Bhi08G000781 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G000781
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	photosystem I subunit F
Location	chr8: 30491378 .. 30492954 (-)
RNA-Seq Expression	Bhi08G000781
Synteny	Bhi08G000781

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCAATTACAACAATCCAACTCAGCTTCCCTTACTCTCTTCATCTTATCCAAATCCTTTCTTCTCCACCACTAATCTCATGATCCTCTCTGAATCTAAAACCGTTCCCTCCACACTCTTTCCCCAAATCTCCTTCTTCTTTCTCCTTCAACAATTCCCAAACCCTTCAAACCCATTTCACATCTCTCAACAATGTCTCTCACAATCCCCACTAATCTCTCAAAACCCCTCTTGAAGCCCAAATTGAGCTCCCCATTGCCCTCAAAGCCAAAACCCTCTTCCTCAATCCTCTGCTCCGCCACTCAAAACCAAAACCAAAACCCATCTTCCTCTCTTCAGGCCTTCTCCGCCGCCTTGGCTCTCTCCTCCATCCTCCTCTCTGCCCCTCTCCCCGCCGTCGCCGACATCTCCGGCCTCACCCCCTGCAAGGAATCCAAGCAATTCGCCAAGCGAGAGAAGCAGCAGATCAAGAAACTTGAGTCCTCTTTGAAGAATTACGCTCCCGATAGCGCCCCGGCGCTTGCCCTTAAAGCGACGATTGAGAAGACGAAGAGACGATTCGCCTTCTATGGGAATCAAGGACTTCTTTGTGGGGCTGATGGGTTGCCTCATTTGATTGTGAGTGGTGACCAGAGGCATTGGGGTGAGTTTATAACTCCTGGGTTCTTGTTCCTTTACATTGCTGGGTGGATTGGATGGGTTGGAAGGAGCTACTTAATCGCCATTAGAGGTGATAAGAAGCCTACCCAGAAGGAGATTATCATTGATGTTCCTTTGGCTACTAGTTTGGTGTTCAGAGGCTTTAGCTGGCCTGTTGCTGCTTACAGAGAGCTTGTTAATGGTGAACTCATTGCCAAGGATGTCTAATTCTCCCCCTTCAGGTACTACTCCTATATATATGTATATAATATATATACTGTAACTTCTTAGGTCAATAGAGTAATAGAATAGATGGTTATATGTTTGGATTGTTTCCATGACCAATCTTCTCATTTGATTATTAGATATACTAAGTTTCTTAATTTAATGATCCACATAATATTAGAGCACATGGTTCTATGTTCTACCTGTCGTAACACCATTTCCTTAATTGATATTGATATTTATTTGATAGTATTAGTGATTTTCGAGTCAAAGTAAAGAGAGATCTTATAATGTAATCCATATACTTAAATTTTTAGATTTAATGGTGATTTAAGTACGAAAATGGTGAAATGTGTATTATTAGTTTGTGTTTTTTAATGAGCAATTTCTCTATGTTTGTTTTTCCAATGGTCAATCTTCTCATTTGTTTCATCATATTGTTTTGACAGAGATAGGGAAAGTGGAAGAGGGGTTGACTTTTGGAGGACATTGAGGAATGGGAAGGGGTTTGTGAAATATTTGTGTATTTAATTTGGAAACTTGACATGAGTATATGTAATGGTTGGTTGTGTTGGATACAAAGGGCAATCTATTCTTTTCACTTCCCCATTCTTTGTATTCAATTTTTTCTAACATTATTGACCCATCAATATTTTCTTAAGTAATTAGTTACACAATGTCATTCACATTATTAATATTGATGTTTTGAAAGAG

