Bhi08G000475 (gene) Wax gourd (B227) v1

Overview
NameBhi08G000475
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr8: 18748543 .. 18749682 (-)
RNA-Seq ExpressionBhi08G000475
SyntenyBhi08G000475
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGCAAAAACTATCAAACTTTTAAAAATGAATTTACTACCACATTTACGAACAATTTAGAAAACTCTTATAATTTACAATGTATATCTCCACAATAAAATAGTTAACTGAATTCTTCAAAGAAAAAAATTAATTACCTAAATATTGATATAAAAATCTTAAGAAACATTATAAACGAAAGAGGGAAGAGATTGAAAATGCTAGCGCGTGAAGGCGTGAATAACAAGCGCGATGTAAATGAAAAGCGCCAAAGGAACCAAACTCACCAACGGCACGGCGGCCGCCACCGTCTCCCACCGCCGGCAATCAAAAGTCCCCAATTTTATCTGAACCAAATTCAGCAACGCGGCCACCAAAAACCCACACCCGAGAACCGACCCAACTGCAGACGCCACCATCCCCACGCGCAGTGCCGGCGCGTGGGCCACACCCTGCCCTCCGTCTCCGCCGTTGATGTTTCTGATGGCCTGCTTCAGCGCCGACGCCACCAGGCTGGAGAAGAGGAAGCAGCTGAAGGAGTACACATTGCAGGCGATGAGGCTCTGGGCGACAGAATCGGCGGCCGCGCAGGGGCCATCGTCGTCGTCGGTGAGAAGGTTGGCGGCGGGGTTGGCGGTGGGGTACCATGCGACGCCGAGGAAGACGGCGAAGGTGAAAAGAGAGTTGACGTTGACGATGCCGTCGAGGGCTAGGATGTGGATTCTGGTGGAGGTGGATCGCCGCCGTGGAACAACGGACATGGCGGTGGTGAGCGGCGGAGATGGGGGTGCTAAATCAAGACAAAATAAATAAATAAATAAGAAAAAAGAAATGTGAAGGGTATTATAATAAAAATGAAAAATGTAAAATTTGGTATGGTTTTAATTAGGGGGTGGGGTTGGTATTTTCTTGAAAGCAATTGAAAAGAGTGGCGTCCAAGTAAGAAACATGTCGGAATCTGAATACTGTTCCCCTCTTTTGTAATTTTTGAACCATTAATTCTTGTTTTAAAGCATAGGCCTAATCGAACCTTTTTCTAAGGTATCTCTCGTGGTTTAGGGCTTGTTTGGAAGTTTGAATGTAATGGGTTAGTAATTTTAAGCTCATATTTAGATAGAGAGTTTTGGATCCGTTCCTACTTTCTATTAGGAGCTGTTTGGG

mRNA sequence

TTTGCAAAAACTATCAAACTTTTAAAAATGAATTTACTACCACATTTACGAACAATTTAGAAAACTCTTATAATTTACAATGTATATCTCCACAATAAAATAGTTAACTGAATTCTTCAAAGAAAAAAATTAATTACCTAAATATTGATATAAAAATCTTAAGAAACATTATAAACGAAAGAGGGAAGAGATTGAAAATGCTAGCGCGTGAAGGCGTGAATAACAAGCGCGATGTAAATGAAAAGCGCCAAAGGAACCAAACTCACCAACGGCACGGCGGCCGCCACCGTCTCCCACCGCCGGCAATCAAAAGTCCCCAATTTTATCTGAACCAAATTCAGCAACGCGGCCACCAAAAACCCACACCCGAGAACCGACCCAACTGCAGACGCCACCATCCCCACGCGCAGTGCCGGCGCGTGGGCCACACCCTGCCCTCCGTCTCCGCCGTTGATGTTTCTGATGGCCTGCTTCAGCGCCGACGCCACCAGGCTGGAGAAGAGGAAGCAGCTGAAGGAGTACACATTGCAGGCGATGAGGCTCTGGGCGACAGAATCGGCGGCCGCGCAGGGGCCATCGTCGTCGTCGGTGAGAAGGTTGGCGGCGGGGTTGGCGGTGGGGTACCATGCGACGCCGAGGAAGACGGCGAAGGTGAAAAGAGAGTTGACGTTGACGATGCCGTCGAGGGCTAGGATGTGGATTCTGGTGGAGGTGGATCGCCGCCGTGGAACAACGGACATGGCGGTGGTGAGCGGCGGAGATGGGGGTGCTAAATCAAGACAAAATAAATAAATAAATAAGAAAAAAGAAATGTGAAGGGTATTATAATAAAAATGAAAAATGTAAAATTTGGTATGGTTTTAATTAGGGGGTGGGGTTGGTATTTTCTTGAAAGCAATTGAAAAGAGTGGCGTCCAAGTAAGAAACATGTCGGAATCTGAATACTGTTCCCCTCTTTTGTAATTTTTGAACCATTAATTCTTGTTTTAAAGCATAGGCCTAATCGAACCTTTTTCTAAGGTATCTCTCGTGGTTTAGGGCTTGTTTGGAAGTTTGAATGTAATGGGTTAGTAATTTTAAGCTCATATTTAGATAGAGAGTTTTGGATCCGTTCCTACTTTCTATTAGGAGCTGTTTGGG

