Bhi08G000298 (gene) Wax gourd (B227) v1

Overview
NameBhi08G000298
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr8: 12368235 .. 12369156 (+)
RNA-Seq ExpressionBhi08G000298
SyntenyBhi08G000298
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGACTTCGTAAACAAGCTAAGCAAGGGAAATCCCCAATTTACCCATCTCCCTCTATAAAACCCCCCCTTTTATCTCACATTCTTTATCGACAATTTTCCTTCCCCAAAAAAGAAATATATATTTCCAGGCTCAGCCGACGCCCGCCATCCGCCGCCGTCGCCGCAGCTTCTCGCTGCCTTCTTACTCCTTCACTCTGCTCCAATCACTCAATTCGCCAATTCTCTCACCAATTTCACCGTTTCGGACCTCAATTTCAATGAATTCGAACAAAGAACGGTTGAAGCGGCCGTCGGAGCTGCCGCCGAGACGAGGTTTGATCAAGATCAGAATTTTCCGAAGCATCTTCAGAACAGTGAAATCGATACCGGAAGGATTCGCAAGAGGACGGAGAGAAGACGAAACCCTAACCTCGACTTCGACCACGCCGGCTCCAGGTACTAGCGGCTACAACTCGGAAGCTCAGTCCGAGTCATGAAGAAGAGTGAGCGAGTTCTTGACTCCGAATCATGAACTCGCTCACTAAGCTTCTGGTAAATTCTCGCTCGGGGTGTCTCGCTCTGTATGAAATCAGATGTAGTGTATTATTTTAGCATTTACTCTACACCATAACCTTAAGCTTTTCCCCTTTTTCTTCTCTTTTTATTCTTTTTGTTCTGATTAATTATTTTGTTTTATTTTCCTTCTTTTTGTTAAAATGTGTAATTCTTGAGACCCCTGTTTCTGTTACTTTAGGTTGAGATTATGATTAATTTCATAAATTGAAATCGAATTTGTTTACATATTTGATGGATCTTGGCTCTTGCCCTGTGCTCTGTGGATTTGGAAGTAGTTTGGTAATAATGTTATGAAACTTTTTGTTGGGAATCACTTCAGCAAAAAAGTAGCTTCCAAATTATAGCTGTGCTGAAAATAGAAACTTC

mRNA sequence

CAGACTTCGTAAACAAGCTAAGCAAGGGAAATCCCCAATTTACCCATCTCCCTCTATAAAACCCCCCCTTTTATCTCACATTCTTTATCGACAATTTTCCTTCCCCAAAAAAGAAATATATATTTCCAGGCTCAGCCGACGCCCGCCATCCGCCGCCGTCGCCGCAGCTTCTCGCTGCCTTCTTACTCCTTCACTCTGCTCCAATCACTCAATTCGCCAATTCTCTCACCAATTTCACCGTTTCGGACCTCAATTTCAATGAATTCGAACAAAGAACGGTTGAAGCGGCCGTCGGAGCTGCCGCCGAGACGAGGTTTGATCAAGATCAGAATTTTCCGAAGCATCTTCAGAACAGTGAAATCGATACCGGAAGGATTCGCAAGAGGACGGAGAGAAGACGAAACCCTAACCTCGACTTCGACCACGCCGGCTCCAGGTACTAGCGGCTACAACTCGGAAGCTCAGTCCGAGTCATGAAGAAGAGTGAGCGAGTTCTTGACTCCGAATCATGAACTCGCTCACTAAGCTTCTGGTAAATTCTCGCTCGGGGTGTCTCGCTCTGTATGAAATCAGATGTAGTGTATTATTTTAGCATTTACTCTACACCATAACCTTAAGCTTTTCCCCTTTTTCTTCTCTTTTTATTCTTTTTGTTCTGATTAATTATTTTGTTTTATTTTCCTTCTTTTTGTTAAAATGTGTAATTCTTGAGACCCCTGTTTCTGTTACTTTAGGTTGAGATTATGATTAATTTCATAAATTGAAATCGAATTTGTTTACATATTTGATGGATCTTGGCTCTTGCCCTGTGCTCTGTGGATTTGGAAGTAGTTTGGTAATAATGTTATGAAACTTTTTGTTGGGAATCACTTCAGCAAAAAAGTAGCTTCCAAATTATAGCTGTGCTGAAAATAGAAACTTC

Coding sequence (CDS)

ATGAATTCGAACAAAGAACGGTTGAAGCGGCCGTCGGAGCTGCCGCCGAGACGAGGTTTGATCAAGATCAGAATTTTCCGAAGCATCTTCAGAACAGTGAAATCGATACCGGAAGGATTCGCAAGAGGACGGAGAGAAGACGAAACCCTAACCTCGACTTCGACCACGCCGGCTCCAGGTACTAGCGGCTACAACTCGGAAGCTCAGTCCGAGTCATGA

Protein sequence

MNSNKERLKRPSELPPRRGLIKIRIFRSIFRTVKSIPEGFARGRREDETLTSTSTTPAPGTSGYNSEAQSES
Homology
[Close]
BLAST of Bhi08G000298 vs. ExPASy TrEMBL
Match: A0A5D3CDP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold74032G00010 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.3e-25
Identity = 65/72 (90.28%), Postives = 66/72 (91.67%), Query Frame = 0 

Query: 1  MNSNKERLKRPSELPPRRGLIKIRIFRSIFRTVKSIPEGFARGRREDETLTSTSTTPAPG 60
          MNSNKE  KR  E PPRRGLIKI+IFRSIFRTVKSIPEGFAR RREDETLTSTSTTPAPG
Sbjct: 1  MNSNKEPRKRMPEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETLTSTSTTPAPG 60

Query: 61 TSGYNSEAQSES 73
          TSGYNSEAQSES
Sbjct: 61 TSGYNSEAQSES 72

[Close]
BLAST of Bhi08G000298 vs. ExPASy TrEMBL
Match: A0A0A0LV79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077190 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.9e-21
Identity = 61/76 (80.26%), Postives = 64/76 (84.21%), Query Frame = 0 

Query: 1  MNSNKERLKRPSELPPRRGLIKIRIFRSIFRTVKSIPEGFARGRREDE----TLTSTSTT 60
          MNS K+  KR +E PPRRGLIKI+IFRSIFRTVKSIPEGFAR RREDE    T TSTSTT
Sbjct: 1  MNSIKDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETPTSTSTSTSTT 60

Query: 61 PAPGTSGYNSEAQSES 73
          PAPGTSGYNSEAQ ES
Sbjct: 61 PAPGTSGYNSEAQPES 76

The following BLAST results are available for this feature:
BLAST of Bhi08G000298 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi08G000298 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi08G000298 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CDP64.3e-2590.28Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LV794.9e-2180.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077190 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M000298Bhi08M000298mRNA