mRNA sequence

GCCAATTACAACAATCCAACTCAGCTTCCCTTACTCTCTTCATCTTATCCAAATCCTTTCTTCTCCACCACTAATCTCATGATCCTCTCTGAATCTAAAACCGTTCCCTCCACACTCTTTCCCCAAATCTCCTTCTTCTTTCTCCTTCAACAATTCCCAAACCCTTCAAACCCATTTCACATCTCTCAACAATGTCTCTCACAATCCCCACTAATCTCTCAAAACCCCTCTTGAAGCCCAAATTGAGCTCCCCATTGCCCTCAAAGCCAAAACCCTCTTCCTCAATCCTCTGCTCCGCCACTCAAAACCAAAACCAAAACCCATCTTCCTCTCTTCAGGCCTTCTCCGCCGCCTTGGCTCTCTCCTCCATCCTCCTCTCTGCCCCTCTCCCCGCCGTCGCCGACATCTCCGGCCTCACCCCCTGCAAGGAATCCAAGCAATTCGCCAAGCGAGAGAAGCAGCAGATCAAGAAACTTGAGTCCTCTTTGAAGAATTACGCTCCCGATAGCGCCCCGGCGCTTGCCCTTAAAGCGACGATTGAGAAGACGAAGAGACGATTCGCCTTCTATGGGAATCAAGGACTTCTTTGTGGGGCTGATGGGTTGCCTCATTTGATTGTGAGTGGTGACCAGAGGCATTGGGGTGAGTTTATAACTCCTGGGTTCTTGTTCCTTTACATTGCTGGGTGGATTGGATGGGTTGGAAGGAGCTACTTAATCGCCATTAGAGGTGATAAGAAGCCTACCCAGAAGGAGATTATCATTGATGTTCCTTTGGCTACTAGTTTGGTGTTCAGAGGCTTTAGCTGGCCTGTTGCTGCTTACAGAGAGCTTGTTAATGGTGAACTCATTGCCAAGGATGTCTAATTCTCCCCCTTCAGAGATAGGGAAAGTGGAAGAGGGGTTGACTTTTGGAGGACATTGAGGAATGGGAAGGGGTTTGTGAAATATTTGTGTATTTAATTTGGAAACTTGACATGAGTATATGTAATGGTTGGTTGTGTTGGATACAAAGGGCAATCTATTCTTTTCACTTCCCCATTCTTTGTATTCAATTTTTTCTAACATTATTGACCCATCAATATTTTCTTAAGTAATTAGTTACACAATGTCATTCACATTATTAATATTGATGTTTTGAAAGAG

Coding sequence (CDS)

ATGTCTCTCACAATCCCCACTAATCTCTCAAAACCCCTCTTGAAGCCCAAATTGAGCTCCCCATTGCCCTCAAAGCCAAAACCCTCTTCCTCAATCCTCTGCTCCGCCACTCAAAACCAAAACCAAAACCCATCTTCCTCTCTTCAGGCCTTCTCCGCCGCCTTGGCTCTCTCCTCCATCCTCCTCTCTGCCCCTCTCCCCGCCGTCGCCGACATCTCCGGCCTCACCCCCTGCAAGGAATCCAAGCAATTCGCCAAGCGAGAGAAGCAGCAGATCAAGAAACTTGAGTCCTCTTTGAAGAATTACGCTCCCGATAGCGCCCCGGCGCTTGCCCTTAAAGCGACGATTGAGAAGACGAAGAGACGATTCGCCTTCTATGGGAATCAAGGACTTCTTTGTGGGGCTGATGGGTTGCCTCATTTGATTGTGAGTGGTGACCAGAGGCATTGGGGTGAGTTTATAACTCCTGGGTTCTTGTTCCTTTACATTGCTGGGTGGATTGGATGGGTTGGAAGGAGCTACTTAATCGCCATTAGAGGTGATAAGAAGCCTACCCAGAAGGAGATTATCATTGATGTTCCTTTGGCTACTAGTTTGGTGTTCAGAGGCTTTAGCTGGCCTGTTGCTGCTTACAGAGAGCTTGTTAATGGTGAACTCATTGCCAAGGATGTCTAA

Protein sequence

MSLTIPTNLSKPLLKPKLSSPLPSKPKPSSSILCSATQNQNQNPSSSLQAFSAALALSSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALALKATIEKTKRRFAFYGNQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRGDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV

Homology

[Close]

BLAST of Bhi08G000781 vs. TAIR 10
Match: AT1G31330.1 (photosystem I subunit F )

