 vs. ExPASy TrEMBL
Match: A0A6J1J6M3 (H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita maxima OX=3661 GN=LOC111481852 PE=3 SV=1)

HSP 1 Score: 938.3 bits (2424), Expect = 1.5e-269
Identity = 510/571 (89.32%), Postives = 524/571 (91.77%), Query Frame = 0


Query: 1   MSSAVGSDEQPWKDVVDFMIKPSSVAPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGFLP 60
           +S AVGSDEQP KDV DFMIKP S  P VDTSQWPILLKNYDRLNVRTGHYTPLPSGF P
Sbjct: 23  VSPAVGSDEQPPKDVADFMIKPQSFTPSVDTSQWPILLKNYDRLNVRTGHYTPLPSGFSP 82

Query: 61  LKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDR 120
           LKRPLA+YIRYGILNLDKPANPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGNLIVCIDR
Sbjct: 83  LKRPLADYIRYGILNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDR 142

Query: 121 ATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRT 180
           ATRLVKSQQGAGKEYVCVARLHS+VPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRT
Sbjct: 143 ATRLVKSQQGAGKEYVCVARLHSSVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRT 202

Query: 181 IYESKLLEYDVDKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKD 240
           IYESKLLEYD DKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKD
Sbjct: 203 IYESKLLEYDADKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKD 262

Query: 241 NMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIP 300
           NMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIP
Sbjct: 263 NMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIP 322

Query: 301 GLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPR 360
           GLLRFENDI VGEEVVLMTTKGEAIALGIAEMTT+VMATCDHGVVAKIKRVVMDRDTYPR
Sbjct: 323 GLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTSVMATCDHGVVAKIKRVVMDRDTYPR 382

Query: 361 KWGLGPRASMKKKLIGEGKLDKHGKPNEKTPQEWLRNLVLPTGGDSLVASVFATDTATAK 420
           KWGLGPRASMKKKLIGEGKLDKHGKPNEKTP EW+RNLVLPTGGDSLVASVFATD+AT  
Sbjct: 383 KWGLGPRASMKKKLIGEGKLDKHGKPNEKTPSEWMRNLVLPTGGDSLVASVFATDSATV- 442

Query: 421 PTAAEETGKDGGGRKRKLDEETEAAPGKKLKADKAEDVEE-EVGKKEKKKKKKKKDKEKG 480
               +ET KDGGGRKRKLDEETEAAP KKLKA+K ED EE E G K++KKKKKKKDKEKG
Sbjct: 443 DEGKQETEKDGGGRKRKLDEETEAAPAKKLKAEKTEDAEEVEEGGKKEKKKKKKKDKEKG 502

Query: 481 TAEEPSDEENVENSEKKKKKKDKEAKEAKEAGTP-ETEKSKKKKKKKDNESGNDDSHIHA 540
           +  EPSDEEN E SEKKKKK     KE KEAGTP E +KS+KKKKKKD ESG        
Sbjct: 503 SG-EPSDEENTEQSEKKKKKD----KEGKEAGTPEEKQKSEKKKKKKDKESG-------V 562

Query: 541 ADVQNGEADGHVDGSEKKKKKKKKNKEDAEE 570
            DVQNGEAD HVDGSEKKKKKKKKNKEDAEE
Sbjct: 563 GDVQNGEADDHVDGSEKKKKKKKKNKEDAEE 580

[Close]

BLAST of Bhi08G000928 vs. ExPASy TrEMBL
Match: A0A6J1F3Q2 (H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita moschata OX=3662 GN=LOC111441884 PE=3 SV=1)

HSP 1 Score: 937.9 bits (2423), Expect = 1.9e-269
Identity = 508/570 (89.12%), Postives = 523/570 (91.75%), Query Frame = 0


Query: 1   MSSAVGSDEQPWKDVVDFMIKPSSVAPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGFLP 60
           +S AVGSDEQP KDV DFMIKP S  PPVDTSQWPILLKNYDRLNVRTGHYTPLPSGF P
Sbjct: 23  VSPAVGSDEQPPKDVADFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGFSP 82

Query: 61  LKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDR 120
           LKRPLA+YIRYGILNLDKPANPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGNLIVCIDR
Sbjct: 83  LKRPLADYIRYGILNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDR 142

Query: 121 ATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRT 180
           ATRLVKSQQGAGKEYVCVARLHS+VPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRT
Sbjct: 143 ATRLVKSQQGAGKEYVCVARLHSSVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRT 202

Query: 181 IYESKLLEYDVDKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKD 240
           IYESKLLEYD DKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKD
Sbjct: 203 IYESKLLEYDADKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKD 262

Query: 241 NMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIP 300
           NMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIP
Sbjct: 263 NMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIP 322