Coding sequence (CDS)

ATGCTAGCGCGTGAAGGCGTGAATAACAAGCGCGATGTAAATGAAAAGCGCCAAAGGAACCAAACTCACCAACGGCACGGCGGCCGCCACCGTCTCCCACCGCCGGCAATCAAAAGTCCCCAATTTTATCTGAACCAAATTCAGCAACGCGGCCACCAAAAACCCACACCCGAGAACCGACCCAACTGCAGACGCCACCATCCCCACGCGCAGTGCCGGCGCGTGGGCCACACCCTGCCCTCCGTCTCCGCCGTTGATGTTTCTGATGGCCTGCTTCAGCGCCGACGCCACCAGGCTGGAGAAGAGGAAGCAGCTGAAGGAGTACACATTGCAGGCGATGAGGCTCTGGGCGACAGAATCGGCGGCCGCGCAGGGGCCATCGTCGTCGTCGGTGAGAAGGTTGGCGGCGGGGTTGGCGGTGGGGTACCATGCGACGCCGAGGAAGACGGCGAAGGTGAAAAGAGAGTTGACGTTGACGATGCCGTCGAGGGCTAG

Protein sequence

MLAREGVNNKRDVNEKRQRNQTHQRHGGRHRLPPPAIKSPQFYLNQIQQRGHQKPTPENRPNCRRHHPHAQCRRVGHTLPSVSAVDVSDGLLQRRRHQAGEEEAAEGVHIAGDEALGDRIGGRAGAIVVVGEKVGGGVGGGVPCDAEEDGEGEKRVDVDDAVEG
Homology
BLAST of Bhi08G000475 vs. ExPASy TrEMBL
Match: A5AQA1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_001112 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 4.0e-10
Identity = 54/125 (43.20%), Postives = 70/125 (56.00%), Query Frame = 0

Query: 35  PAIKSPQFYLNQIQQRGHQKPTPENRPNCRRHHPHAQCRRV-----GHTLPSVSAVDVSD 94
           PA +S +  LNQI QR HQ+   ++RP  R      +CRRV     G T    +A+   D
Sbjct: 4   PASQSAELNLNQIHQRKHQEDASKHRPRRRHQDSGPECRRVNMDSHGDTAHLTTALANPD 63

Query: 95  GLLQRRRHQAGEEEAAEGVHIAGDEALGDRIGGRAGAIVVVGEKVGGGVGGGVPCDAEED 154
           GLL+ + ++AGEEE AEGV + GDE L     G AG +    E   G V   VP +AEED
Sbjct: 64  GLLESKGNEAGEEEGAEGVDVEGDEILAHGHVGDAGRLGDAREG-DGRVSDWVPSEAEED 123

BLAST of Bhi08G000475 vs. ExPASy TrEMBL
Match: A0A6J5U396 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS17167 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 6.4e-08
Identity = 57/154 (37.01%), Postives = 80/154 (51.95%), Query Frame = 0

Query: 14  NEKRQRNQTHQRHGGRHRLPPPAIKSPQFYLNQIQQRGHQKPTPENRPNCRRHHPHAQCR 73
           +E+R  ++  +R  G   +  PA +SP+  L+ + +  HQ+  P NR   R  HP  +  
Sbjct: 21  DEERNGDEDDKRDHGGQSVGAPATQSPELDLHHVDESQHQEHAPANRTRTRDEHPDPEGG 80