HSP 1 Score: 321.2 bits (822), Expect = 6.4e-88
Identity = 168/225 (74.67%), Postives = 190/225 (84.44%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSPL-PSKPKPSSSILCSATQNQNQNPSSSLQAFSAALALSS 60
           MSLTIP NL   +L P+ +  L  S PK S+  +CS  ++ +  P  S++AFSAA+ALSS
Sbjct: 1   MSLTIPANL---VLNPRSNKSLTQSVPKSSARFVCSDDKSSSSTP-QSMKAFSAAVALSS 60

Query: 61  ILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALALKATIEKT 120
           ILLSAP+PAVADISGLTPCK+SKQFAKREKQQIKKLESSLK YAP+SAPALAL A IEKT
Sbjct: 61  ILLSAPMPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALALNAQIEKT 120

Query: 121 KRRFAFYGNQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR 180
           KRRF  YG  GLLCG+DGLPHLIV+GDQRHWGEFITPG LFLYIAGWIGWVGRSYLIAI 
Sbjct: 121 KRRFDNYGKYGLLCGSDGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIS 180

Query: 181 GDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           G+KKP  KEIIIDVPLA+ ++FRGF WPVAAYRE +NG+LIAKDV
Sbjct: 181 GEKKPAMKEIIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 221

[Close]

BLAST of Bhi08G000781 vs. ExPASy Swiss-Prot
Match: Q9SHE8 (Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAF PE=1 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 9.0e-87
Identity = 168/225 (74.67%), Postives = 190/225 (84.44%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSPL-PSKPKPSSSILCSATQNQNQNPSSSLQAFSAALALSS 60
           MSLTIP NL   +L P+ +  L  S PK S+  +CS  ++ +  P  S++AFSAA+ALSS
Sbjct: 1   MSLTIPANL---VLNPRSNKSLTQSVPKSSARFVCSDDKSSSSTP-QSMKAFSAAVALSS 60

Query: 61  ILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALALKATIEKT 120
           ILLSAP+PAVADISGLTPCK+SKQFAKREKQQIKKLESSLK YAP+SAPALAL A IEKT
Sbjct: 61  ILLSAPMPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALALNAQIEKT 120

Query: 121 KRRFAFYGNQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR 180
           KRRF  YG  GLLCG+DGLPHLIV+GDQRHWGEFITPG LFLYIAGWIGWVGRSYLIAI 
Sbjct: 121 KRRFDNYGKYGLLCGSDGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIS 180

Query: 181 GDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           G+KKP  KEIIIDVPLA+ ++FRGF WPVAAYRE +NG+LIAKDV
Sbjct: 181 GEKKPAMKEIIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 221

[Close]

BLAST of Bhi08G000781 vs. ExPASy Swiss-Prot
Match: P46486 (Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia OX=4227 GN=PSAF PE=2 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 5.0e-85
Identity = 173/228 (75.88%), Postives = 192/228 (84.21%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKL-SSPLPSKPK-PSSSILCSATQNQ---NQNPSSSLQAFSAAL 60
           MS TI T+  +PL    L SSP+ SK K  S+SI+CS + ++   N +  SSL+A SAAL
Sbjct: 1   MSFTISTSFLQPLEISNLKSSPITSKSKVTSTSIVCSGSTDEKINNADGKSSLKALSAAL 60

Query: 61  ALSSILLSA---PLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAL 120
           ALSSIL+S+    LPA ADISGLTPCKESKQFAKREKQ +KKLESSLK YAPDSAPALA+
Sbjct: 61  ALSSILVSSTVPALPASADISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPALAI 120

Query: 121 KATIEKTKRRFAFYGNQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGR 180
           KAT+EKTKRRF  YG QGLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGR
Sbjct: 121 KATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR 180

Query: 181 SYLIAIRGDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELI 221
           SYLIAIR +KKPTQKEIIIDVPLAT L+FRGFSWPVAAYRE +NGELI
Sbjct: 181 SYLIAIRDEKKPTQKEIIIDVPLATKLLFRGFSWPVAAYREYLNGELI 228