Query: 301 GLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPR 360
           GLLRFENDI VGEEVVLMTTKGEAIALGIAEMTT+VMATCDHGVVAKIKRVVMDRDTYPR
Sbjct: 323 GLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTSVMATCDHGVVAKIKRVVMDRDTYPR 382

Query: 361 KWGLGPRASMKKKLIGEGKLDKHGKPNEKTPQEWLRNLVLPTGGDSLVASVFATDTATAK 420
           KWGLGPRASMKKKLIGEGKLDKHGKPNEKTP EW+RNLVLPTGGDSLVASVFA+D+AT  
Sbjct: 383 KWGLGPRASMKKKLIGEGKLDKHGKPNEKTPSEWMRNLVLPTGGDSLVASVFASDSATV- 442

Query: 421 PTAAEETGKDGGGRKRKLDEETEAAPGKKLKADKAEDVEEEVGKKEKKKKKKKKDKEKGT 480
               +ET KDGGGRKRKLDEETEAAP KKLKA+K ED EE     +K+KKKKKKDKEKG+
Sbjct: 443 DEGKQETEKDGGGRKRKLDEETEAAPAKKLKAEKTEDAEEVEEGGKKEKKKKKKDKEKGS 502

Query: 481 AEEPSDEENVENSEKKKKKKDKEAKEAKEAGTP-ETEKSKKKKKKKDNESGNDDSHIHAA 540
             EPSDEEN    EKKKKKKD   KE KEAGTP ET+KS+KKKKKKD ESG         
Sbjct: 503 G-EPSDEENTVRLEKKKKKKD---KEGKEAGTPEETQKSEKKKKKKDKESG-------VG 562

Query: 541 DVQNGEADGHVDGSEKKKKKKKKNKEDAEE 570
           DVQNGEAD HVDGSEKKKKKKKKNKEDAEE
Sbjct: 563 DVQNGEADDHVDGSEKKKKKKKKNKEDAEE 580

[Close]

BLAST of Bhi08G000928 vs. ExPASy TrEMBL
Match: A0A6J1FP65 (H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita moschata OX=3662 GN=LOC111446978 PE=3 SV=1)

HSP 1 Score: 922.5 bits (2383), Expect = 8.3e-265
Identity = 503/572 (87.94%), Postives = 521/572 (91.08%), Query Frame = 0


Query: 1   MSSAVGSDEQPWKDVVDFMIKPSSVAPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGFLP 60
           +S  VGSDEQP KDV DF+IKP S  PPVDTSQWPILLKNYDRLNVRTGHYTPLPSGF P
Sbjct: 23  VSPVVGSDEQPLKDVADFLIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGFSP 82

Query: 61  LKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDR 120
           LKRPL +YIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDR
Sbjct: 83  LKRPLIDYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDR 142

Query: 121 ATRLVKSQQGAGKEYVCVARLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRT 180
           ATRLVKSQQGAGKEYVCVARLHSAVPDV+KVARALETLTGAVFQRPPLISAVKRQLRIRT
Sbjct: 143 ATRLVKSQQGAGKEYVCVARLHSAVPDVAKVARALETLTGAVFQRPPLISAVKRQLRIRT 202

Query: 181 IYESKLLEYDVDKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKD 240
           IYESKLLEYD DKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKD
Sbjct: 203 IYESKLLEYDADKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKD 262

Query: 241 NMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIP 300
           NMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIP
Sbjct: 263 NMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIP 322

Query: 301 GLLRFENDIGVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPR 360
           GLLRFENDI VGEEVVLMTTKGEAIALGIAEMTT+VMATCDHG+VAKIKRVVMDRDTYPR
Sbjct: 323 GLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTSVMATCDHGIVAKIKRVVMDRDTYPR 382

Query: 361 KWGLGPRASMKKKLIGEGKLDKHGKPNEKTPQEWLRNLVLPTGGDSLVASVFATDTATAK 420
           KWGLGPRASMKKKLIGEGKLDKHGKPNE TPQEWLRNLVLPTGGDSLVASVFA+DTAT K
Sbjct: 383 KWGLGPRASMKKKLIGEGKLDKHGKPNENTPQEWLRNLVLPTGGDSLVASVFASDTATPK 442

Query: 421 PTAAEETGKDGGGRKRKLDEETE-AAPGKKLKADKAEDVEEEVGKKEKKKKKKKKDKEKG 480
            + A +  KDG GRKRK DEETE AAP KKLK +K E+ EE     +K+KKKKKKDKEKG
Sbjct: 443 QSVAADEEKDGVGRKRKHDEETEAAAPAKKLKGEKVEEAEEIEESGKKEKKKKKKDKEKG 502

Query: 481 TAEEPSDEENVENSEKKKKKKDKEAKEAKEAGTPETEKS-KKKKKKKDNESGNDDSHIHA 540
              E SD+E  E SEKKKKKKDK+AKE  EAGTPETEKS KKKKKKKD ESGN       
Sbjct: 503 -GIEASDDEKAEKSEKKKKKKDKDAKE--EAGTPETEKSEKKKKKKKDKESGN------- 562