Query: 74  RV--GHTLPSV--SAVDVSDGLLQRRRHQAGEEEAAEGVHIAGDEALGDRIGGRA-GAIV 133
            V  G  L  V        DGLL+    +AGEEE AEGVH+ G E L D   G A G +V
Sbjct: 81  AVDPGEELGRVVGRGSGDPDGLLEGDGDEAGEEEGAEGVHVEGHEVLRDAGPGAAGGGVV 140

Query: 134 VVGEKVGGGVGGGVPCDAEEDGEGEKRVDVDDAV 163
            + + V   V  G+P  A+EDG+GE+ V V D V
Sbjct: 141 YLNQGVVRVV--GIPGQADEDGQGEEGVHVHDTV 172

BLAST of Bhi08G000475 vs. ExPASy TrEMBL
Match: A0A3L6QR36 (Uncharacterized protein OS=Panicum miliaceum OX=4540 GN=C2845_PM04G06450 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 8.3e-08
Identity = 61/179 (34.08%), Postives = 89/179 (49.72%), Query Frame = 0

Query: 1   MLAREGVNNKRDVNEKRQRNQTHQRHGGRHRLPP--PAIKSPQFYLNQIQQRGHQKPTPE 60
           +LA EGV +  DV+E    ++  +R+ G     P   A ++ + +L+ + +R H++  P 
Sbjct: 68  LLAGEGVEDDADVDEHGGGDERDERYDGGPGGGPAGAAAEAAELHLHHVDERHHEEAAPG 127

Query: 61  NRPNCRRHHPHAQCRRVGHTLP-------------SVSAVDVSDGLLQRRRHQAGEEEAA 120
           +  +  R  P A+   V    P             +V   + +D LL+  R +AGEEEA 
Sbjct: 128 DGAHGGRQDPDAERGAVDPRRPAEDGGGAGAGGAAAVLRREGADELLEAERDEAGEEEAG 187

Query: 121 EGVHIAGDEALGDRIGGRAGAIVVVGEK-VGGGVGGGVPCDAEEDGEGEKRVDVDDAVE 164
           EG H+ GDE     + GRAG    VG       VGGG P  A E GEGE+RV V DAV+
Sbjct: 188 EGEHVEGDEVGLCAVPGRAGVARAVGAAGEPRAVGGGAPRQAHERGEGEERVHVHDAVQ 246

BLAST of Bhi08G000475 vs. ExPASy TrEMBL
Match: A0A6J5WLP7 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS16784 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.1e-07
Identity = 57/154 (37.01%), Postives = 80/154 (51.95%), Query Frame = 0

Query: 14  NEKRQRNQTHQRHGGRHRLPPPAIKSPQFYLNQIQQRGHQKPTPENRPNCRRHHPHAQCR 73
           +E+R  ++  +R  G   +  PA +SP+  L+ + +  HQ+  P NR   R  HP  +  
Sbjct: 21  DEERNGDEDDKRDHGGQSVGAPATQSPELDLHHVDECQHQEHAPANRTRTRDEHPDPEGG 80

Query: 74  RV--GHTLPSV--SAVDVSDGLLQRRRHQAGEEEAAEGVHIAGDEALGDRIGGRA-GAIV 133
            V  G  L  V        DGLL+    +AGEEE AEGVH+ G E L D   G A G +V
Sbjct: 81  AVDPGEELGRVVGRGSGDPDGLLEGDGDEAGEEEGAEGVHVEGHEVLRDAGPGAAGGGVV 140

Query: 134 VVGEKVGGGVGGGVPCDAEEDGEGEKRVDVDDAV 163
            + + V   V  G+P  A+EDG+GE+ V V D V
Sbjct: 141 YLNQGVVRVV--GIPGQADEDGQGEEGVHVHDTV 172

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A5AQA14.0e-1043.20Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_001112 PE=4 SV=1[more]
A0A6J5U3966.4e-0837.01Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS17167 PE=4 S... [more]
A0A3L6QR368.3e-0834.08Uncharacterized protein OS=Panicum miliaceum OX=4540 GN=C2845_PM04G06450 PE=4 SV... [more]
A0A6J5WLP71.1e-0737.01Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS16784 PE=... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..164

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M000475Bhi08M000475mRNA