[Close]

BLAST of Bhi08G000781 vs. ExPASy Swiss-Prot
Match: P12355 (Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAF PE=1 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.7e-80
Identity = 167/230 (72.61%), Postives = 185/230 (80.43%), Query Frame = 0


Query: 1   MSLTIPTNLSKPL-LKPK-LSSPLPSKPKPSSSILCSATQNQNQNPSSSLQAF----SAA 60
           MS TIPTNL KPL  KPK LSS   S   P S I+C    +Q Q     L       +AA
Sbjct: 1   MSFTIPTNLYKPLATKPKHLSS---SSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAA 60

Query: 61  LALSSILLS----APLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPAL 120
           LALSS+LLS    AP  A+ADI+GLTPCKESKQFAKREKQ +KKL++SLK YA DSAPAL
Sbjct: 61  LALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPAL 120

Query: 121 ALKATIEKTKRRFAFYGNQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWV 180
           A+KAT+EKTK+RF  YG  GLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWV
Sbjct: 121 AIKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWV 180

Query: 181 GRSYLIAIRGDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELI 221
           GRSYLIAIR +KKPTQKEIIIDVPLA+SL+FRGFSWPVAAYREL+NGEL+
Sbjct: 181 GRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 227

[Close]

BLAST of Bhi08G000781 vs. ExPASy Swiss-Prot
Match: P13192 (Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAF PE=1 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 6.5e-77
Identity = 147/215 (68.37%), Postives = 170/215 (79.07%), Query Frame = 0


Query: 19  SSPLPSKPKPSSSILCSATQNQNQNP------SSSLQAFSAALALSSILLS----APLPA 78
           + P  S+P    S+ CSA+   N N       S+S++ FSAALALSS+LLS    +P PA
Sbjct: 16  AKPRLSRPPARLSVSCSASSGDNNNSTATPSLSASIKTFSAALALSSVLLSSAATSPPPA 75

Query: 79  VADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALALKATIEKTKRRFAFYGN 138
            ADI+GLTPCKESK FAKREKQ +KKL SSLK YAPDSAPALA++ATI+KTKRRF  YG 
Sbjct: 76  AADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGK 135

Query: 139 QGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRGDKKPTQKE 198
            GLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGRSYLIA+ G+KKP  +E
Sbjct: 136 FGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMRE 195

Query: 199 IIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKD 224
           IIIDV LA  ++ RGF WPVAAYREL+NG+L+  D
Sbjct: 196 IIIDVELAARIIPRGFIWPVAAYRELINGDLVVDD 230

[Close]

BLAST of Bhi08G000781 vs. ExPASy Swiss-Prot
Match: P12356 (Photosystem I reaction center subunit III, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PSAF PE=1 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.0e-50
Identity = 110/211 (52.13%), Postives = 143/211 (67.77%), Query Frame = 0


Query: 17  KLSSPLPSKPKPSSSILCSATQNQNQNPSSSLQAFSAALALSSILLSAPLPAVADISGLT 76
           K SS +    + +  + C A +N+  +   +  A SA  A  ++ LSAP  A+ADI+GLT
Sbjct: 11  KASSRVAPSSRRALRVACQAQKNETASKVGTALAASALAA--AVSLSAPSAAMADIAGLT 70

Query: 77  PCKESKQFAKREKQQIKKLESSLKNYAPDSAPALALKATIEKTKRRFAFYGNQGLLCGAD 136
           PC ESK +AK EK+++K LE  LK Y  DSAPA+ALKAT+E+TK RFA Y   GLLCG D
Sbjct: 71  PCSESKAYAKLEKKELKTLEKRLKQYEADSAPAVALKATMERTKARFANYAKAGLLCGND 130

Query: 137 GLPHLI----VSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRGDKKPTQKEIIID 196
           GLPHLI    ++    H GE   P F FLY+AG+IG+VGR YLIA++G+ KPT KEIIID
Sbjct: 131 GLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKPTDKEIIID 190