Query: 541 ADVQNGEADGHVD-GSEKKKKKKKKNKEDAEE 570
            D QNGEA+GHVD GSEKKKKKKKKNKE+A+E
Sbjct: 563 -DTQNGEAEGHVDGGSEKKKKKKKKNKEEADE 583

The following BLAST results are available for this feature:

BLAST of Bhi08G000928 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57150.1	2.6e-218	74.19	homologue of NAP57	[more]
AT5G14460.1	2.2e-20	31.19	Pseudouridine synthase family protein	[more]

BLAST of Bhi08G000928 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LD90	3.6e-217	74.19	H/ACA ribonucleoprotein complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=CBF...	[more]
Q5ZJH9	2.6e-170	64.03	H/ACA ribonucleoprotein complex subunit DKC1 OS=Gallus gallus OX=9031 GN=DKC1 PE...	[more]
O14007	8.2e-169	64.01	H/ACA ribonucleoprotein complex subunit cbf5 OS=Schizosaccharomyces pombe (strai...	[more]
P40615	7.0e-168	63.69	H/ACA ribonucleoprotein complex subunit DKC1 OS=Rattus norvegicus OX=10116 GN=Dk...	[more]
Q54T81	2.0e-167	58.59	Probable H/ACA ribonucleoprotein complex subunit 4 OS=Dictyostelium discoideum O...	[more]

BLAST of Bhi08G000928 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BLH6	2.7e-279	91.92	LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex subunit 4 OS=Cucumis melo O...	[more]
A0A6J1CVU2	1.3e-270	89.49	H/ACA ribonucleoprotein complex subunit 4 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1J6M3	1.5e-269	89.32	H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1F3Q2	1.9e-269	89.12	H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1FP65	8.3e-265	87.94	H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita moschata OX=3662 GN=...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 455..475
None	No IPR available	COILS	Coil	Coil	coord: 550..569
None	No IPR available	COILS	Coil	Coil	coord: 490..510
None	No IPR available	GENE3D	3.30.2350.10	Pseudouridine synthase	coord: 64..270 e-value: 9.1E-181 score: 602.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 417..569
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 476..554
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 427..466
None	No IPR available	PANTHER	PTHR23127:SF3	H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 4	coord: 17..515
None	No IPR available	PROSITE	PS50890	PUA	coord: 278..353 score: 18.908768
None	No IPR available	CDD	cd02572	PseudoU_synth_hDyskerin	coord: 70..252 e-value: 8.1322E-134 score: 385.461
IPR012960	Dyskerin-like	SMART	SM01136	DKCLD_2	coord: 30..88 e-value: 6.0E-33 score: 125.5
IPR012960	Dyskerin-like	PFAM	PF08068	DKCLD	coord: 31..88 e-value: 5.1E-30 score: 103.3
IPR002478	PUA domain	SMART	SM00359	pua_5	coord: 279..353 e-value: 1.0E-23 score: 94.8
IPR002478	PUA domain	PFAM	PF01472	PUA	coord: 279..351 e-value: 1.2E-20 score: 73.3
IPR032819	tRNA pseudouridylate synthase B, C-terminal	PFAM	PF16198	TruB_C_2	coord: 209..275 e-value: 1.2E-22 score: 79.8
IPR002501	Pseudouridine synthase II, N-terminal	PFAM	PF01509	TruB_N	coord: 92..208 e-value: 3.5E-19 score: 69.6
IPR036974	PUA domain superfamily	GENE3D	2.30.130.10	PUA domain	coord: 31..362 e-value: 9.1E-181 score: 602.1
IPR004802	tRNA pseudouridine synthase B family	TIGRFAM	TIGR00425	TIGR00425	coord: 38..363 e-value: 4.7E-160 score: 529.9
IPR004802	tRNA pseudouridine synthase B family	PANTHER	PTHR23127	CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5	coord: 17..515
IPR004521	Uncharacterised domain CHP00451	TIGRFAM	TIGR00451	TIGR00451	coord: 275..350 e-value: 5.2E-8 score: 31.1
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 31..276
IPR015947	PUA-like superfamily	SUPERFAMILY	88697	PUA domain-like	coord: 278..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000928	Bhi08M000928	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000495	box H/ACA RNA 3'-end processing
biological_process	GO:1990481	mRNA pseudouridine synthesis
biological_process	GO:0031118	rRNA pseudouridine synthesis
biological_process	GO:0031120	snRNA pseudouridine synthesis
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0009451	RNA modification
biological_process	GO:0006396	RNA processing
cellular_component	GO:0031429	box H/ACA snoRNP complex
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding