Bhi08G000285 (gene) Wax gourd (B227) v1

Overview
NameBhi08G000285
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionRetrotrans_gag domain-containing protein
Locationchr8: 11926819 .. 11927040 (-)
RNA-Seq ExpressionBhi08G000285
SyntenyBhi08G000285
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCCAGAACCATCCACGTTTAATGGTTCGAGAGATGCCAAGAAGCTGAAAAATTTCCTTTGGGACATCAAGGAATATTTCAAAGTCACAAAGATCACTGAGGAGGCACAAGTTGGCATTGCCAGCATGTACCTTGCCTCAGACACCAAACTGTGTGACGTACTCAGAAAGTTCACGATGAGAATAGAGGGAGAGCAAAGATCGAGACCTGAAAATCACTGA

mRNA sequence

ATTCCAGAACCATCCACGTTTAATGGTTCGAGAGATGCCAAGAAGCTGAAAAATTTCCTTTGGGACATCAAGGAATATTTCAAAGTCACAAAGATCACTGAGGAGGCACAAGTTGGCATTGCCAGCATGTACCTTGCCTCAGACACCAAACTGTGTGACGTACTCAGAAAGTTCACGATGAGAATAGAGGGAGAGCAAAGATCGAGACCTGAAAATCACTGA

Coding sequence (CDS)

ATTCCAGAACCATCCACGTTTAATGGTTCGAGAGATGCCAAGAAGCTGAAAAATTTCCTTTGGGACATCAAGGAATATTTCAAAGTCACAAAGATCACTGAGGAGGCACAAGTTGGCATTGCCAGCATGTACCTTGCCTCAGACACCAAACTGTGTGACGTACTCAGAAAGTTCACGATGAGAATAGAGGGAGAGCAAAGATCGAGACCTGAAAATCACTGA

Protein sequence

IPEPSTFNGSRDAKKLKNFLWDIKEYFKVTKITEEAQVGIASMYLASDTKLCDVLRKFTMRIEGEQRSRPENH
Homology
[Close]
BLAST of Bhi08G000285 vs. ExPASy TrEMBL
Match: A0A1Q3CN59 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_25140 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.8e-10
Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 1   IPEPSTFNGSRDAKKLKNFLWDIKEYFKVTKITEEAQVGIASMYLASDTKL 52
           +PEP  F+G RDAK+L+NFLWD++ YFK T++ EE +V I SMYLA D KL
Sbjct: 100 VPEPKQFSGKRDAKELENFLWDMESYFKATRVPEEEKVSITSMYLAGDAKL 150

[Close]
BLAST of Bhi08G000285 vs. ExPASy TrEMBL
Match: A0A1Q3CNE0 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_25139 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.8e-10
Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 1   IPEPSTFNGSRDAKKLKNFLWDIKEYFKVTKITEEAQVGIASMYLASDTKL 52
           +PEP  F+G RDAK+L+NFLWD++ YFK T++ EE +V I SMYLA D KL
Sbjct: 104 VPEPKQFSGKRDAKELENFLWDMESYFKATRVPEEEKVSITSMYLAGDAKL 154

[Close]
BLAST of Bhi08G000285 vs. ExPASy TrEMBL
Match: A0A1Q3CFQ0 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_22378 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.2e-10
Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 1   IPEPSTFNGSRDAKKLKNFLWDIKEYFKVTKITEEAQVGIASMYLASDTKL 52
           +PEP  F+G RDAK+L+NFLWD++ YF+ T++ EE +V I SMYLA D KL
Sbjct: 100 VPEPKQFSGKRDAKELENFLWDMESYFQATRVPEEEKVSITSMYLAGDAKL 150

[Close]
BLAST of Bhi08G000285 vs. ExPASy TrEMBL
Match: A0A5C7GTM9 (Retrotrans_gag domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027229 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.7e-10
Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 1   IPEPSTFNGSRDAKKLKNFLWDIKEYFKVTKITEEAQVGIASMYLASDTKL 52
           +PEP  FNGSR+AK+L+NFLWD+++YFK  +I +  QV I SMYL+ D KL
Sbjct: 207 VPEPKQFNGSRNAKELENFLWDMEQYFKAARIPDREQVSITSMYLSGDVKL 257

[Close]
BLAST of Bhi08G000285 vs. ExPASy TrEMBL
Match: A0A1Q3DJZ8 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_36140 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-09
Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 1   IPEPSTFNGSRDAKKLKNFLWDIKEYFKVTKITEEAQVGIASMYLASDTKL 52
           +PEP  F+G RDAK+L+NFLWD++ YF+ T++ EE +V I SMYLA D KL
Sbjct: 100 VPEPKQFSGKRDAKELENFLWDMELYFQATRVPEEEKVSITSMYLAGDAKL 150

The following BLAST results are available for this feature:
BLAST of Bhi08G000285 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi08G000285 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi08G000285 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1Q3CN591.8e-1060.78Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3... [more]
A0A1Q3CNE01.8e-1060.78Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3... [more]
A0A1Q3CFQ05.2e-1058.82Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3... [more]
A0A5C7GTM96.7e-1058.82Retrotrans_gag domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_... [more]
A0A1Q3DJZ81.1e-0958.82Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M000285Bhi08M000285mRNA