Query: 197 VPLATSLVFRGFSWPVAAYRELVNGELIAKD 224
           VPLAT L ++G  WP+AA +EL  G L+ K+
Sbjct: 191 VPLATKLAWQGAGWPLAAVQELQRGTLLEKE 219

[Close]

BLAST of Bhi08G000781 vs. ExPASy TrEMBL
Match: A0A0A0M3X2 (PSI-F OS=Cucumis sativus OX=3659 GN=Csa_1G714680 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.0e-113
Identity = 215/224 (95.98%), Postives = 218/224 (97.32%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSPLPSKPKPSSSILCSATQNQNQNPSSSLQAFSAALALSSI 60
           MSLTIPTNLSKPLLKPK SSPL  KPKPSSSILCSA+QNQNQN SSSLQAFSAALALSSI
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI 60

Query: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALALKATIEKTK 120
           LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALA+KATIEKTK
Sbjct: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120

Query: 121 RRFAFYGNQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRG 180
           RRFAFYG QGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR 
Sbjct: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180

Query: 181 DKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           +KKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224

[Close]

BLAST of Bhi08G000781 vs. ExPASy TrEMBL
Match: A0A5D3E1S6 (PSI-F OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00570 PE=3 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.2e-112
Identity = 215/226 (95.13%), Postives = 219/226 (96.90%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSPLPSKPKPSSSILCSA--TQNQNQNPSSSLQAFSAALALS 60
           MSLTIPTNLSKPLLKPKLSSPL  KPKPSSSILCSA   QNQ+QNPSSSLQAFSAALALS
Sbjct: 1   MSLTIPTNLSKPLLKPKLSSPLALKPKPSSSILCSAFPNQNQSQNPSSSLQAFSAALALS 60

Query: 61  SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALALKATIEK 120
           SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLES+LKNYAPDSAPALA+KATIEK
Sbjct: 61  SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESALKNYAPDSAPALAIKATIEK 120

Query: 121 TKRRFAFYGNQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI 180
           TKRRFAFYG QGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI
Sbjct: 121 TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI 180

Query: 181 RGDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           R +KKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 RNEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 226

[Close]

BLAST of Bhi08G000781 vs. ExPASy TrEMBL
Match: A0A1S3C8V6 (PSI-F OS=Cucumis melo OX=3656 GN=LOC103498296 PE=3 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.2e-112
Identity = 215/226 (95.13%), Postives = 219/226 (96.90%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSPLPSKPKPSSSILCSA--TQNQNQNPSSSLQAFSAALALS 60
           MSLTIPTNLSKPLLKPKLSSPL  KPKPSSSILCSA   QNQ+QNPSSSLQAFSAALALS
Sbjct: 1   MSLTIPTNLSKPLLKPKLSSPLALKPKPSSSILCSAFPNQNQSQNPSSSLQAFSAALALS 60

Query: 61  SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALALKATIEK 120
           SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLES+LKNYAPDSAPALA+KATIEK
Sbjct: 61  SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESALKNYAPDSAPALAIKATIEK 120

Query: 121 TKRRFAFYGNQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI 180
           TKRRFAFYG QGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI
Sbjct: 121 TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI 180

Query: 181 RGDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           R +KKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 RNEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 226

[Close]

BLAST of Bhi08G000781 vs. ExPASy TrEMBL
Match: A0A6J1K487 (PSI-F OS=Cucurbita maxima OX=3661 GN=LOC111490506 PE=3 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 6.0e-110
Identity = 207/224 (92.41%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSPLPSKPKPSSSILCSATQNQNQNPSSSLQAFSAALALSSI 60
           MSLTIPTNLSKPLLKPK SS L SK +PSSSILCSATQNQN+  SSSLQAFSAALALSSI
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSSLASKSRPSSSILCSATQNQNETASSSLQAFSAALALSSI 60

Query: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALALKATIEKTK 120
           LLSAPLPAVADI+GLTPCK+SKQFAKREKQQIKKLESSLKNYAPDSAPALA++A++EKTK
Sbjct: 61  LLSAPLPAVADIAGLTPCKDSKQFAKREKQQIKKLESSLKNYAPDSAPALAIQASVEKTK 120

Query: 121 RRFAFYGNQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRG 180
           RRFAFYG QGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR 
Sbjct: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180

Query: 181 DKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           DKKPTQKEIIIDVPLATSLVFRGFSWP+AAYRELVNGELIAKDV
Sbjct: 181 DKKPTQKEIIIDVPLATSLVFRGFSWPIAAYRELVNGELIAKDV 224

[Close]

BLAST of Bhi08G000781 vs. ExPASy TrEMBL
Match: A0A6J1GT12 (PSI-F OS=Cucurbita moschata OX=3662 GN=LOC111457171 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.1e-108
Identity = 207/227 (91.19%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKLSSPLPSKPKPSSSILCSATQNQN---QNPSSSLQAFSAALAL 60
           MSLTIPTNLSKPLLKPK SS L SK +PSSSILCSATQNQN   +N SSSLQAFSAALAL
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSSLASKSRPSSSILCSATQNQNGSPENASSSLQAFSAALAL 60

Query: 61  SSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALALKATIE 120
           SSILLSAPLPAVADI+GLTPCK+SKQFAKREKQQIKKLESSLKNYAPDSAPALA++A++E
Sbjct: 61  SSILLSAPLPAVADIAGLTPCKDSKQFAKREKQQIKKLESSLKNYAPDSAPALAIQASVE 120

Query: 121 KTKRRFAFYGNQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA 180
           KTKRRFAFYG QGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA
Sbjct: 121 KTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA 180

Query: 181 IRGDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           IR DKKPTQKEIIIDVPLATSLVFRGFSWP+AAYRELVNG+LIAKDV
Sbjct: 181 IRDDKKPTQKEIIIDVPLATSLVFRGFSWPIAAYRELVNGDLIAKDV 227

The following BLAST results are available for this feature:

BLAST of Bhi08G000781 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31330.1	6.4e-88	74.67	photosystem I subunit F	[more]

BLAST of Bhi08G000781 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHE8	9.0e-87	74.67	Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana...	[more]
P46486	5.0e-85	75.88	Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia O...	[more]
P12355	1.7e-80	72.61	Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea OX...	[more]
P13192	6.5e-77	68.37	Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare OX=4...	[more]
P12356	1.0e-50	52.13	Photosystem I reaction center subunit III, chloroplastic OS=Chlamydomonas reinha...	[more]

BLAST of Bhi08G000781 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M3X2	2.0e-113	95.98	PSI-F OS=Cucumis sativus OX=3659 GN=Csa_1G714680 PE=3 SV=1	[more]
A0A5D3E1S6	2.2e-112	95.13	PSI-F OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00570 PE=3 SV=...	[more]
A0A1S3C8V6	2.2e-112	95.13	PSI-F OS=Cucumis melo OX=3656 GN=LOC103498296 PE=3 SV=1	[more]
A0A6J1K487	6.0e-110	92.41	PSI-F OS=Cucurbita maxima OX=3661 GN=LOC111490506 PE=3 SV=1	[more]
A0A6J1GT12	1.1e-108	91.19	PSI-F OS=Cucurbita moschata OX=3662 GN=LOC111457171 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003666	Photosystem I PsaF, reaction centre subunit III	PFAM	PF02507	PSI_PsaF	coord: 58..223 e-value: 6.3E-81 score: 270.3
IPR003666	Photosystem I PsaF, reaction centre subunit III	PANTHER	PTHR34939	PHOTOSYSTEM I REACTION CENTER SUBUNIT III, CHLOROPLASTIC	coord: 1..224
IPR036577	Photosystem I PsaF, reaction centre subunit III superfamily	GENE3D	1.10.8.110	Photosystem I PsaF, reaction centre subunit III	coord: 71..224 e-value: 1.8E-73 score: 247.3
IPR036577	Photosystem I PsaF, reaction centre subunit III superfamily	SUPERFAMILY	81536	Subunit III of photosystem I reaction centre, PsaF	coord: 71..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..40

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000781	Bhi08M000781	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0015979	photosynthesis
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009538	photosystem I reaction center
cellular_component	GO:0009522	photosystem I